ClCG09G012000 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCCGGGGCAGGGCGAGGGGGTTCCCAATGCCTGCCCCGTGGGGGGAATTTACCCCATCCTTGCCCCCGTCCCTGCCATTTGTAGGCAGGGATGGGGGCGAGGATTCCCTGTCGGGGAAACAGGTCCCCGTAGGACCCATTCTTCATTATTCTCTGCGAGAGCAAGCAAGGGAGAGCGAGCGAGTGAGAGAGATAAAGTGGTAAGTGAGGAAAAGATGCGAGGGCGCGAGAGTCAACAATAACATCTTATATATATATATATTTAATCGGTTTGGTGTCAGGGATCGGGGTTGGGGTCGGGGTGGGGATACCCTCCCCGTTCCTAGACAGGGATCCTACAAAGATCCTCGGTTTGACCCCTATCCTTGGTCAACCTGGGGATTCCCTAATCTGATCGGGTATTTTGGAGACTGTAGGAGACGATATTCAGTTCATATGAGGCGCGAGTGTTGTAGATGGTTTGTGAGGTGCTCTTGGTGGATGGTCGAGAGCTGAGAGTCGAGTGTACTGATGTGTGTATCGAGATCTAGGGTTACAGACAGACCGAGAGTTGAGAGTACTGAGAGACGAGAGTTGAGAGTGGACTAGATAAATAGTCAAGTAAGTCTAGAGCCGAGTAAGCCGAGAGAGTCGAGAGGCGAGACAGTTGAGAGAACTGAGAGTCAAGATAGTCAAGAGCTAAGAGACGAGAGCAAGAGTTTTACAGAATGCTTTTTTGGATATCTGTTTCTTTTCCTTTATCTGATTATGTTTTATTACTCGCACTTGTAGATGACCAACTTCAAGATTGCTGCTTAAGATCGTTTTCCTGCCCAAGCTACTAGCTTTTCATCACACATTGGAGTTGTGAATCGGCTCATTAAAGAGAAGCTAACAGATGGGCAGCTAGATATGTTTAGGAGGACGGTGTTTGGGAGGTTTGTGGACATGGACATAGTGTTCAACAGTCCATTAGTCCACCATTTTCTGGTGAGGGAGGTACACGTCCAGAACCATAATGATGAGACCATGTACTTCGACCTCAATGGTCATACTGTAAAATTCTTCAAGGACGAATTTCTACTAGTCACTGGACTCTGGAGATCACCAGTGGTAGTTCCTTGCACCGTTGCAACTATCGGTGCACTTAGGACGAAATATTTCCACCGTCTGTGTGAGGCGAAGATACACCTGATCGCCTTTGAGGAGAATTACAAGGGGCTACAATTTGAGACTGACCTAGATGTGGTGAAGGTTAGTTTTGTATACATGTATGAGCTTGGGTTGAGTGGGAAGAACAAGACGAAGAGCAACATCGATAAATCGTTGCTCGATGACGTTGATGACGTTGATGACATAGACTTCTTCAACAGCCGAGATTGGGTTGGAGGGGCTATTTGGGAGCGAACCTTCAGTGGCCTTCAAAAAGCCTTGAGAGACAAGGTTTCCGCATACAAGCAAAAGACTCATGCCGACTAGAAGAACGTGGTTAAGTATAACCTACCAGGCTTCCCTCACGCATTTTAGGTAATGACAATTCGAATAATTTATTGTTGTGTAGTACATCTTTATCTTTGAACTAACTATTTTAATGTTGTAAGATATGGGCATACGAGACCATATCTACAATTGTCGATATAGCTGCGATCCGGCTAAATAAGAATGCGGTGCCCCATTTTCTACGATGAGCATGTACATACTCACTCCCCAGCCGAACACTGCAGATGGATGTTTTTAGCTCTCCTACGATTAGTTATAAACTTTTTACATGTATATTTTTTAGTTTGTATTTTGTATTAGTTTATCCTTAATGGTGCATTATCTGTTCCTGATGCAGACGGTTATCACCATAGTCCTCGCACTGTCGGATGCATAGAGGCAGTATCAAGATACGCTAGTTGCAGAACGAGTTGTGTATGTGGATCGGCTAGATGAGGATAGAGTCCCTAGTCCGAGTCTCACTGGTTCATACTCGAGTGACGATGGAGATTATGTGGATGATCTTGTTTATGAGCATCCATCCATCGTTGCCCAAGAGACACATGTCGACAATAGTGAGGAGCACCCTCTCGCTCCAAATCATCATGAGGAGTGGCCTGTTGATCCTCCAGTTGTATCCAAGAGGAGGGTTTGGAGTGGTGAGCATGACCACACTTTAGTCGATGACCGGGTTGCAAAAGTGGAGGCGAAGGTAGATACGTTGAGGTCTGACTTTGACGAGGTCAAATCCTAGTTGCAGACCATTACGGTGCTACTGAGATCATTATGTTGGGTATGAATTAATTGTCTTAATTAGTTTACTTCTTTAAATTTAAAGCAATTATTATAATGTTTGAATTTGTGTAGGACGTCCCCGATCCCACCACCCACATCGAGACCACTACCACCCATCCTGATAGCACTGCTGAGCTCGAGATCACCATCCATACCAAGACCACTACCACCCATCTTGATACCCCCACCGAGACTGAGACCACCACACCTTCTTATCCTGAGCCTGAGACCACCCATATTGAGTCTGAGACCACCACCCATATTGAGTCTGAGACCACCACCCATCCTGAGCTTGAGACCACCACCCATCTCGAGCCCGAGACCACCCATCCCGATCTCGACACCACCACCACCCATCCTGAGCTTGATACCACTACCACCACCACCCATCCCGAGCCTGATACCACCACCACCATCACCTATCCCAAGACCATCACCCATCTCAATCCTGATACCACCACAACCAACATCATTGATCTCATCATTGCAGACATAGATCCGACCACCACCGATCCCAATCTGGCCACCACCTCTATCGGGCCGATCTCAGTGGCCATTCTTGATCCTTCTGTAAGACATTGAAACATGCAAGTGGAAGCAATTGAATCTTAAACACTCTAATTTGCTTTAATTTGAAAGAAAAACATGCTGAATTTCAAAGGTAAAATAAAGAGCTAAGAAATATCACATTTGTAGCACTAAAAACTTGCAATTTATCCTTCAATTTGATCACA ATGGGGCCGGGGCAGGGCGAGGGGGTTCCCAATGCCTGCCCCGTGGGGGGAATTTACCCCATCCTTGCCCCCGTCCCTGCCATTTGTAGGCAGGGATGGGGGCGAGGATTCCCTGTCGGGGAAACAGGTCCCCGTAGGACCCATTCTTCATTATTCTCTGCGAGAGCAAGCAAGGGAGAGCGAGCGAATCGTTTTCCTGCCCAAGCTACTAGCTTTTCATCACACATTGGAGTTGTGAATCGGCTCATTAAAGAGAAGCTAACAGATGGGCAGCTAGATATGTTTAGGAGGACGGTGTTTGGGAGGTTTGTGGACATGGACATAGTGTTCAACAGTCCATTAGTCCACCATTTTCTGGTGAGGGAGGTACACGTCCAGAACCATAATGATGAGACCATGTACTTCGACCTCAATGGTCATACTGTAAAATTCTTCAAGGACGAATTTCTACTAGTCACTGGACTCTGGAGATCACCAGTGGTAGTTCCTTGCACCGTTGCAACTATCGGTGCACTTAGGACGAAATATTTCCACCGTCTGTGTGAGGCGAAGATACACCTGATCGCCTTTGAGGAGAATTACAAGGGGCTACAATTTGAGACTGACCTAGATGTGGTGAAGGTTAGTTTTGTATACATGTATGAGCTTGGGTTGAGTGGGAAGAACAAGACGAAGAGCAACATCGATAAATCGTTGCTCGATGACGTTGATGACACACATGTCGACAATAGTGAGGAGCACCCTCTCGCTCCAAATCATCATGAGGAGTGGCCTGTTGATCCTCCAGTTGTATCCAAGAGGAGGGTTTGGAGTGGTGAGCATGACCACACTTTAGTCGATGACCGGGTTGCAAAAGTGGAGGCGAAGGTAGATACGTTGAGGACGTCCCCGATCCCACCACCCACATCGAGACCACTACCACCCATCCTGATAGCACTGCTGAGCTCGAGATCACCATCCATACCAAGACCACTACCACCCATCTTGATACCCCCACCGAGACTGAGACCACCACACCTTCTTATCCTGAGCCTGAGACCACCCATATTGAGTCTGAGACCACCACCCATATTGAGTCTGAGACCACCACCCATCCTGAGCTTGAGACCACCACCCATCTCGAGCCCGAGACCACCCATCCCGATCTCGACACCACCACCACCCATCCTGAGCTTGATACCACTACCACCACCACCCATCCCGAGCCTGATACCACCACCACCATCACCTATCCCAAGACCATCACCCATCTCAATCCTGATACCACCACAACCAACATCATTGATCTCATCATTGCAGACATAGATCCGACCACCACCGATCCCAATCTGGCCACCACCTCTATCGGGCCGATCTCAGTGGCCATTCTTGATCCTTCTGTAAGACATTGAAACATGCAAGTGGAAGCAATTGAATCTTAAACACTCTAATTTGCTTTAATTTGAAAGAAAAACATGCTGAATTTCAAAGGTAAAATAAAGAGCTAAGAAATATCACATTTGTAGCACTAAAAACTTGCAATTTATCCTTCAATTTGATCACA