ClCG09G004810 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G004810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	nitrogen regulatory protein P-II homolog
Location	CG_Chr09: 4254080 .. 4257402 (+)
RNA-Seq Expression	ClCG09G004810
Synteny	ClCG09G004810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAAGAGAAAAAAAAAAAGAAAAAAAAAAAAAAAAAACAGAAATTCCGAATCATAATTTATTAATTTTAAATGTTTTTTTTTTTTAAACTTGCGTCTTTTTGAAGCGGAAATTCCAACGTGAACTACGAGGCTACCGATCGGCTCGTCATCGTCATTCTGCTTCCTCTCTGATTCTCAAATCCCAGCTTCCATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTCTTCCTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCACCTCTTCTGCTTTTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAAGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCCAAGGCTCTCTCGGTAAGTATCACTCGCTTCACATTGCATCGCTCTTGAGCTTCTCAATTTGTAATATGCGGTTCTCTTGCTGTTTCTCTTTGTAGATTATGTTCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTCAGGTACGGACGTACTCCATATTGTTCTCTACTGTTACATTTGGAGTTCTTAAATGTTGATTCTGTTTTTTCTTTAGTTTGCATAGTGTGTATTGGATCTTTTGAAGTCTTTTGAGTAACCTTGCTGAGTTTGTTGCATCTGATGCGTATTTATCTATGTGCTATGTTGGTGTGTTTGGACGAGATAGGCCATGGAGAATCCAAAATGTTTCTTCGGTAAGAGCTAGTTAACCTTCAACATGGTCATTCGTAATTTCCATCTGGAATATGCAAAATCTCGTTTGGTTTTATTGTCAAATATGGTAAAATTAGGATACCTTGAGACTATGGGGGAAGAGTTATGAAAACCTAAGAAGCACAGACACTTTAGTTTGGCTTGCGTGCCTTTGTGACGGTGTCCGATACATGTCCGACACTTGGACACTCTGACACTTGTTGGACACGTATTGGCCACTTGTTAGTGTATTAGATGTGTTAGACACTAGTTGTACAAAGTCAAAATAGAACCAAAACTTATTAGGCATGCATCAAATACTAATTAGACCCATATATGACCAAAATAATAAAATTTGATAATGAAATACATCAAACTAATTTTAAACTTGTTGATTTTGGATTTCTTTCTAGTTTAAAAATGATATATATTTTTTAAAAAATGTATGTTTTAATAAACATGTCCTTTCTGTGTCCGTGTCCTAAATTTTTTAAAAAAGACGCGTCATCGTGTACATATCGTGTCGTATTTGTATTAGTGCTTCTTTGATGAAAACTTTGAATTTTTGGTATCAGAGGAAGTGTAGTTTAGGATCATAATATTGAGGCCATTCAAGGTTGGAAAAAGTCCCAGTTTCTATCGTACTTGCATTTCTAGATTGGTTGCACACTATCTTGTCAATACCATAGAATAAAAATGACTAATCTACTTGGTGCTCGTCCATAGCCAAAAAAAATCAAATAAAGATTGACCTTTAACCTATCGTGCCTGACAATGACATACATGTTTTATGTGTTTGAATGGTAGAAAATGAATGGAGATTATGAAGATTTTTGTTGTTTTAATATCCTATTTTACAAAGCGTTGGTATTAAATTGTTCTGTTGTTTCTTGGGGAAAAAATGAAGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGTAAGTTATCTTTCACAATTCTCTCCGTCTTAGTGCTTGGTGAGGGGAGTCTATTTGTACATGTTAGTCTGTTTCTAGACTCTCATGGTCCTTTTCCATTAGTCATTACTGATATCTGCTTATGATTCCATATCACTTTATACTCTTTTATTTACTGTTCAGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTAAAATATTGTTCAGCCCTCGTGAAAAGAAATTCAAATTTGTTGAACATATCCCTTAAGCAAACTGCTGCATTAGAATCCATGGGTACTTTGATTAAATTTAGGTATCCTTTTTATCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGTAAAACGTGTGTGTGTGTGAATATCTTTGAATAAGGCAGATTCTAAAATGTCCTTTGAAGAATTGGTTGTCTTATATGGTAATTATTAGTAACGAATTAAAATAATTGGTAAGTATTTGTCCGTTTAGAATGACTTTTTAAGTACACTTAAAAACACTTTTTGTGAACGTATGGGTATAAATGGGCCATGTCAATAGATGTTATGGTTAAGGAGCTGGCTTCGTCGTGAATGTTCTTCCTCCCGGAGATGTTGGTTTGGTTTCCATCATGTCAGAGTGTAATACTCCCAAGTATTTGAATCTCTAGATTCTTAAACTTAAAATTGTTACTTCAATGTACAGACATCACGTGAAATTGTTGTCTGAAGGGTAGTTTTAAATTGCCACTCCTGTATAGCTGACTATTAGTTGCTTTTAATACAAAAGCACATGAACTTTACTAGAGTTCATTATTTAAGTTATGCCATATGGTTGAAATCTAAAGCCCGTATTCAAATGCACACACATCGAAGAAATGCAAATCTCGGAATTCTATTTTCTTTATTTAGTTCAGACCTTTTATGCTCCTATCAAACTTCTAACACACTTTTCAATTTCACACAGTGATACCCATCTCAGACGTGATTAGAATTCGTACAGGTATCTTGTTAGCTTTGAGCAACTATCAAATTTTCAAGTTGCCTACTATATGAAAGTTAAAAACATTAAGATTATTTCATTTCACATTGGTATATGACATGCCTTATATGATTCTTAATTTGCAGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAAGTAGGGCAGTAAGAAGGCTAAAATGTTTCGAGTTTGGAACTTTTGTTCCATGGTCTTGCCGCTACCTTCCTCAGTTTGGTCCTGTGGAGATGAGAAATAAAAGAAATTGTAAGTTAGATAAGTTTCATTTTCTTGAAAACATCGGACTTGTAAATATGTAACTTCGTCATGCTGTCATAAATATGAACCACATTAGGCAATAATCAACGCGTAAGCTACTGTACCTTTTCCTAATTTACCTCTGATTTGATGGTGAATCCGAAGAGATGTGTAGTTGTCTTGTTCTTTACCATATTTACATTGACTTTTGTTTAAAATTTTGCATATGCGGTTGTATTTGAGGTAAAAT

mRNA sequence

AAGGAAAGAGAAAAAAAAAAAGAAAAAAAAAAAAAAAAAACAGAAATTCCGAATCATAATTTATTAATTTTAAATGTTTTTTTTTTTTAAACTTGCGTCTTTTTGAAGCGGAAATTCCAACGTGAACTACGAGGCTACCGATCGGCTCGTCATCGTCATTCTGCTTCCTCTCTGATTCTCAAATCCCAGCTTCCATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTCTTCCTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCACCTCTTCTGCTTTTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAAGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCCAAGGCTCTCTCGATTATGTTCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTCAGTCTTTTGAGTAACCTTGCTGAGTTTGTTGCATCTGATGCGTATTTATCTATGTGCTATGTTGGTGTGTTTGGACGAGATAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGTAAGTTATCTTTCACAATTCTCTCCGTCTTAGTGCTTGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAAGTAGGGCAGTAAGAAGGCTAAAATGTTTCGAGTTTGGAACTTTTGTTCCATGGTCTTGCCGCTACCTTCCTCAGTTTGGTCCTGTGGAGATGAGAAATAAAAGAAATTGTAAGTTAGATAAGTTTCATTTTCTTGAAAACATCGGACTTGTAAATATGTAACTTCGTCATGCTGTCATAAATATGAACCACATTAGGCAATAATCAACGCGTAAGCTACTGTACCTTTTCCTAATTTACCTCTGATTTGATGGTGAATCCGAAGAGATGTGTAGTTGTCTTGTTCTTTACCATATTTACATTGACTTTTGTTTAAAATTTTGCATATGCGGTTGTATTTGAGGTAAAAT

