ClCG09G000760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G000760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	RNA-binding (RRM/RBD/RNP motifs) family protein
Location	CG_Chr09: 661109 .. 663774 (-)
RNA-Seq Expression	ClCG09G000760
Synteny	ClCG09G000760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGTTTCAGCGCGATTTCTTAAGCCCTTCCTCTGTTAGGGTTTTACTCAGCAGAGGAGAAAAAGGAAAAATAGCAGAAGAAATTCAGTATTTATTTTACCAGTAGATCATAGTTTTCATAGATTAGAAGAAGAATTTCCAGCTTCAATGGCGGAAGAGAGGCATTACAATCCTGACTCCAATGCTTATAATGGCGAAAATTTCCTCCAGATGTACGATCAACAGCACCAGTTTGATTTGGGGAGTGAATTGGAACAAGGGAATGTAGATAGTATAGGAAGTGAAATTAAGCATTCCACAAGTCATTATGAATCTTCTTCCAGTGGGTTAGTTTTTTTTATCGTTCTTTGTTATTTTTCTGAATAGAGCGGTCATTATTTTTATGGGGAATTAGTTGCTGAATCGAACTTTGTTGGAGCTTAACACTTCGCTTTTTCTTATTTGGCAGCAAACTTTTCGTTGGAGGCGTGGCTTGGGAGACCACTAAAGGTAAATGTAAATTTAGTAAGTTATTGATTACTGGGGTGTGGTCGTACCTTAGAAAAAGTGGTTATTTTTGTTCGTTTAATCATTAATATTTTCTTGTATTGCAGTCACATGATGACAGATGGAATCTTTGATACATTATTATTCTTATTTGATAAAATATGCAATTTCATTAAACAAGAACTACCAAATATATATATATATATATCCTCCAATGTTGGTTTAATGTCCTTCATAATTAGGCATAAATCAAGTCGCATATATTTCTGTAGTTGATTTATCTTTTGAGCTTATATTTCTAGTTGTACAATTCTTTGGTGAATATAATTTGTTTATGATTATTGTTATTATTCTAGCTTTCCTTCTAGCTTTTGAGCTTATATCAGTTTCCTGTTTTCAGTTCCCACTATAGAGTTCTCTTTCTTTTATCTTTTAATTCCACATTATCTTCATGTGCATCTTGATTATTTTGCTAGGGGCCTACGTAAGTGTCATTTGAAAATTCGTACGAAATTGTGTTTCCTTTGTTGCTATGATTTATGCTCATTTTATAGTGTGTAAATTTGGCCCTTTTCTCTCTTCAATTTGAAGAGACTAGTTAATCTTAGTATAACTCAGCAATAATTGATATATACTCCTCTCCTCGATGTCGGAAGTTTGAATCCCATTCCTCACATTTGTTGTAATCAAAAGCCTAGTTAATGTTAAAACTTTTCTAGGGTTTAATGGCCCCCATCTACCTGGCATCCTTAGGAAAGGAAAAATTGATATTTCTTTTGTCACGTTGCCATTTTGCTAATAAGTTATTGTTTCCACGTTATTCTTTCTGAATTCTGACTGTCATCATCCTGTCATATATGTCTTGACTATTATTTATTTATTATTGTTTGGTATTCAGAGACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGAAGGCCACGCGGGTTCGGCTTCGTAACATTCTGTGATCCTGCCGTTGCTGACATGGTTTTGAAAATAGACCATGTTATAGATGGCAGAGCGGTAATATAAATATTTTTTGGTAATTCTAAACTTGTAATCTGAATGATGGAAAATGGTAAATGGAAAATTTTTATATCACTATCAGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAAAAGATCTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGGTATTATTGCAGAAGTCTACATATATTTTCTTTCCTGATTGATTCTCGTTTTCAGAATTGATATTAATTGAAAGATGCTCTGTGTGGATGTCTCATAAACATTGCAGAGGAGTTTAAGGACTACTTCTCTTCTTTTGGTAGAATTCTTGAACACCAAATCATGATAGATTATAAAACGAAGCGGTCGAGAGGATTTGGATTTATCACTTTTGAGAACGAAGATTCAGTTGAAAATATCTTTGCTGGAGACAAAAAACATGAGCTTGGAGGCAAGCAGGTAAATGGGAAAAGGATTGAAACATAAAATTCTATATTTTTGTTGCTTACATGGACTTCTGTATGGTCAACATGATTAAAATGCAGGTGGAAATCAAGAAGGCTGTACCAAAAAGATTTGCTTATGATTTCAGTAGCAACACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGGGGGTTTATATGATGGTAATAAAATGGGCACAGATTTTGGTTGTTACGATGTATATGCTCCATATGGTGGGTACGGTGGAAACTACTCCAGTTTCTATGGCGCATACGGTTACGGTTTCGGTTACGGTGTTTCCATGTATATGAATGGTAGATACGGGTTGAATGGCTACGGCATCCCCGCAGCTGGATATGGAATGAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATATCATCCATATTGGTATTGAGCAAACTTTTCCTAGAAGGTTTCTATTGTGAAGATTTTGAACACGAGCACAGGTATAATTATCCATCTTAGTCGCTGTGCAGTTTGAGATTTTTTCAGTGTAATATAAATATTGTAGACAATTTTTCATTTCTCTTTTATTATTGTTGTTTTGTTTTCCCTAGAATATGAAATGATTTGATTGATAAAATGGAATGATGGAAC

