ClCG09G014350 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G014350
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein RETICULATA-RELATED 1, chloroplastic
Location	CG_Chr09: 25483271 .. 25494415 (+)
RNA-Seq Expression	ClCG09G014350
Synteny	ClCG09G014350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCGCCACCTACTGCTTTCTCTCCTTTTCATTCTCTCTCTCTCTAACTTCCCCATGCCATAGAGAGATTGAGAATCCGAATTCAGAATTCAGAATCCTTCATCTTCTTCTTCCGTGATTCAAAATCGATGAGCATTTAGGTAACAAACGGGATTCGATTCAAGCTCATCCACAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAACTTCCCACCAACAAGCTATGGCTCCCTTCGATTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTGCTAGTGGTGAAGGCCTTCACAACTTCTTCTCCTTCTTCCTCTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGACTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACTCATCTGCGCCTGCTTCTTCCTCTTTGGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCCAAGCTTGATATGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGGTAAGTTCTTTGGTTTTGGTTTCGGTTTCGTTCATTTGGAATATGTCTATGCGTTGGTGTTCTTTCTGTATGGATTCTAGACGTGAACTTTTTCATAGTTGGCAAAGCAGCTTTACTTTGGAGAAATTTGAACGGATAACCAAAAAATTGGACCAAAACAAATTCGGATGCAATTAACAAAATGACCTCCCGCACCGCGGAAAAGCGACGGTCTCTCGCATCCTTTCTTCACTCACAATCACTCTCATTCTAACTTCACAGTTTTTGTTTCTTATATTTCTAGGACGCTTTCCTATCTCAGCCAACTGTTAACCATTGTTAAAGTATTTCATCACAATTGAAATACAGTTCTTCCTAACTTGGGGTTCTATTTCCATATGAGAGGCAATACGTTTTGTTCGCTTTATCCAGCAATTTTATTAGATTTTTAATCTTAGCCTGAGGATGGTTGAACAGTGGGTGTGCTAAGTTAGATGTATAGAACCACTATCAATTGCTTATGGTTGTTATTTTCGTGTTTGGGGTTTCTACAAAGAATGAAAGTTGTCTAGGAGAGGTGCAAGGGTTCGGTGGAGGTGCAGGACTATTTGGTTTATTTGTATATTTTTGGGGAAGAAACAAAAGATGTAATGGGGAATGACAATGCCAATGCCAGTTTTCCTTCCTTTTTGGAACAAGAGTCTATTGGATCACTGTTAATAAAAATGAATCCACTTCTCAATAGGTCAGAAATGGAATATCTGAATACTGAATCATATCTCTTGGAGAGAGATGTAGGACTATGATGGGTAGGCCCTAATTATTACTGGAGGTGTGAAAAAAAAGGAAAAAGAAAAAGTAAAGACCTTAAGAGAGAATGAGTTTGAATTAGTTACCTACTTAATTCAATGACAAACAGATATAAAAAGGTTTAACTATTGCCTTGTGAGATTAGTTGGGGCGAGCACAAGTATCTTGGGCTCTCACGTACATCATTGAAAAAAAACAATCACAGTTCACTTCTCGTGTTTGTTTGGTGGTGGACTTAATGTTTGGATAGATAGATGTAGTAATCTCTGTTCCTCACTAGTTGGTTGACTAAAAAATAGGTCATTAATGAAAACAAGCTAATATGAAATTGTTCCAAGTTGATGACTTCCTTGTGCTCTTGTCCAGTTACCTCCCCTCCAGCTCCCCCCTCCCCAACCTCTTCACGGCTTCCATACTCTTCCCTTGGCTCTACCTTTCTATTCCCAGCCCTTCACCTTGATGGGGTACAATAACTCACAATGCTCCATCACAATTGGTGGTGAATCTTTCTCAAGGATACAGTTGTAGCAAGGTCATTCCCTTCACCCTCCTCATAAAAATCAATTGTTGAAAGGTATTATTGACCTTCTTTTCTTGTCTATAAGATCCTCTCTGTTTCTTATTAAAAAAAATGGTATTAATATTTAATGGCCTAGAGGGGGGAAAAACATCTGTATAAAATATGAATCAACAAACTTCCATCCGGAGGGGGAAAACAGCCTAAAAGCCTAGAAATGAAAGTTCCCTTGCCTAAAATAGGAATCGGACAAAGCACACCCAAAGAGGGACACATTTTATATTTTTAGGATACAGTGATCCTTCCCTCTTCATATTCGGTGGAAACATTTTTTTGGGGTGCAAATGGCCTTTCTTCTATCCTATGGTAAGCCTCATTTTGAATCTAAAGGCTTCTAGCTTTGAAAGAATTCTTAGGTAGAGTCACTCCCCTCCAAGCAACTATTTTCGGATTAGGTTGTGCAATCTTTGGAAAAGCTTTTTCCAAAACTTTTTATGGAAAGGAGATAATGACAGCATGAGCTTACAACTTTTTAAATGGGAGAATGTCATGCTTCTAATTGAAGATAGAAGTCTTGGGATTTGTAGCTTATTAACAAGAATGAGCCTCTTCTTGCAAAATGAAATTGGCAGTACCTAAATGAGAATAAAGCCTTACGAAAGGAAGTCATCAAGGCTTTGCTACTTGCTTATCTTCATCTTTGGGCTCATCATCCTATAAATCATTTAGGGGCTGTTTGGGGAGCTGGAATGTAATAGGATTATTGGGAATCAGAGGTGTATTGTAATGCGTGAGGAATCGAGGATGAAATGAAAATGAGATCACGAAGCGTGAAAATGGTGGGAAATAGGGTTGGGTTGAAAATTGGCGGAACAGAATGAGTTTTGTATTATAAATCGAGCTCAAAATGATCAATTCAATCATTGATTTTGGATTACATTACAATACTATCCCATTACAGTCTCCCAAACACCCCCTTAAAGGGTCCGTGGATTTCTATTACGAGGCATAAGAAATTAATTTTTGATCAACTTGCCTATATGGTTAGGGATGGCACACATACCTCTTTTTGTAGTGTTGTTTTGCTGAATTGCTCCTCCATAGCACAAAGCTTCCCTTGGGTTTTTGATTTATCATTAAAAAGGTTTGCACTTGTTAAATATTTTTGGGTGGCAGATTTTCTAACAATTGGAATTTACATCTCAGAAGGAATCCCAATGATATTAAAATAAAAAAAAATAGACCTCTCTTATGCATCTTTTATCCTCCTTACAACAGACACAAGGCCACAAAATCTTGTGGAAGCTGCACAGTTGAATGGAGATTTTTCTACAAAATCTCTTTTGAAGGATTCATCACAGAACACGATTATTGAACATTCAAATGCCTACGTTGATGTTTGGAAAGGTTACTACCCTAAGAAGATCAACTTTTTTTATTTTTATTTTTTTATTGTAGGTAGCTTAGCTATAAGGTGATAAGCACCCATGATAAGCTCCAACAGAAGATGCCTTACATGTTTTCTTCTCCACAACGGTTTGTGTGTAAAAACAGCTCAGAGTTTCAAAGTCACCTCACCTCTTTTCTTTGTATCATGCAACTATGCATACAAGTTCTGGAACTTGGGTTTATGTAGTTTTGGTTGACTTCAGATTCAATGGATTAGAGCCCTTTTCCGTTTGATTTGGCTCCTTATGGAGTTTTGGTTTTTGTATGCCCCCAGTATTCTTTCTATTTTTCTTATTGGAACTTGGAATTATGGTTTCTCATTACATAGAAAAAGGGAAAAAAAAAAGGAGAAAAAGTCAGTTCTATCCAAGAATTATCTACTGAACTGTTTAGATAGTCTTTGTAGTTAAATTAAATATACAAAAAAATTGCTTTTTTTATTTCTTTTTTTGTGCTTCGTGCTCGAACTTGAAGAGCACTATTGCTCTCTACTATGCTTTATGTACCGTGCAATTCCTTTTGTTTTCTGTTGTGCCGTTATATTTTAGTTGGTTAGTGGAATTAATTATGTCTGCTATGTTGTTGGTTGTGTTATTTCACTTTCTCAATTCCAAATGTTTCATACTAAAATAATATTATAACAAATTGCAGACTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGATGACGATTACTATGATGAATTTGACGACGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGGTATACAATTTATTAGTGACAAATCTGTGTTGCTATTGTTTTTTATGGGCTCATTTTTAACACTAACTTTGTATTTGCTCTAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAATGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGTAGTGTTTTTTCCCCTTATTAACGTAATATTTTCTTGGAGGAGCAGGAAATATTTTATCTTTTTCTTTTTGTGTTAATTTATTTAGCCTTGAACTTTGGCTAGATGCTGACGGATTATTTATCCCAGGGTTTAGTTAGCTCGGCGCAAATGGTAAAATTTTTATCAATCAATGCCAGGCCAACTGCAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATTTCACGGGCATTTATTGGCAGGTGATTTTCTTTTAAAACCTCTTCTAGAATTTACAAGGCCTTTCATCTTAGGTACTTGACTTTAATTCTTTTATCAATTTACCATTCTTGGAGGGGTGACTTGGTAACTCACTTGCTATGAGATATTAATTCTCCATTAACCATAAGCGTCTTAACATTAGATCCTAAACCTAAATTTAAGCAATGAGATAGTGTAATGTCTAATTCTAGATTATCCATGAATTCTACAGGATATTTAGTCTTGCTGCTATTACATTTTAGGGATGGTGTCATATATGACAAAATGAGCTAAATTAATAACAAAAATAGCTAAACATAAAACTATTTGCAAATATAGCAAAATCTTAGTGAAAAGTCTAAAAACCCTTCAACACCACTAATACACAATTTCAATCCAAATCACTGTTACACAAATTTAGACAAAATCAGTTTCTTTCCAACTATTTGCATGTTTTCTCTCTTCTTTGTAATTTTTCTTCCATGCTTTTGTCTTTGTAGTTTCATCTTTGGTCCATTTAAATGAGTTGAACCGTTTTTTTATTAGCTTCATTTTTTTCTCAAGTCATTTTTCTTCAATGCATGTTTTACTTAACTAGTTTATATGTGAGTGTGTGTGTGTATATAGATATATATATATGTCAACTAAGTTCCTGATTAGTTCACAACCTTAGTTTAATAGTGCCCTTTGTAGTTTTTTTTTTAAGCCATTTCTTTATCAACTAAGTTTATTTTTTTTATTTATTTTTTATCAATTGAATTTCTTATTGCCATTTTCTATTTGACTCTATTCCTTTTTCCATCTTGTTTTCCCCCACGTTTCCTCGCTTGTTTCATTTGTCCTCATTGAAAAATTGTCGAGTGTCAATCATCATGGGTTGGCCTTAGGGCTAACCGATTGGTAATAGAAAACCATTTTCCTTCTGTACGTAACCGACTGACTGTTCATCAATTTGGTCAGGTTATGTCGGTTCTGAGTGAACGTTGAAGGTTGAATGTTCATTGGTAGGTATGATTGAAAAACTTGAAATAATAACTGACTAAGAAGTAGTAGAGAATAAAAGGGAGAGAGTAAAATGGGGAGGAGGGATGAGAGAGAGAGAACGCTACAACATAGAAGAAAAGAAGAAAGAAGAAGATAAAGCAATCAGATAAATGAGAGGGGGAGAATGGAAGAAAAAATGGGGAGAGAAAGAAAATAGAAAAGAGTGGAGAGAGGGAGGGAAACACGTTGGAAAGAGAGAAAAAAAGGAAACGTTATTTATTTATCTGTTTTTTTTTCTTTTGCAAAATGCTAGTTTCACAATTATCGAAGGAAAAATGAACATTTAATATTTTTTGTTTTGGAAAAAGCTGATTTCACACTAATCAAAGAGCCATTCTTGTGAATTGGTTTCCTTTTTGAGAAAAAGTTACGGTGATCAAGGTATTTAAAATGATGCTTTTTTATATGTTCGATTGGTCGGTCGGGAAAATGCTCTCCAGCCACTTTGACTGATCGAAATTTGGTTTTCTATTTTGAAACCAACATTGATCGAATCTCTCTTTAACTCAACCAATCAACGTCAATTTGGTTGGTTTGATTGGTTTTTCCGTTTAACTTATTCACCCTTAGTTGACCTAGTGGTGAATGGGCATGACTTTGATAAATGGCTAAGAAGACATTGGTTAAATTCATGGTGTCCATTTATCTAGGATTTAATATCATATGAGTTTCATTGACACTCAAATGTTGTAGGGTTAAGCGGGTTGTCCCATGGGATTAGTTGAGATGCGAGTAAATTGGTCCGAACATTATGGATATTAAGAAAAAGAAAAAAAAGGAAGAAAGTTGTCAAGTGTCAAATTTTTTTGGTTTGGTTGGGGATTTCTATTTCTTTCTCCTTTGGTTTTTGTGAGCCGTTTGTCACGGATGGAAATAACACCATTTCAAACAGCCACACAAACGCCCTTGACTCTCCCCCCATTGTCAAGGGAAGGTCGAGAGTGAAGGGCCAAGGTGTTGACAAAGCCGCTGCACGAGGATGCCATCGCATGCAGACGGGATGCAAGTGCCATCAGGCCACGCCCATGCCTCAAGTGTGTGCCTTCGACATAGCCGGACCCCCAGCTGAGTGCCTTAACAGACGCCCATGTACGTTGGCACATGGCGAAGTGGCTGCGCAACCAGCCATAAGTATGCGGCGTGCACGCGCAACTGCAAGGGTGAACAACGTGACGTGCCCGCATACGTGAAGTTGCCAGGCATGCAAGTTCGACGCATACCCACGATGCGTTCAGAGTGGGAACAACGCATGCGTGCCTCATAAGTGCCAGCAGTGTACGCATATCGTCGACGCCTCATGCGTACACTGCCTAGAGACCATGCGTCCAACGGCATCCTTCGACGCATGGAAAGTCCCAGACGGCTTGAGTAAGTCCCGGAAGATTCTAGACGCATGGGGACAAGGCCGGAGACCTCGACAAGCCTCTGGACACGTCTGGAGAGGGAAGACTCTGGAAGACACGGGAAGACTCTGGAATCATCCCATGCCCGGATGCCCGACACTGCAGGAAGACTCTGGAAGACACGAGAATGGCCTCGATTGTGCGTGCAAGGCCTCAACAGCACCAGAAGCCTCCAGAAGAACCTCGAAAGGGCGAGGATATGCTAGACACCTCCCGACAGTGCTAGAGAGTGCGATAGGCCTCTGGAGCGTGCTAGGCAATTCCAGAACCTTCTAAGACAGTCGGACATCCATGTAAATAGCTAGAAGACCCTCGATAGGTCTAGATAGTTCTAGTATGGGCCTAAGTCGGTGGAGTCTAAACTTGTACATAGGATTGCTACCCTTGTACATAGAAGAAAAGTCTAGATCCCTCTTGACCGACATAGTGAGTCGGTCATCATAGTTAAGTCGGCAAGCCCCCTCTATAAATATGAGGAGGGGCCCCCATTTGTAAACGCATAGACAGAGAGTTAGCAATACAAGCCAACTTCCAAAGCCTGTGCGTTCTCTCACCGGTTGGTGAAGCTCCCTTTCTTGCTCTCATTCACTCAAACTCTTAAGTCCTCCTTGTTAATCCACTTCCTTTGCCAATCTCACCCGATTGCGCTAGGGAGGAAACGATCCTTAAATTTCAATAGGCTTACTTGGCGTGACCTTTGACAGCAGGATCGTGCAAGTGCCGCGCGGTTGGTTAGGTTGAAACGCTAACCACGTGAAACGTTGTCTAATAGGGAGACGACGAAGATACTTCTCTTTTTTCCTTGATCGAGGGTTTTAACTTTAGAATTGGGAGAAGGGATGTTCGTGTTTGGAGCCTTACCCCTTTGGAGGACTTCTCTTGTAAGTCATTTTTCAGGATTTTATTGGATCCCTCTTCTCTTGTTGAGTGATTAAGATTCCAAAGAAAGTCAATAGGCTTTTGAGAAAGATGACTTCATTTGTGGGGCCTTTTTGTTGTATCCTATGTCAGAAGGCTGAAGAAAACCTGATCACCTTTTATGGGGGTGTTCGTTTGCAAGATTTATGTGGAATGATTTCTTTTTAGAAGTTTGATTTTATACTTGCTTGTCAGAGGGATGTTTGTTTGATGATCGGGGAGTTTCTCCTCTATCTGCCTTTCAAAGAGAAAGGTTGTTTTCTTTGGTTTGGGGGGTGTGCACGTTGTTCTTCTTCTTCTTCTTCTGGGCTTGATTTTTTATATGCCCTTGTGGTCTTTCATTTTTTTTTTTTCAATGAAAGAAGTTGTTTCTATCAAGAAAAAGAAAGAAAAAAAATAAAAACTCACAACATTTTAAGAAACAATTTCATCTGTCTATAGATTGAGTTTCTACTTTTATTGTCTCATATCATTGATAGACTTCAGTAAATGATAAGAGTTTGTCACTAATAGACTTGGCCTATGAATGTAGTCTATGAGTGATTGACAAACTCTTGTCATCAATTGAAGTCCATTAGTGATAGGAGTCTATTGCCAATTGAAGTCATGAATTTTGTGTCAATATTAGGAATCTATTATTGTCTAGTATTATGATTGAAGTATATCATTGATAGAATTCTCACTTATAGATTAATTAATAGTTTAGGGCTAGATTGTCACTAATAAACTTAATTGACGACTTATGTTTGCCTGTTGACTACTAATGCTGTTATTCTAATTGCAATCTATCAGGAATAGAATAGCCATCTATTATTAACAGTATTCAATTAGGATGCATGTAGTTTATTGGTGATGGTGATAGAACCCTACTACATGCACAAGCTTTATATTTTATTGCAATTCAATAGGTAGAGTAGAAAAAAAAAAAAAAAAAACCATGGTGCAACAATGCGACGATTTTTTCATAGCAATTATTGCAATTCTATTGTCCATCATGAGAAAAACTCGGGGAAGTTTATCCATGATTTCAAATTATTGCAAAAAACCAAAAAAAAAGAAAAAGAAAAATGTGAGTTAATTATTAATAACAAGCTATAACTGATAAATTCTCATAGTATATTCTCTTACTGGTCTACTAGGAGCAGAGAAAAATCTATTCCTTGATAAATTTACATAACAAATCAATGATAGACTTTTATCGATGATACATCTGCATGACAAATCAATTATTAATGAGAAAAAACTCTATTACTGATAGAATGATATTTCTATATAAAATAACAAGAAAATATCAGTGTATTAGTGATCTAACTTTAATATCTGCACAAGGTCTATCATCGATAGACTGAAACCACGTGTGAATTTTGGTCTATCACTGGTAGACTATGATGTGATAGACCAATATTGGTCTAGTTTCCTTCCTCTCTCTCTCTCTCTCTCTCCTATTATTATTTTTTTTTTAATTAGGAGGATATAAATTTTAAAATAATAAAATCAACAGTGTAATTTCTCTCCTGGTTACCAACTTGAATTTTTCTTGTACTGATCACTAGTTTGTTTTTGTGAGATACTGCATGCATTCTTTGAGAAAGAAATATATATTTTTCGAACTTTAACTTATTATACAATTGCACAGGATGTTAGCAGATCCTGCCTTTCTCTATAGGCTTCTTTTGGAGCAGGCTGCTACAATTGGCTGTTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGTTTGTTATGTACCCATACGGTTAAACGTTATTTCATTTCTATTTTTTTAATTTGCTTGGCTTACAAATTTTTGTACTGTTGTGGCTCCAGGATAAAGCAGGAATGGGATTTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTGCAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGAAGGAAAGGTACAGATTATTCCCATTTGGCAATAAAAATGCTAATCAAGTGCTCCATTCTTGACTTGGAATCGCGTTCATGTTTGCCCAGGTTATCTGTATCAGTTCCAACTGTGAGTACTAATGCTCTCGGCAATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGTTCGAACTGCTTTTCCCCCATTTGAAATATCTGTAGCATTTATGTGTAAAGCCTTAAACTTGCCATTTTGTTTCTTAAAACTCTTTGGTTTAACCACAATCTTATCCAAAAAGACATTATTGGATAAAGAATATTCAATAAAACCATTTTGGAATTGTATGTAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACAGACCTTCTGAAGACGTTAGTAGGTCTTCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAAACTGGTGCTGATTCCGTCTCTGAAGGTGAGTCAGTACCCAAAGCACGGAGGAAGAGAGTTGTTCGGAAAAAGGTAACAGCAGGTTCGTCGTGATCTTCTTATCCAGTCAATGCATTCTTCGTTACCCAGTTTTGCAGTTTGACGATAGATTTGGTGCAAAGTTGCCATATAAATCTTCGATAAAAGTTAGTTGCTAGGTGGATGATATTTTTTTCCCTTTGATGTAACCGGAGAAATTCATTTGAAACTGAAGCGATGCAATTATTGTAAAATCTCCCTTGTAGGGATTTTTTCTTTATTCTTCTGGTTGGTGTTTGAGTATTTAAAATACTCTTCTTCTGGTATTATCTCTTTTGTGAATAAGGTTATCAAAGTAGTCTCTGTATGAAACTACAACCTTGACCTTTGTATCAGATTGAGTTATGTTCATTTCTCCAATAGGAAAGAAGGACAAATCTTATATTCCAAACACAGCAAAATAAAAACCACTGGGGAACTTGGG