Coding sequence (CDS)

ATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTCTTCCTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCACCTCTTCTGCTTTTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAAGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCCAAGGCTCTCTCGATTATGTTCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTCAGTCTTTTGAGTAACCTTGCTGAGTTTGTTGCATCTGATGCGTATTTATCTATGTGCTATGTTGGTGTGTTTGGACGAGATAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGTAAGTTATCTTTCACAATTCTCTCCGTCTTAGTGCTTGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAAGTAGGGCAGTAA

Protein sequence

MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVKAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFGERGERAERMTGGRYDMSVNQVGQ

Homology

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BLAST of ClCG09G004810 vs. NCBI nr
Match: XP_038899657.1 (nitrogen regulatory protein P-II homolog [Benincasa hispida])

HSP 1 Score: 300.8 bits (769), Expect = 9.9e-78
Identity = 175/241 (72.61%), Postives = 181/241 (75.10%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAAITTNPTALLL   +SPLP FHHFTSS+ IT + TA+RFS F+LANKPSNRQILPLVK
Sbjct: 1   MAAITTNPTALLL-HFYSPLPQFHHFTSSSSITSSSTAVRFSHFHLANKPSNRQILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
           AAQGSLDYVPDSKFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  AAQGSLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVSDVKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSDVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 230
           KDQVEAVI+KIIEEARTGEIGDGKIF            GERGERAERMTGGRYDMSVNQV
Sbjct: 181 KDQVEAVINKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRYDMSVNQV 200

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BLAST of ClCG09G004810 vs. NCBI nr
Match: XP_023548897.1 (nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.6 bits (693), Expect = 6.4e-69
Identity = 166/240 (69.17%), Postives = 174/240 (72.50%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAA  TNPTALLL P HSPLP   HF SS+ ITPNF A+RFSQFNLA KPSNR+ILPLVK
Sbjct: 1   MAATATNPTALLL-PFHSPLPKLPHFASSS-ITPNF-AVRFSQFNLAYKPSNRRILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
            AQ SLDYVPDSKFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  -AQASLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVS+VKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSEVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 229
           K+QVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DM+V++V
Sbjct: 181 KEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV 196

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BLAST of ClCG09G004810 vs. NCBI nr
Match: KAG6575740.1 (Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014290.1 Nitrogen regulatory protein P-II-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 271.2 bits (692), Expect = 8.4e-69
Identity = 165/240 (68.75%), Postives = 173/240 (72.08%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAA  TNPTALLL P  SPLP   HF SS+ ITPNF A+RFSQFNLA KPSNR+ILPLVK
Sbjct: 1   MAATATNPTALLL-PFPSPLPKLPHFASSSSITPNF-AVRFSQFNLAYKPSNRRILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
            AQ SLDYVPDSKFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  -AQASLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVS+VKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSEVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 229
           K+QVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DM+V++V
Sbjct: 181 KEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV 197

[Close]

BLAST of ClCG09G004810 vs. NCBI nr
Match: XP_022954086.1 (nitrogen regulatory protein P-II homolog [Cucurbita moschata])

HSP 1 Score: 268.9 bits (686), Expect = 4.2e-68
Identity = 164/240 (68.33%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAA  T PTALLL P  SPLP   HF SS+ ITPNF A+RFSQFNLA KPSNR+ILPLVK
Sbjct: 1   MAATATKPTALLL-PFPSPLPKLPHFASSSSITPNF-AVRFSQFNLAYKPSNRRILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
            AQ SLDYVPDSKFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  -AQASLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVS+VKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSEVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 229
           K+QVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DM+V++V
Sbjct: 181 KEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV 197

[Close]

BLAST of ClCG09G004810 vs. NCBI nr
Match: XP_011659409.1 (nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.1 hypothetical protein Csa_015915 [Cucumis sativus])

HSP 1 Score: 267.7 bits (683), Expect = 9.3e-68
Identity = 162/239 (67.78%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNRQILPLV 60
           +AA TTN TALLL     P P FHHFTS +FITP FT +  S FNLAN  PSNRQILPLV
Sbjct: 3   VAATTTNLTALLL-----PRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLV 62

Query: 61  KAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSA 120
           KA QGSLDYVPDSKFYKVEAIL                           RPWRIQNVSSA
Sbjct: 63  KATQGSLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSA 122

Query: 121 LLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVV 180
           LLKMGIRGVTVSDVKGFGSQGGS ERHG             GSEFSEDNFV KVKMEIVV
Sbjct: 123 LLKMGIRGVTVSDVKGFGSQGGSKERHG-------------GSEFSEDNFVTKVKMEIVV 182

Query: 181 VKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVN 227
           VKDQVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DMS N
Sbjct: 183 VKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRSDMSDN 196

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BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot
Match: Q9ZST4 (Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 120/232 (51.72%), Postives = 139/232 (59.91%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNR-QILPL 60
           MAA  T P ++     +S   +   F+    I   F   R S  +L  K PSN  ++LP+
Sbjct: 1   MAASMTKPISITSLGFYSDRKNI-AFSDCISICSGFRHSRPSCLDLVTKSPSNNSRVLPV 60

Query: 61  VKAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSS 120
           V +AQ S DY+PDSKFYKVEAI+                           RPWRIQ VSS
Sbjct: 61  V-SAQISSDYIPDSKFYKVEAIV---------------------------RPWRIQQVSS 120

Query: 121 ALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIV 180
           ALLK+GIRGVTVSDV+GFG+QGGSTERHG             GSEFSED FVAKVKMEIV
Sbjct: 121 ALLKIGIRGVTVSDVRGFGAQGGSTERHG-------------GSEFSEDKFVAKVKMEIV 180

Query: 181 VVKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTG 219
           V KDQVE+VI+ IIE ARTGEIGDGKIF            GERGE+AE+MTG
Sbjct: 181 VKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKAEKMTG 190

[Close]

BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot
Match: Q6AUR2 (Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GLB PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-37
Identity = 99/189 (52.38%), Postives = 112/189 (59.26%), Query Frame = 0


Query: 48  NKPSNRQILPLVKAAQ--GSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVF 107
           N    R++ P    AQ   +  Y P+S+FYKVEAIL                        
Sbjct: 55  NHAPPRRLPPTAARAQSAAAAGYQPESEFYKVEAIL------------------------ 114

Query: 108 GRDRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFS 167
              RPWR+  VSS LL+MGIRGVTVSDV+GFG+QGGSTERH              GSEF+
Sbjct: 115 ---RPWRVPYVSSGLLQMGIRGVTVSDVRGFGAQGGSTERHE-------------GSEFA 174

Query: 168 EDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERA 223
           ED F+ KVKMEIVV KDQVEAV+DKIIE+ARTGEIGDGKIF            GERGERA
Sbjct: 175 EDTFIDKVKMEIVVSKDQVEAVVDKIIEKARTGEIGDGKIFLIPVSDVIRIRTGERGERA 203

[Close]

BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot
Match: Q47894 (Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 109 RPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDN 168
           RP+++  V  AL+  GI G+TVS+V+GFG Q G TER+              GSE++ + 
Sbjct: 9   RPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERY-------------RGSEYTVE- 68

Query: 169 FVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFGERGERAERMTGG 220
           F+ K+K+EIVV  +QV+ V+DKII  ARTGEIGDGKIF    E+  R+  G
Sbjct: 69  FLQKLKVEIVVEDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVVRIRTG 105

[Close]

BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot
Match: O30794 (Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=glnB PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.9e-15
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 109 RPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDN 168
           RP+++  V  AL+  GI G+TVS+V+GFG Q G TER+              GSE++ + 
Sbjct: 9   RPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERY-------------RGSEYTVE- 68

Query: 169 FVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFGERGERAERMTGG 220
           F+ K+K+EIVV  +QV+ V+DKII  ARTGEIGDGKIF    E+  R+  G
Sbjct: 69  FLQKLKVEIVVDDNQVDMVVDKIIAAARTGEIGDGKIFISPVEQVIRIRTG 105

[Close]

BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot
Match: P0A3F4 (Nitrogen regulatory protein P-II OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=glnB PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.3e-15
Identity = 51/111 (45.95%), Postives = 70/111 (63.06%), Query Frame = 0


Query: 109 RPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDN 168
           RP+++  V  AL+  GI G+TVS+V+GFG Q G TER+              GSE++ + 
Sbjct: 9   RPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERY-------------RGSEYTVE- 68

Query: 169 FVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFGERGERAERMTGG 220
           F+ K+K+EIVV   QV+ VIDKI+  ARTGEIGDGKIF    ++  R+  G
Sbjct: 69  FLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTG 105

[Close]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL
Match: A0A6J1GPW8 (nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111456457 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 2.0e-68
Identity = 164/240 (68.33%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAA  T PTALLL P  SPLP   HF SS+ ITPNF A+RFSQFNLA KPSNR+ILPLVK
Sbjct: 1   MAATATKPTALLL-PFPSPLPKLPHFASSSSITPNF-AVRFSQFNLAYKPSNRRILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
            AQ SLDYVPDSKFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  -AQASLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVS+VKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSEVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 229
           K+QVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DM+V++V
Sbjct: 181 KEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV 197

[Close]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL
Match: A0A0A0K850 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.5e-68
Identity = 162/239 (67.78%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNRQILPLV 60
           +AA TTN TALLL     P P FHHFTS +FITP FT +  S FNLAN  PSNRQILPLV
Sbjct: 3   VAATTTNLTALLL-----PRPQFHHFTSFSFITPYFTTVGLSHFNLANNHPSNRQILPLV 62

Query: 61  KAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSA 120
           KA QGSLDYVPDSKFYKVEAIL                           RPWRIQNVSSA
Sbjct: 63  KATQGSLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSA 122

Query: 121 LLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVV 180
           LLKMGIRGVTVSDVKGFGSQGGS ERHG             GSEFSEDNFV KVKMEIVV
Sbjct: 123 LLKMGIRGVTVSDVKGFGSQGGSKERHG-------------GSEFSEDNFVTKVKMEIVV 182

Query: 181 VKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVN 227
           VKDQVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DMS N
Sbjct: 183 VKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRSDMSDN 196

[Close]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL
Match: A0A5A7UU45 (Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00060 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.0e-67
Identity = 162/239 (67.78%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNRQILPLV 60
           +AA TTN T LLLP    P P FH FTS +FITP FT +  S FNLAN  PSNRQILPLV
Sbjct: 3   VAATTTNLTVLLLP----PRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLV 62

Query: 61  KAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSA 120
           KA QGSLDYVPDSKFYKVEAIL                           RPWRIQNVSSA
Sbjct: 63  KATQGSLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSA 122

Query: 121 LLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVV 180
           LLKMGIRGVTVSDVKGFGSQGGS ERHG             GSEFSEDNFVAKVKMEIVV
Sbjct: 123 LLKMGIRGVTVSDVKGFGSQGGSKERHG-------------GSEFSEDNFVAKVKMEIVV 182

Query: 181 VKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVN 227
           VKDQVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DMS N
Sbjct: 183 VKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRSDMSDN 197

[Close]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL
Match: A0A1S3CEB3 (nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.0e-67
Identity = 162/239 (67.78%), Postives = 165/239 (69.04%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNRQILPLV 60
           +AA TTN T LLLP    P P FH FTS +FITP FT +  S FNLAN  PSNRQILPLV
Sbjct: 3   VAATTTNLTVLLLP----PRPQFHPFTSFSFITPYFTPVGLSHFNLANNHPSNRQILPLV 62

Query: 61  KAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSA 120
           KA QGSLDYVPDSKFYKVEAIL                           RPWRIQNVSSA
Sbjct: 63  KATQGSLDYVPDSKFYKVEAIL---------------------------RPWRIQNVSSA 122

Query: 121 LLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVV 180
           LLKMGIRGVTVSDVKGFGSQGGS ERHG             GSEFSEDNFVAKVKMEIVV
Sbjct: 123 LLKMGIRGVTVSDVKGFGSQGGSKERHG-------------GSEFSEDNFVAKVKMEIVV 182

Query: 181 VKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVN 227
           VKDQVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DMS N
Sbjct: 183 VKDQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRIRTGERGERAERMTGGRSDMSDN 197

[Close]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL
Match: A0A6J1JMD1 (nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC111488188 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 6.5e-67
Identity = 163/240 (67.92%), Postives = 171/240 (71.25%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANKPSNRQILPLVK 60
           MAA TT PTALLL P  SPLP   HF SS+F TPNF A+RFSQFNL  KPSNR+ILPLVK
Sbjct: 1   MAATTTKPTALLL-PFPSPLPKLPHFASSSF-TPNF-AVRFSQFNLVYKPSNRRILPLVK 60

Query: 61  AAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSSAL 120
            AQ SLDYVPD KFYKVEAIL                           RPWRIQNVSSAL
Sbjct: 61  -AQASLDYVPDFKFYKVEAIL---------------------------RPWRIQNVSSAL 120

Query: 121 LKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIVVV 180
           LKMGIRGVTVS+VKGFGSQGGSTERHG             GSEFSEDNFVAKVKMEIVVV
Sbjct: 121 LKMGIRGVTVSEVKGFGSQGGSTERHG-------------GSEFSEDNFVAKVKMEIVVV 180

Query: 181 KDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTGGRYDMSVNQV 229
           K+QVEAVIDKIIEEARTGEIGDGKIF            GERGERAERMTGGR DM+V++V
Sbjct: 181 KEQVEAVIDKIIEEARTGEIGDGKIFVIPISDVIRVRTGERGERAERMTGGRSDMAVDRV 196

[Close]

BLAST of ClCG09G004810 vs. TAIR 10
Match: AT4G01900.1 (GLNB1 homolog )

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-43
Identity = 120/232 (51.72%), Postives = 139/232 (59.91%), Query Frame = 0


Query: 1   MAAITTNPTALLLPPLHSPLPHFHHFTSSAFITPNFTALRFSQFNLANK-PSNR-QILPL 60
           MAA  T P ++     +S   +   F+    I   F   R S  +L  K PSN  ++LP+
Sbjct: 1   MAASMTKPISITSLGFYSDRKNI-AFSDCISICSGFRHSRPSCLDLVTKSPSNNSRVLPV 60

Query: 61  VKAAQGSLDYVPDSKFYKVEAILSLLSNLAEFVASDAYLSMCYVGVFGRDRPWRIQNVSS 120
           V +AQ S DY+PDSKFYKVEAI+                           RPWRIQ VSS
Sbjct: 61  V-SAQISSDYIPDSKFYKVEAIV---------------------------RPWRIQQVSS 120

Query: 121 ALLKMGIRGVTVSDVKGFGSQGGSTERHGGKLSFTILSVLVLGSEFSEDNFVAKVKMEIV 180
           ALLK+GIRGVTVSDV+GFG+QGGSTERHG             GSEFSED FVAKVKMEIV
Sbjct: 121 ALLKIGIRGVTVSDVRGFGAQGGSTERHG-------------GSEFSEDKFVAKVKMEIV 180

Query: 181 VVKDQVEAVIDKIIEEARTGEIGDGKIF------------GERGERAERMTG 219
           V KDQVE+VI+ IIE ARTGEIGDGKIF            GERGE+AE+MTG
Sbjct: 181 VKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKAEKMTG 190

The following BLAST results are available for this feature:

BLAST of ClCG09G004810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899657.1	9.9e-78	72.61	nitrogen regulatory protein P-II homolog [Benincasa hispida]	[more]
XP_023548897.1	6.4e-69	69.17	nitrogen regulatory protein P-II homolog [Cucurbita pepo subsp. pepo]	[more]
KAG6575740.1	8.4e-69	68.75	Nitrogen regulatory protein P-II-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_022954086.1	4.2e-68	68.33	nitrogen regulatory protein P-II homolog [Cucurbita moschata]	[more]
XP_011659409.1	9.3e-68	67.78	nitrogen regulatory protein P-II homolog [Cucumis sativus] >KGN45044.1 hypotheti...	[more]

BLAST of ClCG09G004810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZST4	3.1e-42	51.72	Nitrogen regulatory protein P-II homolog OS=Arabidopsis thaliana OX=3702 GN=GLB1...	[more]
Q6AUR2	2.3e-37	52.38	Nitrogen regulatory protein P-II homolog OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q47894	1.1e-15	46.85	Nitrogen regulatory protein P-II OS=Microchaete diplosiphon OX=1197 GN=glnB PE=3...	[more]
O30794	1.9e-15	46.85	Nitrogen regulatory protein P-II OS=Nostoc punctiforme (strain ATCC 29133 / PCC ...	[more]
P0A3F4	3.3e-15	45.95	Nitrogen regulatory protein P-II OS=Synechococcus elongatus (strain PCC 7942 / F...	[more]

BLAST of ClCG09G004810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPW8	2.0e-68	68.33	nitrogen regulatory protein P-II homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0K850	4.5e-68	67.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414410 PE=3 SV=1	[more]
A0A5A7UU45	1.0e-67	67.78	Nitrogen regulatory protein P-II-like protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3CEB3	1.0e-67	67.78	nitrogen regulatory protein P-II homolog OS=Cucumis melo OX=3656 GN=LOC103500000...	[more]
A0A6J1JMD1	6.5e-67	67.92	nitrogen regulatory protein P-II homolog OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of ClCG09G004810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01900.1	2.2e-43	51.72	GLNB1 homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002187	Nitrogen regulatory protein PII	PRINTS	PR00340	PIIGLNB	coord: 123..141 score: 50.77 coord: 197..217 score: 49.58 coord: 166..189 score: 34.72
IPR002187	Nitrogen regulatory protein PII	SMART	SM00938	P_II_3	coord: 109..218 e-value: 3.6E-21 score: 86.3
IPR002187	Nitrogen regulatory protein PII	PFAM	PF00543	P-II	coord: 109..206 e-value: 4.2E-23 score: 81.9
IPR002187	Nitrogen regulatory protein PII	PANTHER	PTHR30115	NITROGEN REGULATORY PROTEIN P-II	coord: 45..224
IPR002187	Nitrogen regulatory protein PII	PROSITE	PS51343	PII_GLNB_DOM	coord: 101..226 score: 23.380974
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 109..224 e-value: 3.9E-33 score: 116.4
None	No IPR available	PANTHER	PTHR30115:SF11	NITROGEN REGULATORY PROTEIN P-II HOMOLOG	coord: 45..224
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 109..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G004810.2	ClCG09G004810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006808	regulation of nitrogen utilization
cellular_component	GO:0005829	cytosol
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030234	enzyme regulator activity