ClCG09G014580 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G014580
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	NADH-ubiquinone oxidoreductase chain 5
Location	CG_Chr09: 26684819 .. 26685959 (-)
RNA-Seq Expression	ClCG09G014580
Synteny	ClCG09G014580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGTTGTTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGTAGGTTTTGTTTCATATTTATTAATTCATTTATGGTTTACATGACTTCAGGCAGATAAAGCAGCTATAAAAGCTATGCATATCAATTGATTAGGTGATTTTGGATTAGCTCCTAGGATTTCGGGTTGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCGTGCTAGTGCCCCCAAAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAGGATCGCATACTTGGTCACCCGATACTATGGAGGGTCCTACTCTAGTATCTGCTTCGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCCCCTTTATTTGAATGCCCGTTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACGATGTCATTCCTTGTGGCAACCACGAGAATATTATAAAACGAACTAAAGAGGGTCATAGCTTATTTAACTTGCAGTCAATTAGGCTATATGATCTTTGTTTGTGGCATCTCTAACTATTCGGTTAGTGTCTTTCACTTAATGAATCATGCGTTTTTCAAAGCATTACTATTCTTGAGTGCAAGTTCGGTGATTCATGCCATGTTGGAGCAGGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACTATATCTTCTGTTAGATAAATAAATAGGGCACTAGGCCTTAGTGAGCCTGTGAGCAGGAGTTCCCCCACAAAAGTTGCTTTGACGGAGGGAAGTGGGCTTCATTCAATGGAATGTTTTGTTGGTTCAGCTCAAGGGGTCAGGTTTTCCGGTTTAGTGTGAAGGGAGGCGCTCTTTGTTGACCTTTTTTTTTTTTTTTTTTCATACTTCAGTTATTCGACTTTTGCCAAAGAAGGCTATTATGGCCTCTTGTTCCGCTACTGTTAGGTATAGATAAGCAGGACCTCTTGGTCAACAACATAAGAGAAGCGGGGATCCGCAAGAATCTTTTTCTATTCAGCCTCCTCCAACTCTAG

mRNA sequence

ATGCCAATGTTGTTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGATTTCGGGTTGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCGTGCTAGTGCCCCCAAAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAGGATCGCATACTTGGTCACCCGATACTATGGAGGGTCCTACTCTAGTATCTGCTTCGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCCCCTTTATTTGAATGCCCGTTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACGATGTCATTCCTTGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACTATATCTTCTGAGTTCCCCCACAAAAGTTGCTTTGACGGAGGGAAGTGGGCTTCATTCAATGGAATGTTTTGTTGGTTCAGCTCAAGGGGTCAGTTATTCGACTTTTGCCAAAGAAGGCTATTATGGCCTCTTGTTCCGCTACTGTTAGGTATAGATAAGCAGGACCTCTTGGTCAACAACATAAGAGAAGCGGGGATCCGCAAGAATCTTTTTCTATTCAGCCTCCTCCAACTCTAG

Coding sequence (CDS)

ATGCCAATGTTGTTGGATATAACTCTCTTCAATTATTCCTGGGATGGGAGGGAGATTTCGGGTTGTTTTACTCTCTTTCAAACAGCAGACTTTTCCACCATTTTTGCTCGTGCTAGTGCCCCCAAAAATTCTTGGATTTCTTGCAATATGAGATTGAATGCCATAACTCTGATTTGTATTTTACTTCTTATTGGTGCTATTGGGAAATCCACACAGATAGGATCGCATACTTGGTCACCCGATACTATGGAGGGTCCTACTCTAGTATCTGCTTCGACTCATGTAGCTATTATGGTAACAACTGGCATTTTCATGATAGCAAGGTGCCCCCCTTTATTTGAATGCCCGTTTACGGCTTTGATTGTTATTACTTCTGCAGGAGCTACGATGTCATTCCTTGCAAATGGTTTAGTTAAGATATGCCAAATTCCACCAAGTATACAAATGGAACTTAACCATACATGTCCCCCAACTATATCTTCTGAGTTCCCCCACAAAAGTTGCTTTGACGGAGGGAAGTGGGCTTCATTCAATGGAATGTTTTGTTGGTTCAGCTCAAGGGGTCAGTTATTCGACTTTTGCCAAAGAAGGCTATTATGGCCTCTTGTTCCGCTACTGTTAGGTATAGATAAGCAGGACCTCTTGGTCAACAACATAAGAGAAGCGGGGATCCGCAAGAATCTTTTTCTATTCAGCCTCCTCCAACTCTAG

Protein sequence

MPMLLDITLFNYSWDGREISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLANGLVKICQIPPSIQMELNHTCPPTISSEFPHKSCFDGGKWASFNGMFCWFSSRGQLFDFCQRRLLWPLVPLLLGIDKQDLLVNNIREAGIRKNLFLFSLLQL

Homology

[Close]

BLAST of ClCG09G014580 vs. NCBI nr
Match: YP_009941460.1 (NADH dehydrogenase subunit 5 [Fagus sylvatica] >QOC70518.1 NADH dehydrogenase subunit 5 [Fagus sylvatica] >QVG61317.1 NADH dehydrogenase subunit 5 [Fagus sylvatica] >QVG61373.1 NADH dehydrogenase subunit 5 [Fagus sylvatica])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 182 ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 242 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. NCBI nr
Match: ADL63522.1 (NADH dehydrogenase subunit 5, partial [Alnus incana subsp. rugosa])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 83  ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 142

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 143 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 198

[Close]

BLAST of ClCG09G014580 vs. NCBI nr
Match: KAE8009083.1 (hypothetical protein FH972_005537 [Carpinus fangiana])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 15  ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 74

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 75  SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 130

[Close]

BLAST of ClCG09G014580 vs. NCBI nr
Match: KAG6621686.1 (hypothetical protein I3842_Q010200 [Carya illinoinensis])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 178 ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 237

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 238 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 293

[Close]

BLAST of ClCG09G014580 vs. NCBI nr
Match: ADL63631.1 (NADH dehydrogenase subunit 5, partial [Juglans cinerea])

HSP 1 Score: 197.2 bits (500), Expect = 1.6e-46
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 101 ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 160

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 161 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 216

[Close]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot
Match: Q35639 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Pisum sativum OX=3888 GN=NDH5 PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.0e-44
Identity = 92/108 (85.19%), Postives = 95/108 (87.96%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 76  ISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 135

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSA 127
           SPD MEGPT VSA  H A MVT G+FMIARC PLFE P TALIVITSA
Sbjct: 136 SPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYPPTALIVITSA 183

[Close]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44
Identity = 93/116 (80.17%), Postives = 96/116 (82.76%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           I GCFTLFQT DFSTIFA ASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIG HTW
Sbjct: 182 ILGCFTLFQTVDFSTIFACASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGLHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
            PD MEGPT VSA  H A MVT G+FMIARC PLFE   TALIVIT AGA  SFLA
Sbjct: 242 LPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAGAMTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42
Identity = 90/116 (77.59%), Postives = 94/116 (81.03%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           I GCFTLFQT DFSTIFA AS P+NSWI CNMRLNAI+LICILL IGA+GKS QIG HTW
Sbjct: 182 ILGCFTLFQTVDFSTIFACASVPRNSWIFCNMRLNAISLICILLFIGAVGKSAQIGLHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
            PD MEGPT VSA  H A MVT G+FMIARC PLFE   TALIVITSAGA  SFLA
Sbjct: 242 LPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITSAGAMTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.9e-42
Identity = 90/116 (77.59%), Postives = 93/116 (80.17%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           I GCFTLFQT DFSTIFA ASAP+N WI CNMRLNAITLICILL IGA+GKS QIG HTW
Sbjct: 182 IFGCFTLFQTVDFSTIFACASAPRNEWIFCNMRLNAITLICILLFIGAVGKSAQIGLHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
            PD MEGPT VSA  H A MVT G+FMIARC PLFE   TALIVIT AGA  SFLA
Sbjct: 242 LPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPTALIVITFAGAMTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2)

HSP 1 Score: 146.4 bits (368), Expect = 4.2e-34
Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASA---PKNSWISCNMRLNAITLICILLLIGAIGKSTQIGS 78
           I GCFT+FQT DFSTIFA ASA   P + ++ CNM  +AIT+ICIL+ IGA+GKS QIG 
Sbjct: 182 IMGCFTIFQTVDFSTIFACASAFSEPHHYFLFCNMGFHAITVICILVFIGAVGKSAQIGL 241

Query: 79  HTWSPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           HTW PD MEGPT VSA  H A MVT G+FMIARC PLFE    ALIVIT  GA  SF A
Sbjct: 242 HTWLPDAMEGPTPVSALIHAATMVTAGVFMIARCSPLFEYSPNALIVITFVGAMTSFFA 300

[Close]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL
Match: A0A6A1WMY6 (NADH-ubiquinone oxidoreductase chain 5 OS=Morella rubra OX=262757 GN=CJ030_MR1G008482 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.7e-47
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 59  ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 118

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 119 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 174

[Close]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL
Match: A0A5N6QSG6 (Proton_antipo_M domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_005537 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.7e-47
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 15  ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 74

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 75  SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 130

[Close]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL
Match: A0A5N6L1B2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025327 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.7e-47
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 269 ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 328

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 329 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 384

[Close]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL
Match: E5DL54 (NADH dehydrogenase subunit 5 (Fragment) OS=Alnus incana subsp. rugosa OX=109070 GN=nad5 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.7e-47
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 83  ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 142

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 143 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 198

[Close]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL
Match: E5DLG3 (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Juglans cinerea OX=91214 GN=nad5 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 7.7e-47
Identity = 100/116 (86.21%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISGCFTLFQT DFSTIFARASAP+NSWISCNMRLNAITLICILLLIGA+GKS QIGSHTW
Sbjct: 101 ISGCFTLFQTVDFSTIFARASAPRNSWISCNMRLNAITLICILLLIGAVGKSAQIGSHTW 160

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVIT AGAT SFLA
Sbjct: 161 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITFAGATTSFLA 216

[Close]

BLAST of ClCG09G014580 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C )

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49
Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTW
Sbjct: 182 ISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAISLICILLLIGAVGKSAQIGSHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVITSAGAT SFLA
Sbjct: 242 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAGATTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A )

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49
Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTW
Sbjct: 182 ISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAISLICILLLIGAVGKSAQIGSHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVITSAGAT SFLA
Sbjct: 242 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAGATTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B )

HSP 1 Score: 193.4 bits (490), Expect = 2.1e-49
Identity = 99/116 (85.34%), Postives = 103/116 (88.79%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           ISG FTLFQT DFSTIFARASAP+NSWISCNMRLNAI+LICILLLIGA+GKS QIGSHTW
Sbjct: 182 ISGRFTLFQTVDFSTIFARASAPRNSWISCNMRLNAISLICILLLIGAVGKSAQIGSHTW 241

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAGATMSFLA 135
           SPD MEGPT VSAS H A MVT G+FMIARC PLFE P TALIVITSAGAT SFLA
Sbjct: 242 SPDAMEGPTPVSASIHAATMVTAGVFMIARCSPLFEYPPTALIVITSAGATTSFLA 297

[Close]

BLAST of ClCG09G014580 vs. TAIR 10
Match: ATCG01010.1 (NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein )

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-11
Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 0


Query: 19  ISGCFTLFQTADFSTIFARASAPKNSWISCNMRLNAITLICILLLIGAIGKSTQIGSHTW 78
           I G + +  + +F  +F       N  ++  + L  +TL   LL +G I KS Q   H W
Sbjct: 193 ILGLYWITGSFEFQDLF---EIFNNLILNNRVNLLFLTLCAFLLFVGPIAKSAQFPLHVW 252

Query: 79  SPDTMEGPTLVSASTHVAIMVTTGIFMIARCPPLFECPFTALIVITSAG 128
            PD MEGPT +SA  H A MV  GIF++AR  PLF    + + +I+  G
Sbjct: 253 LPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIG 298

The following BLAST results are available for this feature:

BLAST of ClCG09G014580 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009941460.1	1.6e-46	86.21	NADH dehydrogenase subunit 5 [Fagus sylvatica] >QOC70518.1 NADH dehydrogenase su...	[more]
ADL63522.1	1.6e-46	86.21	NADH dehydrogenase subunit 5, partial [Alnus incana subsp. rugosa]	[more]
KAE8009083.1	1.6e-46	86.21	hypothetical protein FH972_005537 [Carpinus fangiana]	[more]
KAG6621686.1	1.6e-46	86.21	hypothetical protein I3842_Q010200 [Carya illinoinensis]	[more]
ADL63631.1	1.6e-46	86.21	NADH dehydrogenase subunit 5, partial [Juglans cinerea]	[more]

BLAST of ClCG09G014580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q35639	2.0e-44	85.19	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Pisum sativum OX=3888 GN=ND...	[more]
P10330	4.5e-44	80.17	NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE...	[more]
P29388	1.1e-42	77.59	NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE...	[more]
Q37680	1.9e-42	77.59	NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 ...	[more]
P26849	4.2e-34	65.55	NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 P...	[more]

BLAST of ClCG09G014580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A1WMY6	7.7e-47	86.21	NADH-ubiquinone oxidoreductase chain 5 OS=Morella rubra OX=262757 GN=CJ030_MR1G0...	[more]
A0A5N6QSG6	7.7e-47	86.21	Proton_antipo_M domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH97...	[more]
A0A5N6L1B2	7.7e-47	86.21	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_025327 PE=3 SV=1	[more]
E5DL54	7.7e-47	86.21	NADH dehydrogenase subunit 5 (Fragment) OS=Alnus incana subsp. rugosa OX=109070 ...	[more]
E5DLG3	7.7e-47	86.21	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Juglans cinerea OX=91214 GN...	[more]

BLAST of ClCG09G014580 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00060.1	2.1e-49	85.34	NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	2.1e-49	85.34	NADH dehydrogenase 5A	[more]
ATMG00665.1	2.1e-49	85.34	NADH dehydrogenase 5B	[more]
ATCG01010.1	3.9e-11	36.70	NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01434	NADHDHGNASE5	coord: 87..113 score: 50.91 coord: 65..86 score: 60.59
None	No IPR available	PANTHER	PTHR42829:SF2	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 19..135
None	No IPR available	PANTHER	PTHR42829	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 5	coord: 19..135
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 28..133 e-value: 5.8E-13 score: 48.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G014580.1	ClCG09G014580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009536	plastid
cellular_component	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0015078	proton transmembrane transporter activity