mRNA sequence

CCCTTCGCCACCTACTGCTTTCTCTCCTTTTCATTCTCTCTCTCTCTAACTTCCCCATGCCATAGAGAGATTGAGAATCCGAATTCAGAATTCAGAATCCTTCATCTTCTTCTTCCGTGATTCAAAATCGATGAGCATTTAGGTAACAAACGGGATTCGATTCAAGCTCATCCACAGCCGAATATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAACTTCCCACCAACAAGCTATGGCTCCCTTCGATTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTGCTAGTGGTGAAGGCCTTCACAACTTCTTCTCCTTCTTCCTCTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGACTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACTCATCTGCGCCTGCTTCTTCCTCTTTGGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCCAAGCTTGATATGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGTTACCTCCCCTCCAGCTCCCCCCTCCCCAACCTCTTCACGGCTTCCATACTCTTCCCTTGGCTCTACCTTTCTATTCCCAGCCCTTCACCTTGATGGGGTACAATAACTCACAATGCTCCATCACAATTGGTGACACAAGGCCACAAAATCTTGTGGAAGCTGCACAGTTGAATGGAGATTTTTCTACAAAATCTCTTTTGAAGGATTCATCACAGAACACGATTATTGAACATTCAAATGCCTACGTTGATACTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGATGACGATTACTATGATGAATTTGACGACGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAATGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCGCAAATGGTAAAATTTTTATCAATCAATGCCAGGCCAACTGCAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATTTCACGGGCATTTATTGGCAGGATGTTAGCAGATCCTGCCTTTCTCTATAGGCTTCTTTTGGAGCAGGCTGCTACAATTGGCTGTTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGATAAAGCAGGAATGGGATTTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTGCAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGAAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACTAATGCTCTCGGCAATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACAGACCTTCTGAAGACGTTAGTAGGTCTTCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAAACTGGTGCTGATTCCGTCTCTGAAGGTGAGTCAGTACCCAAAGCACGGAGGAAGAGAGTTGTTCGGAAAAAGGTAACAGCAGGTTCGTCGTGATCTTCTTATCCAGTCAATGCATTCTTCGTTACCCAGTTTTGCAGTTTGACGATAGATTTGGTGCAAAGTTGCCATATAAATCTTCGATAAAAGTTAGTTGCTAGGTGGATGATATTTTTTTCCCTTTGATGTAACCGGAGAAATTCATTTGAAACTGAAGCGATGCAATTATTGTAAAATCTCCCTTGTAGGGATTTTTTCTTTATTCTTCTGGTTGGTGTTTGAGTATTTAAAATACTCTTCTTCTGGTATTATCTCTTTTGTGAATAAGGTTATCAAAGTAGTCTCTGTATGAAACTACAACCTTGACCTTTGTATCAGATTGAGTTATGTTCATTTCTCCAATAGGAAAGAAGGACAAATCTTATATTCCAAACACAGCAAAATAAAAACCACTGGGGAACTTGGG

Coding sequence (CDS)

