ClCG09G006830 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G006830
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionMicrosomal signal peptidase 12 kDa subunit (SPC12)
LocationCG_Chr09: 5910287 .. 5917477 (-)
RNA-Seq ExpressionClCG09G006830
SyntenyClCG09G006830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTAACGAATAATGAAGATATTTTCAGGTGCACAGCATGTAACAAGATTTTTGACATTTTACAAGATATGTTCCAAAACATTTTGATATAATAACAGTAGGCATGTTGTTTAGAAACCTTAACTATATGTTAATTAACTTTGAGCTGCTATTTAATATCATGGATCTAATTTCATACTTTGAGATTTTGGATATATATGGTTATGAGTGGGTGATCCAAAGACATTTGGGAATTATAGTCTTTAGTCTGCCAGCTGTTTCACAATTTTTAACAGTTTAAATTTTATTACCTGTATTATATTAATTTCAATTATATAGAAGTTTAAGTGGAAAAATATGTCTTTCTACACAATATTCTAATGTTTAATATATTCAGATTTGGGAATGAGATGTATGAAGTAAAATGTTCAAATTTTTTAAATTGAAAATTGTTCAACGAAATCTATAATGTAAAATTTATTCAAATGGCCCTTTTCATAGGCCAAATAAAATTTTACTGAACATTTAAAATCACATGCAAAATGATATTTTGGTTGCATCAACAACTCATTTGAACCTAAAATATGTCTTATTTCTTTCTTTGGTTCTTCAATTCACGTTGCTTTCCTTTCATTTCAATTCGTTTCTCTCTGTTATCGCTCTTTTTCTTTCTTGATCTCGTATCTTGGTTTCGCTCTCTCTTCTTGATCTCGCTACGCTCATCTTCTATATTTGATTTTTCAAGGAGGCCAAAAAAATTTGTAGAAAAGAGATAAAAGAGCAAAGCAAGAGTAAGAAATAAAATCCACATTCGAACGTTAGTTCATTGATCATGTTCGTGAATTGAATTAGTAATTTCACAGCACACTCGGGGGCAAATTTCATTAAACAGTGGGTATTTGGGCTAAAAAAAAATAGCCATGGTGCCATTTTCCCATGAATTAGAGAGAAAAATCAAAATACAATTGAAAGATGTCCATAAATTTGTTCCCCAAACTCCCATAAGCAATACCGCCGGCTGATCATTCCCCTTTGGACTGCACATCGTCGTCTCCAAATTGGCCTGCAGGTTATTACTCTCCCTCTCTCATTTTTCAATTTCCTTCTACCTTCCTTTCTATATTTCTAGATCTTCGATTTTCATTATACTTAAATCTGACTAATCTTTCTTCATTGTGTTGGATCTAACGATTATCTTCTCGTTTTCCCTGTTTAAGATGGACTGGGTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAAATTATGTTGGTTGCATTTGCCATGGTGGCCTTTTCAACAGGCTTTGTTATGGGATCGTTTCAAATGATGATCTTGGTTTACGCTGGTGCTGTGTTTCTCACCACATTAATCACTGTTCCAAATTGGCCTTTCTTCAATCACCACCCGCTCAACTGGTTGGATCTTAGTGTGGCTGACAAATACCCTAAGCCGCAATCGCAGGAGCCCGTGATTTTGAAGAAAAAACCTGCTAAGAAGTAGGTTAGTTTGATTGTTGTTGTTCTTGTATTTAACATACTGCTTGAACCATTGAATTTCGAATGTCCCCAAAATGATTATACATACACTTGTTATAATCTTGAAGTTTTAGAGAATTACAGACCTCTTTGATTGATGCCCTTGTCTATTGCTTTACTTTGGTTGGTACTTGTGGGTAGAACCCTTGTGTTCTTCCTGTTCTATGGTTAAAAATAGATTATGATATTCATAATCAACATGTCTATATTGTCATAATAATAAGTTATTGCTTGCTTGCTGCTGTTCCCTGGTTATTATGGCTCCATTTTTGTAACCTTTTTATTTTAAATTAATACTATTTTATCTCAATTTCTTACCTAGATTTGCATCGATGATGTTAAGTAAAAGTGTTGAATTCTTAACCAAATCTAATCAAGAGACCACAACAACCTCAAAAATAGTTCAGGAAAACCATTGAGGCACAAAAGGAATCCGATATCCATCTTCTTCAAAGAGGTCGTCCGATGGGGATGCTCATCGCCTTGTTTGTGAGGCAATTGAGTTTGGTTGTAATGGTCTCATCATGTTAAGACAATCTATGTTTCTAATGCCATTGTTGAATTGAGTGCTGAACATTAATTAAAAATTCTATAAGAACTGGTTTAGATCATGTTTCTTACTCTGGGATAAGGTTTTGTATAGGGTTTCTATGTAGGATAAAATAAAACATTTAGGGGTGTTTATCGCACAAAGTTGAGTTGAATTATGAGTAAATATGTCCTTAAATTATGGTTAATTATTTTAAATGACAAAACTATTCAAAATGTCACTAATAGACATGATAGATGATAGTAGTTCATTAGTGATAGACTTAAGATTTTGTTATATTTGAAAACAACCCTTAAATTAATTGTAGAGCTTAAAAAATTCAAAAAGAAAATTAGACTATACATCCTTTCGATTAGTTTTTCGTTACCAATAGAATTAATTCTCCTTGTCTGTGTATATAAATTTCTCTTTATTATTTAGCATGCCATTCTTTCTCCTTGCCAAGTTTATCAGCTTATTTCTTCTCTTTTATTTTTTCTAGGGACATTTGTTAGTTTTTTACTTTTTGTGAATGCTTACACCATGTGCCCAACGAGAAATTCATCATAATTATTGACAGAGGCTTGGCATCAAATTTGAAATTTGTGTAATCCAAGTTGAACTTTGAACTCATCTCCATGCATTACAAAGAAGCAAGCCCTCCTCCCCCTTCACACCATTTCTAATACTATAAAAGAACCGATATGTTATCTAATCAAACATAATACTATTTTTTTTTTTCACTTTACTCTTTATTTGCATCACGCTCACCAATATTGTGTCAAAAGAACTCAATGCCCTAGACTTCCCGTCCACGCTTTCCCTCTTCTCCTTCCTCTCACATTTCAAAAGGATCAAAACCCTATCAACCATTGTTGCTAGAAATTCTCCCAGCTGTAGCAAAAACCCTCCATAATCACCAATCAAAACGTTCTTGGTCCTTCAAAGAGTGAAGGAAAGAAGACAAAGAAGACTTTTTCGCCCACATTCCTACAATTAAATCAGATGAGAGCAACCTAAACAAAGTTTAACTGGTTAAGATAAGCCACTTATTCAAACTCCCATGTGACCCTATATCCCGCAAACAACAAATAATTCACCACAAAATAACAATAAACTACCAGCTGATTTCCCACCGGACTATAAAGTGAAACATGTAATTGTTTAAATACATCTTCAAAAAAAAAAAAAAAATGTTAACTTGAACGTGCATACATAATGCCATCCCCATTTATGTACTCTAAAATTATTAGTGATCAACTTGAGAACAGAAAGAAGAGATGAGGACCAAGATCATCTTGACGGCTTGGGCTCTATGAGAACAATAAAATCAAACTTCCTTATAATTTATGCAGATTACAAAGCATTTCTAATAATCTCTCAAGTGCCTAAAACAAATAACTCATCAACACCGGCTCTGGAAATAATGTAAAAATAGCATCGTTTAGTCAAGGATCTTCAAAAATTGTTTGGCCACACCTTTGCAATGGGTATTGAAAGAGCTTTCAGGTTGCAGTACCTTCCTCAGCTAATAACTTTAGAAACTACTCCAGCACCAACTGTTCTACCACCTTCCCTCAGGGCAAATCTTTGTCCTGTAAATAATACAACATGAAATTTTAGGGAGTATTGTTGGATAAAAGAACCCCAATAGTAACAGATTCAGATTCAAATATGTTGGTAACATGCAAACAATCAAGGCTGTAAATAATTAAAACATGGAACTTCTCTATATTTTATATTAGAAGCCTAGGCAGACTAATGGCACACCCTTCTTGATCCACAACATTTGATATAAGAAAAAGAACTCAGTAAAGTTTTAAGTACTTTTAAGAAAAGAAGACTCGTTTATTAATTGGAAAACACTATCAAAATCAAAATCTATGGGAGGTATGAGAATAGGGAATTAATTGGCAAACACTATCAAAATCAAAATCTATGGGAGGTTTGAGAATAGGAAATCTTATTCTCCAAATATAGTCTAATGATATTCATCCATCAAGATTTTCTTTCATTAAATGTTCTTTAAATCCAAAGTGTAAATATTTTATTTTTAACAGTATTATTTTCTTGTTTCCAATCCCCTCTCGTGATATTCCTTTTTTCAATGGAAACACTCCTCAGGTAAACATTCTTTTTCTAATAGTAATATTTCGTTGTTTTCAATCTCTAGTGAGGGACTTATCATATATTAAAGAAAAAAAAAAGAGAGAAGTAAATTATTAGCTTAGTCTTTATATCCACAGAGAGTTTAATTGTGACTCACCTGCTTCAAGGGGAACGGGTAAAATCAACTCAAAACCTGCAGTCACATTGTCACCAGGCATAACCATCTTAACATTTTCAGGTAATTCAACCTTTCCAGTGATATCTGCAGTTCTCATGTAAAATTGAGGTCTATAGTTGGACATAAAAGCAGTATGTCGGCCACCTTCCTCCTTTGTGAGAACATATATCTCTGCCTCGAATTTCTTGTAAGTTTTTAGACTTCCAGGCTTTGCAATGACCTACATATAAAGAAATAAAGGAACGTTGCAAACATCCATACTTAGGAGTACAGAATAGAGCCATCTTCAAAATGTTTTCCAGTGAGCATACGGAAATTAAAAGAGAGGAAGAGAATGATTTTCAATGATGTGCATAGAGACGTAGATGACTTAATTAATCTAGTTAGCTTGGAGTAGAGGCTTTCTTATGTTTTTATTTTCTCAGTTAAAGAATACTTTTTCTATTCAAATATGTTTGCAGTACACAACATTATTTTCTCATTTTGCAGTAAAATTTAAATTATGATTGCGTCAATGTGTTAAGGGGCAATAAGGTTTACAAACTAAACCAGCTGAAATCATTCGGATATCAACAAAATAAGAGTGTTTGGATGCCTAATGATAGAAGGATGAGCATGAAATTGTGTTAGAGGCAGAACGGAAGAACCTTCAACCTCATTGTCATAATGTTATCAATAATGATCTTTTTCAAGAGAAGGAATGCAAATTTGACGAAAATGCCAATCTACATACCTGTCCACGTTGAATCTCTTCTCTTTTTAGACCACGGAGAAGGAGACCCACATTGTCACCAGCCTAATTAAACCACAAAATTAACATTAGACAAATATAGTTGAGGAATTTGAACTCATTTGGTAGTCCAATTGGAGGTTCTTTCACTATTTGAGTTTCATTTTTAAAATCAATTTTCATTTCTCGCATTAAAAACACACACACACAAATAGGTGCTAGCTAAATTAGAATCAAAATGCATAAACAGTTATTCATGTTAAGGTAGCTTCTAATTTTCTGGCTTATATTTTATCTGACTTTACTTCTTTTATCGTCTTTTTTGTAAATGCATTCTATTTAAAGAAAAAAATGCCATGTACAAAAATAAAATTTTTTTTCCATTTTTTTTCCTTCATGTTTCTTATCAGAAAAGAAAACAACAGTCAATTACTTGTCCTTGATCCAAGATTTTCTTGAACATCTCAACACCAGTTACAGTAGTTTTCAGAGGAGGTCCCTGCAAAAGACATCACAAAGAAGTACTATCAAAACAATCTTTAATTTTCAGTAACAACACACAATACCTAGCCCCAAGAATGTAATCATCCTAGCTACTTGTAGGTTCAATAGTGGCTCAAAAGTGCCACAAGGTGTGAGTGCCCATGGCCGCACACACAAAACATGGTTAGAAATTGAACATTGTAACATCAATTTACCTGAGTTAACCCCAGAACTTCAACTTCTTCACCAACTTTAATAGTTCCCTGCTCAACACGGCCAGTAGCAACAGTTCCACGACCCTTCAGCAAAAACAGAAAGAATCAAGTTCACTTAAAAAATAGCTCTCCATAAATATTTTAAAAGCAAAACATGAACATTTTATTCAAATTCAAAAGTAAAGTGCAACCATACTCAATATATTAGAATTCCACATTGTGACTTAGTAAAGCAAATCAGACAATCTTGCAAATAAAATGATGGACAACATACAAAAGAAGGAAACTTTTTGCAACTATGGGTACACATGGTACAGTCTACACACAAAAAAAGAATGTTAAGTACTCACTGGCTGTAAGTTCCACTTGGTGATATACAGCCTATTACGAGCAGACTCTCAATTTATTTTGTTTTCTATAAGAGCACGTTCTTAGGAAAATAGTTACAGGAAACAAGGATAAGAGGATGGGAATTCCTCTTACTAAGACAAAATAAATAAATTTCATACAAAGGTTGACCGTCCAGAATAAATCAAGGCAACAGAATGAACTGCAAATCTATCGTCATACAAAACCCAGGGCGAAATTTCCACACCTGAATAGAGAAAACATCTTCTATTGGCATCAGGAAAGGTTTGTCAAGCTGGCGAACAGGGTCAGGAATGTATTCATCAACAGCATCCATTAACTTTAGAATAGCCTGTTTACCAATTTCTTCATTTACACCCTGTAATGCAGATAAAGCTGAACCTCTAATGATGGGAATGTCATCACCAGGGAACTTGTAGAAGCTCAGAAGTTCTGCCAAAAACATAAACCACTATTGAAAATGTTTCCAAGTATTTGTCATCCTGGAACAGTAGCTGCACCAAAATACAACTGTATAATCATACCACGAAGTTCCATTTCCACAAGGTCCAACAGTTCAGGATCATCAACAGCGTCAACTTTATTCAAAAAGCACACAAGTGATGGAACACCAACCTGATTAATGCAATAAAACAAATCTATGGTGCATCAACATTACATCCTGAATTCATATATAAACGAGGCTAAAATCTGCAGAAAACACAATGTGCTCCAAATGAACAAATGTACACCTGCCGTGCTAGTAGAATATGCTCCTTTGTCTGAGGCATGGCCCCATCAGGGCCAGACACAACGAGGATACCACCATCCATTTGAGCAGCTCCAGTAATCATGTTCTGCACCAAGTACCACCATCTTTCACTAATCGTTATAACAACTCAGACAATTAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACTGACATATTTTCACTAATCGTTATAAGAACTCAGACAATGAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACACTGACATATTGTATATCTGTAAATCCGTGTTATAAGTTT

mRNA sequence

ATGCAATACCGCCGGCTGATCATTCCCCTTTGGACTGCACATCGTCGTCTCCAAATTGGCCTGCAGATGGACTGGGTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAAATTATGTTGGTTGCATTTGCCATGGTGGCCTTTTCAACAGGCTTTGTTATGGGATCGTTTCAAATGATGATCTTGGTTTACGCTGGTGCTGTGTTTCTCACCACATTAATCACTGTTCCAAATTGGCCTTTCTTCAATCACCACCCGCTCAACTGGTTGGATCTTAGTGTGGCTGACAAATACCCTAAGCCGCAATCGCAGGAGCCCGTGATTTTGAAGAAAAAACCTGCTAAGAAGGAACTTGTAGAAGCTCAGAAGTTCTGCCAAAAACATAAACCACTATTGAAAATGTTTCCAAGTATTTGTCATCCTGGAACAGTAGCTGCACCAAAATACAACTGTATAATCATACCACGAAGTTCCATTTCCACAAGGTCCAACAGTTCAGGATCATCAACAGCGTCAACTTTATTCAAAAAGCACACAAGTGATGGAACACCAACCTGATTAATGCAATAAAACAAATCTATGGTGCATCAACATTACATCCTGAATTCATATATAAACGAGGCTAAAATCTGCAGAAAACACAATGTGCTCCAAATGAACAAATGTACACCTGCCGTGCTAGTAGAATATGCTCCTTTGTCTGAGGCATGGCCCCATCAGGGCCAGACACAACGAGGATACCACCATCCATTTGAGCAGCTCCAGTAATCATGTTCTGCACCAAGTACCACCATCTTTCACTAATCGTTATAACAACTCAGACAATTAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACTGACATATTTTCACTAATCGTTATAAGAACTCAGACAATGAGAAAAAGTAACCAATGGATGTAATTGGTGTGCCATTGGATGTTAACACTGACATATTGTATATCTGTAAATCCGTGTTATAAGTTT

Coding sequence (CDS)

ATGCAATACCGCCGGCTGATCATTCCCCTTTGGACTGCACATCGTCGTCTCCAAATTGGCCTGCAGATGGACTGGGTAGGGCAAAAGCTAGCGGAGCAGCTGATGCAAATTATGTTGGTTGCATTTGCCATGGTGGCCTTTTCAACAGGCTTTGTTATGGGATCGTTTCAAATGATGATCTTGGTTTACGCTGGTGCTGTGTTTCTCACCACATTAATCACTGTTCCAAATTGGCCTTTCTTCAATCACCACCCGCTCAACTGGTTGGATCTTAGTGTGGCTGACAAATACCCTAAGCCGCAATCGCAGGAGCCCGTGATTTTGAAGAAAAAACCTGCTAAGAAGGAACTTGTAGAAGCTCAGAAGTTCTGCCAAAAACATAAACCACTATTGAAAATGTTTCCAAGTATTTGTCATCCTGGAACAGTAGCTGCACCAAAATACAACTGTATAATCATACCACGAAGTTCCATTTCCACAAGGTCCAACAGTTCAGGATCATCAACAGCGTCAACTTTATTCAAAAAGCACACAAGTGATGGAACACCAACCTGA

Protein sequence

MQYRRLIIPLWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKKELVEAQKFCQKHKPLLKMFPSICHPGTVAAPKYNCIIIPRSSISTRSNSSGSSTASTLFKKHTSDGTPT
Homology
[Close]
BLAST of ClCG09G006830 vs. NCBI nr
Match: KGN51679.1 (hypothetical protein Csa_009252 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-35
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 0 

Query: 10  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFL 69
           L+ A     +   MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFL
Sbjct: 98  LFIARLGFSVSPGMDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFL 157

Query: 70  TTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
           TTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LKKKPAKK
Sbjct: 158 TTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of ClCG09G006830 vs. NCBI nr
Match: XP_004135313.1 (probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 probable signal peptidase complex subunit 1 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 2.8e-35
Identity = 78/93 (83.87%), Postives = 86/93 (92.47%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFLTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S+A+KYPKPQ QEPV+LKKKPAKK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 93

[Close]
BLAST of ClCG09G006830 vs. NCBI nr
Match: XP_008446045.1 (PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446046.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_016900289.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >KAA0034201.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa] >TYK15719.1 putative signal peptidase complex subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-35
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of ClCG09G006830 vs. NCBI nr
Match: XP_038882954.1 (probable signal peptidase complex subunit 1 [Benincasa hispida])

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-34
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQIMLVAFA+VAF TG++MGSF+MMILVYAG V LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIMLVAFAVVAFLTGYIMGSFRMMILVYAGGVVLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S+A+KYPKPQ QEPV+LKKK AKK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVLKKKTAKK 93

[Close]
BLAST of ClCG09G006830 vs. NCBI nr
Match: XP_023549840.1 (probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153.3 bits (386), Expect = 2.0e-33
Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYAG V LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD SVA+KYPKPQ QEPV+LKKKP KK
Sbjct: 61  RHPLKWLDPSVAEKYPKPQPQEPVVLKKKPTKK 93

[Close]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match: Q944J0 (Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=At2g22425 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.9e-22
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N
Sbjct: 1   MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S A+K+PKP+    V  KKK +KK
Sbjct: 61  LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

[Close]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match: Q9D958 (Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3)

HSP 1 Score: 58.9 bits (141), Expect = 6.9e-08
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0 

Query: 22  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFF 81
           QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +
Sbjct: 70  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 129

Query: 82  NHHPLNWL---DLSVADK 97
             HPL WL   DL   DK
Sbjct: 130 RRHPLKWLPVQDLGTEDK 147

[Close]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match: Q3T134 (Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.0e-08
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 22 QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFF 81
          QMD+ GQKLAEQ+ Q +++  A+V F  G++   F   + +       + L+T+P WP +
Sbjct: 11 QMDYKGQKLAEQMFQGIILFSAIVGFIYGYLAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 82 NHHPLNWL---DLSVADKYP 99
            HPL WL   D S  DK P
Sbjct: 71 RRHPLKWLPVQDSSTEDKKP 90

[Close]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match: B0FWK4 (Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 0 

Query: 22 QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFF 81
          QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +
Sbjct: 11 QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 70

Query: 82 NHHPLNWL---DLSVADKYP 99
            HPL WL   D    DK P
Sbjct: 71 RRHPLKWLPVQDSGTEDKKP 90

[Close]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match: Q9Y6A9 (Signal peptidase complex subunit 1 OS=Homo sapiens OX=9606 GN=SPCS1 PE=1 SV=5)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 31/80 (38.75%), Postives = 45/80 (56.25%), Query Frame = 0 

Query: 22  QMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFF 81
           QMD+ GQKLAEQ+ Q +++  A+V F  G+V   F   + +       + L+T+P WP +
Sbjct: 78  QMDYKGQKLAEQMFQGIILFSAIVGFIYGYVAEQFGWTVYIVMAGFAFSCLLTLPPWPIY 137

Query: 82  NHHPLNWL---DLSVADKYP 99
             HPL WL   + S  DK P
Sbjct: 138 RRHPLKWLPVQESSTDDKKP 157

[Close]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match: A0A0A0KS09 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.1e-35
Identity = 80/106 (75.47%), Postives = 90/106 (84.91%), Query Frame = 0 

Query: 10  LWTAHRRLQIGLQMDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFL 69
           L+ A     +   MDW GQKLAEQLMQ+MLVAFA+VAF TG+VMGSF++MILVYAG VFL
Sbjct: 98  LFIARLGFSVSPGMDWQGQKLAEQLMQLMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFL 157

Query: 70  TTLITVPNWPFFNHHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
           TTLITVPNWPFFN HPL WLD S+A+KYPKPQ QEPV+LKKKPAKK
Sbjct: 158 TTLITVPNWPFFNRHPLKWLDPSLAEKYPKPQPQEPVVLKKKPAKK 203

[Close]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match: A0A1S3BET6 (probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488895 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.8e-35
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match: A0A5D3CZV6 (Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002180 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.8e-35
Identity = 79/93 (84.95%), Postives = 85/93 (91.40%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQIMLVAFA+VAF TG+VMGSF+MMILVYAG VFLTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRMMILVYAGGVFLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S+A+KYPKPQ QEPV+ KKKPAKK
Sbjct: 61  RHPLKWLDPSLAEKYPKPQPQEPVVSKKKPAKK 93

[Close]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match: A0A6J1KDF1 (probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111493339 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 75/93 (80.65%), Postives = 82/93 (88.17%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYA  V LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYACGVVLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD SVA+KYPKPQ QEPV+LKKKP KK
Sbjct: 61  RHPLKWLDPSVAEKYPKPQPQEPVVLKKKPTKK 93

[Close]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match: A0A6J1GX63 (probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111458355 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 75/93 (80.65%), Postives = 81/93 (87.10%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQ+MQIMLVAFA+VAF TG+VM SF+MM+LVYAG V LTTLITVPNWPFFN
Sbjct: 1   MDWQGQKLAEQMMQIMLVAFAVVAFLTGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD  VA+KYPKPQ QEPV LKKKP KK
Sbjct: 61  RHPLKWLDPIVAEKYPKPQPQEPVALKKKPTKK 93

[Close]
BLAST of ClCG09G006830 vs. TAIR 10
Match: AT4G40042.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 108.6 bits (270), Expect = 5.4e-24
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKLAEQLMQI+L+  A+V+F  G+   SF+MM+L+YAG V LTTLIT+PNWP FN
Sbjct: 1   MDWQGQKLAEQLMQILLLIAAVVSFVVGYTTASFRMMMLIYAGGVVLTTLITIPNWPCFN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            H L WLD S A+K+PKPQ       KK  +KK
Sbjct: 61  RHHLKWLDPSEAEKHPKPQVVVVSSKKKSSSKK 93

[Close]
BLAST of ClCG09G006830 vs. TAIR 10
Match: AT2G22425.1 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N
Sbjct: 1   MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S A+K+PKP+    V  KKK +KK
Sbjct: 61  LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

[Close]
BLAST of ClCG09G006830 vs. TAIR 10
Match: AT2G22425.2 (Microsomal signal peptidase 12 kDa subunit (SPC12) )

HSP 1 Score: 105.9 bits (263), Expect = 3.5e-23
Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 0 

Query: 23  MDWVGQKLAEQLMQIMLVAFAMVAFSTGFVMGSFQMMILVYAGAVFLTTLITVPNWPFFN 82
           MDW GQKL EQLMQI+LV   +VA   G+   SF+ M+L+YAG V LTTL+TVPNWPF+N
Sbjct: 1   MDWQGQKLVEQLMQILLVISGVVAVVVGYTTESFRTMMLIYAGGVVLTTLVTVPNWPFYN 60

Query: 83  HHPLNWLDLSVADKYPKPQSQEPVILKKKPAKK 116
            HPL WLD S A+K+PKP+    V  KKK +KK
Sbjct: 61  LHPLKWLDPSEAEKHPKPEVVS-VASKKKFSKK 92

The following BLAST results are available for this feature:
BLAST of ClCG09G006830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51679.12.2e-3575.47hypothetical protein Csa_009252 [Cucumis sativus][more]
XP_004135313.12.8e-3583.87probable signal peptidase complex subunit 1 [Cucumis sativus] >XP_031741214.1 pr... [more]
XP_008446045.13.7e-3584.95PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo] >XP_008446... [more]
XP_038882954.15.4e-3482.80probable signal peptidase complex subunit 1 [Benincasa hispida][more]
XP_023549840.12.0e-3381.72probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo][more]
BLAST of ClCG09G006830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q944J04.9e-2260.22Probable signal peptidase complex subunit 1 OS=Arabidopsis thaliana OX=3702 GN=A... [more]
Q9D9586.9e-0839.74Signal peptidase complex subunit 1 OS=Mus musculus OX=10090 GN=Spcs1 PE=2 SV=3[more]
Q3T1349.0e-0838.75Signal peptidase complex subunit 1 OS=Bos taurus OX=9913 GN=SPCS1 PE=3 SV=1[more]
B0FWK41.2e-0738.75Signal peptidase complex subunit 1 OS=Sus scrofa OX=9823 GN=SPCS1 PE=3 SV=1[more]
Q9Y6A91.5e-0738.75Signal peptidase complex subunit 1 OS=Homo sapiens OX=9606 GN=SPCS1 PE=1 SV=5[more]
BLAST of ClCG09G006830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS091.1e-3575.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G589960 PE=3 SV=1[more]
A0A1S3BET61.8e-3584.95probable signal peptidase complex subunit 1 OS=Cucumis melo OX=3656 GN=LOC103488... [more]
A0A5D3CZV61.8e-3584.95Putative signal peptidase complex subunit 1 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1KDF11.1e-3280.65probable signal peptidase complex subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GX631.4e-3280.65probable signal peptidase complex subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC... [more]
BLAST of ClCG09G006830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G40042.15.4e-2460.22Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
AT2G22425.13.5e-2360.22Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
AT2G22425.23.5e-2360.22Microsomal signal peptidase 12 kDa subunit (SPC12) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009542Signal peptidase complex subunit Spc1/SPCS1PFAMPF06645SPC12coord: 23..90
e-value: 5.6E-27
score: 93.6
IPR009542Signal peptidase complex subunit Spc1/SPCS1PANTHERPTHR13202MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNITcoord: 19..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G006830.2ClCG09G006830.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045047 protein targeting to ER
biological_process GO:0006465 signal peptide processing
biological_process GO:0006412 translation
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005787 signal peptidase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003735 structural constituent of ribosome