ClCG09G005150 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G005150
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionSmall COPII coat GTPase SAR1
LocationCG_Chr09: 4535937 .. 4543108 (+)
RNA-Seq ExpressionClCG09G005150
SyntenyClCG09G005150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCGAAATATACATTAAAAAAAAAAAAAAGGAGAAAATTCCATTCCATTCCATTGCATTCGATTTCCAACTCCAATTTCCAACCAGGTTTTGGAAGTTCCGTAGTTGTGAATTTTTCTTTCTCTAGCCTGCCCTTCTGCTGAGGATTCTCTTCTCAATCCGAGTGACAAACCCAAACAATCGGCGAGCTCGTTGTTGCTGGTGCCGACTCTGATCGATTCTCGGACCCCTTCTTTCACCGGTATCCTCGATTATGTTTCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTTGGCCTCGATAATGCCGGAAAGACCACCTTGCTCCACATGTTGAAAGATGAGGTCTCTCTTCTCTCTCTCATCATTCTTTTTCTTTTCGGGATTGTTATTTTATGCGACTTAGCTTCCTTTACCGGTGAATTCTTATGTGTTTTTTTTTTTCTGAAAATTGTTGATCGGTGAGATGAGACCAGAGATTGAAGAGTTATGTTTGGTTGTTAGCAAGTCTTGCGTGAATAATATAGGTTGAATTTCTTAGTAGATGTATATATTTCTGCTATTTCATGAGGCAGAACAATTCGATTACATGAGCTGGAAATCGTTCATAGCTTTATTCTGGTGCTCGGTTTAGACGCACAAATCTTATTTATTATTTGTGATCTTTTTTTTTCCTGAATTGGTCTGGTGTGATGACGCTGTTTCTTATATGCTTCAGAGGTTAGTACAACATCAGCCAACACAGTATCCTACATCAGAGGAGTTGAGCATCGGAAAAATTAAGTTTAAGGCGTTTGATTTGGGAGGTCACCAGATTGCTCGTAGAGTTTGGAAGGACTACTATGCTAAGGCAAGCTAATTCTGCATACTCTTGTCTTTCTCTTATGTTAATGGGGTGTATGTTTTAAAGGGAGTTTAAAAAATATATTCATTTCAGATGATTATTCACATGAATTAGATGCAAATTTACAGGAACATTTGACTAAGCGGGTAAGGGCCATGGTTCCTGTGGTTTTGTAGCTTGATTCAGTATGGGACTTTTTTGGAAGGATATTCAACATTTAATTATGTTTTTGGCATTTTAGGGCACAATTTGAGAATTCTTCTCTGTGTTTATCAAGCAAGATAAAATTGTATATGGTAACTTTTTTCCTCGTGAAATTTGAAGATGAAATAAGAACCTTGTTTGATAATTATTTTTGTTTCAAGAAAAACTCGAATATCAAGAAAAGCACAGATTTAATTGATGTTCATTTTGATAAAATATATTTAATATTTCTGTTTCATTCTCAAGTTTTAGGATTTGTATGAACCTTGACATAGGAAACTTGGGAGCATATTCTTTTACATCCAAGATTTAAACTTGAGGTTCTTGACTGATACTTTTTCACCTAGGCATATCAATTCCAACTCTTTCCTACTGTTTTGTACTTTTGTGCTGAGATGCCTCTACTGCATTTTGTATCTTCTGATCTTCCTTCCATTTGTTCCCCAATACATATTACTTTTATGAAGTGATCGATTTTTATGTTCAAGACAAAAGAAGTGAAATAAGCTCTCTGGGAGAGCTTTATAAGAGCGTACTGCTGGACCATTTGGCTAGAGAGGAAGAGGAGGATTTCTTGGATGAGAATCTTCCCTATCACCGTTTTGTTTAGGTCTCCCCTTCTCCACTCCAATTGGAGAGGTCTTTTGTAATCCGCCACATGGGGTTTTCCTCATTTATAATTTCATACTATCAATGAAATTGTTTCTTACCTAAAAGAAATTTTGTGTTCAAGACTAGTCTAGTCCAGAGAAATCTGATCATAACAATCACGATGTAATAGCTAGACTAAGAATGACTAACCAATCCAGTAGAATTTAACAGAAATAATTTATTTTGTGTGTCATGTAGCTTGAGGGGTGGCAGATAAGTTAGAATTGAGGAAAGAAAAGGGAATCCCAATTTTGTATTATTTGGGAATGATTCAGCTGAAATGGCTTAGGACAGCTACTGGAGAAGTGATTGCAACCCTTGGAATAAAAATGTTTCAAGAAGACAAGATGGAAAGGGGGGTCAATATGATTTCAGAAACTTTTCTAACAAAAGAGGGTGGAGCTTAGAAATGTTTACTTCGTCAAATTAATGTGAGAGGAGAAGCTTGGTCATTTCAGCTGGACAAAATCACAATGGATGGATTGGAGTCCCTTTCTTTTATTGGGCGCTTCTTGTTTGGCGACACCCTTGTATATTCTTTCTTGCTTCTCTAAGAAAGCTTGGTTTTCTGGTTAGGAAAAAAAAAAGAGATAGAAGTCCTTTCTGAAATTATTGAACGACTTCCTCTCTAATGCTGAAGGTAAATGAAAGGATGAGATTGTAAATGGAGGTAATTAATCATATGTTGATGTGGTTGTAAAGGGAAGAGCAAAGATATTGTCTGGAGTCGGAGGTTTGATAGGGTGACTTATGAGAGAGCAATTATTCTTACCAATTTATGTTTCCATGTAATTGGTATTTGGTATGACATTTAAATTACTAATAAGGATTGTTTGCTAAACTGTAAATCCGTTCCAGCTAGACGAGACCTTGCTCTGGTGTACTAGTGTAGATGAAGCAAGAACTCTGTGCAGCAGTGGAGGCTTGTCTCAAGAGTGGGCAAGTTTTTATGTCAATTGCAAGTGGCGGGATAGATATAAACATAGTAGAGCCAAAGTCGTTCCATTCTTGGTGGCTGGATTAAACTGGGGGAGCTACCCATTGTCTTCCTGGAACAAGGCAATGATCGGAAATAAATGTGTGGGTTCAATATTTGAGAGGCTTGCAGTGAAGCAACAGAACTATTCTGGATTCATTCTTGCGGAAATTAAGGGAGTAGGTGCTAGTGGTTGTGTTCTTAACGTTCCATGGTACGGTGCTTTCCCCTAGGTCGCTTCTGACAAGGAGATTGCCGGAAGTTCAAAATGTTTTCCAAAGGAAGCTGCGGTCAGGTTATATGATCCCAATGAGTGCCCTTGTCCGACAGACTGATAATAGTAAAGTTGGATTGAGCTGGATAAAAGATTCAGGAAAATTGGAAATAATAGAAAAAGTTCAAAAAATGTTGGCCGTTAAAGGTAGAAGGCATGCGGATGATTCGGAGGGATCTTAACCTTGTGGACTAAAAAAGAAAGTCGTTTGGTGGTTTCATAAAGGGGCTTCTTTCTGTTACAAATAAAAATATAAAATGTGAGTTAGGGGATGGTAAATTGCTTGGATCTTGAACATTAATGGTCCACTATCATGTATTCTGGTGGTTGAGGCCAGAGGGGGACAATTTTAATATAGTACTTTGGTCAAACGAAAAATCAAACGGGAAAGAAAAACATGTTCTATGGATAAATATTGTGAAATTATTTAGTGTCGTCCTTGTCAAACTATTGATAATCTAGATTGATTGAAATTCCTCCTAACCATGGATATTTTTACACAGTCCAATGTGATTGCCATTACTTGACAAGTATTATAGTTTGTTTGGAATGTCTTTTCAAGTGTTTAAAAATAGATTTTAAGTGTAAAAAAATGGTTTTTAATTATTTAAAAAGCCATTTCAAACAAGCTATAAGTTTGGATGGAGAAGTTCAGGAAACTAAGAGTGATAAAGGACCTGGAGTAACATATGACCGTGCATCTATTCTGCTGAGACCAGGAAATCTAAAATGGGGACCAGACAACACCTTTCTGTTTCGGAATCTCCTTGGTGTTGGTTATCAAAACCAACTTGTTCACTCAGTTCTTTATATGTCAATTTTTGTAACCCGAAGGAGTCTGGCTCTGAAGTTTGAGAAATAGATGATGAACTTCATCTGGGATAATAACAAAGGAAGACAATTGCCAGTTTGGTAAGGTGGGTGATGAAATTATTACCAGAATAAATGGAAGGACTGGGTATGGGAAATATTAGTAGACGTGAAGCACGTGTGTGTGGATTTATAAATGTGAAAACCAATAGTCCTTGGTGGAATATTACTTAACTAAAACCGAAAACCGTCCATAAGATGTTCTCAACAATAAGAGTAGGCAGTGAAAAACCCCTCTTGGGTGGAAGATTTAAGAGGATTAATTTTCAAATCTAATGCAGTTATTCCCTAATTTTGTTTTATTGTATGCTCCGAATGAAAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGTAAGAAATCATAAATTTTTTTTAGTCCACTAATTCTTTAGAACAAGAAATAGAATAGGAGCTGCTTCTTTCTTTCTTTGTCAGCCGACTTTAAAGGTGCTTTCGGCATACCATCACACATCACAAACAAAAGGCAAAAAAGGAATTAAGAATAAAGAAACGCATGCCACCATACGCACTTGGAGTCCATTAAGAGTCCATTATTTAGGCTGGATTGTCTTTTTTCCTCCTTGATATGTATTAGGTGACATCTTATGTGGGACCTTCAACTTCAAAACCTTTCTTCATAACCTATCTGTTACCATACCATATGATTTGATTTTGGACGTTACAGGTCGATGCCGTGGTATACCTGGTGGATGCCTATGATAAAGAGAGATTTGCAGAATCCAAAAAAGAACTTGACGCCCTCCTTTCAGATGAATCACTTGCAAACGTCCCGTTTCTCGTGTTGGGGAACAAGATTGACATACCCTACGCCGCCTCAGAGGATGAATTACGATACCACCTTGGCCTAACCAACTTCACCACTGGAAAGGGAAAGGTTAACCTAGCAGACACAAACGTCCGCCCGTTGGAGGTGTTCATGTGCAGCATCGTCCGGAAAATGGGGTATGGCGATGGCTTCAAGTGGCTTTCTCAATACATTAAGTAGGTGATAGTCTGCTAATGCATCACAGGTCATGATTGCCATGGCACACTCCATAGTAGCCAGAAGTTGCATTAGGTGCACATGTACTGTTGGTTCCATGTGGTCTGTAAAATTTGTGTATCAATAGTTTGTTTATTGGCCATTCCATGAGATTGGTATATGTATGCATTTCTTTTCTAGATTCAGCCAGCAGAATTTTCCTTTTTCTAGAAAATGTAAGACTTGAAAGCAATACAGCCTATGTGGTTTGTTTTGGGTATAAAATGTTTGGTTTTTGAATGTGAAGCCAGGAGGATCTCCACA

mRNA sequence

CCTCGAAATATACATTAAAAAAAAAAAAAAGGAGAAAATTCCATTCCATTCCATTGCATTCGATTTCCAACTCCAATTTCCAACCAGGTTTTGGAAGTTCCGTAGTTGTGAATTTTTCTTTCTCTAGCCTGCCCTTCTGCTGAGGATTCTCTTCTCAATCCGAGTGACAAACCCAAACAATCGGCGAGCTCGTTGTTGCTGGTGCCGACTCTGATCGATTCTCGGACCCCTTCTTTCACCGGTATCCTCGATTATGTTTCTTGTCGACTGGTTCTATGGCGTCTTGGCCTCCCTTGGTCTCTGGCAGAAGGAGGCCAAGATCCTCTTTCTTGGCCTCGATAATGCCGGAAAGACCACCTTGCTCCACATGTTGAAAGATGAGAACAATTCGATTACATGAGCTGGAAATCGTTCATAGCTTTATTCTGAGGTTAGTACAACATCAGCCAACACAGTATCCTACATCAGAGGAGTTGAGCATCGGAAAAATTAAGTTTAAGGCGTTTGATTTGGGAGGTCACCAGATTGCTCGTAGAGTTTGGAAGGACTACTATGCTAAGGCAAGCTAATTCTGCATACTCTTGTCTTTCTCTTATGTTAATGGGGTGTATGTTTTAAAGGGAGTTTAAAAAATATATTCATTTCAGATGATTATTCACATGAATTAGATGCAAATTTACAGGAACATTTGACTAAGCGGGTAAGGGCCATGGTTCCTGTGGTTTTGTAGCTTGATTCAGTATGGGACTTTTTTGGAAGGATATTCAACATTTAATTATGTTTTTGGCATTTTAGGGCACAATTTGAGAATTCTTCTCTGTGTTTATCAAGCAAGATAAAATTGTATATGGTAACTTTTTTCCTCGTGAAATTTGAAGATGAAATAAGAACCTTGTTTGATAATTATTTTTGTTTCAAGAAAAACTCGAATATCAAGAAAAGCACAGATTTAATTGATGTTCATTTTGATAAAATATATTTAATATTTCTGTTTCATTCTCAAGTTTTAGGATTTGTATGAACCTTGACATAGGAAACTTGGGAGCATATTCTTTTACATCCAAGATTTAAACTTGAGGTTCTTGACTGATACTTTTTCACCTAGGCATATCAATTCCAACTCTTTCCTACTGTTTTGTACTTTTGTGCTGAGATGCCTCTACTGCATTTTGTATCTTCTGATCTTCCTTCCATTTGTTCCCCAATACATATTACTTTTATGAAGTGATCGATTTTTATGTTCAAGACAAAAGAAGTGAAATAAGCTCTCTGGGAGAGCTTTATAAGAGCGTACTGCTGGACCATTTGGCTAGAGAGGAAGAGGAGGATTTCTTGGATGAGAATCTTCCCTATCACCGTTTTGTTTAGGTCTCCCCTTCTCCACTCCAATTGGAGAGGTCTTTTGTAATCCGCCACATGGGGTTTTCCTCATTTATAATTTCATACTATCAATGAAATTGTTTCTTACCTAAAAGAAATTTTGTGTTCAAGACTAGTCTAGTCCAGAGAAATCTGATCATAACAATCACGATGTAATAGCTAGACTAAGAATGACTAACCAATCCAGTAGAATTTAACAGAAATAATTTATTTTGTGTGTCATGTAGCTTGAGGGGTGGCAGATAAGTTAGAATTGAGGAAAGAAAAGGGAATCCCAATTTTGTATTATTTGGGAATGATTCAGCTGAAATGGCTTAGGACAGCTACTGGAGAAGTGATTGCAACCCTTGGAATAAAAATGTTTCAAGAAGACAAGATGGAAAGGGGGGTCAATATGATTTCAGAAACTTTTCTAACAAAAGAGGGTGGAGCTTAGAAATGTTTACTTCGTCAAATTAATGTGAGAGGAGAAGCTTGGTCATTTCAGCTGGACAAAATCACAATGGATGGATTGGAGTCCCTTTCTTTTATTGGGCGCTTCTTGTTTGGCGACACCCTTGTATATTCTTTCTTGCTTCTCTAAGAAAGCTTGGTTTTCTGGTTAGGAAAAAAAAAAGAGATAGAAGTCCTTTCTGAAATTATTGAACGACTTCCTCTCTAATGCTGAAGGTAAATGAAAGGATGAGATTGTAAATGGAGGTAATTAATCATATGTTGATGTGGTTGTAAAGGGAAGAGCAAAGATATTGTCTGGAGTCGGAGGTTTGATAGGGTGACTTATGAGAGAGCAATTATTCTTACCAATTTATGTTTCCATGTAATTGGTATTTGGTATGACATTTAAATTACTAATAAGGATTGTTTGCTAAACTGTAAATCCGTTCCAGCTAGACGAGACCTTGCTCTGGTGTACTAGTGTAGATGAAGCAAGAACTCTGTGCAGCAGTGGAGGCTTGTCTCAAGAGTGGGCAAGTTTTTATGTCAATTGCAAGTGGCGGGATAGATATAAACATAGTAGAGCCAAAGTCGTTCCATTCTTGGTGGCTGGATTAAACTGGGGGAGCTACCCATTGTCTTCCTGGAACAAGGCAATGATCGGAAATAAATGTGTGGGTTCAATATTTGAGAGGCTTGCAGTGAAGCAACAGAACTATTCTGGATTCATTCTTGCGGAAATTAAGGGAGTAGGTGCTAGTGGTTGTGTTCTTAACGTTCCATGGTACGGTGCTTTCCCCTAGGTCGCTTCTGACAAGGAGATTGCCGGAAGTTCAAAATGTTTTCCAAAGGAAGCTGCGGTCAGGTTATATGATCCCAATGAGTGCCCTTGTCCGACAGACTGATAATAGTAAAGTTGGATTGAGCTGGATAAAAGATTCAGGAAAATTGGAAATAATAGAAAAAGTTCAAAAAATGTTGGCCGTTAAAGGTAGAAGGCATGCGGATGATTCGGAGGGATCTTAACCTTGTGGACTAAAAAAGAAAGTCGTTTGGTGGTTTCATAAAGGGGCTTCTTTCTGTTACAAATAAAAATATAAAATGTGAGTTAGGGGATGGTAAATTGCTTGGATCTTGAACATTAATGGTCCACTATCATGTATTCTGGTGGTTGAGGCCAGAGGGGGACAATTTTAATATAGTACTTTGGTCAAACGAAAAATCAAACGGGAAAGAAAAACATGTTCTATGGATAAATATTGTGAAATTATTTAGTGTCGTCCTTGTCAAACTATTGATAATCTAGATTGATTGAAATTCCTCCTAACCATGGATATTTTTACACAGTCCAATGTGATTGCCATTACTTGACAAGTATTATAGTTTGTTTGGAATGTCTTTTCAAGTGTTTAAAAATAGATTTTAAGTGTAAAAAAATGGTTTTTAATTATTTAAAAAGCCATTTCAAACAAGCTATAAGTTTGGATGGAGAAGTTCAGGAAACTAAGAGTGATAAAGGACCTGGAGTAACATATGACCGTGCATCTATTCTGCTGAGACCAGGAAATCTAAAATGGGGACCAGACAACACCTTTCTGTTTCGGAATCTCCTTGGTGTTGGTTATCAAAACCAACTTGTTCACTCAGTTCTTTATATGTCAATTTTTGTAACCCGAAGGAGTCTGGCTCTGAAGTTTGAGAAATAGATGATGAACTTCATCTGGGATAATAACAAAGGAAGACAATTGCCAGTTTGGTAAGGTCGATGCCGTGGTATACCTGGTGGATGCCTATGATAAAGAGAGATTTGCAGAATCCAAAAAAGAACTTGACGCCCTCCTTTCAGATGAATCACTTGCAAACGTCCCGTTTCTCGTGTTGGGGAACAAGATTGACATACCCTACGCCGCCTCAGAGGATGAATTACGATACCACCTTGGCCTAACCAACTTCACCACTGGAAAGGGAAAGGTTAACCTAGCAGACACAAACGTCCGCCCGTTGGAGGTGTTCATGTGCAGCATCGTCCGGAAAATGGGGTATGGCGATGGCTTCAAGTGGCTTTCTCAATACATTAAGTAGGTGATAGTCTGCTAATGCATCACAGGTCATGATTGCCATGGCACACTCCATAGTAGCCAGAAGTTGCATTAGGTGCACATGTACTGTTGGTTCCATGTGGTCTGTAAAATTTGTGTATCAATAGTTTGTTTATTGGCCATTCCATGAGATTGGTATATGTATGCATTTCTTTTCTAGATTCAGCCAGCAGAATTTTCCTTTTTCTAGAAAATGTAAGACTTGAAAGCAATACAGCCTATGTGGTTTGTTTTGGGTATAAAATGTTTGGTTTTTGAATGTGAAGCCAGGAGGATCTCCACA