ATGTCTCATGCGGTGTTTCAAACGGCTCAAATCATGCCCATTAACACCCAACTTCCCACCAACAAGCTATGGCTCCCTTCGATTGTTAAGCTCGGTCCCTGCCACCGAAACAGAGCAGTGCTAGTGGTGAAGGCCTTCACAACTTCTTCTCCTTCTTCCTCTCCTTCTTCTTCTTCTTCTTCTTCGGGTGTTTCATATGGGGACTCCATTGCTCTGCTGGAGCGTTGCTTTGCAAACTCATCTGCGCCTGCTTCTTCCTCTTTGGGCCCTGTTATGAAAGGCCAATATGGTGCCCTTGGTTCTGTAACCTTGGAGAAATCCAAGCTTGATATGTCTCAGAAGCAGTCCAAGTCTAGCCCCGAGTTACCTCCCCTCCAGCTCCCCCCTCCCCAACCTCTTCACGGCTTCCATACTCTTCCCTTGGCTCTACCTTTCTATTCCCAGCCCTTCACCTTGATGGGGTACAATAACTCACAATGCTCCATCACAATTGGTGACACAAGGCCACAAAATCTTGTGGAAGCTGCACAGTTGAATGGAGATTTTTCTACAAAATCTCTTTTGAAGGATTCATCACAGAACACGATTATTGAACATTCAAATGCCTACGTTGATACTGCAATTGGGGGAGGTGGTGGAGATATTGGCAAGAAAATTAATCATGGTGGTGGTGATGGTGGAGACGATGATGGTGATGATGACGATTACTATGATGAATTTGACGACGGGGATGAGGGAGATGAGGGTGGCCTGTTCCGGAGAAGGAAATTTCTTGAAGAGCTTTTTGATCGTAAATTTGTAGATGCAGTATTAAATGAGTGGCAGAAGACAGTGATGGATTTGCCTGCTGGATTTCGTCAGGCTTATGAAATGGGTTTAGTTAGCTCGGCGCAAATGGTAAAATTTTTATCAATCAATGCCAGGCCAACTGCAACTCGGTTCATTTCACGAACACTTCCTCAAGGAATTTCACGGGCATTTATTGGCAGGATGTTAGCAGATCCTGCCTTTCTCTATAGGCTTCTTTTGGAGCAGGCTGCTACAATTGGCTGTTCAGCTTGGTGGGAAATAAAGAATCGCAAGGATAGGATAAAGCAGGAATGGGATTTGGCGCTCATTAATGTTCTCACAGTTACTGCCTGCAATGCTATAGTTGTTTGGTCACTTGCTCCTTGTCGTTCATATGGAAATACATTCCGATTTGATTTGCAAAATACATTACAGAAGCTTCCCAATAATATATTTGAAAAAAGTTATCCTATGAGGGAATTTGACTTGCAAAAGAGAATCCATTCGTTCTTCTACAAAGCTGCAGAGTTGTGCATGGTCGGTATAACTGCAGGAGCAGCTCAAGGCGCTTTGTCCAATTTTCTCTCTAGTAAAAAGAAGGAAAGGTTATCTGTATCAGTTCCAACTGTGAGTACTAATGCTCTCGGCAATGGTGCTTTTCTCGGGCTCTATGCAAATCTCCGGTATCAGTTATTATGCGGTTTTGACAGAGCAATGATCAATCATTTTGATGTTATTGGAGTGGCTCTGTTTTTCAGCTCTGCATTGAGGGTTTTGAATGTGCAACTAGGAGAAAGATCAAGACTGGCTTGGCTTGGAGTGGAGGCAGACCCACTGGTTCAGTCAAGTGATCTCTTGAAGAAGGTTTACAACAGACCTTCTGAAGACGTTAGTAGGTCTTCTTCCTCGAAATGGTTTATTTCAAAGAATGCCATCATTTCTGGCCTTGGACTTCTTGGTCTCAAACAAACTGGTGCTGATTCCGTCTCTGAAGGTGAGTCAGTACCCAAAGCACGGAGGAAGAGAGTTGTTCGGAAAAAGGTAACAGCAGGTTCGTCGTGA

Protein sequence

MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSSSSGVSYGDSIALLERCFANSSAPASSSLGPVMKGQYGALGSVTLEKSKLDMSQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQNLVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVPTVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADSVSEGESVPKARRKRVVRKKVTAGSS

Homology

[Close]

BLAST of ClCG09G014350 vs. NCBI nr
Match: XP_038888281.1 (protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 921.0 bits (2379), Expect = 5.4e-264
Identity = 505/625 (80.80%), Postives = 515/625 (82.40%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPINTQLPTNKLWLPS VKLGPCHRNRAVLVVKAFTTS PS   SSSSS
Sbjct: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSAVKLGPCHRNRAVLVVKAFTTSPPS---SSSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA---------SSSLGPVMKGQYGALGSVTLEKSKLDM 120
           SSGVSY DSIALLERCF   SAPA         SSS GPVMKGQYGALGSVTLEKSKLD+
Sbjct: 61  SSGVSYVDSIALLERCFGAPSAPAGCDPLIAISSSSFGPVMKGQYGALGSVTLEKSKLDL 120

Query: 121 SQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQN 180
           SQKQSKSSPE                                                  
Sbjct: 121 SQKQSKSSPE-------------------------------------------------- 180

Query: 181 LVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDG 240
                                             TAIGGGGGDIGKKINHGGGDGGDDDG
Sbjct: 181 ----------------------------------TAIGGGGGDIGKKINHGGGDGGDDDG 240

Query: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEM 300
           DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAG RQAYEM
Sbjct: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGLRQAYEM 300

Query: 301 GLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360
           GLVSSAQMVKFLS+NARPT TRFISR LPQGISRAFIGRM+ADPAFLYRLLLEQA TIGC
Sbjct: 301 GLVSSAQMVKFLSMNARPTTTRFISRALPQGISRAFIGRMIADPAFLYRLLLEQATTIGC 360

Query: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420
           SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP
Sbjct: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420

Query: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVP 480
           NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKK+ERLSVSVP
Sbjct: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKQERLSVSVP 480

Query: 481 TVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSR 540
           TVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVI VALFFSSALRVLNVQLGERSR
Sbjct: 481 TVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIEVALFFSSALRVLNVQLGERSR 537

Query: 541 LAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADS 600
           LAWLGVEADPLVQSS+LLKKVYNRPSEDVS+ SSSKWFISKNAIISGLGLLGLKQTGADS
Sbjct: 541 LAWLGVEADPLVQSSELLKKVYNRPSEDVSK-SSSKWFISKNAIISGLGLLGLKQTGADS 537

Query: 601 VSEGESVPKARRKRVVRKKVTAGSS 617
           +SEGESVPKARRKR+VR+KVTAGSS
Sbjct: 601 ISEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of ClCG09G014350 vs. NCBI nr
Match: XP_008449416.1 (PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo])

HSP 1 Score: 905.6 bits (2339), Expect = 2.4e-259
Identity = 493/625 (78.88%), Postives = 513/625 (82.08%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPINTQL TNKLWLPS+VKLGP +RNRAVLVVKAFTTSSPS   S SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPS---SPSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA---------SSSLGPVMKGQYGALGSVTLEKSKLDM 120
           SSGV YGDSIA LERCF   SAPA         SSS GPVMKGQ+GALGSVTLEKSKLD+
Sbjct: 61  SSGVPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDL 120

Query: 121 SQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQN 180
           SQKQSKSSPE                                                  
Sbjct: 121 SQKQSKSSPE-------------------------------------------------- 180

Query: 181 LVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDG 240
                                             TAIGGGGGDIGKKINHGGGDGGDDDG
Sbjct: 181 ----------------------------------TAIGGGGGDIGKKINHGGGDGGDDDG 240

Query: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEM 300
           DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM
Sbjct: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM 300

Query: 301 GLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360
           GLVSSAQMV+FL++NARPT TRFISR LPQGISRAFIGRMLADPAFLYRLLLEQAATIGC
Sbjct: 301 GLVSSAQMVRFLAVNARPTTTRFISRALPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360

Query: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420
           SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP
Sbjct: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420

Query: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVP 480
           NNIFEKSYPMREFDLQKRIHSFFYKAAELC+VGITAGAAQG LSNFLSSKK+ERLSVSVP
Sbjct: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCLVGITAGAAQGVLSNFLSSKKQERLSVSVP 480

Query: 481 TVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSR 540
           TVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSR
Sbjct: 481 TVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSR 537

Query: 541 LAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADS 600
           LAWLG+EADPLVQS +LL+KVYNRPSED+++ SSSKWFISKNAIISGLGLLGLKQ+GADS
Sbjct: 541 LAWLGIEADPLVQSRELLQKVYNRPSEDINQ-SSSKWFISKNAIISGLGLLGLKQSGADS 537

Query: 601 VSEGESVPKARRKRVVRKKVTAGSS 617
           VSEGESVPKARRKR+VR+KVTAGSS
Sbjct: 601 VSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of ClCG09G014350 vs. NCBI nr
Match: XP_022155012.1 (protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia])

HSP 1 Score: 887.9 bits (2293), Expect = 5.1e-254
Identity = 492/624 (78.85%), Postives = 509/624 (81.57%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWL---PSIVKLGPCH--RNRAVLVVKAFTTSSPSSSP 60
           M+HAVFQTAQIMPINTQLPT KLWL   P +VKLGP    R++ VLVVKAFTTSSP    
Sbjct: 1   MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP---- 60

Query: 61  SSSSSSSGVSYGDSIALLERCFANSSAPA---SSSLGPVMKGQYGALGSVTLEKSKLDMS 120
             SSSSS VS GDSIALLERCF   SAPA   SSSLGPVMKGQYG+LGSVTLEKSKLD+S
Sbjct: 61  --SSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGSLGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQNL 180
           QKQSKSSPE                                                   
Sbjct: 121 QKQSKSSPE--------------------------------------------------- 180

Query: 181 VEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDGD 240
                                            TAIGGGGGDIGKKINHGGGDGGDDDGD
Sbjct: 181 ---------------------------------TAIGGGGGDIGKKINHGGGDGGDDDGD 240

Query: 241 DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMG 300
           DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEMG
Sbjct: 241 DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMG 300

Query: 301 LVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS 360
           LVSSAQMVKFL+INARPT TRFISR+LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS
Sbjct: 301 LVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS 360

Query: 361 AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN 420
           AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN
Sbjct: 361 AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN 420

Query: 421 NIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVPT 480
           NIFEKSYP+REFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLS KK+ERLSVSVPT
Sbjct: 421 NIFEKSYPLREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSRKKEERLSVSVPT 480

Query: 481 VSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRL 540
           VSTNALG GAFLGLYANLRYQLLCGFDRAMI+HFDVIGVALFFSSALRVLNVQLGERSRL
Sbjct: 481 VSTNALGYGAFLGLYANLRYQLLCGFDRAMISHFDVIGVALFFSSALRVLNVQLGERSRL 533

Query: 541 AWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADSV 600
           AWLGVEADPLVQSSDLLK+VYNRPSE V+   SSKWFISKNAIISGLGLLG+KQTGADSV
Sbjct: 541 AWLGVEADPLVQSSDLLKQVYNRPSEGVN-EPSSKWFISKNAIISGLGLLGVKQTGADSV 533

Query: 601 SEGESVPKARRKRVVRKKVTAGSS 617
           SEGES+PKARRKR+VRKKVTAGSS
Sbjct: 601 SEGESIPKARRKRIVRKKVTAGSS 533

[Close]

BLAST of ClCG09G014350 vs. NCBI nr
Match: XP_022989621.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 887.1 bits (2291), Expect = 8.7e-254
Identity = 488/626 (77.96%), Postives = 507/626 (80.99%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPI+TQLPT KLWLP  VKLG C R R VLVVKA TT SP   PS SSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLVVKAVTTFSP--PPSHSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA----------SSSLGPVMKGQYGALGSVTLEKSKLD 120
           SS  S G+SIALLERCFA  S+PA          SSS GPVMKG+YGALG+VTLEKSKLD
Sbjct: 61  SSDDSDGNSIALLERCFAAPSSPAGSDSSLTATSSSSSGPVMKGKYGALGAVTLEKSKLD 120

Query: 121 MSQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQ 180
           MSQKQ++SSPE                                                 
Sbjct: 121 MSQKQTRSSPE------------------------------------------------- 180

Query: 181 NLVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDD 240
                                              TAIGGGGGDIGKKINHGGGDGGDDD
Sbjct: 181 -----------------------------------TAIGGGGGDIGKKINHGGGDGGDDD 240

Query: 241 GDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYE 300
           GDDDDYYDEFDDGDEGDEGGLFRRR+FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYE
Sbjct: 241 GDDDDYYDEFDDGDEGDEGGLFRRRQFLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYE 300

Query: 301 MGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIG 360
           MGLVSSAQMVKFL+INARPT TRFISRTLPQGISR+FIGRMLADPAFLYRLLLEQAATIG
Sbjct: 301 MGLVSSAQMVKFLAINARPTTTRFISRTLPQGISRSFIGRMLADPAFLYRLLLEQAATIG 360

Query: 361 CSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420
           C+AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL
Sbjct: 361 CTAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420

Query: 421 PNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSV 480
           PNN+FEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFL+ KKK+RLSVSV
Sbjct: 421 PNNLFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLAKKKKDRLSVSV 480

Query: 481 PTVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 540
           PTVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS
Sbjct: 481 PTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 539

Query: 541 RLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGAD 600
           RLAWLGVEADPLVQSSDLL+KVYNR SEDV+R SSSKWFISKNAI SGLGLLGLKQTGAD
Sbjct: 541 RLAWLGVEADPLVQSSDLLQKVYNRRSEDVNR-SSSKWFISKNAITSGLGLLGLKQTGAD 539

Query: 601 SVSEGESVPKARRKRVVRKKVTAGSS 617
           SVSEGES+PKARRKR+VRKKVTAGSS
Sbjct: 601 SVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of ClCG09G014350 vs. NCBI nr
Match: XP_004140107.1 (protein RETICULATA-RELATED 1, chloroplastic [Cucumis sativus] >KGN47925.1 hypothetical protein Csa_003414 [Cucumis sativus])

HSP 1 Score: 885.2 bits (2286), Expect = 3.3e-253
Identity = 481/625 (76.96%), Postives = 506/625 (80.96%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPINTQL TN LWLP++VKLGP +RNRAVLVVKAFT S P      SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPP------SSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA---------SSSLGPVMKGQYGALGSVTLEKSKLDM 120
           SSGVSYGDSI+ LERCF  S  PA         SSS GPVMKG+YGA G+VTLEKSKLD+
Sbjct: 61  SSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDL 120

Query: 121 SQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQN 180
           SQKQSKSSPEL                                                 
Sbjct: 121 SQKQSKSSPEL------------------------------------------------- 180

Query: 181 LVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDG 240
                                              AIGGGGGDIGKKINHGGGDGGDDDG
Sbjct: 181 -----------------------------------AIGGGGGDIGKKINHGGGDGGDDDG 240

Query: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEM 300
           DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM
Sbjct: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM 300

Query: 301 GLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360
           GLVSSAQMV+FL++NARPT TRFISR+LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC
Sbjct: 301 GLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGC 360

Query: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420
           +AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP
Sbjct: 361 AAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420

Query: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVP 480
           NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQG LSNFLSSKK+ERLSVSVP
Sbjct: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVP 480

Query: 481 TVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSR 540
           TVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSR
Sbjct: 481 TVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSR 534

Query: 541 LAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADS 600
           LAWLG+EADPLVQS +LL+KVYNRPS+ VS+ SSSKWFISKNAIISGLGLLGLKQ+G DS
Sbjct: 541 LAWLGIEADPLVQSRELLEKVYNRPSQGVSQ-SSSKWFISKNAIISGLGLLGLKQSGVDS 534

Query: 601 VSEGESVPKARRKRVVRKKVTAGSS 617
           VSEGESVPKARRKR+VR+KVTAGSS
Sbjct: 601 VSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of ClCG09G014350 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 5.5e-17
Identity = 92/339 (27.14%), Postives = 153/339 (45.13%), Query Frame = 0


Query: 209 GGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVD 268
           GGG G  G     GGG GGD +GDD +  DE D  +E + G + +              +
Sbjct: 112 GGGNGGNG----DGGGGGGDGEGDDGE--DEADKAEEKEFGPILK-------------FE 171

Query: 269 AVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFI 328
            V+ E ++  + LP    +A +   +    ++++L +        F+ R+          
Sbjct: 172 EVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAM-----LR 231

Query: 329 GRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWS 388
            RMLADP+FL+++  E A    C+ + E++ R +    E++L   ++L     +  +V  
Sbjct: 232 NRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGL 291

Query: 389 LAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCM 448
           LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK      
Sbjct: 292 LAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGS 351

Query: 449 VGITAGAAQGALSNFL----SSKKKERLSVSVPTVSTNALGNGAFLGLYANLRYQLLCGF 508
           VG   G     ++N +     S KK    V +P +  +A   G FLGL +N RYQ++ G 
Sbjct: 352 VGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGL 411

Query: 509 DRAMINHF---DVIGVALFFSSALRVLNVQLGERSRLAW 535
           +R +        +  VA+ F+  +R  N   G    + W
Sbjct: 412 ERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDW 426

[Close]

BLAST of ClCG09G014350 vs. ExPASy Swiss-Prot
Match: Q8RWG3 (Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER6 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.1e-17
Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 262 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQ 321
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR---- 477

Query: 322 GISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 381
              + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 478 --FQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 382 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 441
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 442 FYKAAELCMVGITAGAAQGALSNFLSSKKK----ERLSVSVPTVS---TNALGNGAFLGL 498
                +L  VG+ +  A    SN L+  +K    E +    P  S     A+  G FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

[Close]

BLAST of ClCG09G014350 vs. ExPASy Swiss-Prot
Match: Q9SIY5 (Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER5 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.0e-16
Identity = 86/338 (25.44%), Postives = 147/338 (43.49%), Query Frame = 0


Query: 262 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQ 321
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 322 GISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 381
              + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 382 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 441
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 442 FYKAAELCMVGITAGAAQGALSNFLSSKK---KERLSVS-----VPTVSTNALGNGAFLG 501
                +L  VG+ +  A    SN L + +   K  L V       P + T AL  G +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 502 LYANLRYQLLCGFDRAMINHFDVIG----VALFFSSALRVLNVQLGERSRLAWL------ 561
             +N+RYQ++ G     I+  D +     +    S  +RV N   G +    W+      
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 562 GVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKN 574
           G++    V +S+ + +V ++ + + S +  +     KN
Sbjct: 709 GLQTQKSVTTSNQIPEVASQSTVEYSTTEEASMDDLKN 734

[Close]

BLAST of ClCG09G014350 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 8.7e-15
Identity = 83/337 (24.63%), Postives = 148/337 (43.92%), Query Frame = 0


Query: 177 QLNGDFSTKSLLKDSSQNTIIEH-SNAYVDTAIGGG-GGDIGKKINHGGGDGGDDDGDDD 236
           Q+ G+     L KD+ +N   +   N  +D  +G G  G  G     GGG+GG+ DG+ +
Sbjct: 79  QIKGEGDNSILGKDNVRNLGTDQLENLDIDGNVGDGFNGSDGNGGGGGGGNGGEGDGEGE 138

Query: 237 DYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLV 296
           DY       +E + G + +              + V+ E +     LP+   +A +   +
Sbjct: 139 DY-------EEKEFGPILK-------------FEEVMKETEARGATLPSDMLEAAKNYGI 198

