ClCG09G000780 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTAATCTTGGGCCAGAACTGGGCTCTATAAAGATTTCGTTAGAACGAAACGACAAGTCGTCTCGCAATCGGAGCTGTCGAGACGTATATACCGTCTTTTAGTTTCGTCGACGATGGGGAAACTGGAAAGTGACAGTCCAGCGAACGGACACGAGTGAGTGAGTGAGACCAGGTTAATCAATCCCGCGGAAAAGCTCGAATGGAGGAGCCAAAGGCTGAGATCAAAGATTCATCCTCAGGTATTTCCAAACTTTCAAATCGTTCTCGTCAACTTCATTTTAGGCACTATCGTTTTGATTGCTCTGATGTTATGTGCGTTTCTTCAATATGCTGTTTCTGAAATAAAACGAGCTTGAAATTGTTGCACTAAGTAAAGATCATCCAGTGGCATACAGTTGATAACGTATTTCAGCTTTTTCAGTGATTTGTTGTCGGCGAGTGTTGCGCTATCGAGCTAAAAAACACTTCACAGCCCATATTTTCAGTAATTGTTGGCGTTGATTGGTTACTGCGGCTATTTCTAAGGCAATGTTTGGTTTCAAATCATTAGCATGGTTTAGGTTTTTAGGATTAATTGATTCAATGGGAATTGTCAATTATGTTTAGTTGAAAGGAATCTGCTGTCATTTCTGAAGAGATACTTTTCCTTCTGCGCTTATTAGAGCAAATTATTTTCAAAATGGATGAACTTCGAACTTATGGTTATTAAGGTGTTGCTCCAATTTTATGAGGAGACTTTTTAATTCAGAAACGACTTGTCTCTGTTAGAGATTCATAGTTTGATTTTGCTCGAGGTGTTTGGCCGACTGACATTATATATATATTTTCTTCTTGGCGTGCAATGAGAAGAAGAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCAATGATATTGACGACACTACGCCCGCCGATGAAGTAAAGGCCCCCGGAGTGTTTGAGAGAGTCAAGGAAGAGGTTGAGGCCCTGGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAG ATGTTTAATCTTGGGCCAGAACTGGGCTCTATAAAGATTTCGTTAGAACGAAACGACAAGTCGTCTCGCAATCGGAGCTGTCGAGACGTTAATCAATCCCGCGGAAAAGCTCGAATGGAGGAGCCAAAGGCTGAGATCAAAGATTCATCCTCAGAAGAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCAATGATATTGACGACACTACGCCCGCCGATGAAGTAAAGGCCCCCGGAGTGTTTGAGAGAGTCAAGGAAGAGGTTGAGGCCCTGGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAG ATGTTTAATCTTGGGCCAGAACTGGGCTCTATAAAGATTTCGTTAGAACGAAACGACAAGTCGTCTCGCAATCGGAGCTGTCGAGACGTTAATCAATCCCGCGGAAAAGCTCGAATGGAGGAGCCAAAGGCTGAGATCAAAGATTCATCCTCAGAAGAAGATGCAAAATCGCCCAATATTTTTGAAAGAGCGAAAGAAGAGATAGAGGCTGTGATCCACTCTAATAAATCACCACGGCATCACAAAGAAACACATGGAAGAAGCAATGATATTGACGACACTACGCCCGCCGATGAAGTAAAGGCCCCCGGAGTGTTTGAGAGAGTCAAGGAAGAGGTTGAGGCCCTGGTGGGAGCAATTCATCCCAAGAAGGATTCCGGCAATCATTAG MFNLGPELGSIKISLERNDKSSRNRSCRDVNQSRGKARMEEPKAEIKDSSSEEDAKSPNIFERAKEEIEAVIHSNKSPRHHKETHGRSNDIDDTTPADEVKAPGVFERVKEEVEALVGAIHPKKDSGNH Homology
BLAST of ClCG09G000780 vs. NCBI nr
Match: XP_038900254.1 (uncharacterized protein LOC120087339 [Benincasa hispida] >XP_038900255.1 uncharacterized protein LOC120087339 [Benincasa hispida]) HSP 1 Score: 166.4 bits (420), Expect = 1.6e-37 Identity = 84/91 (92.31%), Postives = 88/91 (96.70%), Query Frame = 0
BLAST of ClCG09G000780 vs. NCBI nr
Match: XP_008462344.1 (PREDICTED: uncharacterized protein LOC103500717 [Cucumis melo] >KAA0059422.1 uncharacterized protein E6C27_scaffold242G001490 [Cucumis melo var. makuwa] >TYK03904.1 uncharacterized protein E5676_scaffold347G001000 [Cucumis melo var. makuwa]) HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of ClCG09G000780 vs. NCBI nr
Match: KGN45517.1 (hypothetical protein Csa_016837 [Cucumis sativus]) HSP 1 Score: 156.0 bits (393), Expect = 2.2e-34 Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of ClCG09G000780 vs. NCBI nr
Match: XP_022144348.1 (uncharacterized protein LOC111014044 isoform X2 [Momordica charantia]) HSP 1 Score: 155.6 bits (392), Expect = 2.9e-34 Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of ClCG09G000780 vs. NCBI nr
Match: XP_022144340.1 (uncharacterized protein LOC111014044 isoform X1 [Momordica charantia]) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33 Identity = 77/92 (83.70%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of ClCG09G000780 vs. ExPASy TrEMBL
Match: A0A5D3BY12 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001000 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of ClCG09G000780 vs. ExPASy TrEMBL
Match: A0A1S3CGT3 (uncharacterized protein LOC103500717 OS=Cucumis melo OX=3656 GN=LOC103500717 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35 Identity = 81/91 (89.01%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of ClCG09G000780 vs. ExPASy TrEMBL
Match: A0A0A0KAY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450740 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 1.1e-34 Identity = 80/91 (87.91%), Postives = 84/91 (92.31%), Query Frame = 0
BLAST of ClCG09G000780 vs. ExPASy TrEMBL
Match: A0A6J1CT17 (uncharacterized protein LOC111014044 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.4e-34 Identity = 76/91 (83.52%), Postives = 85/91 (93.41%), Query Frame = 0
BLAST of ClCG09G000780 vs. ExPASy TrEMBL
Match: A0A6J1CRC8 (uncharacterized protein LOC111014044 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014044 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 5.3e-34 Identity = 77/92 (83.70%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of ClCG09G000780 vs. TAIR 10
Match: AT1G72690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18 Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0
BLAST of ClCG09G000780 vs. TAIR 10
Match: AT5G57000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 85.5 bits (210), Expect = 3.4e-17 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of ClCG09G000780 vs. TAIR 10
Match: AT5G57000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of ClCG09G000780 vs. TAIR 10
Match: AT1G17490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 9.0e-10 Identity = 39/83 (46.99%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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