ClCG09G012070 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACTCCAACGATCCCAGAAATTCAGAAACGGGACAATCAATCAAATTCTGCTTTCCTTCTTTCTCAAGATCTCCATCTCTCTCTGTGATTCGATCAATTCGATCGTTGCAGTGCGGAGATGCGGTTCTTCAGGAAAATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGACAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTCCAGGTTGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGTCCATTCTATTATCAATTTTCCTCTTTCTCTTTTAATCTTCGCTTGACTGCTGGATTTTGCTTTCCTGCGTTTCATAAATGAATTTGGCAATTTCTTCTCTATCTATTGCGAGCCGAATGGTCGAAGTGAGTGAGATTTCTTTCCATACTTCAAACCCGTCAGTTTCGTTGGAATTCTAGTGTCGTCATTTTGTTGGGGATTCAAATTATGTTTTCTTCTGAAAATGGGTTCATGCTTTTGTTTATGTGAGCTCAGGATATCTGTAGACCATATATTTGTTCGAAATTGGTTTCTTTTGGCATTTATGAATTGTTGCTGACACAAATTCAATACAGTAAATGCTTATCAACCGTATTTAAACTTGATCACTTTTCTTATTCTTTCAACGATTCAACTTATCCCTATCCAAAATAAATTAGAAGACGAGGAAATAATGGTCGTCTAGTAATATCTTTCCGCAAGGAGGATGCCAAACAATTACAGTTATTTAAGTTTCTGATTTCAGCTGTTAAGAGCTTCTTTTTGATATATTATTGTCTCGATATATTAATGAAGGTTATGGATATCAATTCTATTTGAGTAATTAGATATGATAAATCAATGCATTGTTTCTATGAATACAATGCTGGTAAGTTGCAAAAGCACTTGGGAAAGAAAATTGATCAGGAAAGTGATGGACTTAAGCAAATCATTTCAGTTTCCATTTTATTGATTCTTATCTCGAATGTTAGTGTCAGTTGAGTTCGTAGGACTTTATTAAAAATACACACTAAATCTTACTCCGACTGTCTACAAGGGCCTTCATGACTAAGAAACTCAGTAATTCTATGCTTCCATGAATTAATTGTTACTATTTCCAATCCCTAATTCACAAGTAATTCGAGTTACATGTACTTTCCCTCTTGAGATCTCTCCCAAGTGCAAAGTCACTCACCACGAAGTAATCCCTCTCCTCCTTCTTCACGACCTTTCTTTATAGCCAAACACGATAACCACCTCCCTAACTAATTGCTACTATACCCTCACTATTACTATTCCCACGATATCTCCTATCAATATCCTCACACAAACTTAAGGTGTAGGCTATTTCTTCTCCATCAACTAGAGTGATCTGTTAATTGAAATCGTAACCTGATCCATCTGTATCATCGTATATATATGCAAGGTCCTACTTTCCTGTTTTTCAGAAATTTGATCCATCTATGTCATTATATATATATCTCTGTATCTATACATGTGGTCCTATTCCTCCTGTTTTGAGATGGGTGAGTTTCTCCTTTGAGAATTTTGCCAATAAAGTAAGTAATGAGAGATCTCATTTTAATGAGACCTCAACTCCTTTTCGTTTTGCTAGTATGAATTGCAAGTCACTACATGGTCTCTAATATTTGCAAGTTTTCCTTCCATTGTACAAATTAAATGGCACTAGGACTTGTTACTGGTGAAAGTCTTGTGATGGTTTTTGTCATTTGCAAGATTACAACGATGGCATGTTTGTTAATTTTTGGAACATTTCCTATATTCAGGGTTTGACATGGTATGCAAAGTGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAAGAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATTCGAAGCCATTTCCCCGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAGGTTATATTGCAGGAAGGTAAACTTCAACAATGTATTAAACATCAAGGTAGATTGTTATTGGTATGAAGAAGACAAAAAACCCTGAGAAATGATCCCTTCAGCCAATGGTGTTCAGGTTCAATTTTTTTAGTTTATTTGCACATGGTGGTCGATTTATGAGGATGATCTGTCTCATTTTGGTGACAAAGAAAAGGAAAAACTTGGCTTTAAAGTACAGAAGTTTGAATCGACTGTAATAAGGGATCTAGTTTGTACTGCTGATCATTTGAACATATGTTGTGAACGCCCTACAGGTGGAGATAAAGAGGAATACAGAAATGGGCACTAACACACTAACTATTTGAATCTGCAACTTCAAGGTGTTGTTTAATCTCTCTCTCTCTCTCTCTAGTTCTTCACTTGCCATAAGATTGCATTTATGGAGAGTCATTTACCTTTTATGTCTTAGTTTTTAGTCAGTTAAGGTGGTGAAGTGTGAATCTATGGATGTGAAAATAAACTTAAGATGCACCAGAATGTTTATGTTGTGTGTTCTTCAAAGGATTCAAAGTTAATTATTTGATTCCACTTTTATTTTTATCTTATTATTTATTTATTTA AAAAAACTCCAACGATCCCAGAAATTCAGAAACGGGACAATCAATCAAATTCTGCTTTCCTTCTTTCTCAAGATCTCCATCTCTCTCTGTGATTCGATCAATTCGATCGTTGCAGTGCGGAGATGCGGTTCTTCAGGAAAATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGACAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTCCAGGTTGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCAAAGTGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAAGAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATTCGAAGCCATTTCCCCGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAGGTTATATTGCAGGAAGGTAAACTTCAACAATGTATTAAACATCAAGGTAGATTGTTATTGGTATGAAGAAGACAAAAAACCCTGAGAAATGATCCCTTCAGCCAATGGTGTTCAGGTTCAATTTTTTTAGTTTATTTGCACATGGTGGTCGATTTATGAGGATGATCTGTCTCATTTTGGTGACAAAGAAAAGGAAAAACTTGGCTTTAAAGTACAGAAGTTTGAATCGACTGTAATAAGGGATCTAGTTTGTACTGCTGATCATTTGAACATATGTTGTGAACGCCCTACAGGTGGAGATAAAGAGGAATACAGAAATGGGCACTAACACACTAACTATTTGAATCTGCAACTTCAAGGTGTTGTTTAATCTCTCTCTCTCTCTCTCTAGTTCTTCACTTGCCATAAGATTGCATTTATGGAGAGTCATTTACCTTTTATGTCTTAGTTTTTAGTCAGTTAAGGTGGTGAAGTGTGAATCTATGGATGTGAAAATAAACTTAAGATGCACCAGAATGTTTATGTTGTGTGTTCTTCAAAGGATTCAAAGTTAATTATTTGATTCCACTTTTATTTTTATCTTATTATTTATTTATTTA ATGCGGTTCTTCAGGAAAATTGCAGGAATTCTAGGGTTTTCCAAGGACGATTCTCACGACGTCAAGAACGAAGATGACGACGTTGATTCCGACAATCATGCTCCCGATCGCGTCCATATGCAGGGCACTGGTCTTCCTCGGAGAGGCTTCAGCGTCCCAGTCCAGGTTGCCGTCAATCGCTCCAACCCCGGCCCTATTCTTCTTCCCTCTAGTTCCGGCGATGGTGGAGTTCAGGGTTTGACATGGTATGCAAAGTGTCTTCGAGTTGATGAAGATGGAGATGTAGCTGAAGAGTTCCTGGAGGAGGTCATACCTGAGGTTCAAACCAGTACTACAGACCATTCGAAGCCATTTCCCCGATTTCAGATAAATAATAGAAATAGACCAGCTAAAGTAGAGAACCAGGTTATATTGCAGGAAGGTAAACTTCAACAATGTATTAAACATCAAGGTAGATTGTTATTGGTATGA MRFFRKIAGILGFSKDDSHDVKNEDDDVDSDNHAPDRVHMQGTGLPRRGFSVPVQVAVNRSNPGPILLPSSSGDGGVQGLTWYAKCLRVDEDGDVAEEFLEEVIPEVQTSTTDHSKPFPRFQINNRNRPAKVENQVILQEGKLQQCIKHQGRLLLV Homology
BLAST of ClCG09G012070 vs. NCBI nr
Match: XP_008465957.1 (PREDICTED: uncharacterized protein LOC103503527 [Cucumis melo]) HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78 Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of ClCG09G012070 vs. NCBI nr
Match: XP_038886945.1 (uncharacterized protein LOC120077122 [Benincasa hispida]) HSP 1 Score: 297.7 bits (761), Expect = 5.7e-77 Identity = 146/156 (93.59%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of ClCG09G012070 vs. NCBI nr
Match: XP_004148488.1 (uncharacterized protein LOC101221247 [Cucumis sativus] >KGN60403.1 hypothetical protein Csa_000704 [Cucumis sativus]) HSP 1 Score: 295.8 bits (756), Expect = 2.2e-76 Identity = 145/156 (92.95%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of ClCG09G012070 vs. NCBI nr
Match: KAA0038590.1 (uncharacterized protein E6C27_scaffold92G001200 [Cucumis melo var. makuwa]) HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76 Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of ClCG09G012070 vs. NCBI nr
Match: TYK31151.1 (uncharacterized protein E5676_scaffold455G004310 [Cucumis melo var. makuwa]) HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75 Identity = 142/150 (94.67%), Postives = 146/150 (97.33%), Query Frame = 0
BLAST of ClCG09G012070 vs. ExPASy TrEMBL
Match: A0A1S3CRI6 (uncharacterized protein LOC103503527 OS=Cucumis melo OX=3656 GN=LOC103503527 PE=4 SV=1) HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78 Identity = 148/156 (94.87%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of ClCG09G012070 vs. ExPASy TrEMBL
Match: A0A0A0LF42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G902940 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.0e-76 Identity = 145/156 (92.95%), Postives = 150/156 (96.15%), Query Frame = 0
BLAST of ClCG09G012070 vs. ExPASy TrEMBL
Match: A0A5A7T5L6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001200 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 4.0e-76 Identity = 143/151 (94.70%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of ClCG09G012070 vs. ExPASy TrEMBL
Match: A0A5D3E6C0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004310 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75 Identity = 142/150 (94.67%), Postives = 146/150 (97.33%), Query Frame = 0
BLAST of ClCG09G012070 vs. ExPASy TrEMBL
Match: A0A6J1DQR1 (uncharacterized protein LOC111022940 OS=Momordica charantia OX=3673 GN=LOC111022940 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.8e-68 Identity = 129/153 (84.31%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of ClCG09G012070 vs. TAIR 10
Match: AT4G17960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 162.2 bits (409), Expect = 3.5e-40 Identity = 84/158 (53.16%), Postives = 110/158 (69.62%), Query Frame = 0
BLAST of ClCG09G012070 vs. TAIR 10
Match: AT5G46620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23 Identity = 68/159 (42.77%), Postives = 89/159 (55.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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