ClCG09G000040 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAATTATGGAAAATTTTGTCGGTGCCGGAGGTGGCGGTGCAGCTACCGGAGACGACTAAGGTGGGGGCGGCTATGGTGGCCGAGAGCGGCACAATCAGCGGACCAATGGAACCGCTGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGTATTAGTTAGCGTTGAGGCTGATTTGTATTGCTACATCCACGACGACAATGACATTGATGGTTATCGTTCATTCTAAGTGGTCGTTCTCGGACGCATTCAAGTAAGTTTGCCGTTTTTAGTGTTACTAGTTTTATGGCCTCGGTTTTGGTGATTTGAGTCTATAATTGGCTTGTGAGAAAGGAAATAGTAGAGGGGAGGAACAGTAAGATCCATTAGTTAAAAATGCGTATGCTCTGTGGAGGAATGGTGCTCCCCTGTAACTATAATTACTGCTGTACTTTCAATTTCTTGTTTGTCTTTTATTCTTATCATTGCCTGTTCTCCTTCATTCTTGAAATGCCTTCAGGAAATCTCACCAGAGCCTAATAGGCAGGACTAGAGGACAAAGTGATGAGACGTGTATTTTTTGTCTGCTTTGGGGAAAACATTTTACTGCTATTTCTTTTCATTTATTACCTTGTTTTCTTGGCACCCAAACAGAGTATTATCTAGTTCTTATCGTTTCTGATCGTCTTTTGTTTCACCATTATTGGCCTGCCTACTTTGGGAAAAGCCACTTTCTATCTTAACAGTGATTCAGTTGCTTTTCTTCTGTTGGAATGCTGACAAATCCACGCTCCTTCGAATATGAACAACGGAATCCGGAAAACCTTCTTCATCCAAGTTTCATGGCTTCGTCTAAAATGAACCCATGAACCCTATCCTTTCTTTCCTCAAAATATTCCCCATTTCATGTTTATCTTCTTCTGGACCTGTTGTGACCCTTCATACAAAAATTTGACCAACTGCCTTTTGCTTAATTGATTTGTCTTTCTTTATTGTTCTTAATGCATCCAATGGCGCCACAGGTCACCGTTATAGTATATTCTTTAAAGGGTAACAAAACAAAGAGTTTGTTGCATTTGTTTGTACTTCGTTATTATTAAAATGAATTGTGTGTTAAAACAAAGTTGGGATTGTGGGGTGTTTTTGAATGAGTTGAAAGTAGTTGAACCCTGTGACTTATGGTGAGTATAGGTACCTTGTTGGAGTTTCAGGGGCTGTCCGCTGCCTATTCTTTGTTGTAGCTGCTAGTTACTGCTTCCAAGCTTGCTAGGAAGTCCCAAGGGTTTAGCACCAAAAGTCAAGCCTGCCTCATTTTCGCTATTGATCTGGTAATTATTTTGTGCTGTAGCTCAGGGAAAGAGTAGCATATTACTCACAAGCTTGCAAGTTAACTATGATGAGGAGAATTGTTAAAGATAATTAGTCATTTGAGTTGATATTTGTTTGGTTGTTAATTTAGATTAATTAGTTATTTGTTATATTTCTTACATAAATAACCACTTTGGAGGTGTTTGGCTCAAGGAGTGACAAAAGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAACTCACTTTTTGTCTTATTGACGTCTTACATCGTGTGCTTACAACTTAACAACTTCCTAAATTTTACAACTCTCTAGATTTCACTGCTCCACTCTTGCCTAAAACGCTCCCATTAGAGTTGTAATAGCTAATAAAAAGCTTTTGAAATCATATTGAAACACATTCTTTTATTCATGAAGAGCTCTCTCAACTTAGAGGTGGACTTCTATTGTTGAGTCCGGAATTTGGTATAATATCTTCTATCTTTCGTTGAATCAATTAATATTTAAATATCTTAGGATTAGGCAGTTGTGTTTGTTTTGCGAGATTAGATAGAAGGGAGAGTATTATTTCAAAATTTGGTTGTGTTGGTTGCAGGCCTTGGGATATGCATTGATGAGTGCTGGATCGGCTGCAGCTGGGATCTCAAATCTGAATCGCACTGGCATTGGACATACAACTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCACATTGCCATCTCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTAACCACTTCTGCCATCCAATACGTTGTCTGGCCCTCCAAAAACTAAACCCCCTCACAAAAAACTTTCTGTCTCTGGGAAACGTACTGTAAAGAATATGGCGTTCTTCTGTTCCTTTTGATTCCATGAAGTGTTCCTTAAATCAAGAGAAACTTATATGGTATATATACATGGGACATCCCGCTGTTTTTAGCTAAGATTGTTCATTTGGATAGCTAATGGTTGTTATATGGTGTACTAACTTTGATCTTGAGAGAATTTTAATAGAGTTTGGTTTGTTTGAAACTCACTTTCTAGTAAAATGTTTTGTAGCTTGAAATTTGAACTTTTAGAACTCAAAATGCACATAATTCATAAAGAAGGGAAAGTTTTGTTGTACAAAGGCCAGGAACCTCATTTGCTCATATTGCCCTTCAACATGAGTTAATGTTGGAAGGTTTAGCTGATAGAGTTAGCCTAGTTTGATGTATGAGATTAGGAAAGAAAAAAAATACTTTTATAGTCCCCGATGTTTTAGGAATAGATGCAATTGGTCTCTAAAATTTCAAATTGGCCATTTTAGTTCGGAATGTTAAGAACCAGGTTTAAAAGGTATTCATCCTACCTTTCTCATTTACTACCATTTTCTTTTATTATTTCTAATTTTGAC TGAATTATGGAAAATTTTGTCGGTGCCGGAGGTGGCGGTGCAGCTACCGGAGACGACTAAGGTGGGGGCGGCTATGGTGGCCGAGAGCGGCACAATCAGCGGACCAATGGAACCGCTGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGCTGATTTGTATTGCTACATCCACGACGACAATGACATTGATGGTTATCGTTCATTCTAAGTGGTCGTTCTCGGACGCATTCAATTGCTTTTCTTCTGTTGGAATGCTGACAAATCCACGCTCCTTCGAATATGAACAACGGAATCCGGAAAACCTTCTTCATCCAAGTTTCATGCTGCTAGTTACTGCTTCCAAGCTTGCTAGGAAGTCCCAAGGGTTTAGCACCAAAAGTCAAGCCTGCCTCATTTTCGCTATTGATCTGGGAAAGAGTAGCATATTACTCACAAGCTTGCAAGCCTTGGGATATGCATTGATGAGTGCTGGATCGGCTGCAGCTGGGATCTCAAATCTGAATCGCACTGGCATTGGACATACAACTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCACATTGCCATCTCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTAACCACTTCTGCCATCCAATACGTTGTCTGGCCCTCCAAAAACTAAACCCCCTCACAAAAAACTTTCTGTCTCTGGGAAACGTACTGTAAAGAATATGGCGTTCTTCTGTTCCTTTTGATTCCATGAAGTGTTCCTTAAATCAAGAGAAACTTATATGGTATATATACATGGGACATCCCGCTGTTTTTAGCTAAGATTGTTCATTTGGATAGCTAATGGTTGTTATATGGTGTACTAACTTTGATCTTGAGAGAATTTTAATAGAGTTTGGTTTGTTTGAAACTCACTTTCTAGTAAAATGTTTTGTAGCTTGAAATTTGAACTTTTAGAACTCAAAATGCACATAATTCATAAAGAAGGGAAAGTTTTGTTGTACAAAGGCCAGGAACCTCATTTGCTCATATTGCCCTTCAACATGAGTTAATGTTGGAAGGTTTAGCTGATAGAGTTAGCCTAGTTTGATGTATGAGATTAGGAAAGAAAAAAAATACTTTTATAGTCCCCGATGTTTTAGGAATAGATGCAATTGGTCTCTAAAATTTCAAATTGGCCATTTTAGTTCGGAATGTTAAGAACCAGGTTTAAAAGGTATTCATCCTACCTTTCTCATTTACTACCATTTTCTTTTATTATTTCTAATTTTGAC ATGGTGGCCGAGAGCGGCACAATCAGCGGACCAATGGAACCGCTGGAGCGAAGCTTCGACCGTCTGAGAGCCGATTTGCTGATTTGTATTGCTACATCCACGACGACAATGACATTGATGGTTATCGTTCATTCTAAGTGGTCGTTCTCGGACGCATTCAATTGCTTTTCTTCTGTTGGAATGCTGACAAATCCACGCTCCTTCGAATATGAACAACGGAATCCGGAAAACCTTCTTCATCCAAGTTTCATGCTGCTAGTTACTGCTTCCAAGCTTGCTAGGAAGTCCCAAGGGTTTAGCACCAAAAGTCAAGCCTGCCTCATTTTCGCTATTGATCTGGGAAAGAGTAGCATATTACTCACAAGCTTGCAAGCCTTGGGATATGCATTGATGAGTGCTGGATCGGCTGCAGCTGGGATCTCAAATCTGAATCGCACTGGCATTGGACATACAACTCTGCCTAACTTCTGTAAGCCATTACAACGCTTCTGTAACCACATTGCCATCTCTATTGCCTTCACATTCTTTACCTGCTGCTTGCTAACCACTTCTGCCATCCAATACGTTGTCTGGCCCTCCAAAAACTAA MVAESGTISGPMEPLERSFDRLRADLLICIATSTTTMTLMVIVHSKWSFSDAFNCFSSVGMLTNPRSFEYEQRNPENLLHPSFMLLVTASKLARKSQGFSTKSQACLIFAIDLGKSSILLTSLQALGYALMSAGSAAAGISNLNRTGIGHTTLPNFCKPLQRFCNHIAISIAFTFFTCCLLTTSAIQYVVWPSKN Homology
BLAST of ClCG09G000040 vs. NCBI nr
Match: XP_038899301.1 (CASP-like protein 3A1 [Benincasa hispida]) HSP 1 Score: 211.5 bits (537), Expect = 6.7e-51 Identity = 131/215 (60.93%), Postives = 137/215 (63.72%), Query Frame = 0
BLAST of ClCG09G000040 vs. NCBI nr
Match: XP_011659686.1 (CASP-like protein 3A1 [Cucumis sativus] >KGN45596.1 hypothetical protein Csa_016220 [Cucumis sativus]) HSP 1 Score: 209.9 bits (533), Expect = 1.9e-50 Identity = 127/214 (59.35%), Postives = 137/214 (64.02%), Query Frame = 0
BLAST of ClCG09G000040 vs. NCBI nr
Match: KAG7025825.1 (CASP-like protein 3A1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.1 bits (531), Expect = 3.3e-50 Identity = 125/216 (57.87%), Postives = 136/216 (62.96%), Query Frame = 0
BLAST of ClCG09G000040 vs. NCBI nr
Match: XP_022964006.1 (CASP-like protein 3A1 [Cucurbita moschata]) HSP 1 Score: 207.2 bits (526), Expect = 1.3e-49 Identity = 124/216 (57.41%), Postives = 135/216 (62.50%), Query Frame = 0
BLAST of ClCG09G000040 vs. NCBI nr
Match: XP_023000388.1 (CASP-like protein 3A1 [Cucurbita maxima]) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49 Identity = 123/216 (56.94%), Postives = 136/216 (62.96%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy Swiss-Prot
Match: A7P756 (CASP-like protein 3A1 OS=Vitis vinifera OX=29760 GN=VIT_09s0002g03780 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 9.4e-32 Identity = 88/216 (40.74%), Postives = 116/216 (53.70%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy Swiss-Prot
Match: B9RQG7 (CASP-like protein 3A1 OS=Ricinus communis OX=3988 GN=RCOM_1491260 PE=2 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 8.8e-30 Identity = 84/212 (39.62%), Postives = 109/212 (51.42%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy Swiss-Prot
Match: B9GXD6 (CASP-like protein 3A1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_553757 PE=3 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 4.4e-29 Identity = 85/219 (38.81%), Postives = 112/219 (51.14%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy Swiss-Prot
Match: B9GGL4 (CASP-like protein 3A2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_751837 PE=2 SV=2) HSP 1 Score: 128.6 bits (322), Expect = 7.5e-29 Identity = 80/212 (37.74%), Postives = 112/212 (52.83%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy Swiss-Prot
Match: A9NN43 (CASP-like protein 3A1 OS=Picea sitchensis OX=3332 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.3e-20 Identity = 69/217 (31.80%), Postives = 100/217 (46.08%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy TrEMBL
Match: A0A0A0KCU6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G453000 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 9.4e-51 Identity = 127/214 (59.35%), Postives = 137/214 (64.02%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy TrEMBL
Match: A0A6J1HHN1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111464155 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 6.1e-50 Identity = 124/216 (57.41%), Postives = 135/216 (62.50%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy TrEMBL
Match: A0A6J1KMH1 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494645 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 8.0e-50 Identity = 123/216 (56.94%), Postives = 136/216 (62.96%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy TrEMBL
Match: A0A5A7U5A3 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00190 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 4.0e-49 Identity = 124/216 (57.41%), Postives = 137/216 (63.43%), Query Frame = 0
BLAST of ClCG09G000040 vs. ExPASy TrEMBL
Match: A0A1S3CGY3 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103500792 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 4.0e-49 Identity = 124/216 (57.41%), Postives = 137/216 (63.43%), Query Frame = 0
BLAST of ClCG09G000040 vs. TAIR 10
Match: AT3G16300.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19 Identity = 63/183 (34.43%), Postives = 91/183 (49.73%), Query Frame = 0
BLAST of ClCG09G000040 vs. TAIR 10
Match: AT1G79780.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13 Identity = 55/172 (31.98%), Postives = 79/172 (45.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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