ClCG09G001950 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G001950
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 1830888 .. 1834476 (+)
RNA-Seq ExpressionClCG09G001950
SyntenyClCG09G001950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTTCTTCTTCTTCTTCAATGGCGCGCCGTTGGACTTCTCACAGCGCTCAAATTCTCCAGGTACGAAACCTTCTTGTTCGTCACTATATTCCCTGGCTTGTTCCCTTGTTTCAGATCTGAATCCCCGTAGAAATCATCCGAATTCCCCAACGATTCCTTCTTTGCCTCCGCCTCACTTTGATCCTGTCCCCACCCCATGAAATCCAACAGCGTCATTGAAGCCGGCGTTTCTGGCCCGTTGTTGTTCAACTCTTCTGACTTTTCCGCTGGAGTTTCGCACGTCGGTTTCCTCTTCGTTGCTATTTGTGACGGATTCTGAGTTAACCCATCCGCGTGGAGCACGTCTTCAATTCGAGACATCACTGTGAACGCTAAGCTTTCCAGTATTCTCGAGTAGCTCTCTAGAACGGCGTGCCCCACGTCCTGCAGTTCACACACCAGTAAGTTGTGATTTCCTTCTTCAAAGATTTCAAACAAGTTTGTTTCTGGTAATGAAACTAGGAATTTACAACATGTTTGTTTTGTATGCTATAATGTAGATAGACATGTTGTTTTAGGCATTGTTTTATGATCTCACGCTGCCAAACAGATGGACACGGGATTGTTATTACATATATCATGTCACTTAGAAGATGTTGGGCAGAATTTTAATAAGCATCGGTTAATGTAGCCTAAAGTTGAGAAGCATTGATTTTAGTTTCTGTAAAATGGGCTTGTGTTGTAAAAGAATAGGAATAGGTTATAGAAATTTAAGTTTGTAGAATGTGGTTTATGAGATGAGTTAGTATAATACAGGTTCATGCAGGTTAATATAATACAGGTTCACGTAATTTGAGATGAACAAACATACGCATACCAAATGTAGATTTCTCTTTTGAACAGCCCCGTGTTAGACACTCGACAAGAAGCTTGGCCTTTCTTTTTTTATTTTATCATTCTATTCACCTTTAAGCTTTAATTTAAATGTTAATGATTTTAGATGAGATTATAGACAAGGAAGGGGCGTTCTTTTACCCGGTTGAACTGAATTTTGCTGATGTCTAGTGAAGATTGTGGGATTCCAGGGAATCGGTGCTTAAGTATTAGCAATATGGTCTCTGCTCTCTCTTCAAATAGTTCTCTCTTTTCCAAACTCACTGCTGAACCCCAAGCAGATTTTCCATCTTTCTGGTTCATCTTCCTCCTCCAAATCACTATGGAGGCTTCAATTCTGTCTTTGAGATCTAGGATTTTATGCTCTGATGTTAGGTCCATGCTGGAGAGAAACTGATCTGGATCAAAGAACTCAACTGTTATACTTTTGTAGATGGAATCCCCTAGGCTTGCCCTTCCATTCTGTAAAACCATGAACAAAACTTAATTTTGATCGAAGATTGCCCTTCCATTCGAAAATGTTACGAACATAATTGGTTTCGCTTACTTTAGGGAGAGATTCAATGTAGTCTTCAGGGATTTCCATTTCTGATATGATTTGAGCATTTATAGCCATGGCTGCTTTGAGTACTTGGTTGACACAATCCTTCTGGTACTGCAGAAACTTCCTCGACATGTCTGACAAGCCATTTGGAGGAACTTTGGCTGTAGGTAGCCACCATTTATCATCTTTCCTCTTGTTATTTCCTTTCTCCGAGTCATCAGCATCTCTCGATACATAGTAGAACTCATTTTGGTCTTTAAAATTATCCAGACAATCCTGTGTTTTGTCATGGCAAACCCAATATCACATAGGATTAGTTCGACTGAAGCAGAAAAAACAAGAAAAAATACAGTAAATTTAAGCCATAGTTCTTACAATTAACATGGCATCAAGCTTCCTCAAAGCTGGGATATTCAAGTGCAAATCATTTCGTTGCCGGGTCACCATTATCTATAACAACAGTAAACCTTACTTGTAAGATAGAAAAAGAAAGGTTGGAACATTAGAGTTAAGGTCCGGGTATTAATGAATTGAATGGATGAATTTCTCCTAATCTAACCTTATGAGCATCATATCAGTGGATTTTAATTATAGAGTTGAAATTGGATTGTTACCTCCATATTCGTTCCGTCCTTGGATTTCTGTTGTGCAGGAACAAACTCTACAATGTAATCTGTAACGGATAAGAGCAAATCGATTTCTTTTCTCCATCTTGCTTTTCTTTCTACTGACATTGGCTCAAGACGCCATTGTTCTCCAAAGACAGACGCTGCAAAATTGACAGACAAAATTTAGATCCTAACAGAAATTTCTGTACTGCTTCAGCCGTATTCTGATGCCGAAAACCGAGGGAAAAATTTCCCCAAGGCTACCATGTAAGAAATTCTAGGCACGTACCAGCAAGGTTTGTGATTGCATTAGACAATGCCAAGGCTGAGGAAACTCCCTTCCCTCCCCCGGACATGTCTTCCCCCAAGAGCAACTTTGCAAACCTCTCTTTCATCTGTTCCATTTCTGAATTATAACCCAATTGGAAGAGGAAATTAATTGCAGAATCAAATAAAAAGCCTTCCACCTAGAATAAATAATGACCTCATTTTGATACCTAATCTTCAACTATTTGAGTTCATTTTGGTCCTTAAACTTTATGTTTGTTTTGTTTCGGCCTTCAACCTTTGAAATGTCTATTTTTGTCCCAAGGCTTGAAAAAATAACTATTTTTGTCTTTAACAAGAATATGGTGCTGAAGTTGATTAAGGTAAAACTTGGTTAAGTATATATTAGATTGTGAAATAGTTGCAAGGATCAGAATTATTGTTTTTTGAAAGGCAAGTAACTAAAATAGATGTTTTGAAGGTCTCAGGACTAAAGAAACACGAACCCAAGGCCATCTTGTCTTTGACTTCCTTTTCAGTGGCAGGATCATCATCCTTGCTGCTCAATTTCGGCTTCGGAGCTCTTTCAGAGCAATTTGATGGTGCCAATGGTAGCCCAGCTTGGTGTTTCTCAGCAGAGTTGTGAACTGGTGTCGATCCCTGGCTTCTGGATGTCGACAAATCATCTTTGATGACAGATTCCAACATGCTGGCACTCTCCACACTCAAGCTCTTGGCATGTCTGCCTGCATTCTCATGCGTTCCTCTGAAATGAAAGAATCTGGACCTGAAACCTTCGTGCTCCTGCTCCATAGCACGAACCATTCTCAGTTTTTTGATGAAACGTTTGACTGAAAACAAAAGGGACAACAAACCGGCAACTGGGTGATGAATGCCTTGTGGGTTTTAGATAGCATAGAGAGAAGATGAAGAGAATTGAGAATAAGGAGGAAGAGAAGCAGGATGTTGAGAAGAAGAAAAAAAAGTGGATTGGGATATTTATGTTTTGCTTCTCTTTACCTCCTTTGAACTGAGGAATTATGGAAAGTTTTGTTTTATTCACTCTCTCTCTAGTTTTATCTTTTTGGTTATTGGATTGGTTTCCCTTTTCTCCTTCTATTTTTGAGAAGGAGATTGATGCAATGTGAGGTGCATCTTAAGAGAAGGTTGGTTAGAGAAAGAAAGAAAGAAAGAAATGTTTTGAACTTACTTTTCGTTTTTTGGTGGAAGAATTTGCTTTGTTATTTTTTTTTCACAGTACTTCCAATCGGATGGTTCAGCTCAAACTTTGCTAA

mRNA sequence

CTTCTTCTTCTTCTTCTTCAATGGCGCGCCGTTGGACTTCTCACAGCGCTCAAATTCTCCAGGATCATCATCCTTGCTGCTCAATTTCGGCTTCGGAGCTCTTTCAGAGCAATTTGATGGTGCCAATGGTAGCCCAGCTTGGTGTTTCTCAGCAGAGTTGTGAACTGCATAGAGAGAAGATGAAGAGAATTGAGAATAAGGAGGAAGAGAAGCAGGATGTTGAGAAGAAGAAAAAAAATACTTCCAATCGGATGGTTCAGCTCAAACTTTGCTAA

Coding sequence (CDS)

ATGGCGCGCCGTTGGACTTCTCACAGCGCTCAAATTCTCCAGGATCATCATCCTTGCTGCTCAATTTCGGCTTCGGAGCTCTTTCAGAGCAATTTGATGGTGCCAATGGTAGCCCAGCTTGGTGTTTCTCAGCAGAGTTGTGAACTGCATAGAGAGAAGATGAAGAGAATTGAGAATAAGGAGGAAGAGAAGCAGGATGTTGAGAAGAAGAAAAAAAATACTTCCAATCGGATGGTTCAGCTCAAACTTTGCTAA

Protein sequence

MARRWTSHSAQILQDHHPCCSISASELFQSNLMVPMVAQLGVSQQSCELHREKMKRIENKEEEKQDVEKKKKNTSNRMVQLKLC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 47..77
NoneNo IPR availableCOILSCoilCoilcoord: 82..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G001950.1ClCG09G001950.1mRNA