ClCG08G017890 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G017890
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	axial regulator YABBY 4-like
Location	CG_Chr08: 29943203 .. 29944994 (+)
RNA-Seq Expression	ClCG08G017890
Synteny	ClCG08G017890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTCTCTCTCTCTCTCTCTTAACTGTAAAAGGTGTTGATATGTCGACAGTGGAGCAACTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAGATCACACGTATTTGTATAACACAACACACAAAACTAAAACAAGCTAATTAAGCAGTAATTAAATTAGTGATAATGCATAATTTGGTTTTGTTTGGATGATGATTTCAAATTGTTGAATAATGAAGTAATATTAAGCACGCACAGGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCTCATAATTTGGTACCTAACGCTCCTAAATTTACTCTTTCTCTCATCATCTATCTCTCTAAATTTAATTTTGAATTGGGTTTAAATTATTATTATTATTATTATTATTATTATTATTATATATGTTTTTGTGACAGCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCGTAAGCCACCATCTGTATAATAAGTTAATTATTATGCCTTTAAATTCTTTTCTTATTATTGTACGTAACATTTGTTATTCTCTTTTAAATTAGCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGTAAGATAAATATTTGCTATTAGTATTAACTGTGCACGTAAGAGATGAGAGGTGTTTAGAAAAGGGTTGGGAGGCTGAATTGGTTTCATGCAAATATTATATTATATTGTGCAGGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATGTAAGCTTTGTGTTGTTCCATAAATGATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAGAGAGTAGAGAGTAGAGAGAATTACATTGTTAGCTTAAACATATATATTGTGGTTGAGGGTTTGCAGTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATGTAGGCAGCCAAAGGGGGAGCGTGATTTTAAATTTAACTTAATCAGGTAATTATTATTAAATCAAATTAAGGTACCTAGCTCATTGATTAAACATATATTATATATGAGTAGACAAAACATTAAATGTTGAGTAATAAATTTGATAGAGTAAATTATATGGGATTGGCAAGTATTTCCGTAAAAGAAGTAAGGGATGGTAATTGAGCCAACGACCACATCCAAGTCCATTTTCCTGAAATGGGATCACACTTAAATACACAATTTATGAATAATTACTTCTATTCTCTCTGTTTACAGTAATTGAATGGATGCCACTGAGATTGAGATTGTCTTCTCTCTCCAACACCCCCTTTTCACCAAAACTAATTCAAACCCTCTCAATAATAATATGCCTTTTTTTTTCTTCTTATTTATATTTTTGGTTTCAGAGAGGTCAAAGTCTGCTTCTTAAAACTCCCCTACTGCCTGCTTTGGATCTGCGCCCAAACGACAATGAAACATATTAATTCCATCCTGACACAAATACACCAACACCTTTTTCTTTTCTTTTCTTTTCT

mRNA sequence

CTCTCTCTCTCTCTCTCTCTTAACTGTAAAAGGTGTTGATATGTCGACAGTGGAGCAACTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCTCATAATTTGCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATGTAGGCAGCCAAAGGGGGAGCGTGATTTTAAATTTAACTTAATCAGAGAGGTCAAAGTCTGCTTCTTAAAACTCCCCTACTGCCTGCTTTGGATCTGCGCCCAAACGACAATGAAACATATTAATTCCATCCTGACACAAATACACCAACACCTTTTTCTTTTCTTTTCTTTTCT

Coding sequence (CDS)

ATGTCGACAGTGGAGCAACTCCTGGCCGATTCCTCTGAACAGATTCGTTATGTGCAATGTGGTCTTTGTAGCACCATATTGTTGGTAAATGTGCCCTACAGCAACTTGTCGATGGTGGTGAGCGTAAGATGTGGGAACTGCAGTGGCCTCCTCTCTGTCAACATGGCTAAGCCCTCTTTTATCCCTTTCGATCTTCTTACTTCCCTCTCTCATAATTTGCCAAAGGAACCTTTCGCCCAAGAGTTTAACGTCGGCCAGAAACACTACTGCTTGGACAGCCTCAGCAACACATCCGACCTCATAACCTCCTACCATAACATTATTCACAATCATGAAGATGATGATGATGTCATCATTATTCCTCCCACTCCAGTTGTTAACAAGCCCCCGGAGAAGAAACAGCGAGCCCCATCAGCTTATAACCAATTCATCAAGGAAGAGATTCGGAGGCTGAAGGCGGAGAATCCAGCAATGGCTCATAAAGAGGCATTCAAGACAGCTGCAAAAAATTGGGCTCATCTTCCTCCAGTCAATGCCGCAGCTGGAGTTGATCACATGACGATGAGAAAGAAAAACGTAATGTAG

Protein sequence

MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHMTMRKKNVM

Homology

[Close]

BLAST of ClCG08G017890 vs. NCBI nr
Match: KAA0061079.1 (axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 348.6 bits (893), Expect = 3.5e-92
Identity = 182/197 (92.39%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNT---SDLITSYHNIIHNHEDDDDV 120
           IPFDLLTSLSHNLPKE F QEFNV QKHYCLDSLSNT   SDL+TSYHNII NHE DDDV
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNV-QKHYCLDSLSNTSSSSDLLTSYHNIIQNHE-DDDV 120

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV
Sbjct: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180

Query: 181 NAAAGVDHMTMRKKNVM 195
           N A G DHM +RKKNVM
Sbjct: 181 N-AEGADHMMLRKKNVM 194

[Close]

BLAST of ClCG08G017890 vs. NCBI nr
Match: KAE8652041.1 (hypothetical protein Csa_018647 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 181/197 (91.88%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSF
Sbjct: 159 MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 218

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSN---TSDLITSYHNIIHNHEDDDDV 120
           IPFDLLTSLSHNLPKE F QEFNV QKHYCLDSLSN   +SDL+TSYHNII NHE DDDV
Sbjct: 219 IPFDLLTSLSHNLPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLTSYHNIIQNHE-DDDV 278

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV
Sbjct: 279 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 338

Query: 181 NAAAGVDHMTMRKKNVM 195
           N A G DHM +RKKNVM
Sbjct: 339 N-AEGADHMMLRKKNVM 352

[Close]

BLAST of ClCG08G017890 vs. NCBI nr
Match: XP_004143066.2 (axial regulator YABBY 4 [Cucumis sativus])

HSP 1 Score: 347.1 bits (889), Expect = 1.0e-91
Identity = 181/197 (91.88%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSN---TSDLITSYHNIIHNHEDDDDV 120
           IPFDLLTSLSHNLPKE F QEFNV QKHYCLDSLSN   +SDL+TSYHNII NHE DDDV
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLTSYHNIIQNHE-DDDV 120

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV
Sbjct: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180

Query: 181 NAAAGVDHMTMRKKNVM 195
           N A G DHM +RKKNVM
Sbjct: 181 N-AEGADHMMLRKKNVM 194

[Close]

BLAST of ClCG08G017890 vs. NCBI nr
Match: XP_038886536.1 (axial regulator YABBY 4-like [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 2.3e-88
Identity = 172/195 (88.21%), Postives = 178/195 (91.28%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQL  DSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKP+F
Sbjct: 1   MSTVEQLQGDSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPTF 60

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVIII 120
           IPFDLLTSLSHNLPKE   QEFN+ QKHYCLDSLSNTSDL+TSYHNII NHEDDD  II 
Sbjct: 61  IPFDLLTSLSHNLPKEGLGQEFNL-QKHYCLDSLSNTSDLVTSYHNIIQNHEDDDVSIIP 120

Query: 121 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA- 180
           P TPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 
Sbjct: 121 PTTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAQ 180

Query: 181 AAGVDHMTMRKKNVM 195
             G  +M MRK+NVM
Sbjct: 181 GQGAGYMMMRKRNVM 194

[Close]

BLAST of ClCG08G017890 vs. NCBI nr
Match: XP_022997624.1 (axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator YABBY 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.5 bits (815), Expect = 3.9e-83
Identity = 165/191 (86.39%), Postives = 173/191 (90.58%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFI 61
           ST+EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSFI
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHE-DDDDVIII 121
           PFDLLTSLSHNLPKEPF Q+ NV QKH CLD+L+NTSDL+TSYHNII NHE DDDD III
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNV-QKHLCLDNLNNTSDLLTSYHNIIQNHEDDDDDAIII 122

Query: 122 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAA 181
           PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN  
Sbjct: 123 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGE 182

Query: 182 AGVDHMTMRKK 192
              DH+   +K
Sbjct: 183 G--DHVGSGRK 189

[Close]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot
Match: Q9LDT3 (Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 4.5e-42
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           M+T    L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+C+ LLSVN+ K SF
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASF 66

Query: 61  IPFDLLTSLSH--NLPKEPFAQEFNVGQKHYCLDSLSNTS--DLITSYHNIIHNHEDDDD 120
           IP  LL SLSH     KE  A    V ++ + ++     S   L++S  N      +D+D
Sbjct: 67  IPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDN------EDED 126

Query: 121 VIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP 180
           V  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH PP
Sbjct: 127 VSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPP 186

Query: 181 V-NAAAGVDHMTMRKKN 193
             N  A  D     + N
Sbjct: 187 AHNKRAASDQCFCEEDN 195

[Close]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot
Match: O22152 (Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.0e-31
Identity = 77/187 (41.18%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 12  SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAK---PSFIPFDLLTS 71
           S+ + YVQC  C TIL VNVPY++L   V+VRCG C+ LLSVNM     P+     L   
Sbjct: 22  SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLG 81

Query: 72  LSHNLPKEPFAQEFNVGQKHYCLDSLSN--TSDLITSYHNIIHNHEDDDDVIIIPPTPVV 131
                  +   +E      +  +  ++   T + I S+ ++   HE       IP  P V
Sbjct: 82  PHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE-------IPKAPPV 141

Query: 132 NKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHM 191
           N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++     D+ 
Sbjct: 142 NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQ 201

Query: 192 TMRKKNV 194
            ++K N+
Sbjct: 202 PVKKTNM 201

[Close]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot
Match: Q9XFB1 (Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-30
Identity = 78/196 (39.80%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           S++Q+ YV C  C T+L V+VP S+L   V+VRCG+CS LLSV ++  + +    +++L 
Sbjct: 21  STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLG 80

Query: 71  HN-LPKEP------FAQEFNVGQKHYCLDSLSNTSDLITSYHNIIH------NHEDDDDV 130
           H+ LP  P        +E   G ++  ++ +   S   +++H   H      N    D +
Sbjct: 81  HSFLPPPPPPPPPNLLEEMRSGGQNINMNMM--MSHHASAHHPNEHLVMATRNGRSVDHL 140

Query: 131 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 190
             +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P +
Sbjct: 141 QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 200

Query: 191 NAAAGVDHMTMRKKNV 194
           +     DH   +K NV
Sbjct: 201 HFGLMADHPPTKKANV 213

[Close]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-28
Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           SSE++ YV C  C+TIL V+VPY++L  +V+VRCG+C+ LLS+N+            SL 
Sbjct: 6   SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIG----------VSL- 65

Query: 71  HNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHED-DDDVIIIPPTPVVNKP 130
           H     P  Q+    ++H    SL    D  +S  +  +  E+ D +   +PP     +P
Sbjct: 66  HQTSAPPIHQDLQPHRQH--TTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI----RP 125

Query: 131 PEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVD 185
           PEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++    +D
Sbjct: 126 PEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLD 163

[Close]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 77/168 (45.83%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           ++EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+C+ L SVNMA         L SLS
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA-------ALQSLS 66

Query: 71  HNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVIIIPPTPVVNKPP 130
                 P  Q  N     Y   S S+T   I S  +             I    +VN+PP
Sbjct: 67  -----RPNFQATNYAVPEYGSSSRSHTK--IPSRIS----------TRTITEQRIVNRPP 126

Query: 131 EKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 179
           EK+QR PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 EKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

[Close]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL
Match: A0A5A7V5T8 (Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002190 PE=3 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.7e-92
Identity = 182/197 (92.39%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNT---SDLITSYHNIIHNHEDDDDV 120
           IPFDLLTSLSHNLPKE F QEFNV QKHYCLDSLSNT   SDL+TSYHNII NHE DDDV
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNV-QKHYCLDSLSNTSSSSDLLTSYHNIIQNHE-DDDV 120

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV
Sbjct: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180

Query: 181 NAAAGVDHMTMRKKNVM 195
           N A G DHM +RKKNVM
Sbjct: 181 N-AEGADHMMLRKKNVM 194

[Close]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL
Match: A0A0A0LK60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 4.9e-92
Identity = 181/197 (91.88%), Postives = 185/197 (93.91%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSF
Sbjct: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCAGLLSVNMAKPSF 60

Query: 61  IPFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSN---TSDLITSYHNIIHNHEDDDDV 120
           IPFDLLTSLSHNLPKE F QEFNV QKHYCLDSLSN   +SDL+TSYHNII NHE DDDV
Sbjct: 61  IPFDLLTSLSHNLPKEGFGQEFNV-QKHYCLDSLSNSSSSSDLLTSYHNIIQNHE-DDDV 120

Query: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180
           IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV
Sbjct: 121 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 180

Query: 181 NAAAGVDHMTMRKKNVM 195
           N A G DHM +RKKNVM
Sbjct: 181 N-AEGADHMMLRKKNVM 194

[Close]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL
Match: A0A6J1KC10 (axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.9e-83
Identity = 165/191 (86.39%), Postives = 173/191 (90.58%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFI 61
           ST+EQLL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSFI
Sbjct: 3   STLEQLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHE-DDDDVIII 121
           PFDLLTSLSHNLPKEPF Q+ NV QKH CLD+L+NTSDL+TSYHNII NHE DDDD III
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNV-QKHLCLDNLNNTSDLLTSYHNIIQNHEDDDDDAIII 122

Query: 122 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAA 181
           PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN  
Sbjct: 123 PPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNGE 182

Query: 182 AGVDHMTMRKK 192
              DH+   +K
Sbjct: 183 G--DHVGSGRK 189

[Close]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL
Match: A0A6J1HCV6 (axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.8e-81
Identity = 162/192 (84.38%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 2   STVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFI 61
           ST+E LL D SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMAKPSFI
Sbjct: 3   STLEHLLPDPSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAKPSFI 62

Query: 62  PFDLLTSLSHNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHE--DDDDVII 121
           PFDLLTSLSHNLPKEPF Q+ NV QKH CLD+ +N SDL+TSYHNII NHE  DDDD II
Sbjct: 63  PFDLLTSLSHNLPKEPF-QDLNV-QKHLCLDNRNNASDLLTSYHNIIQNHEDDDDDDAII 122

Query: 122 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNA 181
           IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENP MAHKEAFKTAAKNWAHLPPVN 
Sbjct: 123 IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPGMAHKEAFKTAAKNWAHLPPVNG 182

Query: 182 AAGVDHMTMRKK 192
               DH+   +K
Sbjct: 183 EG--DHVGSGRK 190

[Close]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL
Match: A0A6J1BTL6 (axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 2.1e-71
Identity = 154/196 (78.57%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           MSTVE LL DSSE+IRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNC+GLLSVNMA PSF
Sbjct: 1   MSTVEDLL-DSSEEIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCTGLLSVNMAMPSF 60

Query: 61  IPFDLLTSLSHNLPKE-PFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVII 120
           IPFDLLTSLSHNLPK+  F Q+F++          + TSDLI S HNII +HEDD D+II
Sbjct: 61  IPFDLLTSLSHNLPKQLAFGQDFDLN---------NVTSDLIASNHNIIQDHEDDPDLII 120

Query: 121 -IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 180
            IPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP  
Sbjct: 121 NIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP-- 180

Query: 181 AAAGVDHMTMRKKNVM 195
            A G +   MRKK V+
Sbjct: 181 -AHGEEGDQMRKKIVV 183

[Close]

BLAST of ClCG08G017890 vs. TAIR 10
Match: AT1G23420.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 172.6 bits (436), Expect = 3.2e-43
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MSTVEQLLADSSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSF 60
           M+T    L D   QI +VQCG C+TILLV+VP+++LSMVV+VRCG+C+ LLSVN+ K SF
Sbjct: 7   MTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASF 66

Query: 61  IPFDLLTSLSH--NLPKEPFAQEFNVGQKHYCLDSLSNTS--DLITSYHNIIHNHEDDDD 120
           IP  LL SLSH     KE  A    V ++ + ++     S   L++S  N      +D+D
Sbjct: 67  IPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDN------EDED 126

Query: 121 VIIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPP 180
           V  +    VVNKPPEK+QRAPSAYN FIKEEIRRLKA+NP+MAHKEAF  AAKNWAH PP
Sbjct: 127 VSRV--YQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPP 186

Query: 181 V-NAAAGVDHMTMRKKN 193
             N  A  D     + N
Sbjct: 187 AHNKRAASDQCFCEEDN 195

[Close]

BLAST of ClCG08G017890 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 135.2 bits (339), Expect = 5.7e-32
Identity = 77/187 (41.18%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 12  SEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAK---PSFIPFDLLTS 71
           S+ + YVQC  C TIL VNVPY++L   V+VRCG C+ LLSVNM     P+     L   
Sbjct: 22  SDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLG 81

Query: 72  LSHNLPKEPFAQEFNVGQKHYCLDSLSN--TSDLITSYHNIIHNHEDDDDVIIIPPTPVV 131
                  +   +E      +  +  ++   T + I S+ ++   HE       IP  P V
Sbjct: 82  PHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHE-------IPKAPPV 141

Query: 132 NKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVDHM 191
           N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P ++     D+ 
Sbjct: 142 NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQ 201

Query: 192 TMRKKNV 194
            ++K N+
Sbjct: 202 PVKKTNM 201

[Close]

BLAST of ClCG08G017890 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-31
Identity = 78/196 (39.80%), Postives = 116/196 (59.18%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           S++Q+ YV C  C T+L V+VP S+L   V+VRCG+CS LLSV ++  + +    +++L 
Sbjct: 21  STDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALL-LPSVSNLG 80

Query: 71  HN-LPKEP------FAQEFNVGQKHYCLDSLSNTSDLITSYHNIIH------NHEDDDDV 130
           H+ LP  P        +E   G ++  ++ +   S   +++H   H      N    D +
Sbjct: 81  HSFLPPPPPPPPPNLLEEMRSGGQNINMNMM--MSHHASAHHPNEHLVMATRNGRSVDHL 140

Query: 131 IIIPPTPVVNKPPEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPV 190
             +P  P  N+PPEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF  AAKNWAH P +
Sbjct: 141 QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 200

Query: 191 NAAAGVDHMTMRKKNV 194
           +     DH   +K NV
Sbjct: 201 HFGLMADHPPTKKANV 213

[Close]

BLAST of ClCG08G017890 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29
Identity = 75/175 (42.86%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           SSE++ YV C  C+TIL V+VPY++L  +V+VRCG+C+ LLS+N+            SL 
Sbjct: 6   SSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIG----------VSL- 65

Query: 71  HNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHED-DDDVIIIPPTPVVNKP 130
           H     P  Q+    ++H    SL    D  +S  +  +  E+ D +   +PP     +P
Sbjct: 66  HQTSAPPIHQDLQPHRQH--TTSLVTRKDCASSSRSTNNLSENIDREAPRMPPI----RP 125

Query: 131 PEKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVNAAAGVD 185
           PEK+QR PSAYN+FIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++    +D
Sbjct: 126 PEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLD 163

[Close]

BLAST of ClCG08G017890 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.0e-28
Identity = 77/168 (45.83%), Postives = 99/168 (58.93%), Query Frame = 0


Query: 11  SSEQIRYVQCGLCSTILLVNVPYSNLSMVVSVRCGNCSGLLSVNMAKPSFIPFDLLTSLS 70
           ++EQ+ Y+ C  C+ IL VNVP S+L  +V+VRCG+C+ L SVNMA         L SLS
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAA-------ALQSLS 66

Query: 71  HNLPKEPFAQEFNVGQKHYCLDSLSNTSDLITSYHNIIHNHEDDDDVIIIPPTPVVNKPP 130
                 P  Q  N     Y   S S+T   I S  +             I    +VN+PP
Sbjct: 67  -----RPNFQATNYAVPEYGSSSRSHTK--IPSRIS----------TRTITEQRIVNRPP 126

Query: 131 EKKQRAPSAYNQFIKEEIRRLKAENPAMAHKEAFKTAAKNWAHLPPVN 179
           EK+QR PSAYNQFIKEEI+R+KA NP ++H+EAF TAAKNWAH P ++
Sbjct: 127 EKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 150

The following BLAST results are available for this feature:

BLAST of ClCG08G017890 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061079.1	3.5e-92	92.39	axial regulator YABBY 4 isoform X2 [Cucumis melo var. makuwa]	[more]
KAE8652041.1	1.0e-91	91.88	hypothetical protein Csa_018647 [Cucumis sativus]	[more]
XP_004143066.2	1.0e-91	91.88	axial regulator YABBY 4 [Cucumis sativus]	[more]
XP_038886536.1	2.3e-88	88.21	axial regulator YABBY 4-like [Benincasa hispida]	[more]
XP_022997624.1	3.9e-83	86.39	axial regulator YABBY 4-like [Cucurbita maxima] >XP_023545650.1 axial regulator ...	[more]

BLAST of ClCG08G017890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDT3	4.5e-42	52.79	Axial regulator YABBY 4 OS=Arabidopsis thaliana OX=3702 GN=YAB4 PE=1 SV=2	[more]
O22152	8.0e-31	41.18	Axial regulator YABBY 1 OS=Arabidopsis thaliana OX=3702 GN=YAB1 PE=1 SV=1	[more]
Q9XFB1	5.2e-30	39.80	Axial regulator YABBY 3 OS=Arabidopsis thaliana OX=3702 GN=YAB3 PE=1 SV=1	[more]
Q9XFB0	6.3e-28	42.86	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q8GW46	1.4e-27	45.83	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]

BLAST of ClCG08G017890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5T8	1.7e-92	92.39	Axial regulator YABBY 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A0A0LK60	4.9e-92	91.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G348870 PE=3 SV=1	[more]
A0A6J1KC10	1.9e-83	86.39	axial regulator YABBY 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492500 PE=3 SV...	[more]
A0A6J1HCV6	1.8e-81	84.38	axial regulator YABBY 4-like OS=Cucurbita moschata OX=3662 GN=LOC111462354 PE=3 ...	[more]
A0A6J1BTL6	2.1e-71	78.57	axial regulator YABBY 4-like OS=Momordica charantia OX=3673 GN=LOC111005217 PE=3...	[more]

BLAST of ClCG08G017890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23420.1	3.2e-43	52.79	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	5.7e-32	41.18	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	3.7e-31	39.80	Plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	4.5e-29	42.86	Plant-specific transcription factor YABBY family protein	[more]
AT2G26580.1	1.0e-28	45.83	plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 124..186 e-value: 1.5E-8 score: 36.8
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 124..176
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 11..178 e-value: 3.3E-54 score: 183.9
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..189
None	No IPR available	PANTHER	PTHR31675:SF8	AXIAL REGULATOR YABBY 4	coord: 1..189
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 135..176 e-value: 6.56811E-6 score: 40.3038

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G017890.1	ClCG08G017890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045165	cell fate commitment
biological_process	GO:0048481	plant ovule development
biological_process	GO:0009944	polarity specification of adaxial/abaxial axis
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus