ClCG09G003700 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGATTATGGAGATTAGTCATTTGGAAGGAATGCTAGCGACTGCTGCCGTGTTCGTCCTTGTGCAGATTCTAGTCTATCTAATTCTCTCTAAATCTTCCCAAGTCTTCTCTAAGAACACGAACAGGTCTCTCAGTTTTCGACGCGTTCAATCTCTGAGTATTTGTCGGATTATTGAAGCTCTCTCCGATTTTCCCTCCGATGGCGAGGCATCTCCTTCTCCAAAAGAATGTCATGGAGAATGTGAAACGGTGTTCGAAGAAGGCAGTTTGTAA ATGATGATTATGGAGATTAGTCATTTGGAAGGAATGCTAGCGACTGCTGCCGTGTTCGTCCTTGTGCAGATTCTAGTCTATCTAATTCTCTCTAAATCTTCCCAAGTCTTCTCTAAGAACACGAACAGGTCTCTCAGTTTTCGACGCGTTCAATCTCTGAGTATTTGTCGGATTATTGAAGCTCTCTCCGATTTTCCCTCCGATGGCGAGGCATCTCCTTCTCCAAAAGAATGTCATGGAGAATGTGAAACGGTGTTCGAAGAAGGCAGTTTGTAA ATGATGATTATGGAGATTAGTCATTTGGAAGGAATGCTAGCGACTGCTGCCGTGTTCGTCCTTGTGCAGATTCTAGTCTATCTAATTCTCTCTAAATCTTCCCAAGTCTTCTCTAAGAACACGAACAGGTCTCTCAGTTTTCGACGCGTTCAATCTCTGAGTATTTGTCGGATTATTGAAGCTCTCTCCGATTTTCCCTCCGATGGCGAGGCATCTCCTTCTCCAAAAGAATGTCATGGAGAATGTGAAACGGTGTTCGAAGAAGGCAGTTTGTAA MMIMEISHLEGMLATAAVFVLVQILVYLILSKSSQVFSKNTNRSLSFRRVQSLSICRIIEALSDFPSDGEASPSPKECHGECETVFEEGSL Homology
BLAST of ClCG09G003700 vs. NCBI nr
Match: XP_022954080.1 (uncharacterized protein LOC111456452 [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 4.4e-21 Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of ClCG09G003700 vs. NCBI nr
Match: KAG6575656.1 (hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014206.1 hypothetical protein SDJN02_24381, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-21 Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of ClCG09G003700 vs. NCBI nr
Match: XP_023548863.1 (uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 110.2 bits (274), Expect = 9.8e-21 Identity = 63/89 (70.79%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of ClCG09G003700 vs. NCBI nr
Match: XP_022147203.1 (uncharacterized protein LOC111016209 [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 8.3e-20 Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of ClCG09G003700 vs. NCBI nr
Match: XP_038898457.1 (uncharacterized protein LOC120086089 [Benincasa hispida]) HSP 1 Score: 102.4 bits (254), Expect = 2.0e-18 Identity = 62/90 (68.89%), Postives = 71/90 (78.89%), Query Frame = 0
BLAST of ClCG09G003700 vs. ExPASy TrEMBL
Match: A0A6J1GRF7 (uncharacterized protein LOC111456452 OS=Cucurbita moschata OX=3662 GN=LOC111456452 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21 Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 0
BLAST of ClCG09G003700 vs. ExPASy TrEMBL
Match: A0A6J1D0M4 (uncharacterized protein LOC111016209 OS=Momordica charantia OX=3673 GN=LOC111016209 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.0e-20 Identity = 65/95 (68.42%), Postives = 71/95 (74.74%), Query Frame = 0
BLAST of ClCG09G003700 vs. ExPASy TrEMBL
Match: A0A6J1JXQ0 (uncharacterized protein LOC111488440 OS=Cucurbita maxima OX=3661 GN=LOC111488440 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.2e-17 Identity = 58/82 (70.73%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of ClCG09G003700 vs. ExPASy TrEMBL
Match: A0A371I8K6 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_03975 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 9.0e-12 Identity = 44/71 (61.97%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of ClCG09G003700 vs. ExPASy TrEMBL
Match: V7BSW8 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G042200g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.5e-11 Identity = 44/70 (62.86%), Postives = 51/70 (72.86%), Query Frame = 0
BLAST of ClCG09G003700 vs. TAIR 10
Match: AT1G05575.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G31945.1); Has 63 Blast hits to 63 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 3.4e-11 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of ClCG09G003700 vs. TAIR 10
Match: AT2G31945.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G05575.1); Has 61 Blast hits to 61 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 3.5e-08 Identity = 34/65 (52.31%), Postives = 47/65 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|