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ClCG08G016170 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCAATCCCAGGTAATAATAACTCTATTCATGCTTCCCCCAATTCGTATTCGTGTTTCAAATTTTTAAATTTTTTATGAAAAGTTTTAAGTGTATTTTTGAAAAAGTATTTTTTAACGCAGAATACAATACAAAGGTTAGTGGTATTTGGTATAATTTAGTTTTTTCTTTTGCTTATAATCCGGGACGGCTCTGTTTGTGAAGGGGTCGGAGAAGCTAAATGAAGAAGGAGCCATTGAGACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCTGGAGCCCACAAACGAACGCACCACGGTGGTTCATCTAACCAGAAAACAAGCCCATGGCAGCGGAGTTACGGGGAGTGCAGCCGCGGCTGTGGGTAACGCCCTTGGTTCGGCCAGGGATGCCGTTTTTGGGAAGGGGAAAGACAGCCAACCACGGCGCTGA ATGCACCAATCCCAGGGGTCGGAGAAGCTAAATGAAGAAGGAGCCATTGAGACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCTGGAGCCCACAAACGAACGCACCACGGTGGTTCATCTAACCAGAAAACAAGCCCATGGCAGCGGAGTTACGGGGAGTGCAGCCGCGGCTGTGGGTAACGCCCTTGGTTCGGCCAGGGATGCCGTTTTTGGGAAGGGGAAAGACAGCCAACCACGGCGCTGA ATGCACCAATCCCAGGGGTCGGAGAAGCTAAATGAAGAAGGAGCCATTGAGACGAAGGTTGACACAATCGATCAGCGTTCACCGCCGGGGCAGAACCAGCTGGAGCCCACAAACGAACGCACCACGGTGGTTCATCTAACCAGAAAACAAGCCCATGGCAGCGGAGTTACGGGGAGTGCAGCCGCGGCTGTGGGTAACGCCCTTGGTTCGGCCAGGGATGCCGTTTTTGGGAAGGGGAAAGACAGCCAACCACGGCGCTGA MHQSQGSEKLNEEGAIETKVDTIDQRSPPGQNQLEPTNERTTVVHLTRKQAHGSGVTGSAAAAVGNALGSARDAVFGKGKDSQPRR Homology
BLAST of ClCG08G016170 vs. NCBI nr
Match: KAG6585682.1 (hypothetical protein SDJN03_18415, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020595.1 hypothetical protein SDJN02_17281 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.5 bits (288), Expect = 2.2e-22 Identity = 62/84 (73.81%), Postives = 73/84 (86.90%), Query Frame = 0
BLAST of ClCG08G016170 vs. NCBI nr
Match: KAA0060924.1 (hypothetical protein E6C27_scaffold501G00570 [Cucumis melo var. makuwa]) HSP 1 Score: 84.0 bits (206), Expect = 7.1e-13 Identity = 58/85 (68.24%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of ClCG08G016170 vs. NCBI nr
Match: KAE8652073.1 (hypothetical protein Csa_018632 [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 3.5e-12 Identity = 56/85 (65.88%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of ClCG08G016170 vs. NCBI nr
Match: KDP41684.1 (hypothetical protein JCGZ_16091 [Jatropha curcas]) HSP 1 Score: 77.4 bits (189), Expect = 6.7e-11 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of ClCG08G016170 vs. NCBI nr
Match: KAB1220313.1 (hypothetical protein CJ030_MR3G019059 [Morella rubra]) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-10 Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of ClCG08G016170 vs. ExPASy TrEMBL
Match: A0A5A7V0S3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00570 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.4e-13 Identity = 58/85 (68.24%), Postives = 61/85 (71.76%), Query Frame = 0
BLAST of ClCG08G016170 vs. ExPASy TrEMBL
Match: A0A0A0LR80 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G356060 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 8.5e-12 Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of ClCG08G016170 vs. ExPASy TrEMBL
Match: A0A067LC75 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16091 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 3.2e-11 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of ClCG08G016170 vs. ExPASy TrEMBL
Match: A0A6A1W5Z9 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G019059 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 9.4e-11 Identity = 45/85 (52.94%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of ClCG08G016170 vs. ExPASy TrEMBL
Match: A0A2P5EGM5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_195170 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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