mRNA sequence

CTCGGTTTCAGCGCGATTTCTTAAGCCCTTCCTCTGTTAGGGTTTTACTCAGCAGAGGAGAAAAAGGAAAAATAGCAGAAGAAATTCAGTATTTATTTTACCAGTAGATCATAGTTTTCATAGATTAGAAGAAGAATTTCCAGCTTCAATGGCGGAAGAGAGGCATTACAATCCTGACTCCAATGCTTATAATGGCGAAAATTTCCTCCAGATGTACGATCAACAGCACCAGTTTGATTTGGGGAGTGAATTGGAACAAGGGAATGTAGATAGTATAGGAAGTGAAATTAAGCATTCCACAAGTCATTATGAATCTTCTTCCAGTGGCAAACTTTTCGTTGGAGGCGTGGCTTGGGAGACCACTAAAGAGACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGAAGGCCACGCGGGTTCGGCTTCGTAACATTCTGTGATCCTGCCGTTGCTGACATGGTTTTGAAAATAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAAAAGATCTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGAGGAGTTTAAGGACTACTTCTCTTCTTTTGGTAGAATTCTTGAACACCAAATCATGATAGATTATAAAACGAAGCGGTCGAGAGGATTTGGATTTATCACTTTTGAGAACGAAGATTCAGTTGAAAATATCTTTGCTGGAGACAAAAAACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAAAAGATTTGCTTATGATTTCAGTAGCAACACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGGGGGTTTATATGATGGTAATAAAATGGGCACAGATTTTGGTTGTTACGATGTATATGCTCCATATGGTGGGTACGGTGGAAACTACTCCAGTTTCTATGGCGCATACGGTTACGGTTTCGGTTACGGTGTTTCCATGTATATGAATGGTAGATACGGGTTGAATGGCTACGGCATCCCCGCAGCTGGATATGGAATGAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATATCATCCATATTGGTATTGAGCAAACTTTTCCTAGAAGGTTTCTATTGTGAAGATTTTGAACACGAGCACAGGTATAATTATCCATCTTAGTCGCTGTGCAGTTTGAGATTTTTTCAGTGTAATATAAATATTGTAGACAATTTTTCATTTCTCTTTTATTATTGTTGTTTTGTTTTCCCTAGAATATGAAATGATTTGATTGATAAAATGGAATGATGGAAC

Coding sequence (CDS)

ATGGCGGAAGAGAGGCATTACAATCCTGACTCCAATGCTTATAATGGCGAAAATTTCCTCCAGATGTACGATCAACAGCACCAGTTTGATTTGGGGAGTGAATTGGAACAAGGGAATGTAGATAGTATAGGAAGTGAAATTAAGCATTCCACAAGTCATTATGAATCTTCTTCCAGTGGCAAACTTTTCGTTGGAGGCGTGGCTTGGGAGACCACTAAAGAGACGTTTAGTGATTACTTTAGCAAGTATGGGGAGATAGCAGATTCAGTCATAATGATAGACAAACACACTGGAAGGCCACGCGGGTTCGGCTTCGTAACATTCTGTGATCCTGCCGTTGCTGACATGGTTTTGAAAATAGACCATGTTATAGATGGCAGAGCGGTGGAAGTGAAGAGGACAGTTCCTAGGGCTGATATGAATGATAAATTGGTATCAAGAACAAAAAAGATCTTTGTTGGAGGAATACCACCTGGTTTAACTGAAGAGGAGTTTAAGGACTACTTCTCTTCTTTTGGTAGAATTCTTGAACACCAAATCATGATAGATTATAAAACGAAGCGGTCGAGAGGATTTGGATTTATCACTTTTGAGAACGAAGATTCAGTTGAAAATATCTTTGCTGGAGACAAAAAACATGAGCTTGGAGGCAAGCAGGTGGAAATCAAGAAGGCTGTACCAAAAAGATTTGCTTATGATTTCAGTAGCAACACTGCACAGACTTCTTCAGGATATGACATGTATAGATGTGGGGGTTTATATGATGGTAATAAAATGGGCACAGATTTTGGTTGTTACGATGTATATGCTCCATATGGTGGGTACGGTGGAAACTACTCCAGTTTCTATGGCGCATACGGTTACGGTTTCGGTTACGGTGTTTCCATGTATATGAATGGTAGATACGGGTTGAATGGCTACGGCATCCCCGCAGCTGGATATGGAATGAATGGATATGGAAAAGGATACGAAGGAAATGGTGGTTCAATGCCTGAGAGATATCATCCATATTGGTATTGA

Protein sequence

MAEERHYNPDSNAYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMYMNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY

Homology

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BLAST of ClCG09G000760 vs. NCBI nr
Match: XP_038898204.1 (protein gar2-like [Benincasa hispida])

HSP 1 Score: 619.8 bits (1597), Expect = 1.4e-173
Identity = 302/337 (89.61%), Postives = 317/337 (94.07%), Query Frame = 0


Query: 1   MAEERHYNPDSNAYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSG 60
           MAEERHYNPD NAYNGENFLQMYDQQHQFD+GSELEQGNVDS  + IKHST+HY+SSSSG
Sbjct: 366 MAEERHYNPDFNAYNGENFLQMYDQQHQFDMGSELEQGNVDSTSNGIKHSTNHYDSSSSG 425

Query: 61  KLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKI 120
           KLFVGGVAWETT+ETF+ YFSKYG+IADSVIM+DKHTGRPRGFGFVTFCDPAVADMVLKI
Sbjct: 426 KLFVGGVAWETTEETFNGYFSKYGKIADSVIMLDKHTGRPRGFGFVTFCDPAVADMVLKI 485

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQI 180
           DHVIDGRAVEVKRTVPR DMNDK VSRTKKIFVGGIPPGLTEEEFKDYFSSFGRI+EHQI
Sbjct: 486 DHVIDGRAVEVKRTVPRTDMNDKSVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 545

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSNTAQ 240
           MIDYKTKRSRGFGFITFENEDSVENIFAGDK HELGGKQVEIKKAVPKR AYD +SN A 
Sbjct: 546 MIDYKTKRSRGFGFITFENEDSVENIFAGDKIHELGGKQVEIKKAVPKRVAYDVNSNNAH 605

Query: 241 TSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMYMNG 300
            SSGYDMYRCGGLYDG KMGTDF  YDVYAPYGGYGGNY++FY AY YGFGYG SMYMNG
Sbjct: 606 MSSGYDMYRCGGLYDG-KMGTDFSRYDVYAPYGGYGGNYANFYSAYSYGFGYGGSMYMNG 665

Query: 301 RYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPY 338
           R+G+NGYG+PAAGYG NGYGKGYEGNGGSMPERYHPY
Sbjct: 666 RFGMNGYGVPAAGYGYNGYGKGYEGNGGSMPERYHPY 701

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BLAST of ClCG09G000760 vs. NCBI nr
Match: XP_011659642.1 (protein gar2 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 1.5e-167
Identity = 292/339 (86.14%), Postives = 316/339 (93.22%), Query Frame = 0


Query: 1   MAEERHYNPDSNAYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSG 60
           MA ERHYNPD NA NGEN  QMYDQQ QFD+G+ELEQ NVDS  SEIK+ST+ Y+SSSSG
Sbjct: 372 MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 431

Query: 61  KLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKI 120
           KLFVGGVAWETT++TF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMVLKI
Sbjct: 432 KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 491

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTEEEFKDYFSSFGRI+EHQI
Sbjct: 492 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 551

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSNTAQ 240
           MIDYKTKRSRGFGFITFENEDSVENIF+GD+ HELGGKQVEIKKAVPKR AYDF+SN+ Q
Sbjct: 552 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 611

Query: 241 TSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMYMNG 300
           T SGYDMYRCGGLYD + +GTDFG YD+YAPYGG+G NY+SFYGAY YGFGYG SMYMNG
Sbjct: 612 T-SGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNG 671

Query: 301 RYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           RYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 672 RYGMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 708

[Close]

BLAST of ClCG09G000760 vs. NCBI nr
Match: KGN45519.1 (hypothetical protein Csa_016070 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 1.5e-167
Identity = 292/339 (86.14%), Postives = 316/339 (93.22%), Query Frame = 0


Query: 1   MAEERHYNPDSNAYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSG 60
           MA ERHYNPD NA NGEN  QMYDQQ QFD+G+ELEQ NVDS  SEIK+ST+ Y+SSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKI 120
           KLFVGGVAWETT++TF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMVLKI
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTEEEFKDYFSSFGRI+EHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSNTAQ 240
           MIDYKTKRSRGFGFITFENEDSVENIF+GD+ HELGGKQVEIKKAVPKR AYDF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMYMNG 300
           T SGYDMYRCGGLYD + +GTDFG YD+YAPYGG+G NY+SFYGAY YGFGYG SMYMNG
Sbjct: 241 T-SGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNG 300

Query: 301 RYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           RYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 301 RYGMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]

BLAST of ClCG09G000760 vs. NCBI nr
Match: TYK03902.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 592.8 bits (1527), Expect = 1.9e-165
Identity = 288/342 (84.21%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFGYG SMY
Sbjct: 241 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMY 300

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 301 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of ClCG09G000760 vs. NCBI nr
Match: KAA0059423.1 (heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa])

HSP 1 Score: 592.8 bits (1527), Expect = 1.9e-165
Identity = 288/342 (84.21%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFGYG SMY
Sbjct: 619 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMY 678

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 679 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 719

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BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.3e-44
Identity = 118/289 (40.83%), Postives = 157/289 (54.33%), Query Frame = 0


Query: 57  SSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADM 116
           S  GKLFVGG++WET ++   ++F+ YGE++ +++M DK TGRPRGFGFV F DP+V D 
Sbjct: 3   SDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDR 62

Query: 117 VLKIDHVIDGRAVEVKRTVPRADM---------------NDKLVSRTKKIFVGGIPPGLT 176
           VL+  H ID R V+VKR + R +                     ++TKKIFVGG+PP LT
Sbjct: 63  VLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLT 122

Query: 177 EEEFKDYFSSFGRILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVE 236
           +EEF+ YF  +G + +  IM D  T R RGFGF++F++ED+V+++      H+L GKQVE
Sbjct: 123 DEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVL-HKTFHDLSGKQVE 182

Query: 237 IKKAVPKRFAYDFSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSS 296
           +K+A+PK                 D    GG   G  MG           Y GYGGN SS
Sbjct: 183 VKRALPK-----------------DANPGGG---GRSMGGGGS-----GGYQGYGGNESS 242

Query: 297 FYGAYGYGFGYGVSMYMNG--RYGLNGYGIPAAGYGMNGYGKGYEGNGG 329
           + G              NG   YG +GYG   AGYG    G GY   GG
Sbjct: 243 YDGRMDSNRFLQHQSVGNGLPSYGSSGYG---AGYGNGSNGAGYGAYGG 262

[Close]

BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.5e-40
Identity = 88/218 (40.37%), Postives = 133/218 (61.01%), Query Frame = 0


Query: 12  NAYNGENFL-QMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSGKLFVGGVAWE 71
           NA +GEN     Y++      GS   + N D+        TS + +   GK+F+GG+ WE
Sbjct: 120 NAEDGENSKNDNYNENQSALTGSGAMESNEDN-----AEETSPF-NREDGKMFIGGLNWE 179

Query: 72  TTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKIDHVIDGRAVE 131
           TT ++  DYF ++GE+ D  +M D  TGR RGFGF+TF +P   + V+  +H +DG+ ++
Sbjct: 180 TTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSKEHHLDGKIID 239

Query: 132 VKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQIMIDYKTKRSR 191
            KR +PR +       +T K+FVGG+P   TEEEF+++F+ FGR+L+  +M+D  T R R
Sbjct: 240 PKRAIPREEQ-----EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPR 299

Query: 192 GFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPK 229
           GFGF+T+ENE +VE   +      + GK VE+K+A PK
Sbjct: 300 GFGFVTYENESAVEATMS-QPYITIHGKPVEVKRATPK 325

[Close]

BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot
Match: Q99383 (Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HRP1 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 91/220 (41.36%), Postives = 137/220 (62.27%), Query Frame = 0


Query: 56  SSSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVAD 115
           S  S K+F+GG+ W+TT++   +YF KYG + D  IM D  TGR RGFGF++F  P+  D
Sbjct: 155 SKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVD 214

Query: 116 MVLKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRI 175
            V+K  H++DG+ ++ KR +PR D  DK    T KIFVGGI P +  +EF+++FS +G I
Sbjct: 215 EVVKTQHILDGKVIDPKRAIPR-DEQDK----TGKIFVGGIGPDVRPKEFEEFFSQWGTI 274

Query: 176 LEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFS 235
           ++ Q+M+D  T +SRGFGF+T+++ D+V+ +   +K  +   +++EIK+A P R     S
Sbjct: 275 IDAQLMLDKDTGQSRGFGFVTYDSADAVDRV-CQNKFIDFKDRKIEIKRAEP-RHMQQKS 334

Query: 236 SNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGY 276
           SN    + G +M R GG + GN+   DF         GGY
Sbjct: 335 SNNGGNNGGNNMNRRGGNF-GNQ--GDFNQMYQNPMMGGY 364

[Close]

BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot
Match: Q96DH6 (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 103/277 (37.18%), Postives = 143/277 (51.62%), Query Frame = 0


Query: 40  VDSIGSEIKHSTSHYESSSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGR 99
           +++ GS+    +++      GK+F+GG++W+T+ ++  DYFSK+GEI + ++M D  T R
Sbjct: 1   MEANGSQGTSGSANDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR 60

Query: 100 PRGFGFVTFCDPAVADMVL-KIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPP 159
            RGFGFVTF DPA  D VL +  H +D + ++ K   PR     K+V+RTKKIFVGG+  
Sbjct: 61  SRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRR-AQPKMVTRTKKIFVGGLSA 120

Query: 160 GLTEEEFKDYFSSFGRILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGK 219
               E+ K YF  FG++ +  +M D  T R RGFGF+TFENED VE +      HE+  K
Sbjct: 121 NTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKV-CEIHFHEINNK 180

Query: 220 QVEIKKAVPKRFAYDFSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGN 279
            VE KKA PK   +   +        Y M       D   +G     Y  +     YG  
Sbjct: 181 MVECKKAQPKEVMFPPGTRGRARGLPYTM-------DAFMLGMGMLGYPNFV--ATYGRG 240

Query: 280 YSSFYGAYGYGFGYGVSMYMNGRYGLNGYGIPAAGYG 316
           Y  F  +YGY F                 G PAA YG
Sbjct: 241 YPGFAPSYGYQFP----------------GFPAAAYG 250

[Close]

BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot
Match: Q9VVE5 (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 2.1e-39
Identity = 98/228 (42.98%), Postives = 134/228 (58.77%), Query Frame = 0


Query: 60  GKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVL- 119
           GK+F+GG++W+T+ E+  DYF +YG+I+++++M D  T R RGFGFVTF DP   D VL 
Sbjct: 29  GKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLT 88

Query: 120 KIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEH 179
           +  H +DG+ V+ K   PR   + K+V+RTKKIFVGG+    T E+ K YF  FG I + 
Sbjct: 89  QGTHELDGKKVDPKVAFPRR-AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDA 148

Query: 180 QIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKR--FAYDFSS 239
            +M D +T R RGFGF+TF++ED V+ +      HE+  K VE KKA PK      + + 
Sbjct: 149 MLMFDKQTNRHRGFGFVTFQSEDVVDKV-CEIHFHEINNKMVECKKAQPKEVMLPANLAK 208

Query: 240 NTAQTSSGYD--MYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSF 283
             A   S YD  M+  G L +    G     Y  YA   GY G Y SF
Sbjct: 209 TRAAGRSAYDNIMWGLGTLPE----GFPAAAYAAYAAGRGYSG-YPSF 249

[Close]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL
Match: A0A0A0K9M1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 7.4e-168
Identity = 292/339 (86.14%), Postives = 316/339 (93.22%), Query Frame = 0


Query: 1   MAEERHYNPDSNAYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESSSSG 60
           MA ERHYNPD NA NGEN  QMYDQQ QFD+G+ELEQ NVDS  SEIK+ST+ Y+SSSSG
Sbjct: 1   MAGERHYNPDFNACNGENLAQMYDQQKQFDMGNELEQANVDSTRSEIKNSTTQYDSSSSG 60

Query: 61  KLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMVLKI 120
           KLFVGGVAWETT++TF DYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMVLKI
Sbjct: 61  KLFVGGVAWETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMVLKI 120

Query: 121 DHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILEHQI 180
           DH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTEEEFKDYFSSFGRI+EHQI
Sbjct: 121 DHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRIIEHQI 180

Query: 181 MIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSNTAQ 240
           MIDYKTKRSRGFGFITFENEDSVENIF+GD+ HELGGKQVEIKKAVPKR AYDF+SN+ Q
Sbjct: 181 MIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEIKKAVPKRVAYDFNSNSGQ 240

Query: 241 TSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMYMNG 300
           T SGYDMYRCGGLYD + +GTDFG YD+YAPYGG+G NY+SFYGAY YGFGYG SMYMNG
Sbjct: 241 T-SGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGVNYASFYGAYNYGFGYGASMYMNG 300

Query: 301 RYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           RYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 301 RYGMNGYGTPSVGYGINGYGKGYEGNGGSMPERFHPYWY 337

[Close]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL
Match: A0A5A7UU27 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G001500 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 9.0e-166
Identity = 288/342 (84.21%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 379 MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 438

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 439 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 498

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 499 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 558

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 559 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 618

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFGYG SMY
Sbjct: 619 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMY 678

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 679 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 719

[Close]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL
Match: A0A5D3BYF2 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00980 PE=4 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 9.0e-166
Identity = 288/342 (84.21%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 1   MAEERHYNPDFNICHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFGYG SMY
Sbjct: 241 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGYGASMY 300

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 301 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL
Match: E5GCB7 (Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.6e-165
Identity = 287/342 (83.92%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 359 MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 418

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 419 SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 478

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 479 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 538

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 539 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 598

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFG+G SMY
Sbjct: 599 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMY 658

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 659 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 699

[Close]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL
Match: A0A1S3CHA1 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500720 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.6e-165
Identity = 287/342 (83.92%), Postives = 316/342 (92.40%), Query Frame = 0


Query: 1   MAEERHYNPDSN---AYNGENFLQMYDQQHQFDLGSELEQGNVDSIGSEIKHSTSHYESS 60
           MAEERHYNPD N     NG+NFLQ  +QQ QFD+ +ELEQ NVDS  SEIK+ST+ Y+SS
Sbjct: 1   MAEERHYNPDFNLCHGENGQNFLQTCNQQEQFDMRNELEQANVDSTRSEIKNSTTQYDSS 60

Query: 61  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 120
           SSGKLFVGGVAWETT++TFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPA+ADMV
Sbjct: 61  SSGKLFVGGVAWETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAIADMV 120

Query: 121 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 180
           LKIDH+IDGRAVEVKRTVPRADMNDK+VSRTKKIFVGGIPPGLTE EFKDYFSSFGRI+E
Sbjct: 121 LKIDHIIDGRAVEVKRTVPRADMNDKMVSRTKKIFVGGIPPGLTEVEFKDYFSSFGRIIE 180

Query: 181 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 240
           HQIMIDYKTKRSRGFGFITFENEDSV+NIF+GD+ HELGGKQVEIKKAVPK+ AYDF+SN
Sbjct: 181 HQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIKKAVPKKVAYDFNSN 240

Query: 241 TAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFYGAYGYGFGYGVSMY 300
           +  TSSGYDMYRCGGLYD + +GTDFG YD+YAPYGG+GGNY+SFYGAY YGFG+G SMY
Sbjct: 241 SGHTSSGYDMYRCGGLYD-DIIGTDFGPYDLYAPYGGFGGNYASFYGAYNYGFGFGASMY 300

Query: 301 MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSMPERYHPYWY 340
           MNGRYG+NGYG P+ GYG+NGYGKGYEGNGGSMPER+HPYWY
Sbjct: 301 MNGRYGMNGYGAPSVGYGINGYGKGYEGNGGSMPERFHPYWY 341

[Close]

BLAST of ClCG09G000760 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 287.7 bits (735), Expect = 1.2e-77
Identity = 181/372 (48.66%), Postives = 228/372 (61.29%), Query Frame = 0


Query: 7   YNPDSNAYNGENFLQMYDQ---QHQFDLGSELEQGN----VDSIGSEIKHSTSHYESSSS 66
           YN D   Y+      ++D+   Q  F++ +  ++ N    VD+ G ++KHS  H  SSSS
Sbjct: 3   YNSD-RGYDDSYHHHVHDEQLPQSDFEVETFDDRRNGGAAVDTGGIQMKHSVDHRHSSSS 62

Query: 67  ----GKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVAD 126
               GKLFVGGV+WETT ETF++YF K+GE+ DSVIM D+ TG PRGFGFVTF D AVA+
Sbjct: 63  MSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAE 122

Query: 127 MVLKIDHVIDGRAVEVKRTVPRADMND--KLVSRTKKIFVGGIPPGLTEEEFKDYFSSFG 186
            VL+ DHVID R V++KRT+PR D +   K VS+T+KIFVGG+PP L E+E K+YF  +G
Sbjct: 123 KVLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYG 182

Query: 187 RILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYD 246
            I+EHQIM D+ T RSRGFGF+TF+ EDSV+ +F+  K HELG KQVEIK+A PKR   D
Sbjct: 183 DIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGRD 242

Query: 247 FSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGG-------NYSSFY--- 306
            S  +   S  YD       Y G K   D+  Y  Y  YGGYG        N + FY   
Sbjct: 243 NSFRSYGASGKYDQ---EDSYSG-KANEDYSMYSGYGGYGGYGAYAGNSMVNPAGFYGYG 302

Query: 307 GAYGYGFGYGVSMYMNGRYGLNGYGIPAAGYGM----------------NGYGKGYEGNG 338
           G YGYG+GYG  M+  G YG  GY    +GYG+                NG   G +GNG
Sbjct: 303 GGYGYGYGYGGQMFNMG-YGAGGYSHMGSGYGVAAAAAYGGGKSHGNGNNGSSSG-KGNG 362

[Close]

BLAST of ClCG09G000760 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-58
Identity = 140/292 (47.95%), Postives = 174/292 (59.59%), Query Frame = 0


Query: 58  SSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADMV 117
           S+GK+FVGG+A ETT   F  +F KYGEI DSVIM D+ TG+PRGFGFVT+ D +V D V
Sbjct: 40  SAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKV 99

Query: 118 LKIDHVIDGRAVEVKRTVPRADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFGRILE 177
           ++ +H+I G+ VE+KRT+PR  M+     +TKKIFVGGIP  + ++EFK++F  FG + E
Sbjct: 100 IQDNHIIIGKQVEIKRTIPRGSMSSN-DFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKE 159

Query: 178 HQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPKRFAYDFSSN 237
           HQIM D+ T RSRGFGF+T+E+ED V+++ A   + EL G QVEIKKA PK+     S  
Sbjct: 160 HQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKK---PNSVT 219

Query: 238 TAQTSSGYDMYRCGGLY-DGNKMGTDFGCYDVYAPY---GGYGGNYSSFYGAY------- 297
           T     G      GG Y DG   G   G      PY   GGYGG  S  YG Y       
Sbjct: 220 TPSKRFGDSRSNFGGGYGDGYGGGHGGGYGGPGGPYKSGGGYGGGRSGGYGGYGGEFGGY 279

Query: 298 -GYGFGYGVSMY-------MNGRYGLNGYGIPAAGYGMNGYGKGYEGNGGSM 331
            G G+G GV  Y        +GRYG  G G    GY M G G GY G  G M
Sbjct: 280 GGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGG-GGGYGGGPGDM 326

[Close]

BLAST of ClCG09G000760 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-54
Identity = 139/345 (40.29%), Postives = 185/345 (53.62%), Query Frame = 0


Query: 55  ESSSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVA 114
           + +S GK+F+GG+  +TT   F+ +F KYGEI DSVIM D+HTG+PRGFGF+TF DP+V 
Sbjct: 14  DGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVV 73

Query: 115 DMVLKIDHVIDGRAVEVKRTVPR-ADMNDKLVSRTKKIFVGGIPPGLTEEEFKDYFSSFG 174
           D V++  HVI+G+ VE+KRT+P+ A  N     +TKKIFVGGIP  +TE+E KD+F+ +G
Sbjct: 74  DKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTVTEDELKDFFAKYG 133

Query: 175 RILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIKKAVPK----R 234
            ++EHQ++ D++T RSRGFGF+ F++E+ V+ + +     ++   QVEIKKA PK    R
Sbjct: 134 NVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQVEIKKAEPKKSLNR 193

Query: 235 FAYDFSSNTAQTSSGYDMYRCGGLYDG------------------------------NKM 294
               + S+    SS       GG Y G                                +
Sbjct: 194 SPPSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPASRYAGGYGYGRGSV 253

Query: 295 GTDFGCYDVYAPYGG--YGG-------NYSSFYGAYGYGF---GYG-------VSMYMNG 338
           G +FG    Y  YGG   GG        YSS +G YG GF   GYG       +     G
Sbjct: 254 GPEFG--GGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRGGEGAYLGYPRGG 313

[Close]

BLAST of ClCG09G000760 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-48
Identity = 118/286 (41.26%), Postives = 161/286 (56.29%), Query Frame = 0


Query: 57  SSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADM 116
           S +GKLF+GG++W+T +E   +YFS +GE+ ++VI+ D+ TGR RGFGFV F DPAVA++
Sbjct: 3   SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62

Query: 117 VLKIDHVIDGRAVEVKRTVPRADMNDKLVS-------------RTKKIFVGGIPPGLTEE 176
           V+   H IDGR VE K+ VPR D N    S             RT+KIFVGG+P  +TE 
Sbjct: 63  VITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTES 122

Query: 177 EFKDYFSSFGRILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIK 236
           +FK YF  FG   +  +M D+ T+R RGFGFIT+++E++VE +      HEL GK VE+K
Sbjct: 123 DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL-KTFHELNGKMVEVK 182

Query: 237 KAVPKRFAYDFSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFY 296
           +AVPK  +   S +       Y + R   L +G   G +       A  GGYG      +
Sbjct: 183 RAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFN------PAAVGGYGLRMDGRF 242

Query: 297 GAYGYGFGYGVSMYMNGRYGLN---GYGIPAAGYGMNGYGKGYEGN 327
              G G   G + Y +G YG+N     G+P    G  G G  Y GN
Sbjct: 243 SPVGAGRS-GFANYSSG-YGMNVNFDQGLPT---GFTG-GTNYNGN 275

[Close]

BLAST of ClCG09G000760 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-48
Identity = 118/286 (41.26%), Postives = 161/286 (56.29%), Query Frame = 0


Query: 57  SSSGKLFVGGVAWETTKETFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTFCDPAVADM 116
           S +GKLF+GG++W+T +E   +YFS +GE+ ++VI+ D+ TGR RGFGFV F DPAVA++
Sbjct: 3   SDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEI 62

Query: 117 VLKIDHVIDGRAVEVKRTVPRADMNDKLVS-------------RTKKIFVGGIPPGLTEE 176
           V+   H IDGR VE K+ VPR D N    S             RT+KIFVGG+P  +TE 
Sbjct: 63  VITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTES 122

Query: 177 EFKDYFSSFGRILEHQIMIDYKTKRSRGFGFITFENEDSVENIFAGDKKHELGGKQVEIK 236
           +FK YF  FG   +  +M D+ T+R RGFGFIT+++E++VE +      HEL GK VE+K
Sbjct: 123 DFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLL-KTFHELNGKMVEVK 182

Query: 237 KAVPKRFAYDFSSNTAQTSSGYDMYRCGGLYDGNKMGTDFGCYDVYAPYGGYGGNYSSFY 296
           +AVPK  +   S +       Y + R   L +G   G +       A  GGYG      +
Sbjct: 183 RAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFN------PAAVGGYGLRMDGRF 242

Query: 297 GAYGYGFGYGVSMYMNGRYGLN---GYGIPAAGYGMNGYGKGYEGN 327
              G G   G + Y +G YG+N     G+P    G  G G  Y GN
Sbjct: 243 SPVGAGRS-GFANYSSG-YGMNVNFDQGLPT---GFTG-GTNYNGN 275

The following BLAST results are available for this feature:

BLAST of ClCG09G000760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898204.1	1.4e-173	89.61	protein gar2-like [Benincasa hispida]	[more]
XP_011659642.1	1.5e-167	86.14	protein gar2 [Cucumis sativus]	[more]
KGN45519.1	1.5e-167	86.14	hypothetical protein Csa_016070 [Cucumis sativus]	[more]
TYK03902.1	1.9e-165	84.21	heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa]	[more]
KAA0059423.1	1.9e-165	84.21	heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo var. makuwa]	[more]

BLAST of ClCG09G000760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.3e-44	40.83	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
O94432	1.5e-40	40.37	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
Q99383	2.1e-39	41.36	Nuclear polyadenylated RNA-binding protein 4 OS=Saccharomyces cerevisiae (strain...	[more]
Q96DH6	2.1e-39	37.18	RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1	[more]
Q9VVE5	2.1e-39	42.98	RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=R...	[more]

BLAST of ClCG09G000760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9M1	7.4e-168	86.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G450760 PE=4 SV=1	[more]
A0A5A7UU27	9.0e-166	84.21	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3BYF2	9.0e-166	84.21	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo var. makuwa OX=119469...	[more]
E5GCB7	2.6e-165	83.92	Heterogeneous nuclear ribonucleoprotein a1 OS=Cucumis melo subsp. melo OX=412675...	[more]
A0A1S3CHA1	2.6e-165	83.92	heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of ClCG09G000760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17640.1	1.2e-77	48.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G40490.1	1.6e-58	47.95	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G13224.2	2.4e-54	40.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	4.4e-48	41.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	4.4e-48	41.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 61..132 e-value: 4.4E-22 score: 89.3 coord: 150..223 e-value: 1.4E-22 score: 91.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 151..220 e-value: 9.6E-18 score: 63.8 coord: 62..119 e-value: 6.1E-13 score: 48.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 60..136 score: 15.732639
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 149..227 score: 18.069229
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 145..225 e-value: 4.5E-24 score: 86.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 58..141 e-value: 2.4E-24 score: 87.4
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 52..325
None	No IPR available	PANTHER	PTHR11176:SF42	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 52..325
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 146..251
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 53..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G000760.1	ClCG09G000760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding