ClCG09G006100 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G006100
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr09: 5210201 .. 5211595 (+)
RNA-Seq Expression	ClCG09G006100
Synteny	ClCG09G006100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACCATTCGGCGCTCAATTCAGGGCTGAATCAAACAGAATTATCTCTGTTTTCACCACTTCTCTTTCCCAAATTCACATCCCTCAAATTCAAGCTCAACTCATCCTTCAAAACCTCCATTCAAATCCCACCATAGCCCACCAGTTCATTAACACTTGCCATCGTCTTCAACTTCTCGATTCGGCTCTTCTCTTCTTTACCCATATCCCCAACCCCCATGTCTTCGTTTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCGAAATCCCCCATACCCCTCTTTCCATTTACACCCACATGAACAGAAACTCCATTTTCCCCAATAATTACACCTTCCCTTTCCTTCTCAAGTCCTTAGCTGATTTCAACGATTTTGTTGGTGGACAATCTGTTCATACCCATGTTCTGAAATTGGGGTATGTTTCTGATGTTTATGTGATGAATTCTTTGATGGATGTGTATGCGTCGTGTGGGAAAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCATTTGAACAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTGAATGCATTGGCTGCTTGTGCAAACTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAAAGGATGGGAAGTGGATGTGATTTTAGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTTATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAAGCCATTGCTTGGTTTAAGAGAATGGATGAAGGAGGAGTTGAAGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCATTCTGGCTTGGTGGATATGGGCAGGCAGATCTTCCGATCGTTGATGAACGGAAGGTTCGGGTTTTCTCCAGGAATCAAACACTATTCATGTATGGTAGATCTCTTGGCTCGTTATGGGTGCATTGAAGAGGCTTTTGTATTGATAAAGGATATGCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACCAGAAAATAGTGCTTATTATGTTGTGTTATCTAACATCTATGCAGAGATGGAGAAATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTGGGGTCAAGTTCTGTTGAGCTTGAAGAGGCTGTAAAATGTATATGA

mRNA sequence

ATGACACCATTCGGCGCTCAATTCAGGGCTGAATCAAACAGAATTATCTCTGTTTTCACCACTTCTCTTTCCCAAATTCACATCCCTCAAATTCAAGCTCAACTCATCCTTCAAAACCTCCATTCAAATCCCACCATAGCCCACCAGTTCATTAACACTTGCCATCGTCTTCAACTTCTCGATTCGGCTCTTCTCTTCTTTACCCATATCCCCAACCCCCATGTCTTCGTTTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCGAAATCCCCCATACCCCTCTTTCCATTTACACCCACATGAACAGAAACTCCATTTTCCCCAATAATTACACCTTCCCTTTCCTTCTCAAGTCCTTAGCTGATTTCAACGATTTTGTTGGTGGACAATCTGTTCATACCCATGTTCTGAAATTGGGGTATGTTTCTGATGTTTATGTGATGAATTCTTTGATGGATGTGTATGCGTCGTGTGGGAAAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCATTTGAACAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTGAATGCATTGGCTGCTTGTGCAAACTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAAAGGATGGGAAGTGGATGTGATTTTAGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTTATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAAGCCATTGCTTGGTTTAAGAGAATGGATGAAGGAGGAGTTGAAGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCATTCTGGCTTGGTGGATATGGGCAGGCAGATCTTCCGATCGTTGATGAACGGAAGGTTCGGGTTTTCTCCAGGAATCAAACACTATTCATGTATGGTAGATCTCTTGGCTCGTTATGGGTGCATTGAAGAGGCTTTTGTATTGATAAAGGATATGCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACCAGAAAATAGTGCTTATTATGTTGTGTTATCTAACATCTATGCAGAGATGGAGAAATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTGGGGTCAAGTTCTGTTGAGCTTGAAGAGGCTGTAAAATGTATATGA

Coding sequence (CDS)

ATGACACCATTCGGCGCTCAATTCAGGGCTGAATCAAACAGAATTATCTCTGTTTTCACCACTTCTCTTTCCCAAATTCACATCCCTCAAATTCAAGCTCAACTCATCCTTCAAAACCTCCATTCAAATCCCACCATAGCCCACCAGTTCATTAACACTTGCCATCGTCTTCAACTTCTCGATTCGGCTCTTCTCTTCTTTACCCATATCCCCAACCCCCATGTCTTCGTTTGCAATTCCTTAATCAGAGCCTTCTCTCACTCCGAAATCCCCCATACCCCTCTTTCCATTTACACCCACATGAACAGAAACTCCATTTTCCCCAATAATTACACCTTCCCTTTCCTTCTCAAGTCCTTAGCTGATTTCAACGATTTTGTTGGTGGACAATCTGTTCATACCCATGTTCTGAAATTGGGGTATGTTTCTGATGTTTATGTGATGAATTCTTTGATGGATGTGTATGCGTCGTGTGGGAAAATGGGGTTATGCAAGAAGGTGTTCGACGAAATGCCTCAAAGAGATGTTGTGTCGTGGACTGTTTTGATTATGGGTTATCGAGTTGCTTTGATGTTTGATGATGCTTTGATTGCATTTGAACAGATGCAATATGCAGGTGTGGAGCCTAATCGTGTGACGATGGTGAATGCATTGGCTGCTTGTGCAAACTTTGGAGCCATTGAAATGGGTGTTTGGATACATGAGTTTGTGAAGAGGAAAGGATGGGAAGTGGATGTGATTTTAGGGACTTCTTTGATTGATATGTATGGGAAATGTGGGAGAATCAAAGAGGGATTGGTTGTTTTCCAAGCCATGAAAGAGAAGAATGTGTATACATGGAATGCACTTATTAAAGGGCTGGCTTTGGCCAAGAGTGGAGAGGAAGCCATTGCTTGGTTTAAGAGAATGGATGAAGGAGGAGTTGAAGCAGATGAAGTGACATTAGTGGCAGTGCTTTGTGCTTGTAGCCATTCTGGCTTGGTGGATATGGGCAGGCAGATCTTCCGATCGTTGATGAACGGAAGGTTCGGGTTTTCTCCAGGAATCAAACACTATTCATGTATGGTAGATCTCTTGGCTCGTTATGGGTGCATTGAAGAGGCTTTTGTATTGATAAAGGATATGCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACCAGAAAATAGTGCTTATTATGTTGTGTTATCTAACATCTATGCAGAGATGGAGAAATGGAGTGAGGTTGAGAAAGTGAGAGAGATCATGAAAGAGAGAGGACTGAAGAAGGATTTGGGGTCAAGTTCTGTTGAGCTTGAAGAGGCTGTAAAATGTATATGA

Protein sequence

MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAVKCI

Homology

[Close]

BLAST of ClCG09G006100 vs. NCBI nr
Match: XP_038898992.1 (pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida])

HSP 1 Score: 877.5 bits (2266), Expect = 5.2e-251
Identity = 433/464 (93.32%), Postives = 446/464 (96.12%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           MTPF AQFRAESNRI+SVFTTSLS IHIPQIQAQLILQNLHSNPTIAH FINTCH LQLL
Sbjct: 1   MTPFTAQFRAESNRILSVFTTSLSPIHIPQIQAQLILQNLHSNPTIAHHFINTCHHLQLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFF HIP PHVFVCNSLIRAFSHS+IPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL
Sbjct: 61  DSALLFFNHIPKPHVFVCNSLIRAFSHSKIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFND V GQSVHTHVLKLGYV+DVYV NSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT
Sbjct: 121 ADFNDLVSGQSVHTHVLKLGYVADVYVQNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRV+LMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK
Sbjct: 181 VLIMGYRVSLMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
            RMDE GVE DEVTLVAVLCACSHSGLVDMG+QIF+SL + RFGFSPGIKHYSCMVDLLA
Sbjct: 301 NRMDEEGVEPDEVTLVAVLCACSHSGLVDMGKQIFQSLTDRRFGFSPGIKHYSCMVDLLA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVV 420
           RYGCIE AFVLIKDMPFEATKAMWGSLL+GSRAHG LEVSE AA+KLVEMEPEN AYYVV
Sbjct: 361 RYGCIEAAFVLIKDMPFEATKAMWGSLLAGSRAHGGLEVSEIAAKKLVEMEPENGAYYVV 420

Query: 421 LSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAVKCI 465
           LSNIYAEMEKWSEVEKVRE+MKERGLKKDLGSSSVEL+EAVKC+
Sbjct: 421 LSNIYAEMEKWSEVEKVREMMKERGLKKDLGSSSVELQEAVKCL 464

[Close]

BLAST of ClCG09G006100 vs. NCBI nr
Match: XP_008451605.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis melo])

HSP 1 Score: 817.8 bits (2111), Expect = 4.9e-233
Identity = 400/460 (86.96%), Postives = 427/460 (92.83%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M PFG QFRAES RI+S+FTTSLS +HIPQIQAQLIL+NLHS+P IAH FINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSA LFFTHIP PHVF+CNSLIRAF+HS IPHTPLSIYTHMNRNSI PNNYTFPF+LKSL
Sbjct: 61  DSAFLFFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADF D V GQSVHTHV+KLG+ SD+YV N+LMDVYASCGKMGLCKKVFDEM QRDVVSWT
Sbjct: 121 ADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           +LIMGYRV+LM DDALI FEQMQYAGVEPNRVT+VNALAACA+FGAIEMGVWIHEFVK K
Sbjct: 181 ILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKTK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
            WEVDV+LGT+LIDMYGKCGRIKE L VFQAMKEKNVYTWN LI GLALAKSGEEAIAWF
Sbjct: 241 RWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEAD+VTLVAVLCACSHSGLV+ GRQIFRSL++GRFGFSP IKHYSCMVD+LA
Sbjct: 301 KRMDEEGVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVV 420
           R GCIEEAFV+IKDMPFEATKAMWGSLL+GSRAHG+LEVSE AARKLVEMEPEN AYYVV
Sbjct: 361 RNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEMEPENGAYYVV 420

Query: 421 LSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEA 461
           LSNIYAEM KWSEVEKVREIMKERGLKKDLGSSSVEL+EA
Sbjct: 421 LSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQEA 460

[Close]

BLAST of ClCG09G006100 vs. NCBI nr
Match: XP_023548659.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo] >XP_023548660.1 pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 804.3 bits (2076), Expect = 5.6e-229
Identity = 398/457 (87.09%), Postives = 425/457 (93.00%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALLFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMG+WIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGIWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGV+ADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEDGGVKADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYV 420
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEMEPEN AYY 
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 457
           VLSNI AEM KW+EVEKVR+IMK  GLKKDLGSSSVE
Sbjct: 421 VLSNICAEMGKWNEVEKVRKIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of ClCG09G006100 vs. NCBI nr
Match: XP_022991568.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima])

HSP 1 Score: 800.8 bits (2067), Expect = 6.1e-228
Identity = 397/457 (86.87%), Postives = 421/457 (92.12%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNR SI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIH FVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGVEADEVTLV VLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYV 420
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEMEPEN AYY 
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 457
           VLSNI AEM KW+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of ClCG09G006100 vs. NCBI nr
Match: KAG6575842.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014378.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 800.4 bits (2066), Expect = 8.0e-228
Identity = 397/457 (86.87%), Postives = 423/457 (92.56%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IP TPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRM-DEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRM +EGG+EADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYV 420
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEMEPEN AYY 
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 457
           VLSNI AEM KW+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 1.6e-85
Identity = 179/485 (36.91%), Postives = 272/485 (56.08%), Query Frame = 0


Query: 19  FTTSLSQIH------IPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPN 78
           F TSL +IH      + Q    +I+  L+ +     +FI  C     L  A   FTH P 
Sbjct: 17  FVTSL-KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC 76

Query: 79  PHVFVCNSLIRAFSHSEIPHT---PLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGG 138
           P+ ++ N++IRA S  + P+     +++Y  +      P+ +TFPF+LK     +D   G
Sbjct: 77  PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 136

Query: 139 QSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDV------------- 198
           + +H  V+  G+ S V+V+  L+ +Y SCG +G  +K+FDEM  +DV             
Sbjct: 137 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 196

Query: 199 --------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVN 258
                               VSWT +I GY  +    +A+  F++M    VEP+ VT++ 
Sbjct: 197 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 256

Query: 259 ALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKN 318
            L+ACA+ G++E+G  I  +V  +G    V L  ++IDMY K G I + L VF+ + E+N
Sbjct: 257 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 316

Query: 319 VYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFR 378
           V TW  +I GLA    G EA+A F RM + GV  ++VT +A+L ACSH G VD+G+++F 
Sbjct: 317 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 376

Query: 379 SLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGS 438
           S M  ++G  P I+HY CM+DLL R G + EA  +IK MPF+A  A+WGSLL+ S  H  
Sbjct: 377 S-MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 436

Query: 439 LEVSETAARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 462
           LE+ E A  +L+++EP NS  Y++L+N+Y+ + +W E   +R +MK  G+KK  G SS+E
Sbjct: 437 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 496

[Close]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 9.0e-81
Identity = 174/494 (35.22%), Postives = 263/494 (53.24%), Query Frame = 0


Query: 1   MTPFGAQFRAESN--RIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC---H 60
           M      F  E N    +S       Q  + QI A+++   L  +     +F++ C    
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  RLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPF 120
               L  A + F     P  F+ N +IR FS S+ P   L +Y  M  +S   N YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYA------------------- 180
           LLK+ ++ + F     +H  + KLGY +DVY +NSL++ YA                   
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 ------------SCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQY 240
                         GKM +   +F +M +++ +SWT +I GY  A M  +AL  F +MQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKE 300
           + VEP+ V++ NAL+ACA  GA+E G WIH ++ +    +D +LG  LIDMY KCG ++E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 GLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSH 360
            L VF+ +K+K+V  W ALI G A    G EAI+ F  M + G++ + +T  AVL ACS+
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360

Query: 361 SGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMW 420
           +GLV+ G+ IF S M   +   P I+HY C+VDLL R G ++EA   I++MP +    +W
Sbjct: 361 TGLVEEGKLIFYS-MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 420

Query: 421 GSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKER 459
           G+LL   R H ++E+ E     L+ ++P +   YV  +NI+A  +KW +  + R +MKE+
Sbjct: 421 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 480

[Close]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.0e-80
Identity = 173/478 (36.19%), Postives = 270/478 (56.49%), Query Frame = 0


Query: 15  IISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPH 74
           +ISV  +  +  H+P I A++I      +  +  + I  C  L  +D A   F+++ NP+
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91

Query: 75  VFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHT 134
           V++  ++I  F  S      +S+Y  M  NS+ P+NY    +LK+     D    + +H 
Sbjct: 92  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 151

Query: 135 HVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGY------RV 194
            VLKLG+ S   V   +M++Y   G++   KK+FDEMP RD V+ TV+I  Y      + 
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 211

Query: 195 AL-MFDD------------------------ALIAFEQMQYAGVEPNRVTMVNALAACAN 254
           AL +F D                        AL  F +MQ   V  N  T V  L+AC++
Sbjct: 212 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 271

Query: 255 FGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNAL 314
            GA+E+G W+H FV+ +  E+   +G +LI+MY +CG I E   VF+ M++K+V ++N +
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331

Query: 315 IKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRF 374
           I GLA+  +  EAI  F+ M   G   ++VTLVA+L ACSH GL+D+G ++F S M   F
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS-MKRVF 391

Query: 375 GFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETA 434
              P I+HY C+VDLL R G +EEA+  I+++P E    M G+LLS  + HG++E+ E  
Sbjct: 392 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 451

Query: 435 ARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAV 462
           A++L E E  +S  YV+LSN+YA   KW E  ++RE M++ G++K+ G S++E++  +
Sbjct: 452 AKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQI 504

[Close]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.6e-80
Identity = 188/586 (32.08%), Postives = 278/586 (47.44%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC--HRLQLLDSALLFFTHI 72
           N ++S+       +H+ QIQAQ+I+  L  +P  + + I  C     + LD ++     I
Sbjct: 54  NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113

Query: 73  PNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIF---PNNYTFPFLLKSLADFNDFV 132
            NP++F  N  IR FS SE P     +Y  M R+      P+++T+P L K  AD     
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173

Query: 133 GGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYR 192
            G  +  HVLKL      +V N+ + ++ASCG M   +KVFDE P RD+VSW  LI GY+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233

Query: 193 V----------------------------------------------------------- 252
                                                                       
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293

Query: 253 ---ALM----------------------------------------------FD------ 312
              ALM                                              FD      
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353

Query: 313 ------------------DALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHE 372
                             DAL  F++MQ +  +P+ +TM++ L+AC+  GA+++G+WIH 
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413

Query: 373 FVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEE 432
           ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GLAL      
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473

Query: 433 AIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCM 462
           AI++F  M + G+  DE+T + +L AC H G++  GR  F S M  RF  +P +KHYS M
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF-SQMKSRFNLNPQLKHYSIM 533

[Close]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.6e-80
Identity = 165/459 (35.95%), Postives = 258/459 (56.21%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQL------LDSALLF 72
           + ++S+  +S  ++H+ QI A L+  +L  N  + H F++   RL L      ++ +   
Sbjct: 12  DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLS---RLALSLIPRDINYSCRV 71

Query: 73  FTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFP-NNYTFPFLLKSLADFND 132
           F+   NP +  CN++IRAFS S+ P     ++  + RNS  P N  +  F LK      D
Sbjct: 72  FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 131

Query: 133 FVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMG 192
            +GG  +H  +   G++SD  +M +LMD+Y++C       KVFDE+P+RD VSW VL   
Sbjct: 132 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 191

Query: 193 YRVALMFDDALIAFEQMQY---AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGW 252
           Y       D L+ F++M+      V+P+ VT + AL ACAN GA++ G  +H+F+   G 
Sbjct: 192 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 251

Query: 253 EVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKR 312
              + L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F  
Sbjct: 252 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 311

Query: 313 MDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARY 372
           M + G+  +E TL  +L ACSHSGLV  G   F  + +G F   P + HY C+VDLL R 
Sbjct: 312 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 371

Query: 373 GCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVVLS 432
             +++A+ LIK M  +    +W +LL   R HG +E+ E     L+E++ E +  YV+L 
Sbjct: 372 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLL 431

Query: 433 NIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAV 462
           N Y+ + KW +V ++R +MKE+ +    G S++EL+  V
Sbjct: 432 NTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467

[Close]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL
Match: A0A1S3BRY1 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=3656 GN=LOC103492838 PE=4 SV=1)

HSP 1 Score: 817.8 bits (2111), Expect = 2.4e-233
Identity = 400/460 (86.96%), Postives = 427/460 (92.83%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M PFG QFRAES RI+S+FTTSLS +HIPQIQAQLIL+NLHS+P IAH FINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSA LFFTHIP PHVF+CNSLIRAF+HS IPHTPLSIYTHMNRNSI PNNYTFPF+LKSL
Sbjct: 61  DSAFLFFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADF D V GQSVHTHV+KLG+ SD+YV N+LMDVYASCGKMGLCKKVFDEM QRDVVSWT
Sbjct: 121 ADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           +LIMGYRV+LM DDALI FEQMQYAGVEPNRVT+VNALAACA+FGAIEMGVWIHEFVK K
Sbjct: 181 ILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKTK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
            WEVDV+LGT+LIDMYGKCGRIKE L VFQAMKEKNVYTWN LI GLALAKSGEEAIAWF
Sbjct: 241 RWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEAD+VTLVAVLCACSHSGLV+ GRQIFRSL++GRFGFSP IKHYSCMVD+LA
Sbjct: 301 KRMDEEGVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVV 420
           R GCIEEAFV+IKDMPFEATKAMWGSLL+GSRAHG+LEVSE AARKLVEMEPEN AYYVV
Sbjct: 361 RNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEMEPENGAYYVV 420

Query: 421 LSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEA 461
           LSNIYAEM KWSEVEKVREIMKERGLKKDLGSSSVEL+EA
Sbjct: 421 LSNIYAEMGKWSEVEKVREIMKERGLKKDLGSSSVELQEA 460

[Close]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL
Match: A0A6J1JWL5 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima OX=3661 GN=LOC111488140 PE=4 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 3.0e-228
Identity = 397/457 (86.87%), Postives = 421/457 (92.12%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNR SI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIH FVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGVEADEVTLV VLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYV 420
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEMEPEN AYY 
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 457
           VLSNI AEM KW+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL
Match: A0A6J1D9C2 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 392/464 (84.48%), Postives = 425/464 (91.59%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M P  AQ  A+SNRI+S+   SLS IHIPQIQ+QLILQNLHS+  IAH FIN CH L+LL
Sbjct: 3   MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 62

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFTH PNPHVFV NSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 63  DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 122

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           +DFND VGGQSVHTHV+K G+VSDVYV NSLMDVYASCG+MGLC+KVFDEMPQRDVVSWT
Sbjct: 123 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 182

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR+
Sbjct: 183 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 242

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAWF
Sbjct: 243 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 302

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEADEVTLVAVLCACSHSGLV+ GR+IFR+L++G +GFSPGIKH+SCMVDLLA
Sbjct: 303 KRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLLA 362

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVV 420
           R GCIEEAFVLIKDMPF+ATKAMWGSLL+G RA+GSLEVSE AARKLVEMEPEN AYYVV
Sbjct: 363 RSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYVV 422

Query: 421 LSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAVKCI 465
           LSNI AEM +W EVE+VR+IM+ERGLKKD GSSSVEL+E  +C+
Sbjct: 423 LSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVELQEVGRCL 466

[Close]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL
Match: A0A6J1D8G0 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 2.5e-227
Identity = 392/464 (84.48%), Postives = 425/464 (91.59%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M P  AQ  A+SNRI+S+   SLS IHIPQIQ+QLILQNLHS+  IAH FIN CH L+LL
Sbjct: 87  MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 146

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFTH PNPHVFV NSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 147 DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 206

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           +DFND VGGQSVHTHV+K G+VSDVYV NSLMDVYASCG+MGLC+KVFDEMPQRDVVSWT
Sbjct: 207 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 266

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR+
Sbjct: 267 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 326

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAWF
Sbjct: 327 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 386

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEADEVTLVAVLCACSHSGLV+ GR+IFR+L++G +GFSPGIKH+SCMVDLLA
Sbjct: 387 KRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLLA 446

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVV 420
           R GCIEEAFVLIKDMPF+ATKAMWGSLL+G RA+GSLEVSE AARKLVEMEPEN AYYVV
Sbjct: 447 RSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEMEPENGAYYVV 506

Query: 421 LSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAVKCI 465
           LSNI AEM +W EVE+VR+IM+ERGLKKD GSSSVEL+E  +C+
Sbjct: 507 LSNILAEMGRWGEVEEVRDIMRERGLKKDSGSSSVELQEVGRCL 550

[Close]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL
Match: A0A6J1GP72 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata OX=3662 GN=LOC111456251 PE=4 SV=1)

HSP 1 Score: 793.1 bits (2047), Expect = 6.2e-226
Identity = 395/457 (86.43%), Postives = 421/457 (92.12%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IP TPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGV PNRVTMVNALAACA+FGAIEMGVWIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVVPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRM-DEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRM +EGG+EADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYV 420
           AR G IEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEMEPEN AYY 
Sbjct: 361 ARSGRIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEMEPENGAYYA 420

Query: 421 VLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 457
           VLSNI AEM KW+EVEKVREIMK  GLKKDLGSSSVE
Sbjct: 421 VLSNICAEMGKWNEVEKVREIMKVEGLKKDLGSSSVE 457

[Close]

BLAST of ClCG09G006100 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 318.2 bits (814), Expect = 1.1e-86
Identity = 179/485 (36.91%), Postives = 272/485 (56.08%), Query Frame = 0


Query: 19  FTTSLSQIH------IPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPN 78
           F TSL +IH      + Q    +I+  L+ +     +FI  C     L  A   FTH P 
Sbjct: 17  FVTSL-KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC 76

Query: 79  PHVFVCNSLIRAFSHSEIPHT---PLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGG 138
           P+ ++ N++IRA S  + P+     +++Y  +      P+ +TFPF+LK     +D   G
Sbjct: 77  PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 136

Query: 139 QSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDV------------- 198
           + +H  V+  G+ S V+V+  L+ +Y SCG +G  +K+FDEM  +DV             
Sbjct: 137 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 196

Query: 199 --------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVN 258
                               VSWT +I GY  +    +A+  F++M    VEP+ VT++ 
Sbjct: 197 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 256

Query: 259 ALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKN 318
            L+ACA+ G++E+G  I  +V  +G    V L  ++IDMY K G I + L VF+ + E+N
Sbjct: 257 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 316

Query: 319 VYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFR 378
           V TW  +I GLA    G EA+A F RM + GV  ++VT +A+L ACSH G VD+G+++F 
Sbjct: 317 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 376

Query: 379 SLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGS 438
           S M  ++G  P I+HY CM+DLL R G + EA  +IK MPF+A  A+WGSLL+ S  H  
Sbjct: 377 S-MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 436

Query: 439 LEVSETAARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVE 462
           LE+ E A  +L+++EP NS  Y++L+N+Y+ + +W E   +R +MK  G+KK  G SS+E
Sbjct: 437 LELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIE 496

[Close]

BLAST of ClCG09G006100 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 302.4 bits (773), Expect = 6.4e-82
Identity = 174/494 (35.22%), Postives = 263/494 (53.24%), Query Frame = 0


Query: 1   MTPFGAQFRAESN--RIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC---H 60
           M      F  E N    +S       Q  + QI A+++   L  +     +F++ C    
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  RLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPF 120
               L  A + F     P  F+ N +IR FS S+ P   L +Y  M  +S   N YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYA------------------- 180
           LLK+ ++ + F     +H  + KLGY +DVY +NSL++ YA                   
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 ------------SCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQY 240
                         GKM +   +F +M +++ +SWT +I GY  A M  +AL  F +MQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKE 300
           + VEP+ V++ NAL+ACA  GA+E G WIH ++ +    +D +LG  LIDMY KCG ++E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 GLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSH 360
            L VF+ +K+K+V  W ALI G A    G EAI+ F  M + G++ + +T  AVL ACS+
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360

Query: 361 SGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMW 420
           +GLV+ G+ IF S M   +   P I+HY C+VDLL R G ++EA   I++MP +    +W
Sbjct: 361 TGLVEEGKLIFYS-MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 420

Query: 421 GSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKER 459
           G+LL   R H ++E+ E     L+ ++P +   YV  +NI+A  +KW +  + R +MKE+
Sbjct: 421 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQ 480

[Close]

BLAST of ClCG09G006100 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-81
Identity = 173/478 (36.19%), Postives = 270/478 (56.49%), Query Frame = 0


Query: 15  IISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPH 74
           +ISV  +  +  H+P I A++I      +  +  + I  C  L  +D A   F+++ NP+
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91

Query: 75  VFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHT 134
           V++  ++I  F  S      +S+Y  M  NS+ P+NY    +LK+     D    + +H 
Sbjct: 92  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 151

Query: 135 HVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGY------RV 194
            VLKLG+ S   V   +M++Y   G++   KK+FDEMP RD V+ TV+I  Y      + 
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 211

Query: 195 AL-MFDD------------------------ALIAFEQMQYAGVEPNRVTMVNALAACAN 254
           AL +F D                        AL  F +MQ   V  N  T V  L+AC++
Sbjct: 212 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 271

Query: 255 FGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNAL 314
            GA+E+G W+H FV+ +  E+   +G +LI+MY +CG I E   VF+ M++K+V ++N +
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331

Query: 315 IKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRF 374
           I GLA+  +  EAI  F+ M   G   ++VTLVA+L ACSH GL+D+G ++F S M   F
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS-MKRVF 391

Query: 375 GFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETA 434
              P I+HY C+VDLL R G +EEA+  I+++P E    M G+LLS  + HG++E+ E  
Sbjct: 392 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 451

Query: 435 ARKLVEMEPENSAYYVVLSNIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAV 462
           A++L E E  +S  YV+LSN+YA   KW E  ++RE M++ G++K+ G S++E++  +
Sbjct: 452 AKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQI 504

[Close]

BLAST of ClCG09G006100 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-81
Identity = 188/586 (32.08%), Postives = 278/586 (47.44%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC--HRLQLLDSALLFFTHI 72
           N ++S+       +H+ QIQAQ+I+  L  +P  + + I  C     + LD ++     I
Sbjct: 54  NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113

Query: 73  PNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIF---PNNYTFPFLLKSLADFNDFV 132
            NP++F  N  IR FS SE P     +Y  M R+      P+++T+P L K  AD     
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173

Query: 133 GGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYR 192
            G  +  HVLKL      +V N+ + ++ASCG M   +KVFDE P RD+VSW  LI GY+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233

Query: 193 V----------------------------------------------------------- 252
                                                                       
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293

Query: 253 ---ALM----------------------------------------------FD------ 312
              ALM                                              FD      
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353

Query: 313 ------------------DALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHE 372
                             DAL  F++MQ +  +P+ +TM++ L+AC+  GA+++G+WIH 
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413

Query: 373 FVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEE 432
           ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GLAL      
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473

Query: 433 AIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCM 462
           AI++F  M + G+  DE+T + +L AC H G++  GR  F S M  RF  +P +KHYS M
Sbjct: 474 AISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYF-SQMKSRFNLNPQLKHYSIM 533

[Close]

BLAST of ClCG09G006100 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-81
Identity = 165/459 (35.95%), Postives = 258/459 (56.21%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQL------LDSALLF 72
           + ++S+  +S  ++H+ QI A L+  +L  N  + H F++   RL L      ++ +   
Sbjct: 12  DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLS---RLALSLIPRDINYSCRV 71

Query: 73  FTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFP-NNYTFPFLLKSLADFND 132
           F+   NP +  CN++IRAFS S+ P     ++  + RNS  P N  +  F LK      D
Sbjct: 72  FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 131

Query: 133 FVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMG 192
            +GG  +H  +   G++SD  +M +LMD+Y++C       KVFDE+P+RD VSW VL   
Sbjct: 132 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 191

Query: 193 YRVALMFDDALIAFEQMQY---AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGW 252
           Y       D L+ F++M+      V+P+ VT + AL ACAN GA++ G  +H+F+   G 
Sbjct: 192 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 251

Query: 253 EVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKR 312
              + L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F  
Sbjct: 252 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 311

Query: 313 MDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARY 372
           M + G+  +E TL  +L ACSHSGLV  G   F  + +G F   P + HY C+VDLL R 
Sbjct: 312 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 371

Query: 373 GCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEPENSAYYVVLS 432
             +++A+ LIK M  +    +W +LL   R HG +E+ E     L+E++ E +  YV+L 
Sbjct: 372 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLL 431

Query: 433 NIYAEMEKWSEVEKVREIMKERGLKKDLGSSSVELEEAV 462
           N Y+ + KW +V ++R +MKE+ +    G S++EL+  V
Sbjct: 432 NTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTV 467

The following BLAST results are available for this feature:

BLAST of ClCG09G006100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898992.1	5.2e-251	93.32	pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida]	[more]
XP_008451605.1	4.9e-233	86.96	PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis m...	[more]
XP_023548659.1	5.6e-229	87.09	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp...	[more]
XP_022991568.1	6.1e-228	86.87	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima]	[more]
KAG6575842.1	8.0e-228	86.87	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of ClCG09G006100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMA1	1.6e-85	36.91	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	9.0e-81	35.22	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FIF7	2.0e-80	36.19	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]
Q9SJZ3	2.6e-80	32.08	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9SN85	2.6e-80	35.95	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]

BLAST of ClCG09G006100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRY1	2.4e-233	86.96	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=36...	[more]
A0A6J1JWL5	3.0e-228	86.87	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima O...	[more]
A0A6J1D9C2	2.5e-227	84.48	pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordi...	[more]
A0A6J1D8G0	2.5e-227	84.48	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordi...	[more]
A0A6J1GP72	6.2e-226	86.43	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata...	[more]

BLAST of ClCG09G006100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56310.1	1.1e-86	36.91	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	6.4e-82	35.22	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G59200.1	1.4e-81	36.19	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G22410.1	1.9e-81	32.08	SLOW GROWTH 1	[more]
AT3G47530.1	1.9e-81	35.95	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 351..375 e-value: 0.017 score: 15.3 coord: 177..207 e-value: 0.0022 score: 18.1 coord: 147..175 e-value: 1.4E-4 score: 21.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 147..176 e-value: 8.2E-4 score: 17.4 coord: 250..277 e-value: 3.7E-4 score: 18.5 coord: 278..312 e-value: 1.5E-6 score: 26.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 275..322 e-value: 5.5E-8 score: 32.9
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 9.832344
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..275 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 10.676364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..174 score: 8.747175
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 250..463 e-value: 6.5E-38 score: 132.8 coord: 91..244 e-value: 1.7E-27 score: 98.6
None	No IPR available	PANTHER	PTHR47924:SF31	SUBFAMILY NOT NAMED	coord: 6..459
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 6..459

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G006100.1	ClCG09G006100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding