ClCG09G013980 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G013980
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr09: 22421291 .. 22421903 (+)
RNA-Seq Expression	ClCG09G013980
Synteny	ClCG09G013980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGTCGACAAGAAGACCACTGACGAGTCTTCTTTTAAAACCACCACAGCGGGTTTTGTGGGACCCAAGAAACGAATAAATGGCTGGTGGGATGAGGTTAAAAGGTTGGGAGTAGAGAGAAGGCGGGCTTTTAAAGACAAAAACGAGGAAGAGGCCCAGTGTCCAGCCCAAAAATCCGACCAAAGAGGTATTCAGTAGGGAGTTATGGGCTGAGGTTATGAAAGAGGTCGTTCAGACGGCCAAGTACTTTACCAATGAGTAACAAAAAGAAAGGTGATATGAGGAAGCTAAGCGTGCTTTGAGGAAAACATTAACCGAAGATAAGCAAGCTAGGATGAGAGCCAAGGACTTGGCAACCAAAGAAATAGATAAAGAAGAGGAAGGGAGACTAAGGGTTGAGGAAAAAGAAGCCGATAGAGAAAGAGAACAAAAAATAAAACATGGTGCAGGAGGTATCAGAATGGCTAGCAATGCGGCCGCTTCAAGCCAGCCGCATCAGCAGACAAAGGTTGGAGAAGAAGAGGGCGATGCGACTGCATCACCTGTTCAGCATCGTGAAGGAGAAGCCCCCATTATTAAAGACGAGGAAGAGCTTGCTCCTCTTTTTTAG

mRNA sequence

ATGATTGTCGACAAGAAGACCACTGACGAGTCTTCTTTTAAAACCACCACAGCGGGTTTTGTGGGACCCAAGAAACGAATAAATGGCTGGTGGGATGAGGTTAAAAGGTTGGGAGTAGAGAGAAGGCGGGCTTTTAAAGACAAAAACGAGGAAGAGGCCCAGTGTCCAGCCCAAAAATCCGACCAAAGAGCTAAGCGTGCTTTGAGGAAAACATTAACCGAAGATAAGCAAGCTAGGATGAGAGCCAAGGACTTGGCAACCAAAGAAATAGATAAAGAAGAGGAAGGGAGACTAAGGGTTGAGGAAAAAGAAGCCGATAGAGAAAGAGAACAAAAAATAAAACATGGTGCAGGAGGTATCAGAATGGCTAGCAATGCGGCCGCTTCAAGCCAGCCGCATCAGCAGACAAAGGTTGGAGAAGAAGAGGGCGATGCGACTGCATCACCTGTTCAGCATCGTGAAGGAGAAGCCCCCATTATTAAAGACGAGGAAGAGCTTGCTCCTCTTTTTTAG

Coding sequence (CDS)

ATGATTGTCGACAAGAAGACCACTGACGAGTCTTCTTTTAAAACCACCACAGCGGGTTTTGTGGGACCCAAGAAACGAATAAATGGCTGGTGGGATGAGGTTAAAAGGTTGGGAGTAGAGAGAAGGCGGGCTTTTAAAGACAAAAACGAGGAAGAGGCCCAGTGTCCAGCCCAAAAATCCGACCAAAGAGCTAAGCGTGCTTTGAGGAAAACATTAACCGAAGATAAGCAAGCTAGGATGAGAGCCAAGGACTTGGCAACCAAAGAAATAGATAAAGAAGAGGAAGGGAGACTAAGGGTTGAGGAAAAAGAAGCCGATAGAGAAAGAGAACAAAAAATAAAACATGGTGCAGGAGGTATCAGAATGGCTAGCAATGCGGCCGCTTCAAGCCAGCCGCATCAGCAGACAAAGGTTGGAGAAGAAGAGGGCGATGCGACTGCATCACCTGTTCAGCATCGTGAAGGAGAAGCCCCCATTATTAAAGACGAGGAAGAGCTTGCTCCTCTTTTTTAG

Protein sequence

MIVDKKTTDESSFKTTTAGFVGPKKRINGWWDEVKRLGVERRRAFKDKNEEEAQCPAQKSDQRAKRALRKTLTEDKQARMRAKDLATKEIDKEEEGRLRVEEKEADREREQKIKHGAGGIRMASNAAASSQPHQQTKVGEEEGDATASPVQHREGEAPIIKDEEELAPLF

Homology

The following BLAST results are available for this feature:

BLAST of ClCG09G013980 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG09G013980 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG09G013980 vs.


Match Name	E-value	Identity	Description

BLAST of ClCG09G013980 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G013980.1	ClCG09G013980.1	mRNA