Query: 297 SSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCSAW 356
               ++++L + +      F  R+           RMLADP+FL+++  E      C+  
Sbjct: 199 RKVLLLRYLDLQSSAGLLGFAIRSWAM-----LRNRMLADPSFLFKIGAEIVIDSCCATV 258

Query: 357 WEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNT-----FRFDLQNTLQK 416
            E++ R      E++L + ++L  T  N  +V  LAP   +G       F   +      
Sbjct: 259 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFAYNA 318

Query: 417 LPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKK----KER 476
           LP+++FE   P   F  Q+R+ ++FYK      VG   G     ++N + + K    K  
Sbjct: 319 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKSE 378

Query: 477 LSVSVPTVSTNALGNGAFLGLYANLRYQLLCGFDRAM 503
            ++ VP +  +A   G FL + +N RYQ++ G +R +
Sbjct: 379 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVV 390

[Close]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL
Match: A0A1S3BMX1 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491309 PE=3 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 1.1e-259
Identity = 493/625 (78.88%), Postives = 513/625 (82.08%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPINTQL TNKLWLPS+VKLGP +RNRAVLVVKAFTTSSPS   S SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNKLWLPSVVKLGPSYRNRAVLVVKAFTTSSPS---SPSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA---------SSSLGPVMKGQYGALGSVTLEKSKLDM 120
           SSGV YGDSIA LERCF   SAPA         SSS GPVMKGQ+GALGSVTLEKSKLD+
Sbjct: 61  SSGVPYGDSIAFLERCFETPSAPAGSDPFLAISSSSFGPVMKGQFGALGSVTLEKSKLDL 120

Query: 121 SQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQN 180
           SQKQSKSSPE                                                  
Sbjct: 121 SQKQSKSSPE-------------------------------------------------- 180

Query: 181 LVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDG 240
                                             TAIGGGGGDIGKKINHGGGDGGDDDG
Sbjct: 181 ----------------------------------TAIGGGGGDIGKKINHGGGDGGDDDG 240

Query: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEM 300
           DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM
Sbjct: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM 300

Query: 301 GLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360
           GLVSSAQMV+FL++NARPT TRFISR LPQGISRAFIGRMLADPAFLYRLLLEQAATIGC
Sbjct: 301 GLVSSAQMVRFLAVNARPTTTRFISRALPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360

Query: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420
           SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP
Sbjct: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420

Query: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVP 480
           NNIFEKSYPMREFDLQKRIHSFFYKAAELC+VGITAGAAQG LSNFLSSKK+ERLSVSVP
Sbjct: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCLVGITAGAAQGVLSNFLSSKKQERLSVSVP 480

Query: 481 TVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSR 540
           TVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSR
Sbjct: 481 TVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSR 537

Query: 541 LAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADS 600
           LAWLG+EADPLVQS +LL+KVYNRPSED+++ SSSKWFISKNAIISGLGLLGLKQ+GADS
Sbjct: 541 LAWLGIEADPLVQSRELLQKVYNRPSEDINQ-SSSKWFISKNAIISGLGLLGLKQSGADS 537

Query: 601 VSEGESVPKARRKRVVRKKVTAGSS 617
           VSEGESVPKARRKR+VR+KVTAGSS
Sbjct: 601 VSEGESVPKARRKRIVRRKVTAGSS 537

[Close]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL
Match: A0A6J1DN85 (protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022154 PE=3 SV=1)

HSP 1 Score: 887.9 bits (2293), Expect = 2.5e-254
Identity = 492/624 (78.85%), Postives = 509/624 (81.57%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWL---PSIVKLGPCH--RNRAVLVVKAFTTSSPSSSP 60
           M+HAVFQTAQIMPINTQLPT KLWL   P +VKLGP    R++ VLVVKAFTTSSP    
Sbjct: 1   MAHAVFQTAQIMPINTQLPTTKLWLPPPPPLVKLGPSQTPRSKPVLVVKAFTTSSP---- 60

Query: 61  SSSSSSSGVSYGDSIALLERCFANSSAPA---SSSLGPVMKGQYGALGSVTLEKSKLDMS 120
             SSSSS VS GDSIALLERCF   SAPA   SSSLGPVMKGQYG+LGSVTLEKSKLD+S
Sbjct: 61  --SSSSSAVSDGDSIALLERCFVAPSAPAATSSSSLGPVMKGQYGSLGSVTLEKSKLDLS 120

Query: 121 QKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQNL 180
           QKQSKSSPE                                                   
Sbjct: 121 QKQSKSSPE--------------------------------------------------- 180

Query: 181 VEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDGD 240
                                            TAIGGGGGDIGKKINHGGGDGGDDDGD
Sbjct: 181 ---------------------------------TAIGGGGGDIGKKINHGGGDGGDDDGD 240

Query: 241 DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEMG 300
           DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEMG
Sbjct: 241 DDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEMG 300

Query: 301 LVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS 360
           LVSSAQMVKFL+INARPT TRFISR+LPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS
Sbjct: 301 LVSSAQMVKFLAINARPTTTRFISRSLPQGISRAFIGRMLADPAFLYRLLLEQAATIGCS 360

Query: 361 AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN 420
           AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN
Sbjct: 361 AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLPN 420

Query: 421 NIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVPT 480
           NIFEKSYP+REFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLS KK+ERLSVSVPT
Sbjct: 421 NIFEKSYPLREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSRKKEERLSVSVPT 480

Query: 481 VSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSRL 540
           VSTNALG GAFLGLYANLRYQLLCGFDRAMI+HFDVIGVALFFSSALRVLNVQLGERSRL
Sbjct: 481 VSTNALGYGAFLGLYANLRYQLLCGFDRAMISHFDVIGVALFFSSALRVLNVQLGERSRL 533

Query: 541 AWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADSV 600
           AWLGVEADPLVQSSDLLK+VYNRPSE V+   SSKWFISKNAIISGLGLLG+KQTGADSV
Sbjct: 541 AWLGVEADPLVQSSDLLKQVYNRPSEGVN-EPSSKWFISKNAIISGLGLLGVKQTGADSV 533

Query: 601 SEGESVPKARRKRVVRKKVTAGSS 617
           SEGES+PKARRKR+VRKKVTAGSS
Sbjct: 601 SEGESIPKARRKRIVRKKVTAGSS 533

[Close]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL
Match: A0A6J1JKL8 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486651 PE=3 SV=1)

HSP 1 Score: 887.1 bits (2291), Expect = 4.2e-254
Identity = 488/626 (77.96%), Postives = 507/626 (80.99%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPI+TQLPT KLWLP  VKLG C R R VLVVKA TT SP   PS SSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLVVKAVTTFSP--PPSHSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA----------SSSLGPVMKGQYGALGSVTLEKSKLD 120
           SS  S G+SIALLERCFA  S+PA          SSS GPVMKG+YGALG+VTLEKSKLD
Sbjct: 61  SSDDSDGNSIALLERCFAAPSSPAGSDSSLTATSSSSSGPVMKGKYGALGAVTLEKSKLD 120

Query: 121 MSQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQ 180
           MSQKQ++SSPE                                                 
Sbjct: 121 MSQKQTRSSPE------------------------------------------------- 180

Query: 181 NLVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDD 240
                                              TAIGGGGGDIGKKINHGGGDGGDDD
Sbjct: 181 -----------------------------------TAIGGGGGDIGKKINHGGGDGGDDD 240

Query: 241 GDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYE 300
           GDDDDYYDEFDDGDEGDEGGLFRRR+FLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYE
Sbjct: 241 GDDDDYYDEFDDGDEGDEGGLFRRRQFLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYE 300

Query: 301 MGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIG 360
           MGLVSSAQMVKFL+INARPT TRFISRTLPQGISR+FIGRMLADPAFLYRLLLEQAATIG
Sbjct: 301 MGLVSSAQMVKFLAINARPTTTRFISRTLPQGISRSFIGRMLADPAFLYRLLLEQAATIG 360

Query: 361 CSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420
           C+AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL
Sbjct: 361 CTAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420

Query: 421 PNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSV 480
           PNN+FEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFL+ KKK+RLSVSV
Sbjct: 421 PNNLFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLAKKKKDRLSVSV 480

Query: 481 PTVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 540
           PTVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS
Sbjct: 481 PTVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 539

Query: 541 RLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGAD 600
           RLAWLGVEADPLVQSSDLL+KVYNR SEDV+R SSSKWFISKNAI SGLGLLGLKQTGAD
Sbjct: 541 RLAWLGVEADPLVQSSDLLQKVYNRRSEDVNR-SSSKWFISKNAITSGLGLLGLKQTGAD 539

Query: 601 SVSEGESVPKARRKRVVRKKVTAGSS 617
           SVSEGES+PKARRKR+VRKKVTAGSS
Sbjct: 601 SVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL
Match: A0A0A0KDZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=3 SV=1)

