ClCG09G011540 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G011540
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 11500085 .. 11500453 (-)
RNA-Seq ExpressionClCG09G011540
SyntenyClCG09G011540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTGCAGCTGCCATTGGAGAGAGCAAAGAAAAAGATGTTGCAATCAAATTTCATGATCACGATGAGTTCATATGGGGAAGAAAGGAGAGAGTAAACCATGGAAGCTTTAGAGGTCCAAAAAAACACCTTCTCAATAAGCCTCACCAATATGAGCCATTTGATCACTCTCAAGACCCTATTCTCTAGAAACCTTTCTTATATATATACTCTTTTGATTTTTGGTTTTTTATTTATTTTTTAGAGGTGGGAGTTACATTGAATCCTTGGGAAACTTCAAGTGATTATTTGTTTATATTTGATTTGGTGTACTTTGATTTGTAA

mRNA sequence

ATGGCCAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTGCAGCTGCCATTGGAGAGAGCAAAGAAAAAGATGTTGCAATCAAATTTCATGATCACGATGAGTTCATATGGGGAAGAAAGGAGAGAGTAAACCATGGAAGCTTTAGAGAGGTGGGAGTTACATTGAATCCTTGGGAAACTTCAAGTGATTATTTGTTTATATTTGATTTGGTGTACTTTGATTTGTAA

Coding sequence (CDS)

ATGGCCAAATTCTCTTTCATTTTCATCTTCATTTTGGCCTTCATTTCAGTTGCAGCTGCCATTGGAGAGAGCAAAGAAAAAGATGTTGCAATCAAATTTCATGATCACGATGAGTTCATATGGGGAAGAAAGGAGAGAGTAAACCATGGAAGCTTTAGAGAGGTGGGAGTTACATTGAATCCTTGGGAAACTTCAAGTGATTATTTGTTTATATTTGATTTGGTGTACTTTGATTTGTAA

Protein sequence

MAKFSFIFIFILAFISVAAAIGESKEKDVAIKFHDHDEFIWGRKERVNHGSFREVGVTLNPWETSSDYLFIFDLVYFDL
Homology
[Close]
BLAST of ClCG09G011540 vs. NCBI nr
Match: KGN60344.1 (hypothetical protein Csa_002159 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 2.9e-13
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0 

Query: 1  MAKFSFIFIFILAFIS--VAAAIGE-SKEKDVAIKFHDHDEFIWGRKERVNHGSFR 54
          MAKFSFI IFILAFIS  VAAAIG+ SK KDVA KFH HDEFIWGRKER+NHGSFR
Sbjct: 1  MAKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFR 56

[Close]
BLAST of ClCG09G011540 vs. ExPASy TrEMBL
Match: A0A0A0LH37 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-13
Identity = 47/56 (83.93%), Postives = 49/56 (87.50%), Query Frame = 0 

Query: 1  MAKFSFIFIFILAFIS--VAAAIGE-SKEKDVAIKFHDHDEFIWGRKERVNHGSFR 54
          MAKFSFI IFILAFIS  VAAAIG+ SK KDVA KFH HDEFIWGRKER+NHGSFR
Sbjct: 1  MAKFSFILIFILAFISVTVAAAIGDMSKGKDVATKFHYHDEFIWGRKERINHGSFR 56

The following BLAST results are available for this feature:
BLAST of ClCG09G011540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60344.12.9e-1383.93hypothetical protein Csa_002159 [Cucumis sativus][more]
BLAST of ClCG09G011540 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG09G011540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH371.4e-1383.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895900 PE=4 SV=1[more]
BLAST of ClCG09G011540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G011540.1ClCG09G011540.1mRNA