ClCG08G014415 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGTCCACCAAACTGACGCAGACGGCGGTGGTGAAGCAAATTAAGAAGCGGTGTTCGGGTTTGAGAATCAACAAGAATAAGAATACTAACCACCAATGCGGCGGCGGAGAGATTCCGGTGGATGTTCCGAAAGGGCATTTTGTGGTGTATGTGAGTGAAAATAGAAGCCGTTACATTGTGCCGCTCACGTTTTTGAGCAGGCCGGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTCGATCATAATATGGGCCTCACTATCCCTTGTGAGGAGCAAGTGTTTGAATCTCTTACTTCCATGCTCCGATAA ATGGCGGTGTCCACCAAACTGACGCAGACGGCGGTGGTGAAGCAAATTAAGAAGCGGTGTTCGGGTTTGAGAATCAACAAGAATAAGAATACTAACCACCAATGCGGCGGCGGAGAGATTCCGGTGGATGTTCCGAAAGGGCATTTTGTGGTGTATGTGAGTGAAAATAGAAGCCGTTACATTGTGCCGCTCACGTTTTTGAGCAGGCCGGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTCGATCATAATATGGGCCTCACTATCCCTTGTGAGGAGCAAGTGTTTGAATCTCTTACTTCCATGCTCCGATAA ATGGCGGTGTCCACCAAACTGACGCAGACGGCGGTGGTGAAGCAAATTAAGAAGCGGTGTTCGGGTTTGAGAATCAACAAGAATAAGAATACTAACCACCAATGCGGCGGCGGAGAGATTCCGGTGGATGTTCCGAAAGGGCATTTTGTGGTGTATGTGAGTGAAAATAGAAGCCGTTACATTGTGCCGCTCACGTTTTTGAGCAGGCCGGAGTTTCAAATTCTTCTCCAATTGGCTGAGGAGGAGTTCGGGTTCGATCATAATATGGGCCTCACTATCCCTTGTGAGGAGCAAGTGTTTGAATCTCTTACTTCCATGCTCCGATAA MAVSTKLTQTAVVKQIKKRCSGLRINKNKNTNHQCGGGEIPVDVPKGHFVVYVSENRSRYIVPLTFLSRPEFQILLQLAEEEFGFDHNMGLTIPCEEQVFESLTSMLR Homology
BLAST of ClCG08G014415 vs. NCBI nr
Match: XP_038886317.1 (auxin-responsive protein SAUR50-like [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 1.3e-48 Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0
BLAST of ClCG08G014415 vs. NCBI nr
Match: XP_004152658.1 (auxin-responsive protein SAUR50 [Cucumis sativus] >KGN62666.1 hypothetical protein Csa_021944 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 8.8e-45 Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of ClCG08G014415 vs. NCBI nr
Match: XP_008444786.1 (PREDICTED: auxin-induced protein 15A-like [Cucumis melo] >KAA0065174.1 auxin-induced protein 15A-like [Cucumis melo var. makuwa]) HSP 1 Score: 184.1 bits (466), Expect = 6.3e-43 Identity = 98/117 (83.76%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of ClCG08G014415 vs. NCBI nr
Match: KAG6598492.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 172.2 bits (435), Expect = 2.5e-39 Identity = 87/104 (83.65%), Postives = 90/104 (86.54%), Query Frame = 0
BLAST of ClCG08G014415 vs. NCBI nr
Match: XP_022997035.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima]) HSP 1 Score: 170.2 bits (430), Expect = 9.5e-39 Identity = 86/103 (83.50%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.4e-32 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy Swiss-Prot
Match: Q9SL45 (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28 Identity = 63/101 (62.38%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.4e-21 Identity = 53/104 (50.96%), Postives = 68/104 (65.38%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy Swiss-Prot
Match: P33082 (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.5e-15 Identity = 36/67 (53.73%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy TrEMBL
Match: A0A0A0LRM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G366710 PE=3 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.3e-45 Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy TrEMBL
Match: A0A5A7VD05 (Auxin-induced protein 15A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005110 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43 Identity = 98/117 (83.76%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy TrEMBL
Match: A0A1S3BB62 (auxin-induced protein 15A-like OS=Cucumis melo OX=3656 GN=LOC103488031 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.1e-43 Identity = 98/117 (83.76%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy TrEMBL
Match: A0A6J1K8F3 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111492083 PE=3 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 4.6e-39 Identity = 86/103 (83.50%), Postives = 89/103 (86.41%), Query Frame = 0
BLAST of ClCG08G014415 vs. ExPASy TrEMBL
Match: A0A6J1HE76 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111462673 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 6.0e-39 Identity = 87/110 (79.09%), Postives = 90/110 (81.82%), Query Frame = 0
BLAST of ClCG08G014415 vs. TAIR 10
Match: AT1G75580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 142.5 bits (358), Expect = 2.0e-34 Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of ClCG08G014415 vs. TAIR 10
Match: AT1G19830.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 140.6 bits (353), Expect = 7.5e-34 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of ClCG08G014415 vs. TAIR 10
Match: AT4G34760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 140.2 bits (352), Expect = 9.8e-34 Identity = 69/108 (63.89%), Postives = 84/108 (77.78%), Query Frame = 0
BLAST of ClCG08G014415 vs. TAIR 10
Match: AT2G21220.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 133.3 bits (334), Expect = 1.2e-31 Identity = 69/105 (65.71%), Postives = 82/105 (78.10%), Query Frame = 0
BLAST of ClCG08G014415 vs. TAIR 10
Match: AT2G16580.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 127.9 bits (320), Expect = 5.0e-30 Identity = 67/109 (61.47%), Postives = 82/109 (75.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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