HSP 1 Score: 885.2 bits (2286), Expect = 1.6e-253
Identity = 481/625 (76.96%), Postives = 506/625 (80.96%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPINTQL TN LWLP++VKLGP +RNRAVLVVKAFT S P      SSS
Sbjct: 1   MSHAVFQTAQIMPINTQLTTNNLWLPAVVKLGPSYRNRAVLVVKAFTASPP------SSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA---------SSSLGPVMKGQYGALGSVTLEKSKLDM 120
           SSGVSYGDSI+ LERCF  S  PA         SSS GPVMKG+YGA G+VTLEKSKLD+
Sbjct: 61  SSGVSYGDSISFLERCFETSFPPAGVDPSLAVSSSSFGPVMKGKYGAFGAVTLEKSKLDL 120

Query: 121 SQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQN 180
           SQKQSKSSPEL                                                 
Sbjct: 121 SQKQSKSSPEL------------------------------------------------- 180

Query: 181 LVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDDG 240
                                              AIGGGGGDIGKKINHGGGDGGDDDG
Sbjct: 181 -----------------------------------AIGGGGGDIGKKINHGGGDGGDDDG 240

Query: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYEM 300
           DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYEM
Sbjct: 241 DDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTMMDLPAGFRQAYEM 300

Query: 301 GLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIGC 360
           GLVSSAQMV+FL++NARPT TRFISR+LPQGISRAFIGRMLADP+FLY+LLLEQAATIGC
Sbjct: 301 GLVSSAQMVRFLAVNARPTTTRFISRSLPQGISRAFIGRMLADPSFLYKLLLEQAATIGC 360

Query: 361 SAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420
           +AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP
Sbjct: 361 AAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKLP 420

Query: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSVP 480
           NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQG LSNFLSSKK+ERLSVSVP
Sbjct: 421 NNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGVLSNFLSSKKQERLSVSVP 480

Query: 481 TVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERSR 540
           TVSTNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALF SSA+RVLNVQLGERSR
Sbjct: 481 TVSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFLSSAMRVLNVQLGERSR 534

Query: 541 LAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGADS 600
           LAWLG+EADPLVQS +LL+KVYNRPS+ VS+ SSSKWFISKNAIISGLGLLGLKQ+G DS
Sbjct: 541 LAWLGIEADPLVQSRELLEKVYNRPSQGVSQ-SSSKWFISKNAIISGLGLLGLKQSGVDS 534

Query: 601 VSEGESVPKARRKRVVRKKVTAGSS 617
           VSEGESVPKARRKR+VR+KVTAGSS
Sbjct: 601 VSEGESVPKARRKRIVRRKVTAGSS 534

[Close]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL
Match: A0A6J1EHU7 (protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434492 PE=3 SV=1)

HSP 1 Score: 883.6 bits (2282), Expect = 4.6e-253
Identity = 486/626 (77.64%), Postives = 506/626 (80.83%), Query Frame = 0


Query: 1   MSHAVFQTAQIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPSSSSS 60
           MSHAVFQTAQIMPI+TQLPT KLWLP  VKLG C R R VLVVKA TT SP   PS SSS
Sbjct: 1   MSHAVFQTAQIMPIHTQLPTTKLWLPPPVKLGSCQRTRTVLVVKAVTTFSP--PPSHSSS 60

Query: 61  SSGVSYGDSIALLERCFANSSAPA----------SSSLGPVMKGQYGALGSVTLEKSKLD 120
           SS  S G+SIALLERCFA  S+PA          SSS GPVMKG+YGALG+VTLEKSKLD
Sbjct: 61  SSDDSDGNSIALLERCFAAPSSPAGSDSSLTATSSSSSGPVMKGKYGALGAVTLEKSKLD 120

Query: 121 MSQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIGDTRPQ 180
           MSQKQ++SSPE                                                 
Sbjct: 121 MSQKQTRSSPE------------------------------------------------- 180

Query: 181 NLVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGDGGDDD 240
                                              TAIGGGGGDIGKKINHGGGDGGDDD
Sbjct: 181 -----------------------------------TAIGGGGGDIGKKINHGGGDGGDDD 240

Query: 241 GDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGFRQAYE 300
           GDDDDYYDEFDDGDEGDEGGLFRRR+ LEELFDRKFVDAVLNEWQKT+MDLPAGFRQAYE
Sbjct: 241 GDDDDYYDEFDDGDEGDEGGLFRRRQLLEELFDRKFVDAVLNEWQKTIMDLPAGFRQAYE 300

Query: 301 MGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQAATIG 360
           MGLVSSAQMVKFL+INARPT TRFISRTLPQGISR+FIGRMLADPAFLYRLLLEQAATIG
Sbjct: 301 MGLVSSAQMVKFLAINARPTTTRFISRTLPQGISRSFIGRMLADPAFLYRLLLEQAATIG 360

Query: 361 CSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420
           C+AWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL
Sbjct: 361 CTAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQNTLQKL 420

Query: 421 PNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKERLSVSV 480
           PNN+FEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFL+ KKK+RLSVSV
Sbjct: 421 PNNLFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLAKKKKDRLSVSV 480

Query: 481 PTVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 540
           PT+STNALG GAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS
Sbjct: 481 PTLSTNALGYGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQLGERS 539

Query: 541 RLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLKQTGAD 600
           RLAWLGVEADPLVQSSDLL+KVYNR SEDV+R SSSKWFISKNAI SGLGLLGLKQTGAD
Sbjct: 541 RLAWLGVEADPLVQSSDLLQKVYNRRSEDVNR-SSSKWFISKNAITSGLGLLGLKQTGAD 539

Query: 601 SVSEGESVPKARRKRVVRKKVTAGSS 617
           SVSEGES+PKARRKR+VRKKVTAGSS
Sbjct: 601 SVSEGESIPKARRKRIVRKKVTAGSS 539

[Close]

BLAST of ClCG09G014350 vs. TAIR 10
Match: AT5G24690.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 649.8 bits (1675), Expect = 2.2e-186
Identity = 366/631 (58.00%), Postives = 429/631 (67.99%), Query Frame = 0


Query: 1   MSHAVFQTA----QIMPINTQLPTNKLWLPSIVKLGPCHRNRAVLVVKAFTTSSPSSSPS 60
           MSH VFQ+      + P+   LP     +P  +   PC   R  +               
Sbjct: 1   MSHMVFQSVVAPKPLSPLKPCLP-----IPRPLVTLPCKLRRGFV--------------- 60

Query: 61  SSSSSSGVSYGDSIALLERCF-----------ANSSAPASSSLGPVMKGQYGALGSVTLE 120
             +SSS     DS++ LERC            ++ S  AS+ + PVMKG++G++G+VTLE
Sbjct: 61  -RASSSSFLVDDSVSGLERCLQLPSGVELGTSSSGSFSASTQMCPVMKGKFGSVGAVTLE 120

Query: 121 KSKLDMSQKQSKSSPELPPLQLPPPQPLHGFHTLPLALPFYSQPFTLMGYNNSQCSITIG 180
           K KLDM+QK S++SPE+                                           
Sbjct: 121 KGKLDMTQKISETSPEI------------------------------------------- 180

Query: 181 DTRPQNLVEAAQLNGDFSTKSLLKDSSQNTIIEHSNAYVDTAIGGGGGDIGKKINHGGGD 240
                                                    A GGGGG+IGK IN+GGGD
Sbjct: 181 -----------------------------------------ATGGGGGNIGKSINNGGGD 240

Query: 241 GGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVDAVLNEWQKTVMDLPAGF 300
           GGDD+GDDDDY+DEFDDGDEGD+ GLFRRR FL E+FDRKFVDAVLNEWQKT+MDLPAG 
Sbjct: 241 GGDDNGDDDDYFDEFDDGDEGDDDGLFRRRMFLAEIFDRKFVDAVLNEWQKTMMDLPAGL 300

Query: 301 RQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFIGRMLADPAFLYRLLLEQ 360
           RQAYEMGLVSSAQMVKFL+INARPT TR ISR LPQG+SRAF+GRMLADPAFLY+LLLEQ
Sbjct: 301 RQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVGRMLADPAFLYKLLLEQ 360

Query: 361 AATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWSLAPCRSYGNTFRFDLQN 420
           AAT+GCS WWE+KNRK+R+K+EWDLALINVLTV+ACNA  VW LAPCRSYGNTFRFDLQN
Sbjct: 361 AATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLLAPCRSYGNTFRFDLQN 420

Query: 421 TLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCMVGITAGAAQGALSNFLSSKKKER 480
           TLQKLPNN+FE SYP+REFDLQKR HS FYKAAEL ++G+ AG  QG+LSN L+ KKK R
Sbjct: 421 TLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAGTLQGSLSNVLAGKKKNR 480

Query: 481 LSVSVPTVSTNALGNGAFLGLYANLRYQLLCGFDRAMINHFDVIGVALFFSSALRVLNVQ 540
           +SV+VP++STNALG GAFLG+YANLRYQLLCGF+R + +HFDVIGVALFF +ALR++NVQ
Sbjct: 481 VSVTVPSISTNALGYGAFLGIYANLRYQLLCGFERGVSSHFDVIGVALFFGTALRIMNVQ 521

Query: 541 LGERSRLAWLGVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKNAIISGLGLLGLK 600
           LGE+SR  WLGVEADPL QS DLL K YNRPSE+     SSKWFISKNAI+S  GLLG K
Sbjct: 541 LGEKSRQVWLGVEADPLAQSDDLLAKAYNRPSEEAVAKPSSKWFISKNAIVS--GLLGKK 521

Query: 601 QTGADSVSEGESVPKARRKRVVRKKVTAGSS 617
           Q   DSVS+    PKARRKR+VRKKV A +S
Sbjct: 601 Q--EDSVSDSPP-PKARRKRIVRKKVAASAS 521

[Close]

BLAST of ClCG09G014350 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 90.9 bits (224), Expect = 3.9e-18
Identity = 92/339 (27.14%), Postives = 153/339 (45.13%), Query Frame = 0


Query: 209 GGGGGDIGKKINHGGGDGGDDDGDDDDYYDEFDDGDEGDEGGLFRRRKFLEELFDRKFVD 268
           GGG G  G     GGG GGD +GDD +  DE D  +E + G + +              +
Sbjct: 112 GGGNGGNG----DGGGGGGDGEGDDGE--DEADKAEEKEFGPILK-------------FE 171

Query: 269 AVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQGISRAFI 328
            V+ E ++  + LP    +A +   +    ++++L +        F+ R+          
Sbjct: 172 EVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAM-----LR 231

Query: 329 GRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTACNAIVVWS 388
            RMLADP+FL+++  E A    C+ + E++ R +    E++L   ++L     +  +V  
Sbjct: 232 NRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGL 291

Query: 389 LAPCRSYG-----NTFRF-DLQNTLQKLPNNIFEKSYPMREFDLQKRIHSFFYKAAELCM 448
           LAP    G     +T  F DL+     LP+++FE   P  +F + +RI +FFYK      
Sbjct: 292 LAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYGS 351

Query: 449 VGITAGAAQGALSNFL----SSKKKERLSVSVPTVSTNALGNGAFLGLYANLRYQLLCGF 508
           VG   G     ++N +     S KK    V +P +  +A   G FLGL +N RYQ++ G 
Sbjct: 352 VGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGL 411

Query: 509 DRAMINHF---DVIGVALFFSSALRVLNVQLGERSRLAW 535
           +R +        +  VA+ F+  +R  N   G    + W
Sbjct: 412 ERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDW 426

[Close]

BLAST of ClCG09G014350 vs. TAIR 10
Match: AT3G56140.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 90.5 bits (223), Expect = 5.1e-18
Identity = 72/251 (28.69%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 262 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQ 321
           FDR  +  V+N   +    LP   +   ++GLVS   +     +   P  +    R    
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR---- 477

Query: 322 GISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 381
              + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 478 --FQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 537

Query: 382 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 441
           +   VW  AP  S+        G      L+  L  +P+N F+KS   RE++L  RI S 
Sbjct: 538 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 597

Query: 442 FYKAAELCMVGITAGAAQGALSNFLSSKKK----ERLSVSVPTVS---TNALGNGAFLGL 498
                +L  VG+ +  A    SN L+  +K    E +    P  S     A+  G FLG 
Sbjct: 598 IVGGLKLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGT 657

[Close]

BLAST of ClCG09G014350 vs. TAIR 10
Match: AT2G40400.1 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-17
Identity = 86/338 (25.44%), Postives = 147/338 (43.49%), Query Frame = 0


Query: 262 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQ 321
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 322 GISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 381
              + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 382 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 441
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 442 FYKAAELCMVGITAGAAQGALSNFLSSKK---KERLSVS-----VPTVSTNALGNGAFLG 501
                +L  VG+ +  A    SN L + +   K  L V       P + T AL  G +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 502 LYANLRYQLLCGFDRAMINHFDVIG----VALFFSSALRVLNVQLGERSRLAWL------ 561
             +N+RYQ++ G     I+  D +     +    S  +RV N   G +    W+      
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 562 GVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKN 574
           G++    V +S+ + +V ++ + + S +  +     KN
Sbjct: 709 GLQTQKSVTTSNQIPEVASQSTVEYSTTEEASMDDLKN 734

[Close]

BLAST of ClCG09G014350 vs. TAIR 10
Match: AT2G40400.2 (Protein of unknown function (DUF399 and DUF3411) )

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-17
Identity = 86/338 (25.44%), Postives = 147/338 (43.49%), Query Frame = 0


Query: 262 FDRKFVDAVLNEWQKTVMDLPAGFRQAYEMGLVSSAQMVKFLSINARPTATRFISRTLPQ 321
           FDR  +  V+N   +    LP   ++  ++GLVS   +  F  +   P  +    R    
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 468

Query: 322 GISRAFIGRMLADPAFLYRLLLEQAATIGCSAWWEIKNRKDRIKQEWDLALINVLTVTAC 381
              + F  R+LADP FL RL +E+A +I  +   + + RK+   +E D  + + +  +  
Sbjct: 469 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 528

Query: 382 NAIVVWSLAPCRSY--------GNTFRFDLQNTLQKLPNNIFEKSYPMREFDLQKRIHSF 441
           +   VW  AP  S+        G      L+  L  +P+N F+KS   +E+ L  RI S 
Sbjct: 529 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 588

Query: 442 FYKAAELCMVGITAGAAQGALSNFLSSKK---KERLSVS-----VPTVSTNALGNGAFLG 501
                +L  VG+ +  A    SN L + +   K  L V       P + T AL  G +LG
Sbjct: 589 IIGGLKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKT-ALVYGGYLG 648

Query: 502 LYANLRYQLLCGFDRAMINHFDVIG----VALFFSSALRVLNVQLGERSRLAWL------ 561
             +N+RYQ++ G     I+  D +     +    S  +RV N   G +    W+      
Sbjct: 649 TSSNIRYQIIAGLIEHRIS--DELSSQPLLVNMISFVVRVANSYFGTQQ---WIDLARST 708

Query: 562 GVEADPLVQSSDLLKKVYNRPSEDVSRSSSSKWFISKN 574
           G++    V +S+ + +V ++ + + S +  +     KN
Sbjct: 709 GLQTQKSVTTSNQIPEVASQSTVEYSTTEEASMDDLKN 734

The following BLAST results are available for this feature:

BLAST of ClCG09G014350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888281.1	5.4e-264	80.80	protein RETICULATA-RELATED 1, chloroplastic [Benincasa hispida]	[more]
XP_008449416.1	2.4e-259	78.88	PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Cucumis melo]	[more]
XP_022155012.1	5.1e-254	78.85	protein RETICULATA-RELATED 1, chloroplastic [Momordica charantia]	[more]
XP_022989621.1	8.7e-254	77.96	protein RETICULATA-RELATED 1, chloroplastic [Cucurbita maxima]	[more]
XP_004140107.1	3.3e-253	76.96	protein RETICULATA-RELATED 1, chloroplastic [Cucumis sativus] >KGN47925.1 hypoth...	[more]

BLAST of ClCG09G014350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGP9	5.5e-17	27.14	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q8RWG3	7.1e-17	28.69	Protein RETICULATA-RELATED 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9SIY5	6.0e-16	25.44	Protein RETICULATA-RELATED 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	8.7e-15	24.63	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]

BLAST of ClCG09G014350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BMX1	1.1e-259	78.88	protein RETICULATA-RELATED 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A6J1DN85	2.5e-254	78.85	protein RETICULATA-RELATED 1, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1JKL8	4.2e-254	77.96	protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0KDZ4	1.6e-253	76.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411290 PE=3 SV=1	[more]
A0A6J1EHU7	4.6e-253	77.64	protein RETICULATA-RELATED 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of ClCG09G014350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24690.1	2.2e-186	58.00	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	3.9e-18	27.14	reticulata-related 1	[more]
AT3G56140.1	5.1e-18	28.69	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.1	4.3e-17	25.44	Protein of unknown function (DUF399 and DUF3411)	[more]
AT2G40400.2	4.3e-17	25.44	Protein of unknown function (DUF399 and DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 329..498 e-value: 1.1E-60 score: 204.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 588..616
None	No IPR available	PANTHER	PTHR31038	EXPRESSED PROTEIN-RELATED	coord: 199..612 coord: 31..122
None	No IPR available	PANTHER	PTHR31038:SF2	PROTEIN RETICULATA-RELATED 1, CHLOROPLASTIC-LIKE	coord: 199..612 coord: 31..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G014350.1	ClCG09G014350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044249	cellular biosynthetic process
biological_process	GO:0006631	fatty acid metabolic process
biological_process	GO:0008610	lipid biosynthetic process
biological_process	GO:0099402	plant organ development
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups