ClCG08G015940 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G015940
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Thioredoxin domain-containing protein
Location	CG_Chr08: 28349475 .. 28351691 (+)
RNA-Seq Expression	ClCG08G015940
Synteny	ClCG08G015940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACCACCCACGTGAAAGAAAATCAATGGCAAACGAAGGAAGAAGATAATGGTGGCGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCGGAGGTAACCCACTGGTCCTTCATTTGTTTCTTTCCCTAATAAATATTTACACTCCTCATTCTTTTAACAGTTATTTTTCACCCTCTTTCTGAATCGATAATCGAAATTGTTTCCTCCTTTAACGTGATTAATGTTGAAAACGATTTATGGGTTTGAAATGCTGCAACGAATGCTACATCTGAATCTGATATATTGCTCAGTTTTATTAGCTTTCTGGTTGAAGTTCATTCACTAAAAAAGACCCAAATCGGAGTTTTTGGGTATATATGCATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAGCTTTAATCAGTTCTGGATTAAACCCAAATGAAGAAGTGGAATCGAGATTCCCCATTTCAATTCCCTGCTGGTTGTCGTCGGAGAAAGGACAGGTTCGATTGTCGATTACAAGACCCGAAGTTCGGAGACACCAATTGTTGTTCAAGAGTAAAATCAGAGTTGGTGCTGGAAATCAGGAGGAGTTGTTTGATGAAGATGATGATCTTTGTCCTGTAGACTGTGTGAGGGAATTCAAGACGGACGAAGAGTTCCTTAAAATTCTAGACAGAAGGAAAACGGTGCTTTGGTGGTTGTGGACTTTTATCGAACATCTTGTGGGAGTTGCAAATATATAGAACAAGGGTTTGCAAAACTGTGCAAGGGGTCTGGTGATCAAGAAGCACCGGTTATCTTCTTGAAGCATAATGTGAGTGTTTATATAAGCCAAGTTTTCTTGGGAAATGACTTCCATTCCACCGCTGAATGATGATTATGATTTGAATGTGATTGTGGTTTCAGGTCATGGATGAATATGATGAGCAATCTGAGGTTGCTGAACGACTAAGGATCAGGGTAAGCTTCTTTTCTCTTCTTGATTGCCATTTTGGGTGGTGTTGAATTGAACTGAAGTTTTGATTTCTGAACTGGTTTTGGTCTCTTGAGGAACTTTTATTGGTTTCGAGAGATTACATCTTTTAGAATAATTTCATCATTGATTTCACATGCATTACCTTTCCCCTCCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTCAAACCGCCTCCAATTCTGCATGCCGCTCCTCCTCCAAATGCGTGGAGGAATATGAATGTAATCGTCATGGATCGGCCGGACTTGATCTAGCGATCGTAGATTAGAATAGAGTCAGCAATCATCGCGTCGCTTGGAGATCGCCAAATCTAGGCCTGCCGTCATTCGTGGGTTCGTCAGTACGGGCTGCGGAAAATGAAATATTTTCTAAACTTTTTAAACATTCTCAGTTAATTTTTTTTTTTTTAGTAATAATAATATTATTATTATATTTTTGCTGCGTCAACAACATAAATAATATAAAATTAATATAATTTTAAACATCACCGTGAAATTATTTAGAAAAAACAATGGTCTGGCTAAGGTGAGTTTGGCTCAATAGTATTAGCATGTACTCTATTCTTATAAGTCAAAGGTTCAATCTCCCACCGTTGCAATTTGGTTTCAACTTTCATGAACTTATCAAACACAAAATTAAAATTTAAGAGACTAACTTGATATTTTCTAAAGTTTAGTTTGGGTCTAACATTTCAATAAATACTTAGTTTAGTTTTGTGGCCTTTTCAACACAAGCATGACTAAACTTGTTTGACATTTTTTTTTTCCTTCAACAAAAAGATGTTGGCTAATAGTTTACCCGTGTCCACAATTATTTGCATTGCATCTTCAATTACTAATGTTGTTTCACTTCAATTTTACAAATAGAATGAGTTTGGGTTTTGTTTTTGCATGTTTGTTCACTAATATTGGAAATTAATGATGCCATTGCAGACAGTACCACTGTTCCACTTCTATAAAGATGGGGTCTTATTAGAAGCATTTCCCACCAGAGATAAAGAGAGGATTCTTACAGCCATAAGCAAATATTCATCCTCTGCACTTCAAATCTGATTTTATCATTATCCTTCTGGACTCCCACCTTTTGTAGAATAGTAGCACAGAAAACCATAAATTTGATATAAACTCCATCCTGCCCTTTATGTGACCATGTGAGTTCTTGGTAGGAATTATATTTTGTGTAAAAC

mRNA sequence

ATGTCAACCACCCACGTGAAAGAAAATCAATGGCAAACGAAGGAAGAAGATAATGGTGGCGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCGGAGGTAACCCACTGTTCATTCACTAAAAAAGACCCAAATCGGAGTTTTTGGGTATATATGCATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAGCTTTAATCAGTTCTGGATTAAACCCAAATGAAGAAGTGGAATCGAGATTCCCCATTTCAATTCCCTGCTGGTTGTCGTCGGAGAAAGGACAGGTTCGATTGTCGATTACAAGACCCGAAGTTCGGAGACACCAATTGTTGTTCAAGAGTAAAATCAGAGTTGGTGCTGGAAATCAGGAGGAGTTGTTTGATGAAGATGATGATCTTTGTCCTGTAGACTGTGTGAGGGAATTCAAGACGGACGAAGAGTTCCTTAAAATTCTAGACAGAAGGAAAACGGGGTCTGGTGATCAAGAAGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAGCAATCTGAGGTTGCTGAACGACTAAGGATCAGGACAGTACCACTGTTCCACTTCTATAAAGATGGGGTCTTATTAGAAGCATTTCCCACCAGAGATAAAGAGAGGATTCTTACAGCCATAAGCAAATATTCATCCTCTGCACTTCAAATCTGATTTTATCATTATCCTTCTGGACTCCCACCTTTTGTAGAATAGTAGCACAGAAAACCATAAATTTGATATAAACTCCATCCTGCCCTTTATGTGACCATGTGAGTTCTTGGTAGGAATTATATTTTGTGTAAAAC

Coding sequence (CDS)

ATGTCAACCACCCACGTGAAAGAAAATCAATGGCAAACGAAGGAAGAAGATAATGGTGGCGTCGTGTCATTTTCTCGTTCGCAGCTGCTCCTCTGCTCTTCTTCCCGCTCGGAGGTAACCCACTGTTCATTCACTAAAAAAGACCCAAATCGGAGTTTTTGGGTATATATGCATATATATGTTGCAATGCAAAGGCAGAACCAGAATGTACTGCAATGTAAAGCTTTAATCAGTTCTGGATTAAACCCAAATGAAGAAGTGGAATCGAGATTCCCCATTTCAATTCCCTGCTGGTTGTCGTCGGAGAAAGGACAGGTTCGATTGTCGATTACAAGACCCGAAGTTCGGAGACACCAATTGTTGTTCAAGAGTAAAATCAGAGTTGGTGCTGGAAATCAGGAGGAGTTGTTTGATGAAGATGATGATCTTTGTCCTGTAGACTGTGTGAGGGAATTCAAGACGGACGAAGAGTTCCTTAAAATTCTAGACAGAAGGAAAACGGGGTCTGGTGATCAAGAAGCACCGGTTATCTTCTTGAAGCATAATGTCATGGATGAATATGATGAGCAATCTGAGGTTGCTGAACGACTAAGGATCAGGACAGTACCACTGTTCCACTTCTATAAAGATGGGGTCTTATTAGAAGCATTTCCCACCAGAGATAAAGAGAGGATTCTTACAGCCATAAGCAAATATTCATCCTCTGCACTTCAAATCTGA

Protein sequence

MSTTHVKENQWQTKEEDNGGVVSFSRSQLLLCSSSRSEVTHCSFTKKDPNRSFWVYMHIYVAMQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLFKSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRKTGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDKERILTAISKYSSSALQI

Homology

[Close]

BLAST of ClCG08G015940 vs. NCBI nr
Match: XP_038886222.1 (thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886224.1 thioredoxin-like 4, chloroplastic [Benincasa hispida])

HSP 1 Score: 307.8 bits (787), Expect = 8.4e-80
Identity = 162/206 (78.64%), Postives = 167/206 (81.07%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQN+NVLQCKALIS GLNPNEE+ESR PISIP WLSSEKG VRLSITRPEV R QLLF
Sbjct: 1   MQRQNRNVLQCKALISFGLNPNEELESRIPISIPRWLSSEKGNVRLSITRPEVPRQQLLF 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSKIRV AGNQ ELFD+DD+LCPVDCVREFKTDEEFLKILDR K                
Sbjct: 61  KSKIRVTAGNQGELFDDDDELCPVDCVREFKTDEEFLKILDRAKENGTLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQEAPVIFLKHNVMDEYDEQSEVAERLRI+TVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. NCBI nr
Match: KAA0060902.1 (thioredoxin-like 4 [Cucumis melo var. makuwa])

HSP 1 Score: 292.0 bits (746), Expect = 4.8e-75
Identity = 151/206 (73.30%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GL+PNE++ESR PI IP WLSSEK  VRLSITRPEV+RHQLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ E+ DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI++VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. NCBI nr
Match: XP_008444622.1 (PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-74
Identity = 151/206 (73.30%), Postives = 163/206 (79.13%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GL+PNE++ESR PI IP WLSSEK  VRLSITRPEV RHQLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ E+ DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI++VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. NCBI nr
Match: XP_004150883.1 (thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_031736609.1 thioredoxin-like 4, chloroplastic [Cucumis sativus])

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-74
Identity = 152/206 (73.79%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GLNPNE++E R PI IP WLSSEK  VRLSITRPEV R+QLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ EL DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI+TVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. NCBI nr
Match: XP_022144174.1 (thioredoxin-like 4, chloroplastic [Momordica charantia])

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-69
Identity = 162/259 (62.55%), Postives = 178/259 (68.73%), Query Frame = 0


Query: 20  GVVSFSRSQLLLCSSSRSEVTHC-----SFTKKDPNRSFWVYMHIYVAMQRQNQNVLQCK 79
           GVVSFSRSQLLL S SRSE +       +  KK P   F   +HI    + +    + C 
Sbjct: 3   GVVSFSRSQLLLRSPSRSERSFTNNLGKNLRKKRPKSEFG--LHICCNAKGR----MYCS 62

Query: 80  ALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVR-----RHQLLFKSKIRVG 139
           AL SSGLNPNEE+ESR PISIP   S EKG VRLSI+RP++      RHQ LF+S+IRV 
Sbjct: 63  ALFSSGLNPNEELESRIPISIPS-RSFEKGHVRLSISRPQLPSSLNIRHQFLFESRIRVA 122

Query: 140 AGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK----------------------- 199
           AG+Q  L DEDDDLCPVDCVREFKTDE+FLKILDR K                       
Sbjct: 123 AGSQGGLSDEDDDLCPVDCVREFKTDEDFLKILDRAKETGALVVVDFYRTSCGSCKYIEQ 182

Query: 200 ------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR 240
                  GSGD+E PVIFLKHNV+DEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR
Sbjct: 183 GFAKLCKGSGDEETPVIFLKHNVIDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR 242

[Close]

BLAST of ClCG08G015940 vs. ExPASy Swiss-Prot
Match: Q9C5C5 (Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 79/133 (59.40%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 132 NQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK------------------------- 191
           N  EL DE+DDLCPV+CV EFKTD+E L +L++ K                         
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 192 ----TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDK 236
                 SGDQEAPVIFLKHNV+DEYDEQSEVAERLRI+ VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

[Close]

BLAST of ClCG08G015940 vs. ExPASy Swiss-Prot
Match: Q6YTI3 (Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0567100 PE=2 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.9e-30
Identity = 66/126 (52.38%), Postives = 84/126 (66.67%), Query Frame = 0


Query: 138 DEDDDLCPVDCVREFKTDEEFLKILDRRKT-----------------------------G 197
           +E+++ CPV+CV EFKT+EE  ++L+R K                              G
Sbjct: 74  EEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSCKYIEQGFMKLCKG 133

Query: 198 SGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDKERILTA 235
           SGD  + V+FLKHNV+DEYDEQSEVA+RLRI+ VPLFHFYK+GVLLEAF TRDKERI+ A
Sbjct: 134 SGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLEAFATRDKERIIAA 193

[Close]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL
Match: A0A5A7UYD0 (Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00350 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.3e-75
Identity = 151/206 (73.30%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GL+PNE++ESR PI IP WLSSEK  VRLSITRPEV+RHQLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVQRHQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ E+ DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI++VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL
Match: A0A0A0LP39 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.2e-75
Identity = 152/206 (73.79%), Postives = 162/206 (78.64%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GLNPNE++E R PI IP WLSSEK  VRLSITRPEV R+QLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLNPNEKMEPRIPILIPRWLSSEKEPVRLSITRPEVPRNQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ EL DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGELSDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI+TVPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKTVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL
Match: A0A1S3BBI1 (thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 5.2e-75
Identity = 151/206 (73.30%), Postives = 163/206 (79.13%), Query Frame = 0


Query: 63  MQRQNQNVLQCKALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVRRHQLLF 122
           MQRQNQNVLQCK LIS GL+PNE++ESR PI IP WLSSEK  VRLSITRPEV RHQLL+
Sbjct: 1   MQRQNQNVLQCKTLISFGLHPNEKLESRIPILIPRWLSSEKEPVRLSITRPEVPRHQLLY 60

Query: 123 KSKIRVGAGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK---------------- 182
           KSK+RV AGNQ E+ DEDDDLCPVDCVREFKTDEEF+KILD+ K                
Sbjct: 61  KSKMRVNAGNQGEMGDEDDDLCPVDCVREFKTDEEFIKILDKAKENGGLVVVDFYRTSCG 120

Query: 183 -------------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVL 240
                         GSGDQ+APVIFLKHNVMDEYDEQSEVAERLRI++VPLFHFYKDGVL
Sbjct: 121 SCKYIEQGFAKLCKGSGDQQAPVIFLKHNVMDEYDEQSEVAERLRIKSVPLFHFYKDGVL 180

[Close]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL
Match: A0A6J1CRI9 (thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 6.5e-70
Identity = 162/259 (62.55%), Postives = 178/259 (68.73%), Query Frame = 0


Query: 20  GVVSFSRSQLLLCSSSRSEVTHC-----SFTKKDPNRSFWVYMHIYVAMQRQNQNVLQCK 79
           GVVSFSRSQLLL S SRSE +       +  KK P   F   +HI    + +    + C 
Sbjct: 3   GVVSFSRSQLLLRSPSRSERSFTNNLGKNLRKKRPKSEFG--LHICCNAKGR----MYCS 62

Query: 80  ALISSGLNPNEEVESRFPISIPCWLSSEKGQVRLSITRPEVR-----RHQLLFKSKIRVG 139
           AL SSGLNPNEE+ESR PISIP   S EKG VRLSI+RP++      RHQ LF+S+IRV 
Sbjct: 63  ALFSSGLNPNEELESRIPISIPS-RSFEKGHVRLSISRPQLPSSLNIRHQFLFESRIRVA 122

Query: 140 AGNQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK----------------------- 199
           AG+Q  L DEDDDLCPVDCVREFKTDE+FLKILDR K                       
Sbjct: 123 AGSQGGLSDEDDDLCPVDCVREFKTDEDFLKILDRAKETGALVVVDFYRTSCGSCKYIEQ 182

Query: 200 ------TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR 240
                  GSGD+E PVIFLKHNV+DEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR
Sbjct: 183 GFAKLCKGSGDEETPVIFLKHNVIDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTR 242

[Close]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL
Match: A0A6J1GH82 (thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.7e-65
Identity = 147/233 (63.09%), Postives = 166/233 (71.24%), Query Frame = 0


Query: 49  PNRSFWVYMH-------IYVAMQRQNQNVLQCKALISSGLNPNEEVESR-FPISIPCWLS 108
           P +SF + +H       +YVAMQRQNQNVL+CKAL+S G     ++ESR  PISIP WL 
Sbjct: 18  PAQSFPIEVHSLNKTQILYVAMQRQNQNVLKCKALLSVG-----KLESRIIPISIPFWL- 77

Query: 109 SEKGQVRLSITRPEVR-----RHQLLFKSKIRVGAGNQEELFDEDDDLCPVDCVREFKTD 168
           SE   VRLSITRPE       RH+L+FKSK RV AGNQ  L DEDDDLCPV+CVREFKTD
Sbjct: 78  SENPHVRLSITRPEAPPYLSIRHELMFKSKPRVAAGNQGGLSDEDDDLCPVECVREFKTD 137

Query: 169 EEFLKILDRRK-----------------------------TGSGDQEAPVIFLKHNVMDE 228
           EEF++IL+R K                              GSGDQEAPVIFLKHNV+DE
Sbjct: 138 EEFIRILERAKESGALVVVDFYRTSCGSCKYIEQGFAKLCRGSGDQEAPVIFLKHNVVDE 197

Query: 229 YDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDKERILTAISKYSSSALQI 240
           YDEQSEVAERLRI+TVPLFHFYKDGVLLEAFPTRDKERIL AI+KYSS+ALQ+
Sbjct: 198 YDEQSEVAERLRIKTVPLFHFYKDGVLLEAFPTRDKERILAAITKYSSTALQL 244

[Close]

BLAST of ClCG08G015940 vs. TAIR 10
Match: AT1G07700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 79/133 (59.40%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 132 NQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK------------------------- 191
           N  EL DE+DDLCPV+CV EFKTD+E L +L++ K                         
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 192 ----TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDK 236
                 SGDQEAPVIFLKHNV+DEYDEQSEVAERLRI+ VPLFHFYK+GVLLE+F TRDK
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 189

[Close]

BLAST of ClCG08G015940 vs. TAIR 10
Match: AT1G07700.3 (Thioredoxin superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35
Identity = 79/133 (59.40%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 132 NQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK------------------------- 191
           N  EL DE+DDLCPV+CV EFKTD+E L +L++ K                         
Sbjct: 83  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 142

Query: 192 ----TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPLFHFYKDGVLLEAFPTRDK 236
                 SGDQEAPVIFLKHNV+DEYDEQSEVAERLRI+ VPLFHFYK+GVLLE+F TRDK
Sbjct: 143 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKAVPLFHFYKNGVLLESFATRDK 202

[Close]

BLAST of ClCG08G015940 vs. TAIR 10
Match: AT1G07700.2 (Thioredoxin superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-21
Identity = 54/102 (52.94%), Postives = 63/102 (61.76%), Query Frame = 0


Query: 132 NQEELFDEDDDLCPVDCVREFKTDEEFLKILDRRK------------------------- 191
           N  EL DE+DDLCPV+CV EFKTD+E L +L++ K                         
Sbjct: 70  NLVELSDENDDLCPVECVTEFKTDDELLSVLEKSKETNSLVVVDFYRTACGSCKYIEQGF 129

Query: 192 ----TGSGDQEAPVIFLKHNVMDEYDEQSEVAERLRIRTVPL 205
                 SGDQEAPVIFLKHNV+DEYDEQSEVAERLRI+ +PL
Sbjct: 130 SKLCKQSGDQEAPVIFLKHNVVDEYDEQSEVAERLRIKVIPL 171

The following BLAST results are available for this feature:

BLAST of ClCG08G015940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886222.1	8.4e-80	78.64	thioredoxin-like 4, chloroplastic [Benincasa hispida] >XP_038886223.1 thioredoxi...	[more]
KAA0060902.1	4.8e-75	73.30	thioredoxin-like 4 [Cucumis melo var. makuwa]	[more]
XP_008444622.1	1.1e-74	73.30	PREDICTED: thioredoxin-like 4, chloroplastic [Cucumis melo]	[more]
XP_004150883.1	1.1e-74	73.79	thioredoxin-like 4, chloroplastic [Cucumis sativus] >XP_011649582.1 thioredoxin-...	[more]
XP_022144174.1	1.3e-69	62.55	thioredoxin-like 4, chloroplastic [Momordica charantia]	[more]

BLAST of ClCG08G015940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5C5	1.5e-34	59.40	Thioredoxin-like 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g07700 P...	[more]
Q6YTI3	4.9e-30	52.38	Thioredoxin-like 4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os...	[more]

BLAST of ClCG08G015940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UYD0	2.3e-75	73.30	Thioredoxin-like 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G0...	[more]
A0A0A0LP39	5.2e-75	73.79	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357300...	[more]
A0A1S3BBI1	5.2e-75	73.30	thioredoxin-like 4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487891 PE=4 S...	[more]
A0A6J1CRI9	6.5e-70	62.55	thioredoxin-like 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013927...	[more]
A0A6J1GH82	3.7e-65	63.09	thioredoxin-like 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111454145 ...	[more]

BLAST of ClCG08G015940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07700.1	1.0e-35	59.40	Thioredoxin superfamily protein	[more]
AT1G07700.3	1.0e-35	59.40	Thioredoxin superfamily protein	[more]
AT1G07700.2	1.5e-21	52.94	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 146..238 e-value: 2.2E-5 score: 26.1
None	No IPR available	CDD	cd02947	TRX_family	coord: 176..217 e-value: 1.5218E-6 score: 43.3157
IPR044176	Thioredoxin-like 4, chloroplastic	PANTHER	PTHR47912	THIOREDOXIN-LIKE 4, CHLOROPLASTIC	coord: 168..236 coord: 105..166
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 176..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G015940.1	ClCG08G015940.1	mRNA