ATGGGGCCGGGGCAGGGCGAGGGGGTTCCCAATGCCTGCCCCGTGGGGGGAATTTACCCCATCCTTGCCCCCGTCCCTGCCATTTGTAGGCAGGGATGGGGGCGAGGATTCCCTGTCGGGGAAACAGGTCCCCGTAGGACCCATTCTTCATTATTCTCTGCGAGAGCAAGCAAGGGAGAGCGAGCGAATCGTTTTCCTGCCCAAGCTACTAGCTTTTCATCACACATTGGAGTTGTGAATCGGCTCATTAAAGAGAAGCTAACAGATGGGCAGCTAGATATGTTTAGGAGGACGGTGTTTGGGAGGTTTGTGGACATGGACATAGTGTTCAACAGTCCATTAGTCCACCATTTTCTGGTGAGGGAGGTACACGTCCAGAACCATAATGATGAGACCATGTACTTCGACCTCAATGGTCATACTGTAAAATTCTTCAAGGACGAATTTCTACTAGTCACTGGACTCTGGAGATCACCAGTGGTAGTTCCTTGCACCGTTGCAACTATCGGTGCACTTAGGACGAAATATTTCCACCGTCTGTGTGAGGCGAAGATACACCTGATCGCCTTTGAGGAGAATTACAAGGGGCTACAATTTGAGACTGACCTAGATGTGGTGAAGGTTAGTTTTGTATACATGTATGAGCTTGGGTTGAGTGGGAAGAACAAGACGAAGAGCAACATCGATAAATCGTTGCTCGATGACGTTGATGACACACATGTCGACAATAGTGAGGAGCACCCTCTCGCTCCAAATCATCATGAGGAGTGGCCTGTTGATCCTCCAGTTGTATCCAAGAGGAGGGTTTGGAGTGGTGAGCATGACCACACTTTAGTCGATGACCGGGTTGCAAAAGTGGAGGCGAAGGTAGATACGTTGAGGACGTCCCCGATCCCACCACCCACATCGAGACCACTACCACCCATCCTGATAGCACTGCTGAGCTCGAGATCACCATCCATACCAAGACCACTACCACCCATCTTGATACCCCCACCGAGACTGAGACCACCACACCTTCTTATCCTGAGCCTGAGACCACCCATATTGAGTCTGAGACCACCACCCATATTGAGTCTGAGACCACCACCCATCCTGAGCTTGAGACCACCACCCATCTCGAGCCCGAGACCACCCATCCCGATCTCGACACCACCACCACCCATCCTGAGCTTGATACCACTACCACCACCACCCATCCCGAGCCTGATACCACCACCACCATCACCTATCCCAAGACCATCACCCATCTCAATCCTGATACCACCACAACCAACATCATTGATCTCATCATTGCAGACATAG MGPGQGEGVPNACPVGGIYPILAPVPAICRQGWGRGFPVGETGPRRTHSSLFSARASKGERANRFPAQATSFSSHIGVVNRLIKEKLTDGQLDMFRRTVFGRFVDMDIVFNSPLVHHFLVREVHVQNHNDETMYFDLNGHTVKFFKDEFLLVTGLWRSPVVVPCTVATIGALRTKYFHRLCEAKIHLIAFEENYKGLQFETDLDVVKVSFVYMYELGLSGKNKTKSNIDKSLLDDVDDTHVDNSEEHPLAPNHHEEWPVDPPVVSKRRVWSGEHDHTLVDDRVAKVEAKVDTLRTSPIPPPTSRPLPPILIALLSSRSPSIPRPLPPILIPPPRLRPPHLLILSLRPPILSLRPPPILSLRPPPILSLRPPPISSPRPPIPISTPPPPILSLIPLPPPPIPSLIPPPPSPIPRPSPISILIPPQPTSLISSLQT Homology
BLAST of ClCG09G012000 vs. NCBI nr
Match: XP_008437500.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X1 [Cucumis melo]) HSP 1 Score: 194.1 bits (492), Expect = 2.5e-45 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. NCBI nr
Match: XP_008437501.1 (PREDICTED: uncharacterized protein LOC103482899 isoform X2 [Cucumis melo]) HSP 1 Score: 194.1 bits (492), Expect = 2.5e-45 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 3.2e-45 Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 3.2e-45 Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. NCBI nr
Match: XP_011654656.1 (uncharacterized protein LOC105435430 isoform X1 [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 3.2e-45 Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy Swiss-Prot
Match: Q9LJ64 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PEX1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.3e-04 Identity = 57/142 (40.14%), Postives = 72/142 (50.70%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy Swiss-Prot
Match: Q9XIB6 (Pollen-specific leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PEX2 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.3e-04 Identity = 62/162 (38.27%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.6e-45 Identity = 102/182 (56.04%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 2.0e-45 Identity = 103/182 (56.59%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 5.2e-33 Identity = 90/188 (47.87%), Postives = 118/188 (62.77%), Query Frame = 0
BLAST of ClCG09G012000 vs. TAIR 10
Match: AT1G49490.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 49.3 bits (116), Expect = 9.1e-06 Identity = 62/162 (38.27%), Postives = 83/162 (51.23%), Query Frame = 0
BLAST of ClCG09G012000 vs. TAIR 10
Match: AT3G19020.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 49.3 bits (116), Expect = 9.1e-06 Identity = 57/142 (40.14%), Postives = 72/142 (50.70%), Query Frame = 0
BLAST of ClCG09G012000 vs. TAIR 10
Match: AT4G33970.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 45.1 bits (105), Expect = 1.7e-04 Identity = 60/146 (41.10%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of ClCG09G012000 vs. TAIR 10
Match: AT4G13340.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 43.5 bits (101), Expect = 5.0e-04 Identity = 59/144 (40.97%), Postives = 71/144 (49.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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