
ClCG09G001170 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGGTTCTCCGGGATCGGGTATGTTTGATGTGAAACGTCTATCTGTAACCAAATTAGAGTGATAACGATGAGATCCACATCGATGTTCTCTTGCTTTGGTTTATTGTTATCTCTGGACGTGATGGGGTCGCATTGTGAATTATACTAGAGAAAATGGACAATGGTTGGAAACTGGAATAACTTCTTTTTTGAGTATTCTAGCGTTGGTACTTTGTAAAGTTTATAAGGAGTTATATTTAACTTGTGGCCAATTTGGGTTCAACTAACGATGTTTAGAACTTGAAAAATACAAAAATCAAGAAGATGAATTTGTAAATAAATGCATTTTTGACCTTGCATGGAACAAATAATGTCTCAAGAAAACTACCTTATTGATTTCTTTATTGCCCAGTTACTTATTTCCCCCCCTTTGATCAATGAGACCTGGTCATCATTATTATATGCTTGATCCTTAGCTGAGTTATCTACATGGAAACACACCGATCATACTCAGCTTGTTTCTAGTCTTCTGTAAGTTATCCTGGCTGACATAGTTCAATGATTTTATCCTTAGTTGGGGGACATATCAAACAAAGATGGTGAAGCTTACAATGATTGCCCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCGAGAGGTCAAAATGAGGCTTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCAGTATCCATACGTGATTGGCCTTTCACATTTAACTTATAGTATTTGTTGGCAGGCTAGTTTTATATCTGCATGTCCATGATGCCATGATGTATATTTTACTAAGTAAATTAGTAAGTAGCTTTTCTGTTTGCTCCTTCGGCATTACAACCATTCTGATTTGTTATGGGTTACAAGAGGCTAAAATGGAAACATTGTTATCCCCATTTCTGTTTGTTTTTTTTTTGGTTGTGGAAAGGAAATTGTGACCCTGGGGCCTGGACAAACTAATATTATCCTGACAATTTGATGGTAGCTTGCTGAAAAGGTTTTGGTTTCAGATAAAGGAGGTTGATGTTGAATATGAAAACTTATTTGATTTTACCATTCTTGAGTTCAATGTGTGAAGTATTCAACATATAAATGTGTCTCATCAAGTCTTTGAGAATTATGGTTTATTGATTTAAACTGTCTAGAAGATTGTTAGCTCAAATTATGCTCTTGACAACCGTCATTTTACCTTGACCTGAGTTTCTAGCTATATAATTGAAGGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAAAAACTTGCCTTTCAATACCTTGAAGACTTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGGTATGCATTTCTTGGCTTTATATAAATAATTCATATGACCTTTGAACCTCTTAGCTTTATTTTACTTTCCTTTTGCTTGACTTGAAACCTTGTTTTCCACCTCCACCGCCTTTTATGTTCAACAGATACATACATACAGAAGACCAAGAAATTGTACCAGGATACCCGCACTCAACGTAATATTGCGAAGTTGAATGATGAACTTTACGAAGTCCACCAGATAATGACCCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGATCGTAAGATATTTCCTTTTCCTTTTATCTTCTAATTTTATTCAAGTGTGGCTATGAATTATCCTATAGTAAAATGATGTGATAAAGCATTATGGATCCTTTGTTTTCTGTTGATGTGAGTAGTTCAACTATCATTACAAACTAAATCATATTGTTCCCAGTTCCTAGGTGTGTGAGATTTGAGAATCTTTGTTATTTGAAACGGTTAGCACGGATTATATTAATTAATTCTGGGAGAGATAAATATCATTGCAGCTTTCTTGAAGGGGTTTGCAGAATCATGATTCAGCAGTGTCAAAGATGTTAACTTATTGATTTTAAACTATTAAATTTTTGCAGAGGTCAGTCAAATGTCAAGTAGGTTGACTTCAGAATCCCGCATATATGCCGACAAGGCGAGAGATCTGAACCGGCAGGTTAGCATCATTTTATTGCTTCATGTGTGCTTTCAATTTGGTCGAAGTTGAATGTTTGCCTCAAAGCATGTGGACTTTGAATGAAAATAATATTTTGCCAATGGTTTAATGTATCATCATCAAGTAAACCTTTTTGCATGCTTTTGATATTGCTCATGAATGTTGATACTGGTTTGCTAATTATTTAGAAAATAAGAAACAAAGAATACCATCGAACAAAAAAGGGAATACAGCTTAAAAGCCAGCGGGAAAATGAATCCCTTGCCTAGGAGGCTAGAAAAAAACTCCCCTCCATTCTTGATCAAAAATGCTGCTGTAGTTATGAAAATCCTTACATGAGGAACTTCAAGTGGTAGCTATCTGCTGTACATTTAGCCAAAAACCATGAAGACTTCAACAAACATCATTAAAAATCCCATTGTTCCTCTCTAACCAAATGGACCAGAAACTGGGTTTGCCTTTTTCACAATCTTCTAGCTTTGCCTTTAAGCCACCCTCTCAAAAGCAACTCTGTGGGCCAGTCTGTAACATCATCTTGATTCTTGGAAACAGTAGTTGAGCCTAAAAATCTTCCTGAGGAAGAGGTATCATATTTGAATTCTATTTTGAGTGTTGGGCATCTTAGATCAAATGTGAAACTCAACTTTTTTTCTTTTTGGCAAACTTACCCTCCTAATTGAGCTTTGACAATGGGATGGACAGGTTGGTGGCCTGGCCTTGGGGTTGAACTTGATATTAGCTGCTTTACTAGAAAAGACGCCAATTCTTTAAGTTTCCAAACCTCTCCATCACTTCCAATTCCTAACCTTATAAGGACGAAGTTTATTCCATGCAAATATGCATATAAGAAACAAAGAACAAGTATTCTATTTCTCTGGTGGTGGGGGCCTTATAAATCATACCTTTGGTGGTTGAAAGGAGTATAGTTACTGGAAATGCACTTGGAAGACATTTAAATTGAAATAAATGAATAAATATCAATGATTTATCCTGTTTTGAGATCCAGAATACAGACCGGCATTTGTATCAGAAATTTTAATGCGCCTGAAGTTGTGAGTAGTTTTGCAATGTGGTTGAAGAAAATATAAGCACAAGACATTGTAGGTCATCACTCTTATCCTGCTGATTTTCCAAATTTCACGAGTATTTGCACTGTAATCCAAAATTGTGCATGATTTGTTGTTAACTGATCTCATAAACATTGTCAATATCTCATAGGATGCTTTCTATAAGTTGCGTCTCTGGAAAGCTTGTGCGCTCATTTTCGAGTGAAATTACTTAATTTCTTTTCTTTCTTAAAATTTTTGAATCCAGGCTTTAATTCGAAAGTGGGCTCCTGTTGCTATTGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGGTGATTTAGTTGGTGTTCCAGTTAATCTTTTTAACTCATTTTCAGGCTTCTCTTTGCTTTTAGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAG ATGGATAGTTGGGGGACATATCAAACAAAGATGGTGAAGCTTACAATGATTGCCCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCGAGAGGTCAAAATGAGGCTTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCAGTATCCATACGTGATTGGCCTTTCACATTTAACTTATAGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAAAAACTTGCCTTTCAATACCTTGAAGACTTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGATACATACATACAGAAGACCAAGAAATTGTACCAGGATACCCGCACTCAACGTAATATTGCGAAGTTGAATGATGAACTTTACGAAGTCCACCAGATAATGACCCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGATCAGGTCAGTCAAATGTCAAGTAGGTTGACTTCAGAATCCCGCATATATGCCGACAAGGCGAGAGATCTGAACCGGCAGGCTTTAATTCGAAAGTGGGCTCCTGTTGCTATTGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGGCTTCTCTTTGCTTTTAGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAG ATGGATAGTTGGGGGACATATCAAACAAAGATGGTGAAGCTTACAATGATTGCCCGTGTTACTGATGGTCTTCCTCTAGCAGAGGGACTGGATGATGGCCGTGATATGCAAGATGCAGAATTCTACAAGCAGCAAGTGAAGGCTCTGTTTAAGAACTTATCGAGAGGTCAAAATGAGGCTTCAAGAATGTCTATCGAGACAGGCCCATATGTTTTTCAGTATCCATACGTGATTGGCCTTTCACATTTAACTTATAGAAGGGTCTGTTATTTGACTATGTGTGATCGTGCTTATCCAAAAAAACTTGCCTTTCAATACCTTGAAGACTTGAAGAATGAATTTGAACGTGTCAATGGGGCTCAAATTGAAACTGCTGCTAGGCCTTATGCATTCATTAAATTTGATACATACATACAGAAGACCAAGAAATTGTACCAGGATACCCGCACTCAACGTAATATTGCGAAGTTGAATGATGAACTTTACGAAGTCCACCAGATAATGACCCGCAATGTTCAGGAAGTTCTTGGTGTTGGTGAAAAGTTAGATCAGGTCAGTCAAATGTCAAGTAGGTTGACTTCAGAATCCCGCATATATGCCGACAAGGCGAGAGATCTGAACCGGCAGGCTTTAATTCGAAAGTGGGCTCCTGTTGCTATTGTGTTTGGAGTTGTATTCCTCCTATTCTGGTTCAAATCAAAGATCTGGCTTCTCTTTGCTTTTAGCTTTGGCTTAATGGGTTCAGATATCAGAGACTTGAAACTGGGCTAG MDSWGTYQTKMVKLTMIARVTDGLPLAEGLDDGRDMQDAEFYKQQVKALFKNLSRGQNEASRMSIETGPYVFQYPYVIGLSHLTYRRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTYIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRIYADKARDLNRQALIRKWAPVAIVFGVVFLLFWFKSKIWLLFAFSFGLMGSDIRDLKLG Homology
BLAST of ClCG09G001170 vs. NCBI nr
Match: XP_038898947.1 (25.3 kDa vesicle transport protein [Benincasa hispida]) HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113 Identity = 215/232 (92.67%), Postives = 217/232 (93.53%), Query Frame = 0
BLAST of ClCG09G001170 vs. NCBI nr
Match: XP_023549165.1 (25.3 kDa vesicle transport protein-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113 Identity = 214/232 (92.24%), Postives = 217/232 (93.53%), Query Frame = 0
BLAST of ClCG09G001170 vs. NCBI nr
Match: XP_008462269.1 (PREDICTED: 25.3 kDa vesicle transport protein [Cucumis melo] >XP_008462270.1 PREDICTED: 25.3 kDa vesicle transport protein [Cucumis melo] >XP_011659609.1 25.3 kDa vesicle transport protein [Cucumis sativus] >KGN45465.1 hypothetical protein Csa_015771 [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 8.9e-112 Identity = 212/226 (93.81%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. NCBI nr
Match: XP_022954257.1 (25.3 kDa vesicle transport protein [Cucurbita moschata] >XP_022954258.1 25.3 kDa vesicle transport protein [Cucurbita moschata] >XP_023549166.1 25.3 kDa vesicle transport protein-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549167.1 25.3 kDa vesicle transport protein-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7013968.1 25.3 kDa vesicle transport protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111 Identity = 212/226 (93.81%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. NCBI nr
Match: XP_022150420.1 (25.3 kDa vesicle transport protein [Momordica charantia] >XP_022150428.1 25.3 kDa vesicle transport protein [Momordica charantia]) HSP 1 Score: 412.1 bits (1058), Expect = 3.4e-111 Identity = 210/226 (92.92%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy Swiss-Prot
Match: Q94AU2 (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 3.1e-107 Identity = 195/226 (86.28%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy Swiss-Prot
Match: Q5ZJW4 (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.7e-44 Identity = 98/224 (43.75%), Postives = 145/224 (64.73%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy Swiss-Prot
Match: O08547 (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3) HSP 1 Score: 177.2 bits (448), Expect = 2.4e-43 Identity = 97/224 (43.30%), Postives = 144/224 (64.29%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy Swiss-Prot
Match: Q5RAI9 (Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3) HSP 1 Score: 177.2 bits (448), Expect = 2.4e-43 Identity = 97/224 (43.30%), Postives = 144/224 (64.29%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy Swiss-Prot
Match: Q4KM74 (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus OX=10116 GN=Sec22b PE=1 SV=3) HSP 1 Score: 177.2 bits (448), Expect = 2.4e-43 Identity = 97/224 (43.30%), Postives = 144/224 (64.29%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy TrEMBL
Match: A0A1S3CGL3 (25.3 kDa vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103500668 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 4.3e-112 Identity = 212/226 (93.81%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy TrEMBL
Match: A0A0A0K6X0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448760 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 4.3e-112 Identity = 212/226 (93.81%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy TrEMBL
Match: A0A6J1GQL3 (25.3 kDa vesicle transport protein OS=Cucurbita moschata OX=3662 GN=LOC111456568 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 5.6e-112 Identity = 212/226 (93.81%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy TrEMBL
Match: A0A6J1D9F3 (25.3 kDa vesicle transport protein OS=Momordica charantia OX=3673 GN=LOC111018579 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111 Identity = 210/226 (92.92%), Postives = 214/226 (94.69%), Query Frame = 0
BLAST of ClCG09G001170 vs. ExPASy TrEMBL
Match: A0A6J1JTF4 (25.3 kDa vesicle transport protein-like OS=Cucurbita maxima OX=3661 GN=LOC111488712 PE=3 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 2.1e-111 Identity = 210/226 (92.92%), Postives = 213/226 (94.25%), Query Frame = 0
BLAST of ClCG09G001170 vs. TAIR 10
Match: AT1G11890.1 (Synaptobrevin family protein ) HSP 1 Score: 389.4 bits (999), Expect = 2.2e-108 Identity = 195/226 (86.28%), Postives = 209/226 (92.48%), Query Frame = 0
BLAST of ClCG09G001170 vs. TAIR 10
Match: AT5G52270.1 (SNARE-like superfamily protein ) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-22 Identity = 57/169 (33.73%), Postives = 98/169 (57.99%), Query Frame = 0
BLAST of ClCG09G001170 vs. TAIR 10
Match: AT5G58060.1 (SNARE-like superfamily protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05 Identity = 32/124 (25.81%), Postives = 60/124 (48.39%), Query Frame = 0
BLAST of ClCG09G001170 vs. TAIR 10
Match: AT5G58180.1 (Synaptobrevin family protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05 Identity = 30/122 (24.59%), Postives = 61/122 (50.00%), Query Frame = 0
BLAST of ClCG09G001170 vs. TAIR 10
Match: AT5G58060.2 (SNARE-like superfamily protein ) HSP 1 Score: 47.0 bits (110), Expect = 2.7e-05 Identity = 32/124 (25.81%), Postives = 60/124 (48.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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