Coding sequence (CDS)

ATGAGAACAATTCGATTACATGAGCTGGAAATCGTTCATAGCTTTATTCTGAGGTTAGTACAACATCAGCCAACACAGTATCCTACATCAGAGGAGTTGAGCATCGGAAAAATTAAGTTTAAGGCGTTTGATTTGGGAGGTCACCAGATTGCTCGTAGAGTTTGGAAGGACTACTATGCTAAGGCAAGCTAA

Protein sequence

MRTIRLHELEIVHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS
Homology
[Close]
BLAST of ClCG09G005150 vs. NCBI nr
Match: RWW72074.1 (hypothetical protein BHE74_00020149 [Ensete ventricosum] >RZR99518.1 hypothetical protein BHM03_00029096 [Ensete ventricosum])

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 2  RTIRLHEL--EIVHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYY 61
          +T  LH L  E+V  F++ LVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYY
Sbjct: 33 KTTLLHMLKDEVVSRFLISLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYY 92

[Close]
BLAST of ClCG09G005150 vs. NCBI nr
Match: TQD91752.1 (hypothetical protein C1H46_022594 [Malus baccata])

HSP 1 Score: 99.8 bits (247), Expect = 9.2e-18
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 12  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
           V+SF  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 62  VNSFENRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 111

[Close]
BLAST of ClCG09G005150 vs. NCBI nr
Match: ERN03097.1 (hypothetical protein AMTR_s00003p00037810 [Amborella trichopoda])

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 14 SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 25 SWLQRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 72

[Close]
BLAST of ClCG09G005150 vs. NCBI nr
Match: KAF3654711.1 (GTP-binding protein SAR1B [Capsicum annuum])

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-17
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS 64
          RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK+S
Sbjct: 44 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKSS 89

[Close]
BLAST of ClCG09G005150 vs. NCBI nr
Match: XP_020521218.1 (GTP-binding protein SAR1A [Amborella trichopoda])

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-17
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 14 SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 6  SWLQRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 53

[Close]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match: P52885 (GTP-binding protein SAR1 OS=Nicotiana tabacum OX=4097 GN=SAR1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.0e-19
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match: O04834 (GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match: O04266 (GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match: Q01474 (GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match: O04267 (GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 3.9e-19
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match: A0A540LZR2 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_022594 PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 

Query: 12  VHSFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
           V+SF  RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 62  VNSFENRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 111

[Close]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match: A0A6G1BI54 (Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_003971 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.9e-18
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS 64
          RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK+S
Sbjct: 44 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKSS 89

[Close]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match: W1NZQ9 (Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00003p00037810 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.9e-18
Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 14 SFILRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          S++ RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 25 SWLQRLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 72

[Close]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match: A0A2P6RFR3 (Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside triphosphate hydrolase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0488041 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-17
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS 64
          RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK S
Sbjct: 44 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVS 89

[Close]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match: A0A5B6WUM9 (GTP-binding protein SAR1B OS=Gossypium australe OX=47621 GN=sar1 PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-17
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKAS 64
          RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK S
Sbjct: 44 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKES 89

[Close]
BLAST of ClCG09G005150 vs. TAIR 10
Match: AT1G56330.1 (secretion-associated RAS 1B )

HSP 1 Score: 94.7 bits (234), Expect = 2.7e-20
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. TAIR 10
Match: AT3G62560.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 94.7 bits (234), Expect = 2.7e-20
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. TAIR 10
Match: AT4G02080.1 (secretion-associated RAS super family 2 )

HSP 1 Score: 94.7 bits (234), Expect = 2.7e-20
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 87

[Close]
BLAST of ClCG09G005150 vs. TAIR 10
Match: AT1G09180.1 (secretion-associated RAS super family 1 )

HSP 1 Score: 89.4 bits (220), Expect = 1.2e-18
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 18 RLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAK 62
          RLVQHQPTQ+PTSEELSIGKI FKAFDLGGHQIARRVWKD YAK
Sbjct: 44 RLVQHQPTQHPTSEELSIGKINFKAFDLGGHQIARRVWKDCYAK 87

The following BLAST results are available for this feature:
BLAST of ClCG09G005150 vs. NCBI nr
Match NameE-valueIdentityDescription
RWW72074.11.1e-1880.65hypothetical protein BHE74_00020149 [Ensete ventricosum] >RZR99518.1 hypothetica... [more]
TQD91752.19.2e-1894.00hypothetical protein C1H46_022594 [Malus baccata][more]
ERN03097.12.0e-1793.75hypothetical protein AMTR_s00003p00037810 [Amborella trichopoda][more]
KAF3654711.12.0e-1797.83GTP-binding protein SAR1B [Capsicum annuum][more]
XP_020521218.12.0e-1793.75GTP-binding protein SAR1A [Amborella trichopoda][more]
BLAST of ClCG09G005150 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P528851.0e-19100.00GTP-binding protein SAR1 OS=Nicotiana tabacum OX=4097 GN=SAR1 PE=2 SV=1[more]
O048343.9e-1997.73GTP-binding protein SAR1A OS=Arabidopsis thaliana OX=3702 GN=SAR1A PE=2 SV=1[more]
O042663.9e-1997.73GTP-binding protein SAR1A OS=Brassica campestris OX=3711 GN=SAR1A PE=2 SV=1[more]
Q014743.9e-1997.73GTP-binding protein SAR1B OS=Arabidopsis thaliana OX=3702 GN=SAR1B PE=1 SV=1[more]
O042673.9e-1997.73GTP-binding protein SAR1B OS=Brassica campestris OX=3711 GN=SAR1B PE=2 SV=1[more]
BLAST of ClCG09G005150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A540LZR24.4e-1894.00Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_022594 PE=3 SV=1[more]
A0A6G1BI549.9e-1897.83Uncharacterized protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_003... [more]
W1NZQ99.9e-1893.75Uncharacterized protein OS=Amborella trichopoda OX=13333 GN=AMTR_s00003p00037810... [more]
A0A2P6RFR31.3e-1797.83Putative small GTPase superfamily, ARF/SAR type, P-loop containing nucleoside tr... [more]
A0A5B6WUM91.7e-1797.83GTP-binding protein SAR1B OS=Gossypium australe OX=47621 GN=sar1 PE=3 SV=1[more]
BLAST of ClCG09G005150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G56330.12.7e-2097.73secretion-associated RAS 1B [more]
AT3G62560.12.7e-2097.73Ras-related small GTP-binding family protein [more]
AT4G02080.12.7e-2097.73secretion-associated RAS super family 2 [more]
AT1G09180.11.2e-1893.18secretion-associated RAS super family 1 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 51..63
score: 36.43
coord: 24..48
score: 86.12
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 18..61
e-value: 2.1E-13
score: 50.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..63
e-value: 4.6E-12
score: 47.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 12..62
IPR006687Small GTPase superfamily, SAR1-typePANTHERPTHR45684RE74312Pcoord: 18..62
NoneNo IPR availablePANTHERPTHR45684:SF29GTP-BINDING PROTEIN SAR1-LIKEcoord: 18..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G005150.2ClCG09G005150.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070863 positive regulation of protein exit from endoplasmic reticulum
biological_process GO:0003400 regulation of COPII vesicle coating
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0030127 COPII vesicle coat
cellular_component GO:0070971 endoplasmic reticulum exit site
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding