ClCG08G013800 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G013800
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	lariat debranching enzyme
Location	CG_Chr08: 26636360 .. 26645293 (+)
RNA-Seq Expression	ClCG08G013800
Synteny	ClCG08G013800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGCGATTTGGTTCCAATAATGCCGCTTTCTTCGTCTCTTTCTCCCACATAGAAGATCATACAATCTCGCGGTAGTGGGCAATGGCGAGCGACGAAGAGAGAGCTCTAGAGCAGCAGCTGGAGGTTCAATTACACGAGCAGAGAGAGTCTCTCGCCGCCTTACAAGATGCCCTAGCCTCCGACGCCTCCAATCCGGAGCTTCTCGAGGTACATTTATTTTCTCCCATTTGAATTTCCTTTTGGCTTTAGAGAAAATTCACGAAAGGAATACGTGAACCGAGTTTTTTCTTCTTGTTGAATTCAGTTATATGATTTTAGAAGTTTCGGAGACCTCTGGCCGTTGATTTTTCTGAATTTAATCTGTTTGAATGTTAAGGTTCATGAGGAGCTTGTCCAAGCAATTAAAGATGCTGAGGAAGGGTTGCTTCACCTTAAGCGTTCTAGGTTATTACGAGAAGCAGATTCGGTGTTGCGTGGTCGTGATAGTAACGCAACGGAGGATGTTAAGGTGGAGCCTCTTGATCCTACGGATGTCGAAGCTGAACCACTTAAGGATCAGAGTTTCATCGTCGGATCGAAATGCAGATTCCGGCACACTGATGGACGTTGGTATGACGGTGAAATTGTTGGATTGGATGGTTCTAATTCTGCGAAAATTTCTTTCCTCACTCCTACAACTGAAAATATGTTGGTAAGCATTCTGGGACGCTATATGTCGGCTTTTGCGAAACTGTTAGTATTATTAGTTATTATTTTGACTTGCATTGGGTTTTGTGTATTGCTTCTGTACGGTTGTGGTTGTCTTCGATCTTTTGAGGGAATTCGACTAGCTTCTTCCCTTTAATAGTACCGAGGATCAGTTTGCTGCTACTGACTAGATGAGTATTATCAAGTGTTATCAGTGACTTGGATTTTGATTCCCCTAAAATTTTGAGCAATCTCTATGGTTTTTCTCACATCATGATACTAATGCTACATAACACCACCAAAGTGCAGATATGCAAGTTCTTCTTACAGCAAAGATGTCGGTTTGGCACTAACTGCCGCTTATCGCATGGTATGTCATATTCTTTCATGTCGACCATGTAGATCCAACAACTCATTAAGTAAAGCCTTCCTCTTGTTTCAGTGGTTGTTCCCACCAGCAATACTATCTTGAGATGCTAGGATGGATTATTAACTCTATTTAATAAAGGAACCTGCAGAACAAATGATGAAGTTCCTGTTTCAGTCAAGGATTAAAAATGTTTTCCTTCATAGGAGTCAAGTTTGGGAAAAAAAAATTCGGGTGTTTGGTTTTCTTGTTCATGAATCTTTAATCGTTTTCATTCCTAATAGAAGAATGGGAGTCCATCTTAGATCTTCAACAATTCATTATTTCTTATACCCCTTGAGATTGCAAACAGTTTTGTTTCTATTAAAAGAAGAATACAAGAGGTAATGGAGGCACTAGATACCCGTCCCCAATCCTAAAACTAAAGAAAATGGAGACTACACTGAAGAAAAACTGTCAAGGAACTGTGAACTAAGCTATTTCATTTTCACCTAAGAGAGTGAGCAAAGAGAAACTGTCATGGATTTCTCCATCACTCTAATATCTTTGAAAATTCAATTGCCTGTGTTATGAATTAGGTAGGTGTTGTTTGTGAATATCAAACATTTAGAACTCCTCTTCAATTCAGCTGTCTCTGTGTGTAAATTCCTTGCATGATACATTCTATGACTGCTTTATGTAACACAAGATAGTCTTGCCCTTCAATATTTTTGAAAAATACATGTTACATTTTGCCTCTGTTCCAATAGTGCCATGGTCATGAATTTCTTCCCCCTTGATTTATTGTTTCCATTTTATTTAATTGAACTTACCCCAGTTTTTTGTTCACCTTTTCTGAGAACGGTCTTTTTCCTTCTATGAAAAACAAAAGGAAATAGCCATGCTGCTATTCTCAATTATATATTTTTCCCTTCTGTATATCATAAAAGTCTAGAAGTCAATAGCTATGCTGCTATTCTCTATTAAGCTCGTCAAGCAATTTAGAGTTTGAGGAGGATATATTTTTACATTCATTTCTTTTTCTAAGACTAGGTATTCGTTCTTCTGTATAATGTATATCTTTATAGACAATATCTATGCTGTTATTCTCAATTAACTGAGAGAGTTCTTCGTGTGCAGGAGTTGATATCCCTTTAACCTCTCTTAGGAGATATGTGCCAACAATTTGGAATCAGTCACTGGCAGGGTCCAGTATCTGGGCTCTCTCGTCTAGGAATGACATTTGGAAGCATGCTGAATTGGAATCTTGGGATGATGCACTTCAAGTTGCACAGGTTGTTTTTAGAGGTGATGGATCCTCTCAAAAGCTTGGACCAGAGGACATAGCGCTATCTGAGTATGCTCAAATTAATGATGAAGAGGAAAGTGATTCCAGCCTGGAACAATCTGACTCAAGTGATTATGAAGAGGATGATCTGCAAGGTTTGGGATTTCTCGAGAGCTCCCAGCAGAGGGGCATCCAGAAAGAGACCACCATATTTGCTAAATGGGAGAACCATACCCGAGGGATTGCTTCCAAGATGATGGCTAATATGGGCTATCGCGAAGGAATGGGTTTGGGTGCATCTGGGCAGGGGATGCTAAATCCTGTCCCTGTCAAAGTTCTTCCAGCAAAACAATCTCTTGATCATGCTCTAGAGTCACAAAAGGAGAATAATACTAATGACAAGAATAATGGTAAGAAAAGAAGTAGAGGCGGTAAGAGGAAACGTGAGAAGAAGTTTGCTGCAGCGACACGTGCAGCTAAAGAGGAAGAAGAGTCAAGACCTGATGTCTTTAATCTTATCAACAATCACCTAGCAATGCATAATGGAGCATTGAATGATGGATCCGTGAAGAAACTGAAAGATAAAGGTTCTGCAGATGGGAAGAAGGTGGATAGACGAACCCTAATTGCGTATGATGATGAGGTGAAAGACTTGCGAATACGAATAGAGAAGCTTGAAGAAATGGTGAGCAGAAACAAGAAAGAGAAGGTTGTTTACGAGGCTGCCTTAAGAAAGCTCAATGAGACCCGGAAAGCTTTGGCCATGGCTGAGGCAGCTCACGCATCTGCATCAAATGCAGTTACCAGCAGAGAAAAGGAAAAAAGATGGTTGAAGTTTTAGGATCCTACTCGATGTTAACATGCTTCTGAAACAGAACGCCACAGTGAATTATCGAAGTGAATCTTGCGACTCGACTTGTATTGGCTGTTGGTGTATTTTCATCCGGGGCTCAAACTATAAGATTATTCAACCCTCCCCCCATTTAATATGAATTTTGTGGGAATATCATACTGTTATTAGATTGTATTTTGGCAGGTATAATCCACGGAATGGAGTAATATAAGCAGGGACAACAATCTATTTATTTGGTTGTCAGATAATTGAATTCTAAATCATAATGTAGGTGACAGGCTCGGATTATAATTCATCCATCTGCAGTTAGCTTCTTATAGTTCGGTTCTTTTTTTGTTTATTTTTTGGTATCATACTTTTACCCTAATACAAAGAGGGCATAATCTAAGAGTTGGAAAAGATATGAGGGGTATTTATTTAATTTTATATATAATAGATCGTTTTAAATTTATTTCTAGTACATATTAGACCATAAATTTTGATAAATTAGTGGCTTGGACTAAATTTGTAATTTAATTCATATTTTTTCTGATATATAATATCTTTAAGATTTATAACCAATCCAATCATATTCAATCTCTTTCTCACTTATTCTTTATTTAGTGGATTTTATTTGAATTAATTTAATAGATGGGCTATTAATTACTGAATTGTAAAATTAGTTAAAATTATTTAAAATATCCTGAACTCTGCACCAGGTTTTAGATATGGCTTAGATTTTGAGAAGAAAAAATGTTTTTATGATATCATTTATACATTCGCATAAATTGTTGTGGCAATTGATATTTAAATTTTCATTTTTGATATGAAATAGAAATGATCTTGACTTCGAATAGATTTTCTAAATAGAAATAGACACAATTAATATTTAATATTAAATTTTTAAATAGAAAGAATTATTTTCATATATCGGATAATGAACCATCTTATTTATAAATATAGCAAAATAAAAAATAACAAAATAGCAAAAAGTAGTATAGATGAGTCTATCGTTGTATTACTGTCTTTTAGTGATTAATTTATTACTATTTAAAAATTTTTATTCTTGTTTTTGTTATATTTAAAAATATTTAAAACAGTTTTATGATTTAAAATAATTACCCACCATTCTTAACTCTAATCAGGCCTTCTCTTTCCTAAATTTCAAAATTAAGAATAAACTTTGGATAACCCCAGAGTCGTGGAGGATTTTGTACACTTTTACCAAAAATAATGCTCGACAATTGACAAAGGGTTTTTGCTTCCTAGGTGGAAAAGAAATAGAGGGTTTATGCGTTTGGGGGTATGAATTGATTCATTTACATCGATAGATTCAGAATCGTCTCTTCGGGCGAGGAAGAAGAAGAAGCAGCAACATGAGGATCGCAGTGGAAGGTTGCATGCACGGTGACCTCGACAATGTCTACAGAACTCTCCAATACATGGAGCAAGTTCAGAACATCAAAATCGACCTTCTGCTCTGCTGTGGCGACTTTCAGGTAGTCCTTCAACCCCGCTTGCATCGTATTTTTCCGCATATTCTTTTCTATTTTGAAGTATCTTCTCCCCAAAATCGTTACAATTTTCTGAGCGATTTAGGCTGTTAGGAATGAGAACGATCTGAAGAGCTTAAATGTGCCGCCCAAATATCGGTCTATGAACTCGTTCTGGAAGTATTACTCTGGAGCTGAAGTCGCTCCCTATCCTACTATTTTCATTGGTGGAAATCATGAAGCGTCTAATTATCTGTGGGAATTGTGAGTTACTTGAGCTTAGCTTGCGTTATATCATAAAGGGTCTCCATGAGTTTTTCGGTTGTTTGTGTTATTGGTGTCTAGAGATATAAACTTATTTTGGGGGTAATAGAAATTCTGAAAGTGAATTGAATCACCATCGTGGATTACCACTTGTGTATTGTTTTTAATTTTTAGAATGCTTTGAGTATTGCTGAATAATGTGTGTACTAAATAATTGGCCATAAAAGTTTCCGGGACAGCTACCAGGCATTCAGATAGTTGGTCGTCCTGTTGAACAATTATATGAGTTCTTTTCAGAATCATCTCCATCCCCTCAATTTCAATCGTTCCCGTGTCTTTTTTTTTCCCCTTTCCATTTAATTGTTGTTTTTCTTATGCTTTGTATGCTTATATGCATATGGTGCATTAATTATTATTTATGATCTGATTTCTATTTTAGGTACTATGGAGGTTGGGCTGCGCCTAATATATACTTCTTGGGCGTTGCTGGTGTAGTCAAGTTTGGAAATATCCGTATTGGTGGGCTATCTGGGATTTATAATGCACGCCATTATCATTTAGGTGAGTGAATAACTTTCTGTCCGTTAATTTATGTAGATGCAAAACAGTGCAAGGTAGTTATCTGGATTGGTTAGCAACAGCATGCAGTCAAGGTTTTTTTTTGTTCCCTTCTTCATGTGCATTAATGGCCTTGAGTGAGAATAGGCTGAATAGCTTACATAGTGAGTAGCTGCATCATCTATTGGTAGGTTTGTTCTAGGTTGGGGTTTTCATTCTTGAGTTCTTTTGAGGAGGCGCTCACATTTTATTACCTTTTGAGGAACTGTCTTGTTGGTAAATGTATTGGAAGTGGTTCAATTGGTGGGTAGCGTACTAAATCATTAAATTTTCAGAATATAGGAAGTCCTGCCTACTGGGAGTATGTTCAGCTTATTAAGAAAAGTTGACGTTCAAATGTACAGTTGCGCTTTTCTATCTGTGTTTCCTGTTATATTACTGCAATATGTAATAACTGCTAAGCTACATGCAACGAAATCTTCTTCACATGTAATGAGCAGGTCACTATGAGAGGCCTCCATACAATGAGAATACTATAAGATCTATTTACCATGTTCGCGAATATGATGTTCAGAAGCTTATGCAAGTTGAGGAACCCATTGACATTTTTCTTTCTCATGATTGGCCACTTGGCATCACTGATTATGGAAACTGGAAGCAACTTGTTAGGTTTAAACCATTTTTCGAGAAGGAGGTAACTAAAAATATTTTATACTGCCTTCTTACTGAACCACTTTCTAAAATGCGTGCATAGTAACTCTCTACAATGAACTGCTTTGACATAGATGTAAATTCTTTAATTGTCACTTGGATGTAAGATTTTTATTACTGACATTTTGAGGGTATCCACCTCTTACATGAATTTATATGTTGTCATCATCGGAGTAAATTGCTCCTAGTTGATGTGAAAAGTATCGGATCTGCTACATCTACGCATCACTCTTAAATTCCATTAACCTACTAAGATTGTCTCATAGAAAAACCTATGAAGATTTTAGTAATGAACTCGATTAGCACTTAGCAGAGGGTAAAAGTGAATGTTGAAGAGGATTATATAGAGTGCTATTAAATTCAATAAAAGCTTGTTAAAATCTCAAAATTTATGAGACCTATATCATAACAACTAGATCTGCTTGTAAAGTCAGAAGCAATGAAGCGGATCCAGAAAGCTAGTATAAATTCTAATTCCTGCGTGGCTTCAACTTCAACTTTAGGTTATGAAGAAAGCATAAGTAAATTGAACGTATAATAGTCAAAGAACCTTGAGGAATTAGACTTATATTTCTGCACAAGTTGAGGGATCCAACCTATTAGCAATAGAATGGTACCTGGTAGAATTTGAACAGATTCCAGATAAAATATTTCAAATTTTCTGTTATGTTTATTGACGGACTGATTTTGACCTTAGTACCAGTAAACTTATGTACATGAATTTTAAATGCCAGATTCAGGAAAAAAGTCTTGGGAGTAAGGCTGCAGCTGTGTTGCTGGAAAAGTTGAGACCACCTTACTGGTTTTCAGCCCACCTGCACTGTAAGTTTGCTGCTCTTGTTCAACATGGTGAAGGTGGCCCCTTGACAAAATTTCTTGCTCTTGATAAGTGTCTTCCTAGGCGCAAATTTTTACAGGTACTTCATTTTGGTTTGAATTTCTTATAAAAAATTATTTGAATTTCTTAATAGTAATCGATAGGGTCCTTTTTTGATCTTTGGTGGATGCTGGTGATTTCAAAGTTTTAACTGTGGGCATGTGGTTTTTTAGGTTATAGAGATCGAAGCAGAGCCTGGGCCTTATGAGATTCATTATGATGAAGAATGGTTAGCAATAACACGAAGGTTCAATGAAATCTTCCCTTTGACAGCCAAAAATGCAAATTATGGGTGAGTATGTTTTACAAGTTATTGTGAAGATCTGGTTGGACAATACGACATTTCTTTCTCATTTGTGAGTTAGTTGTAGTATGAGTTGTAACCTCCATTTTTTAATATCAGAAATATAAAGCTTGAAATGGAAGATTGTCGGCAATGGATCAAAACCAGGTTAAAAGAAAGAGGAACAAAACCTTTTGATTTTGTTCAGACTGTTCCTTGTTACGATCCATCAAGACCTGTCTCCAACAGTCTGCTTGCTGGTAATTCAAATATATATATATATATATATATATATATATATTTTTTTTTCATTTGAGTTATATCTGTGTAAGTAGAAAAATTTCTCATCTATTGTCCCTTAACAGATGTAGATGGTTTTTGGCGATTCTGTTTGATAATGTTGTGATTGCTTGCCAAGTTTTTGCCGAATGATGAATGACTAATGAACTTTGATCTTGTGTTCTTTGTCTAGTTCACTCTGCTAGTTACCAGGGAGAGTGATTTCCGTTTTCAGTGTCTTAATGAATGATTTGTTGTGTATCACAGGATATCCTCGAAATCCTCAGACTGAATCTTTGCTGAAGTTTCTCGAACTCCCTTATCTTCTTGATGACATGTTGGAATCTCATGGACCATCAGGGAACTCTATTCCTTTGTCAGATAGTGGTAAACTATTTTTCTTATGCTGTGGTTTATTTGCTGCTAGATAACTTCTTAGAATAAGTAGTTCTGCTATAGATTTATGTAAATATCTTAGATCCATCTGGCCGTGGTTCAAAATAAATGAAGCTAAGAACTCTCCAATATAATTTTATCGGGACATAGGGCTTCTTTGAATTAGTCTATTAGCATAATAGTAGAGTTTTGTTGCACTTCTCTGAGGCCTGTAGTACTAGAAAAAATTATTCGAATGTGGTGGCCTCGGTTGGGTGTGGATTCCATAAACTACATGTCTTGAACGTGTAATTTCTTGGGATTTGGTGAACGTGTTGTATAATTTCCACATTTGACGAGTAGTAAATTTGTTCCAACCCTTATAAATGTAAGTTTTCTGTAATATTTATGGATGTAGGTACGTTCTTTGACAGTGAAGACATTCCAATTGATGATATAGATGATGTGGAAGAAGAAACTGCAGAACCTGAAGATGCATAAACCCAGAATCTTGGCAATGACACCAAAATCTTCCACAATTAATGAAAGATTGATCGCTTAAGCTTTATGCTATAAATTATAATTGTATAGAATGGGCTCTCTCTTCCCACTTAATTATATATCCCAATTACATTAATGTGAATGGATTGAGCCTTTAGTTAGTTACCAAACTCTTCGTGGAACACTTTTTTTTCACCCAGAAAGAGAGATTGTAAAGTGACTACTTGAAGTGTCATGCATTCTAGAGAATTTACCCTCTTTTAATTTAAAAATTAGCTTTGAAATGAATTGTATTTGCTAAGGTCTGTCTGAGGCTTGTGATCTTCAATAGTTATCGAAAATTTATCGGTGGATTTTCAAATAGATGTTCTTTGGAGGATTTTGAATATTAGTATATGTTGACATGGTCGGAAATATTAAGAGCTTGATTTGAT

mRNA sequence

ATGGCGTGGGCAATGGCGAGCGACGAAGAGAGAGCTCTAGAGCAGCAGCTGGAGGTTCAATTACACGAGCAGAGAGAGTCTCTCGCCGCCTTACAAGATGCCCTAGCCTCCGACGCCTCCAATCCGGAGCTTCTCGAGTTATATGATTTTAGAAGTTTCGGAGACCTCTGGCCGTTGATTTTTCTGAATTTAATCTGTTTGAATGTTAAGGTTCATGAGGAGCTTGTCCAAGCAATTAAAGATGCTGAGGAAGGGTTGCTTCACCTTAAGCGTTCTAGGTTATTACGAGAAGCAGATTCGGTGTTGCGTGGTCGTGATAGTAACGCAACGGAGGATGTTAAGGTGGAGCCTCTTGATCCTACGGATGTCGAAGCTGAACCACTTAAGGATCAGAGTTTCATCGTCGGATCGAAATGCAGATTCCGGCACACTGATGGACGTTGGTATGACGGTGAAATTGTTGGATTGGATGGTTCTAATTCTGCGAAAATTTCTTTCCTCACTCCTACAACTGAAAATATGTTGGTAAGCATTCTGGGACGCTATATGTCGGCTTTTGCGAAACTTGACTTGGATTTTGATTCCCCTAAAATTTTGAGCAATCTCTATGGTTTTTCTCACATCATGATACTAATGCTACATAACACCACCAAAGTGCAGATATGCAAGTTCTTCTTACAGCAAAGATGTCGGTTTGGCACTAACTGCCGCTTATCGCATGGAGTTGATATCCCTTTAACCTCTCTTAGGAGATATGTGCCAACAATTTGGAATCAGTCACTGGCAGGGTCCAGTATCTGGGCTCTCTCGTCTAGGAATGACATTTGGAAGCATGCTGAATTGGAATCTTGGGATGATGCACTTCAAGTTGCACAGGTTGTTTTTAGAGGTGATGGATCCTCTCAAAAGCTTGGACCAGAGGACATAGCGCTATCTGAGTATGCTCAAATTAATGATGAAGAGGAAAGTGATTCCAGCCTGGAACAATCTGACTCAAGTGATTATGAAGAGGATGATCTGCAAGGTTTGGGATTTCTCGAGAGCTCCCAGCAGAGGGGCATCCAGAAAGAGACCACCATATTTGCTAAATGGGAGAACCATACCCGAGGGATTGCTTCCAAGATGATGGCTAATATGGGCTATCGCGAAGGAATGGGTTTGGGTGCATCTGGGCAGGGGATGCTAAATCCTGTCCCTGTCAAAGTTCTTCCAGCAAAACAATCTCTTGATCATGCTCTAGAGTCACAAAAGGAGAATAATACTAATGACAAGAATAATGGTAAGAAAAGAAGTAGAGGCGGTAAGAGGAAACGTGAGAAGAAGTTTGCTGCAGCGACACGTGCAGCTAAAGAGGAAGAAGAGTCAAGACCTGATGTCTTTAATCTTATCAACAATCACCTAGCAATGCATAATGGAGCATTGAATGATGGATCCGTGAAGAAACTGAAAGATAAAGGTTCTGCAGATGGGAAGAAGGTGGATAGACGAACCCTAATTGCGTATGATGATGAGGTGAAAGACTTGCGAATACGAATAGAGAAGCTTGAAGAAATGGTGAGCAGAAACAAGAAAGAGAAGGTTGTTTACGAGGCTGCCTTAAGAAAGCTCAATGAGACCCGGAAAGCTTTGGCCATGGCTGAGGCAGCTCACGCATCTGCATCAAATGCAGTTACCAGCAGAGAAAAGGAAAAAAGATGGTTGAAGTATAATCCACGGAATGGAATTCAGAATCGTCTCTTCGGGCGAGGAAGAAGAAGAAGCAGCAACATGAGGATCGCAGTGGAAGGTTGCATGCACGGTGACCTCGACAATGTCTACAGAACTCTCCAATACATGGAGCAAGTTCAGAACATCAAAATCGACCTTCTGCTCTGCTGTGGCGACTTTCAGGCTGTTAGGAATGAGAACGATCTGAAGAGCTTAAATGTGCCGCCCAAATATCGGTCTATGAACTCGTTCTGGAAGTATTACTCTGGAGCTGAAGTCGCTCCCTATCCTACTATTTTCATTGGTGGAAATCATGAAGCGTCTAATTATCTGTGGGAATTGTACTATGGAGGTTGGGCTGCGCCTAATATATACTTCTTGGGCGTTGCTGGTGTAGTCAAGTTTGGAAATATCCGTATTGGTGGGCTATCTGGGATTTATAATGCACGCCATTATCATTTAGGTCACTATGAGAGGCCTCCATACAATGAGAATACTATAAGATCTATTTACCATGTTCGCGAATATGATGTTCAGAAGCTTATGCAAGTTGAGGAACCCATTGACATTTTTCTTTCTCATGATTGGCCACTTGGCATCACTGATTATGGAAACTGGAAGCAACTTGTTAGGTTTAAACCATTTTTCGAGAAGGAGTCAGAAGCAATGAAGCGGATCCAGAAAGCTAGTATAAATTCTAATTCCTGCGTGGCTTCAACTTCAACTTTAGGTTATGAAGAAAGCATAAGTAAATTGAACATTCAGGAAAAAAGTCTTGGGAGTAAGGCTGCAGCTGTGTTGCTGGAAAAGTTGAGACCACCTTACTGGTTTTCAGCCCACCTGCACTGTAAGTTTGCTGCTCTTGTTCAACATGGTGAAGGTGGCCCCTTGACAAAATTTCTTGCTCTTGATAAGTGTCTTCCTAGGCGCAAATTTTTACAGGTTATAGAGATCGAAGCAGAGCCTGGGCCTTATGAGATTCATTATGATGAAGAATGGTTAGCAATAACACGAAGGTTCAATGAAATCTTCCCTTTGACAGCCAAAAATGCAAATTATGGAAATATAAAGCTTGAAATGGAAGATTGTCGGCAATGGATCAAAACCAGGTTAAAAGAAAGAGGAACAAAACCTTTTGATTTTGTTCAGACTGTTCCTTGTTACGATCCATCAAGACCTGTCTCCAACAGTCTGCTTGCTGGATATCCTCGAAATCCTCAGACTGAATCTTTGCTGAAGTTTCTCGAACTCCCTTATCTTCTTGATGACATGTTGGAATCTCATGGACCATCAGGGAACTCTATTCCTTTGTCAGATAGTGGTACGTTCTTTGACAGTGAAGACATTCCAATTGATGATATAGATGATGTGGAAGAAGAAACTGCAGAACCTGAAGATGCATAAACCCAGAATCTTGGCAATGACACCAAAATCTTCCACAATTAATGAAAGATTGATCGCTTAAGCTTTATGCTATAAATTATAATTGTATAGAATGGGCTCTCTCTTCCCACTTAATTATATATCCCAATTACATTAATGTGAATGGATTGAGCCTTTAGTTAGTTACCAAACTCTTCGTGGAACACTTTTTTTTCACCCAGAAAGAGAGATTGTAAAGTGACTACTTGAAGTGTCATGCATTCTAGAGAATTTACCCTCTTTTAATTTAAAAATTAGCTTTGAAATGAATTGTATTTGCTAAGGTCTGTCTGAGGCTTGTGATCTTCAATAGTTATCGAAAATTTATCGGTGGATTTTCAAATAGATGTTCTTTGGAGGATTTTGAATATTAGTATATGTTGACATGGTCGGAAATATTAAGAGCTTGATTTGAT

Coding sequence (CDS)

ATGGCGTGGGCAATGGCGAGCGACGAAGAGAGAGCTCTAGAGCAGCAGCTGGAGGTTCAATTACACGAGCAGAGAGAGTCTCTCGCCGCCTTACAAGATGCCCTAGCCTCCGACGCCTCCAATCCGGAGCTTCTCGAGTTATATGATTTTAGAAGTTTCGGAGACCTCTGGCCGTTGATTTTTCTGAATTTAATCTGTTTGAATGTTAAGGTTCATGAGGAGCTTGTCCAAGCAATTAAAGATGCTGAGGAAGGGTTGCTTCACCTTAAGCGTTCTAGGTTATTACGAGAAGCAGATTCGGTGTTGCGTGGTCGTGATAGTAACGCAACGGAGGATGTTAAGGTGGAGCCTCTTGATCCTACGGATGTCGAAGCTGAACCACTTAAGGATCAGAGTTTCATCGTCGGATCGAAATGCAGATTCCGGCACACTGATGGACGTTGGTATGACGGTGAAATTGTTGGATTGGATGGTTCTAATTCTGCGAAAATTTCTTTCCTCACTCCTACAACTGAAAATATGTTGGTAAGCATTCTGGGACGCTATATGTCGGCTTTTGCGAAACTTGACTTGGATTTTGATTCCCCTAAAATTTTGAGCAATCTCTATGGTTTTTCTCACATCATGATACTAATGCTACATAACACCACCAAAGTGCAGATATGCAAGTTCTTCTTACAGCAAAGATGTCGGTTTGGCACTAACTGCCGCTTATCGCATGGAGTTGATATCCCTTTAACCTCTCTTAGGAGATATGTGCCAACAATTTGGAATCAGTCACTGGCAGGGTCCAGTATCTGGGCTCTCTCGTCTAGGAATGACATTTGGAAGCATGCTGAATTGGAATCTTGGGATGATGCACTTCAAGTTGCACAGGTTGTTTTTAGAGGTGATGGATCCTCTCAAAAGCTTGGACCAGAGGACATAGCGCTATCTGAGTATGCTCAAATTAATGATGAAGAGGAAAGTGATTCCAGCCTGGAACAATCTGACTCAAGTGATTATGAAGAGGATGATCTGCAAGGTTTGGGATTTCTCGAGAGCTCCCAGCAGAGGGGCATCCAGAAAGAGACCACCATATTTGCTAAATGGGAGAACCATACCCGAGGGATTGCTTCCAAGATGATGGCTAATATGGGCTATCGCGAAGGAATGGGTTTGGGTGCATCTGGGCAGGGGATGCTAAATCCTGTCCCTGTCAAAGTTCTTCCAGCAAAACAATCTCTTGATCATGCTCTAGAGTCACAAAAGGAGAATAATACTAATGACAAGAATAATGGTAAGAAAAGAAGTAGAGGCGGTAAGAGGAAACGTGAGAAGAAGTTTGCTGCAGCGACACGTGCAGCTAAAGAGGAAGAAGAGTCAAGACCTGATGTCTTTAATCTTATCAACAATCACCTAGCAATGCATAATGGAGCATTGAATGATGGATCCGTGAAGAAACTGAAAGATAAAGGTTCTGCAGATGGGAAGAAGGTGGATAGACGAACCCTAATTGCGTATGATGATGAGGTGAAAGACTTGCGAATACGAATAGAGAAGCTTGAAGAAATGGTGAGCAGAAACAAGAAAGAGAAGGTTGTTTACGAGGCTGCCTTAAGAAAGCTCAATGAGACCCGGAAAGCTTTGGCCATGGCTGAGGCAGCTCACGCATCTGCATCAAATGCAGTTACCAGCAGAGAAAAGGAAAAAAGATGGTTGAAGTATAATCCACGGAATGGAATTCAGAATCGTCTCTTCGGGCGAGGAAGAAGAAGAAGCAGCAACATGAGGATCGCAGTGGAAGGTTGCATGCACGGTGACCTCGACAATGTCTACAGAACTCTCCAATACATGGAGCAAGTTCAGAACATCAAAATCGACCTTCTGCTCTGCTGTGGCGACTTTCAGGCTGTTAGGAATGAGAACGATCTGAAGAGCTTAAATGTGCCGCCCAAATATCGGTCTATGAACTCGTTCTGGAAGTATTACTCTGGAGCTGAAGTCGCTCCCTATCCTACTATTTTCATTGGTGGAAATCATGAAGCGTCTAATTATCTGTGGGAATTGTACTATGGAGGTTGGGCTGCGCCTAATATATACTTCTTGGGCGTTGCTGGTGTAGTCAAGTTTGGAAATATCCGTATTGGTGGGCTATCTGGGATTTATAATGCACGCCATTATCATTTAGGTCACTATGAGAGGCCTCCATACAATGAGAATACTATAAGATCTATTTACCATGTTCGCGAATATGATGTTCAGAAGCTTATGCAAGTTGAGGAACCCATTGACATTTTTCTTTCTCATGATTGGCCACTTGGCATCACTGATTATGGAAACTGGAAGCAACTTGTTAGGTTTAAACCATTTTTCGAGAAGGAGTCAGAAGCAATGAAGCGGATCCAGAAAGCTAGTATAAATTCTAATTCCTGCGTGGCTTCAACTTCAACTTTAGGTTATGAAGAAAGCATAAGTAAATTGAACATTCAGGAAAAAAGTCTTGGGAGTAAGGCTGCAGCTGTGTTGCTGGAAAAGTTGAGACCACCTTACTGGTTTTCAGCCCACCTGCACTGTAAGTTTGCTGCTCTTGTTCAACATGGTGAAGGTGGCCCCTTGACAAAATTTCTTGCTCTTGATAAGTGTCTTCCTAGGCGCAAATTTTTACAGGTTATAGAGATCGAAGCAGAGCCTGGGCCTTATGAGATTCATTATGATGAAGAATGGTTAGCAATAACACGAAGGTTCAATGAAATCTTCCCTTTGACAGCCAAAAATGCAAATTATGGAAATATAAAGCTTGAAATGGAAGATTGTCGGCAATGGATCAAAACCAGGTTAAAAGAAAGAGGAACAAAACCTTTTGATTTTGTTCAGACTGTTCCTTGTTACGATCCATCAAGACCTGTCTCCAACAGTCTGCTTGCTGGATATCCTCGAAATCCTCAGACTGAATCTTTGCTGAAGTTTCTCGAACTCCCTTATCTTCTTGATGACATGTTGGAATCTCATGGACCATCAGGGAACTCTATTCCTTTGTCAGATAGTGGTACGTTCTTTGACAGTGAAGACATTCCAATTGATGATATAGATGATGTGGAAGAAGAAACTGCAGAACCTGAAGATGCATAA

Protein sequence

MAWAMASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNLICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVEAEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMSAFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDIPLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKLGPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSQQRGIQKETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTNDKNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLKDKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKALAMAEAAHASASNAVTSREKEKRWLKYNPRNGIQNRLFGRGRRRSSNMRIAVEGCMHGDLDNVYRTLQYMEQVQNIKIDLLLCCGDFQAVRNENDLKSLNVPPKYRSMNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVKFGNIRIGGLSGIYNARHYHLGHYERPPYNENTIRSIYHVREYDVQKLMQVEEPIDIFLSHDWPLGITDYGNWKQLVRFKPFFEKESEAMKRIQKASINSNSCVASTSTLGYEESISKLNIQEKSLGSKAAAVLLEKLRPPYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRKFLQVIEIEAEPGPYEIHYDEEWLAITRRFNEIFPLTAKNANYGNIKLEMEDCRQWIKTRLKERGTKPFDFVQTVPCYDPSRPVSNSLLAGYPRNPQTESLLKFLELPYLLDDMLESHGPSGNSIPLSDSGTFFDSEDIPIDDIDDVEEETAEPEDA

Homology

[Close]

BLAST of ClCG08G013800 vs. NCBI nr
Match: XP_038886257.1 (zinc finger CCCH domain-containing protein 22 [Benincasa hispida])

HSP 1 Score: 862.8 bits (2228), Expect = 2.9e-246
Identity = 471/566 (83.22%), Postives = 482/566 (85.16%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQLHEQRESLAALQDALASDASNPELLE                  
Sbjct: 1   MASDEERALEHQLEVQLHEQRESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDS A EDVKVEP D TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSKAAEDVKVEPFDHTDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EP +DQSF+VGSKCRFRHTDGRWYDGEIVGLDGSNSAK+SFLTPTTENML         
Sbjct: 121 PEPPEDQSFVVGSKCRFRHTDGRWYDGEIVGLDGSNSAKVSFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------ICKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLRRYVPTIWNQSLAGSSIWALSS+NDIW+HAELESWDDALQVAQVVF+GDGSSQKL
Sbjct: 241 PLTSLRRYVPTIWNQSLAGSSIWALSSKNDIWRHAELESWDDALQVAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDI LSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQRGIQ ETTIFAK
Sbjct: 301 GPEDITLSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQRGIQTETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGY EGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYCEGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALN GSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNGGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRTLIA+DDEVKDLRIRIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTLIAFDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A  EAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEVEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. NCBI nr
Match: XP_008445277.1 (PREDICTED: zinc finger CCCH domain-containing protein 22 [Cucumis melo] >KAA0064875.1 zinc finger CCCH domain-containing protein 22 [Cucumis melo var. makuwa])

HSP 1 Score: 852.4 bits (2201), Expect = 4.0e-243
Identity = 464/566 (81.98%), Postives = 481/566 (84.98%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQLHEQ+ESLAALQDALASDASNPELLE                  
Sbjct: 1   MASDEERALEHQLEVQLHEQKESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRG DSN  EDVK EPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGHDSNPAEDVKAEPLYATDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EPL+D SF+VGSKCRFR+TDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PEPLEDHSFVVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               +CKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------MCKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLR YVPTIWNQS+AGSSIWALSSRNDIW+HAELESWDDALQVAQVVF+GDGSSQKL
Sbjct: 241 PLTSLRSYVPTIWNQSMAGSSIWALSSRNDIWRHAELESWDDALQVAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQ+GIQ ET IFAK
Sbjct: 301 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSIQQKGIQTETAIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAA+RAAKEEEESRPDVFNLIN+HLAMHN ALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRT+IAYDDEVKDLR+RIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTIIAYDDEVKDLRVRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. NCBI nr
Match: XP_004138693.1 (zinc finger CCCH domain-containing protein 22 [Cucumis sativus] >KGN63006.1 hypothetical protein Csa_021935 [Cucumis sativus])

HSP 1 Score: 835.1 bits (2156), Expect = 6.6e-238
Identity = 458/566 (80.92%), Postives = 477/566 (84.28%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQL+EQ+ESLAALQDALASD SN ELLE                  
Sbjct: 1   MASDEERALEHQLEVQLYEQKESLAALQDALASDPSNSELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREAD+VLRG DSNA EDVKVEPLD TD++
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAAEDVKVEPLDATDIK 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EPL+D SF VGSKCRFR+TDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               +CKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------MCKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLR YVPTIWNQS+AGSSI ALSSRNDIW+HAELESWDDALQVAQVVF+GDG SQKL
Sbjct: 241 PLTSLRSYVPTIWNQSMAGSSILALSSRNDIWRHAELESWDDALQVAQVVFKGDGYSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALSEYA INDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQ+GIQ ETTIFAK
Sbjct: 301 GPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAA+RAAKEEEESRPDVFNLIN+HLAMHN ALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSAD KKVDRRT+IAYDDEVKDLRIRIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADWKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAV SREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVNSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. NCBI nr
Match: KAG6598538.1 (Zinc finger CCCH domain-containing protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 834.3 bits (2154), Expect = 1.1e-237
Identity = 457/566 (80.74%), Postives = 475/566 (83.92%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MA+DEER LE QLEVQLHEQRESLAALQDALASDA NPELLE                  
Sbjct: 1   MANDEERVLEHQLEVQLHEQRESLAALQDALASDAFNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREAD VL GRDSNA EDVKVEPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADLVLCGRDSNAAEDVKVEPLHSTDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  KDQSF+VGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PESPKDQSFVVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFFLQQRCRFGT+CRLSHGVDI
Sbjct: 181 ------------------------------------ICKFFLQQRCRFGTSCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLRRY PTIWNQSLAGSSIWALSSRN IW+HAELESWDDALQ+AQVVF+GDGSSQKL
Sbjct: 241 PLTSLRRYAPTIWNQSLAGSSIWALSSRNGIWRHAELESWDDALQIAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALS  AQI+D EESDSSLE+SDSSDYE+DDLQGLGFLESS QQRGIQ ETTIFAK
Sbjct: 301 GPEDIALSVRAQISDGEESDSSLEKSDSSDYEDDDLQGLGFLESSTQQRGIQMETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKR+KKFAAA +AAKEEE+SRPDVFNLINNHLAMHNGALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKRDKKFAAAMQAAKEEEDSRPDVFNLINNHLAMHNGALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRTLIAYDDEVKDLR+RIEKLEEMV+RNK EKVV+EAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTLIAYDDEVKDLRVRIEKLEEMVNRNKNEKVVFEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. NCBI nr
Match: KAG7029470.1 (Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 833.6 bits (2152), Expect = 1.9e-237
Identity = 456/566 (80.57%), Postives = 475/566 (83.92%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MA+DEER LE QLEVQLHEQRESLAALQDALASDASNPELLE                  
Sbjct: 1   MANDEERVLEHQLEVQLHEQRESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREAD VL GRDSNA EDVKVEPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADLVLCGRDSNAAEDVKVEPLHSTDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  KDQSF+VGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PESPKDQSFVVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFFLQQRCRFGT+CRLSHGVDI
Sbjct: 181 ------------------------------------ICKFFLQQRCRFGTSCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLRRY PTIWNQSLAGSSIWALSSRN IW+HAELESWDDALQ+A+VVF+GDGSSQKL
Sbjct: 241 PLTSLRRYAPTIWNQSLAGSSIWALSSRNGIWRHAELESWDDALQIARVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALS  AQI+D EESDSS E+SDSSDYE+DDLQGLGFLESS QQRGIQ ETTIFAK
Sbjct: 301 GPEDIALSVRAQISDGEESDSSFEKSDSSDYEDDDLQGLGFLESSTQQRGIQMETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKR+KKFAAA +AAKEEE+SRPDVFNLINNHLAMHNGALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKRDKKFAAAMQAAKEEEDSRPDVFNLINNHLAMHNGALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRTLIAYDDEVKDLR+RIEKLEEMV+RNK EKVV+EAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTLIAYDDEVKDLRVRIEKLEEMVNRNKNEKVVFEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot
Match: Q94K01 (Lariat debranching enzyme OS=Arabidopsis thaliana OX=3702 GN=DBR1 PE=2 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 8.5e-164
Identity = 285/449 (63.47%), Postives = 342/449 (76.17%), Query Frame = 0


Query: 590  MRIAVEGCMHGDLDNVYRTLQYMEQVQNIKIDLLLCCGDFQAVRNENDLKSLNVPPKYRS 649
            M+IA+EGCMHGDLDNVY+T+Q+ EQ+ N K+DLLLCCGDFQAVRNE D+ SLNVP KYR 
Sbjct: 1    MKIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYRE 60

Query: 650  MNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVKFGNIRI 709
            M SFWKYYSG EVAP PTIFIGGNHEASNYLWELYYGGWAA NIYFLG AGVVKFGN+RI
Sbjct: 61   MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRI 120

Query: 710  GGLSGIYNARHYHLGHYERPPYNENTIRSIYHVREYDVQKLMQVEEPIDIFLSHDWPLGI 769
            GGLSGIYN RHY  GH+ERPPYNE+TIRS+YHVR+YDVQKLMQ+EEP+DIFLSHDWP+GI
Sbjct: 121  GGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPLDIFLSHDWPVGI 180

Query: 770  TDYGNWKQLVRFKPFFEKESEAMKRIQKASINSNSCVASTSTLGYEESISKLNIQEKSLG 829
            TDYG+ + L+R KP+F +E                                  I+EK+LG
Sbjct: 181  TDYGDSESLMRQKPYFRQE----------------------------------IEEKTLG 240

Query: 830  SKAAAVLLEKLRPPYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRKFLQVIEIEA 889
            SK AA+LLEKL+P YWFSAHLHCKFAA VQHG  G +TKFLALDKCLP +KFLQ+IEIE+
Sbjct: 241  SKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIES 300

Query: 890  EPGPYEIHYDEEWLAITRRFNEIFPLTAKNANYGNIKLEMEDCRQWIKTRLKERGTKPFD 949
            EPGP+E+ YDEEWLAITR+FN IFPLT +  N       +++ R+W++ +L+ER  KPF+
Sbjct: 301  EPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNVSTAG-TIQESREWVRKKLEERQFKPFE 360

Query: 950  FVQTVPCYDPSRPVSNSLLAGYPRNPQTESLLKFLELPYLLDD--MLESHGPSGNSIPLS 1009
            F +TVP Y+PS+ V +S +   P+NPQT SLL+ L LPYLLD   +         S+  S
Sbjct: 361  FARTVPAYNPSQRVFDS-IPEIPQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASLAPS 412

Query: 1010 DSGTFFDSEDIPIDDIDDVEE-ETAEPED 1036
            D  T +DSE+IPIDDID++EE E A+ +D
Sbjct: 421  DLPT-YDSEEIPIDDIDEIEEMEEAKADD 412

[Close]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot
Match: Q6AU07 (Lariat debranching enzyme OS=Oryza sativa subsp. japonica OX=39947 GN=DBR1 PE=2 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.4e-161
Identity = 277/446 (62.11%), Postives = 330/446 (73.99%), Query Frame = 0


Query: 590  MRIAVEGCMHGDLDNVYRTLQYMEQVQNIKIDLLLCCGDFQAVRNENDLKSLNVPPKYRS 649
            M+IAVEGCMHG+LD VY TL+ +E+ + +KIDLLLCCGDFQAVRNENDL+ LNV P++R 
Sbjct: 1    MKIAVEGCMHGELDKVYDTLRELEKAEGVKIDLLLCCGDFQAVRNENDLQCLNVKPRFRE 60

Query: 650  MNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVKFGNIRI 709
            M SFWKYYSG  VAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLG AGVVKFGNIRI
Sbjct: 61   MKSFWKYYSGQAVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI 120

Query: 710  GGLSGIYNARHYHLGHYERPPYNENTIRSIYHVREYDVQKLMQVEEPIDIFLSHDWPLGI 769
            GGLSGIY  +HYHLGHYERPPYNENTIRS+YHVR YDV KLM V+EP+DIF+SHDWPLGI
Sbjct: 121  GGLSGIYKQQHYHLGHYERPPYNENTIRSVYHVRHYDVLKLMHVKEPLDIFMSHDWPLGI 180

Query: 770  TDYGNWKQLVRFKPFFEKESEAMKRIQKASINSNSCVASTSTLGYEESISKLNIQEKSLG 829
            T+YGNW++L+R K FFE+E                                  + +++LG
Sbjct: 181  TEYGNWQKLIREKRFFEEE----------------------------------VNKRTLG 240

Query: 830  SKAAAVLLEKLRPPYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRKFLQVIEIEA 889
            S+ AA LL KL+PPYWFSAHLHCKF A++QHGEGGP TKFLALDKCLPRR FLQVI+I +
Sbjct: 241  SEPAARLLNKLKPPYWFSAHLHCKFPAVIQHGEGGPTTKFLALDKCLPRRGFLQVIDIPS 300

Query: 890  EPGPYEIHYDEEWLAITRRFNEIFPLTAKNANYGNIKLEMEDCRQWIKTRLKERGTKPFD 949
             PGP+EI YDEEWLAITR+FN +F LT       + +++ +D  QW++ +L  RG KP D
Sbjct: 301  GPGPHEIQYDEEWLAITRKFNNVFSLTRMPFTMLDEQVDTQDDLQWVRNKLNARGAKPID 360

Query: 950  FVQTVPCYDPSRPVSNSLLAGYPRNPQTESLLKFLELPYLLDDMLESHGPSGNSIPLSDS 1009
            FVQT   YDPS   SN  +  + RNPQTES L+ L LPYLLD    S+G S N    S +
Sbjct: 361  FVQTAASYDPSCQASNPSITVHCRNPQTESFLQLLNLPYLLDSS-NSYGVSRNE-SSSQT 407

Query: 1010 GTFFDSEDIPIDDIDDVEEETAEPED 1036
            G   DS+DI   ++ D E++ A+ +D
Sbjct: 421  GQALDSDDI---ELPDDEDDPADDDD 407

[Close]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot
Match: Q6K687 (Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0793000 PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.3e-143
Identity = 303/578 (52.42%), Postives = 379/578 (65.57%), Query Frame = 0


Query: 1   MAWAMASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLI 60
           MA     DE  ++E QLE  L EQR SL A+ +ALA+D SN +LLE              
Sbjct: 1   MAGEEGEDEAASIELQLEHHLQEQRASLTAVDEALAADPSNADLLE-------------- 60

Query: 61  FLNLICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRD-SNATEDVKVEPLD 120
                     VHEEL+ AIKDAEEGLLHLKRSRL+++ D +   ++ ++   +V V+P  
Sbjct: 61  ----------VHEELLAAIKDAEEGLLHLKRSRLVKQIDEIFPNQEPTSEAPEVAVDP-- 120

Query: 121 PTDVEAEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSIL 180
           P DVE EPL+ Q F VGSKCRFRH DGRWY+G ++GL+GS+ A+ISFLTPT+ENM     
Sbjct: 121 PDDVEPEPLEPQEFSVGSKCRFRHKDGRWYNGCVIGLEGSSDARISFLTPTSENM----- 180

Query: 181 GRYMSAFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLS 240
                                                    +CKFFLQQRCRFG+NCRLS
Sbjct: 181 ----------------------------------------SMCKFFLQQRCRFGSNCRLS 240

Query: 241 HGVDIPLTSLRRYVPTIWNQSLAGSSIWALSSRND-IWKHAELESWDDALQVAQVVFRGD 300
           HG+ IP+ SL+++ PT W QSL GSSI A S  +  +W+ AELESWDD L+V QVVF+ D
Sbjct: 241 HGIVIPILSLKQFTPTRWQQSLVGSSILAASGHHSGLWRRAELESWDDDLKVGQVVFQDD 300

Query: 301 GSSQKLGPEDIALSEYAQINDEE----ESDSSLEQSDSSDYEEDDL-QGLGFLESSQQRG 360
           GSS +L  + +++SEYA  +DE+     SD   + S+  D E++ + QGLG LES    G
Sbjct: 301 GSSARLPSDSLSISEYADESDEDGEGSSSDEGSDFSEDGDQEDESVHQGLGLLESKNLSG 360

Query: 361 IQKETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHAL 420
           +Q ET IFAKWE+HTRG+ASKMMA MGYREGMGLG SGQGML+P+PVKVLP KQSLDHA+
Sbjct: 361 VQTETAIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHAV 420

Query: 421 ESQKENNTNDKNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGA 480
            + + N++     GKKRSRGGKRKREKKFA   RAAK EEE R  VF+ IN+ L   + A
Sbjct: 421 AASEVNDS--VGPGKKRSRGGKRKREKKFAEQARAAKAEEEER-SVFSFINSQLVGQDVA 480

Query: 481 LNDGSVKKLKDKGSADG--KKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEA 540
                  K    G A+G  KK DRR+L+AYDDEVK+LR R+EKLEEM+ RN+K+K  YEA
Sbjct: 481 EGSAVKSKKDSSGEANGHAKKEDRRSLLAYDDEVKELRSRVEKLEEMMKRNRKDKAFYEA 504

Query: 541 ALRKLNETRKALAMAEAAHASASNAVTSREKEKRWLKY 570
           A +KL +TRKALA AEA HASA+NAV  +EKEK+WLK+
Sbjct: 541 ASKKLKQTRKALADAEATHASATNAVARKEKEKKWLKF 504

[Close]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot
Match: Q9SK49 (Zinc finger CCCH domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=At2g24830 PE=2 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.0e-141
Identity = 299/578 (51.73%), Postives = 380/578 (65.74%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MAS+E   LE  L++QL EQ+ESL+++ +AL SD SNPELL                   
Sbjct: 1   MASEENNDLENLLDIQLIEQKESLSSIDEALLSDPSNPELL------------------- 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEEL+ AIK+ EEGLLHLKR+RLL EAD VL G + +A   VK E L+P    
Sbjct: 61  -----SVHEELLSAIKEVEEGLLHLKRARLLEEADIVLNGLNHDA--GVKPEHLEP---- 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  +++  + GSKCRFRHTDGRWY+G I+G +GS+SAKISFLTPT+E+M+         
Sbjct: 121 -EKTEEKKDLDGSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMM--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFF+QQRCRFG++CR SHG+D+
Sbjct: 181 ------------------------------------ICKFFMQQRCRFGSSCRSSHGLDV 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALS-SRNDIWKHAELESWDDALQVAQVVFRGDGSSQK 304
           P++SL+ Y  T W Q + GS IWA+S S+ DIW+ AELESWDD LQV  VVFR D SS K
Sbjct: 241 PISSLKNYEQTEWKQLMVGSKIWAVSGSKYDIWRKAELESWDDELQVGGVVFRDDKSSAK 300

Query: 305 LGPEDIALSEYAQI----------NDEEESDSSLEQSDSSDYEEDDLQGLGFLESSQ-QR 364
           LG + +ALSEYAQ+           DE++S S  E S SSDY+E   QG+GFLES+   R
Sbjct: 301 LGSDSLALSEYAQMTDDDGEEEEEEDEQQSASDSEDSVSSDYDEGSPQGIGFLESTNLPR 360

Query: 365 GIQKETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHA 424
           G+Q +T +FAKWENHTRGIASKMMA+MGYREGMGLG SGQG+LNP+ VKVLPAK+SLD+A
Sbjct: 361 GVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPILVKVLPAKRSLDYA 420

Query: 425 LESQKENNTNDKNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHL-AMHN 484
           LE  +      +   KKRSRGGKRKR KKFA A +AAK+EEES+PD+F+LIN  +    +
Sbjct: 421 LEHIRNGECKSEKQKKKRSRGGKRKRGKKFAEAAKAAKQEEESKPDLFSLINEQIFPTRH 480

Query: 485 GALNDGSVKKLKDKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEA 544
             ++  SVK  ++KG      VDR+ L+ Y DEV+DL++ + KLE+MV+RNKK+ VV EA
Sbjct: 481 EKVHSESVKNRQNKG-----PVDRKALVEYQDEVRDLKLEMLKLEQMVNRNKKDLVVSEA 497

Query: 545 ALRKLNETRKALAMAEAAHASASNAVTSREKEKRWLKY 570
           A R+L E RKALA   A  A+ASNA+ S+E EK+WLK+
Sbjct: 541 ATRRLKEVRKALASTLACQAAASNAIVSKENEKKWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot
Match: Q6P886 (Lariat debranching enzyme OS=Xenopus tropicalis OX=8364 GN=dbr1 PE=2 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.5e-104
Identity = 207/474 (43.67%), Postives = 277/474 (58.44%), Query Frame = 0


Query: 590  MRIAVEGCMHGDLDNVYRTLQYMEQVQNIKIDLLLCCGDFQAVRNENDLKSLNVPPKYRS 649
            M+IAVEGC HG+LD +Y T+Q++E+ +N K+DLLLCCGDFQAVRNE D+K + VP KYR 
Sbjct: 1    MKIAVEGCCHGELDKIYETIQFLEKKENTKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQ 60

Query: 650  MNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVKFGNIRI 709
            M +F+KYYSG ++AP  TIFIGGNHEASNYL EL YGGW APNIY++G AGVVK+  +RI
Sbjct: 61   MQTFYKYYSGEKLAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYVGYAGVVKYRGVRI 120

Query: 710  GGLSGIYNARHYHLGHYERPPYNENTIRSIYHVREYDVQKLMQVEEPIDIFLSHDWPLGI 769
            GG+SGI+ +  Y  GH+ERPPY+++T+RS YHVR  +V +L Q++EP+DIF+SHDWP  I
Sbjct: 121  GGISGIFKSHDYRKGHFERPPYSKDTVRSAYHVRNIEVFRLKQLKEPMDIFMSHDWPRSI 180

Query: 770  TDYGNWKQLVRFKPFFEKESEAMKRIQKASINSNSCVASTSTLGYEESISKLNIQEKSLG 829
              YGN KQL++ K FF +E                                  ++  +LG
Sbjct: 181  YHYGNKKQLLKKKDFFRQE----------------------------------VENNTLG 240

Query: 830  SKAAAVLLEKLRPPYWFSAHLHCKFAALVQH-----GEGGPLTKFLALDKCLPRRKFLQV 889
            S AA+ LL  ++P YWFSAHLH KFAA +QH     GE    TKFLALDKCLP R+FLQ+
Sbjct: 241  SPAASELLLHIQPSYWFSAHLHVKFAAFMQHQTNVEGEIPKATKFLALDKCLPHREFLQI 300

Query: 890  IEIEAEPG-PYEIHYDEEWLAITRRFNEIFPLTAKNANYGNIK--------LEMEDCRQW 949
            +++E +PG P  + YD EWLA+ +   ++  +T+K  N                E  ++ 
Sbjct: 301  VDVEHDPGKPDCLEYDLEWLAVLKATKDLLNITSKTWNMPENNGLHSRWDFSASEKTKRE 360

Query: 950  IKTRLKERGTKPFDFVQTVPCYDPSRPVSNSLLAGYPRNPQTESLLKFLELPYL------ 1009
            I   L      P +F  T  CYDP+ P     +A +  NPQT      L L  L      
Sbjct: 361  ILDDLGHDIKIPCNFCMTTACYDPNNP-QYKRVATHIVNPQTTEFCARLGLVDLNAKIRQ 420

Query: 1010 --------------LDDMLESHGPSGNSIPLSDSGTFFDSEDIPIDDIDDVEEE 1030
                           D +  +  P   S   S   T  + ++I ++D DD E+E
Sbjct: 421  HEEEGDIDITEDNEADSIGSAEDPGEYSTDTSLLSTSINPDEIALEDDDDQEDE 439

[Close]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL
Match: A0A5A7VG65 (Zinc finger CCCH domain-containing protein 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001880 PE=4 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 1.9e-243
Identity = 464/566 (81.98%), Postives = 481/566 (84.98%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQLHEQ+ESLAALQDALASDASNPELLE                  
Sbjct: 1   MASDEERALEHQLEVQLHEQKESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRG DSN  EDVK EPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGHDSNPAEDVKAEPLYATDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EPL+D SF+VGSKCRFR+TDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PEPLEDHSFVVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               +CKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------MCKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLR YVPTIWNQS+AGSSIWALSSRNDIW+HAELESWDDALQVAQVVF+GDGSSQKL
Sbjct: 241 PLTSLRSYVPTIWNQSMAGSSIWALSSRNDIWRHAELESWDDALQVAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQ+GIQ ET IFAK
Sbjct: 301 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSIQQKGIQTETAIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAA+RAAKEEEESRPDVFNLIN+HLAMHN ALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRT+IAYDDEVKDLR+RIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTIIAYDDEVKDLRVRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL
Match: A0A1S3BCA1 (zinc finger CCCH domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103488359 PE=4 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 1.9e-243
Identity = 464/566 (81.98%), Postives = 481/566 (84.98%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQLHEQ+ESLAALQDALASDASNPELLE                  
Sbjct: 1   MASDEERALEHQLEVQLHEQKESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRG DSN  EDVK EPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGHDSNPAEDVKAEPLYATDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EPL+D SF+VGSKCRFR+TDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PEPLEDHSFVVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               +CKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------MCKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLR YVPTIWNQS+AGSSIWALSSRNDIW+HAELESWDDALQVAQVVF+GDGSSQKL
Sbjct: 241 PLTSLRSYVPTIWNQSMAGSSIWALSSRNDIWRHAELESWDDALQVAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQ+GIQ ET IFAK
Sbjct: 301 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSIQQKGIQTETAIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAA+RAAKEEEESRPDVFNLIN+HLAMHN ALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRT+IAYDDEVKDLR+RIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTIIAYDDEVKDLRVRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL
Match: A0A0A0LSP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382790 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 3.2e-238
Identity = 458/566 (80.92%), Postives = 477/566 (84.28%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MASDEERALE QLEVQL+EQ+ESLAALQDALASD SN ELLE                  
Sbjct: 1   MASDEERALEHQLEVQLYEQKESLAALQDALASDPSNSELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREAD+VLRG DSNA EDVKVEPLD TD++
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADTVLRGHDSNAAEDVKVEPLDATDIK 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            EPL+D SF VGSKCRFR+TDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PEPLEDHSFFVGSKCRFRYTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               +CKFFLQQRCRFGTNCRLSHGVDI
Sbjct: 181 ------------------------------------MCKFFLQQRCRFGTNCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLR YVPTIWNQS+AGSSI ALSSRNDIW+HAELESWDDALQVAQVVF+GDG SQKL
Sbjct: 241 PLTSLRSYVPTIWNQSMAGSSILALSSRNDIWRHAELESWDDALQVAQVVFKGDGYSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALSEYA INDEEESDSSLEQSDSSDYEEDDLQGLGFLESS QQ+GIQ ETTIFAK
Sbjct: 301 GPEDIALSEYALINDEEESDSSLEQSDSSDYEEDDLQGLGFLESSTQQKGIQTETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKREKKFAAA+RAAKEEEESRPDVFNLIN+HLAMHN ALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKREKKFAAASRAAKEEEESRPDVFNLINHHLAMHNRALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSAD KKVDRRT+IAYDDEVKDLRIRIEKLEEMV+RNKKEKVVYEAALRKLNETRKAL
Sbjct: 481 DKGSADWKKVDRRTIIAYDDEVKDLRIRIEKLEEMVNRNKKEKVVYEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAV SREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVNSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL
Match: A0A6J1HG42 (zinc finger CCCH domain-containing protein 22-like OS=Cucurbita moschata OX=3662 GN=LOC111462681 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 6.0e-237
Identity = 455/566 (80.39%), Postives = 474/566 (83.75%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MA+DEER LE QLEVQLHEQRESLAALQDALASDASNPELLE                  
Sbjct: 1   MANDEERVLEHQLEVQLHEQRESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEELVQAIKDAEEGLLHLKRSRLLREAD VL GRDSNA EDVKVEPL  TDVE
Sbjct: 61  ------VHEELVQAIKDAEEGLLHLKRSRLLREADLVLCGRDSNAAEDVKVEPLHSTDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  +DQSF+VGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PESPEDQSFVVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFFLQQRCRFGT+CRLSHGVDI
Sbjct: 181 ------------------------------------ICKFFLQQRCRFGTSCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLRRY PTIWNQSL GSSIWALSSRN IW+HAELESWDDALQ+AQVVF+GDGSSQKL
Sbjct: 241 PLTSLRRYAPTIWNQSLTGSSIWALSSRNGIWRHAELESWDDALQIAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALS  AQI+D EESDSSLE+SDSSDYE+DDLQGLGFLESS QQRGIQ ETTIFAK
Sbjct: 301 GPEDIALSVRAQISDGEESDSSLEKSDSSDYEDDDLQGLGFLESSTQQRGIQMETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKR+KKFAAA +AAKEEE+SRPDVFNLINNHLAMHNGALNDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKRDKKFAAAMQAAKEEEDSRPDVFNLINNHLAMHNGALNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRTLIAYD EVKDLR+RIEKLEEMV+RNK EKVV+EAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTLIAYDGEVKDLRVRIEKLEEMVNRNKNEKVVFEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEKRWLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKRWLKF 497

[Close]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL
Match: A0A6J1K5F8 (zinc finger CCCH domain-containing protein 22-like OS=Cucurbita maxima OX=3661 GN=LOC111492462 PE=4 SV=1)

HSP 1 Score: 825.9 bits (2132), Expect = 1.9e-235
Identity = 452/566 (79.86%), Postives = 473/566 (83.57%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MA+DEER LE QLEVQLHEQRESLAALQDALASDASNPELLE                  
Sbjct: 1   MANDEERVLEHQLEVQLHEQRESLAALQDALASDASNPELLE------------------ 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VH+ELVQAIKDAEEGLLHLKRSRLLREAD VL GRDSNA EDVKVEPL  TDVE
Sbjct: 61  ------VHDELVQAIKDAEEGLLHLKRSRLLREADLVLCGRDSNAAEDVKVEPLHSTDVE 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  +DQSF+VGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML         
Sbjct: 121 PESPEDQSFVVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENML--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFFLQQRCRFGT+CRLSHGVDI
Sbjct: 181 ------------------------------------ICKFFLQQRCRFGTSCRLSHGVDI 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALSSRNDIWKHAELESWDDALQVAQVVFRGDGSSQKL 304
           PLTSLRRY PTIWNQSL GSSIWALSSRN IW+HAELESWDDALQ+AQVVF+GDGSSQKL
Sbjct: 241 PLTSLRRYAPTIWNQSLTGSSIWALSSRNGIWRHAELESWDDALQIAQVVFKGDGSSQKL 300

Query: 305 GPEDIALSEYAQINDEEESDSSLEQSDSSDYEEDDLQGLGFLESS-QQRGIQKETTIFAK 364
           GPEDIALS  AQI+D EESDSSLE+SDSSDYE+DDLQGLGFLESS QQRGIQ ETTIFAK
Sbjct: 301 GPEDIALSVRAQISDGEESDSSLEKSDSSDYEDDDLQGLGFLESSTQQRGIQMETTIFAK 360

Query: 365 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHALESQKENNTND 424
           WENHTRGIASKMMANMGYREGMGLGASGQGMLNP+PVKVLPAKQSLDHALESQKENNTND
Sbjct: 361 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPIPVKVLPAKQSLDHALESQKENNTND 420

Query: 425 KNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHLAMHNGALNDGSVKKLK 484
           +NNGKKRSRGGKRKR+KKFAAA +AAKEEE+SRPDVFNLINNHLAMHNGA NDGSVKK K
Sbjct: 421 ENNGKKRSRGGKRKRDKKFAAAMQAAKEEEDSRPDVFNLINNHLAMHNGAPNDGSVKKQK 480

Query: 485 DKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEAALRKLNETRKAL 544
           DKGSADGKKVDRRTLIAYD EVKDLR+RIEKLEEMV+RNK EKVV+EAALRKLNETRKAL
Sbjct: 481 DKGSADGKKVDRRTLIAYDGEVKDLRVRIEKLEEMVNRNKNEKVVFEAALRKLNETRKAL 497

Query: 545 AMAEAAHASASNAVTSREKEKRWLKY 570
           A AEAAHASASNAVTSREKEK+WLK+
Sbjct: 541 AEAEAAHASASNAVTSREKEKKWLKF 497

[Close]

BLAST of ClCG08G013800 vs. TAIR 10
Match: AT4G31770.1 (debranching enzyme 1 )

HSP 1 Score: 579.3 bits (1492), Expect = 6.0e-165
Identity = 285/449 (63.47%), Postives = 342/449 (76.17%), Query Frame = 0


Query: 590  MRIAVEGCMHGDLDNVYRTLQYMEQVQNIKIDLLLCCGDFQAVRNENDLKSLNVPPKYRS 649
            M+IA+EGCMHGDLDNVY+T+Q+ EQ+ N K+DLLLCCGDFQAVRNE D+ SLNVP KYR 
Sbjct: 1    MKIAIEGCMHGDLDNVYKTIQHYEQIHNTKVDLLLCCGDFQAVRNEKDMDSLNVPRKYRE 60

Query: 650  MNSFWKYYSGAEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVKFGNIRI 709
            M SFWKYYSG EVAP PTIFIGGNHEASNYLWELYYGGWAA NIYFLG AGVVKFGN+RI
Sbjct: 61   MKSFWKYYSGQEVAPIPTIFIGGNHEASNYLWELYYGGWAATNIYFLGFAGVVKFGNVRI 120

Query: 710  GGLSGIYNARHYHLGHYERPPYNENTIRSIYHVREYDVQKLMQVEEPIDIFLSHDWPLGI 769
            GGLSGIYN RHY  GH+ERPPYNE+TIRS+YHVR+YDVQKLMQ+EEP+DIFLSHDWP+GI
Sbjct: 121  GGLSGIYNERHYRSGHFERPPYNESTIRSVYHVRDYDVQKLMQLEEPLDIFLSHDWPVGI 180

Query: 770  TDYGNWKQLVRFKPFFEKESEAMKRIQKASINSNSCVASTSTLGYEESISKLNIQEKSLG 829
            TDYG+ + L+R KP+F +E                                  I+EK+LG
Sbjct: 181  TDYGDSESLMRQKPYFRQE----------------------------------IEEKTLG 240

Query: 830  SKAAAVLLEKLRPPYWFSAHLHCKFAALVQHGEGGPLTKFLALDKCLPRRKFLQVIEIEA 889
            SK AA+LLEKL+P YWFSAHLHCKFAA VQHG  G +TKFLALDKCLP +KFLQ+IEIE+
Sbjct: 241  SKPAALLLEKLKPQYWFSAHLHCKFAAAVQHGNDGSVTKFLALDKCLPGKKFLQIIEIES 300

Query: 890  EPGPYEIHYDEEWLAITRRFNEIFPLTAKNANYGNIKLEMEDCRQWIKTRLKERGTKPFD 949
            EPGP+E+ YDEEWLAITR+FN IFPLT +  N       +++ R+W++ +L+ER  KPF+
Sbjct: 301  EPGPFEVLYDEEWLAITRKFNSIFPLTRRYTNVSTAG-TIQESREWVRKKLEERQFKPFE 360

Query: 950  FVQTVPCYDPSRPVSNSLLAGYPRNPQTESLLKFLELPYLLDD--MLESHGPSGNSIPLS 1009
            F +TVP Y+PS+ V +S +   P+NPQT SLL+ L LPYLLD   +         S+  S
Sbjct: 361  FARTVPAYNPSQRVFDS-IPEIPQNPQTLSLLELLGLPYLLDSSPVTGERTDIPASLAPS 412

Query: 1010 DSGTFFDSEDIPIDDIDDVEE-ETAEPED 1036
            D  T +DSE+IPIDDID++EE E A+ +D
Sbjct: 421  DLPT-YDSEEIPIDDIDEIEEMEEAKADD 412

[Close]

BLAST of ClCG08G013800 vs. TAIR 10
Match: AT2G24830.1 (zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein )

HSP 1 Score: 505.0 bits (1299), Expect = 1.4e-142
Identity = 299/578 (51.73%), Postives = 380/578 (65.74%), Query Frame = 0


Query: 5   MASDEERALEQQLEVQLHEQRESLAALQDALASDASNPELLELYDFRSFGDLWPLIFLNL 64
           MAS+E   LE  L++QL EQ+ESL+++ +AL SD SNPELL                   
Sbjct: 1   MASEENNDLENLLDIQLIEQKESLSSIDEALLSDPSNPELL------------------- 60

Query: 65  ICLNVKVHEELVQAIKDAEEGLLHLKRSRLLREADSVLRGRDSNATEDVKVEPLDPTDVE 124
                 VHEEL+ AIK+ EEGLLHLKR+RLL EAD VL G + +A   VK E L+P    
Sbjct: 61  -----SVHEELLSAIKEVEEGLLHLKRARLLEEADIVLNGLNHDA--GVKPEHLEP---- 120

Query: 125 AEPLKDQSFIVGSKCRFRHTDGRWYDGEIVGLDGSNSAKISFLTPTTENMLVSILGRYMS 184
            E  +++  + GSKCRFRHTDGRWY+G I+G +GS+SAKISFLTPT+E+M+         
Sbjct: 121 -EKTEEKKDLDGSKCRFRHTDGRWYNGRIIGFEGSDSAKISFLTPTSESMM--------- 180

Query: 185 AFAKLDLDFDSPKILSNLYGFSHIMILMLHNTTKVQICKFFLQQRCRFGTNCRLSHGVDI 244
                                               ICKFF+QQRCRFG++CR SHG+D+
Sbjct: 181 ------------------------------------ICKFFMQQRCRFGSSCRSSHGLDV 240

Query: 245 PLTSLRRYVPTIWNQSLAGSSIWALS-SRNDIWKHAELESWDDALQVAQVVFRGDGSSQK 304
           P++SL+ Y  T W Q + GS IWA+S S+ DIW+ AELESWDD LQV  VVFR D SS K
Sbjct: 241 PISSLKNYEQTEWKQLMVGSKIWAVSGSKYDIWRKAELESWDDELQVGGVVFRDDKSSAK 300

Query: 305 LGPEDIALSEYAQI----------NDEEESDSSLEQSDSSDYEEDDLQGLGFLESSQ-QR 364
           LG + +ALSEYAQ+           DE++S S  E S SSDY+E   QG+GFLES+   R
Sbjct: 301 LGSDSLALSEYAQMTDDDGEEEEEEDEQQSASDSEDSVSSDYDEGSPQGIGFLESTNLPR 360

Query: 365 GIQKETTIFAKWENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAKQSLDHA 424
           G+Q +T +FAKWENHTRGIASKMMA+MGYREGMGLG SGQG+LNP+ VKVLPAK+SLD+A
Sbjct: 361 GVQTDTALFAKWENHTRGIASKMMASMGYREGMGLGVSGQGILNPILVKVLPAKRSLDYA 420

Query: 425 LESQKENNTNDKNNGKKRSRGGKRKREKKFAAATRAAKEEEESRPDVFNLINNHL-AMHN 484
           LE  +      +   KKRSRGGKRKR KKFA A +AAK+EEES+PD+F+LIN  +    +
Sbjct: 421 LEHIRNGECKSEKQKKKRSRGGKRKRGKKFAEAAKAAKQEEESKPDLFSLINEQIFPTRH 480

Query: 485 GALNDGSVKKLKDKGSADGKKVDRRTLIAYDDEVKDLRIRIEKLEEMVSRNKKEKVVYEA 544
             ++  SVK  ++KG      VDR+ L+ Y DEV+DL++ + KLE+MV+RNKK+ VV EA
Sbjct: 481 EKVHSESVKNRQNKG-----PVDRKALVEYQDEVRDLKLEMLKLEQMVNRNKKDLVVSEA 497

Query: 545 ALRKLNETRKALAMAEAAHASASNAVTSREKEKRWLKY 570
           A R+L E RKALA   A  A+ASNA+ S+E EK+WLK+
Sbjct: 541 ATRRLKEVRKALASTLACQAAASNAIVSKENEKKWLKF 497

[Close]

BLAST of ClCG08G013800 vs. TAIR 10
Match: AT3G09850.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.1e-04
Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 364 WENHTRGIASKMMANMGYREGMGLGASGQGMLNPVPVKVLPAK--QSLDHALESQKENNT 423
           +E HTRG  SKMMA MG+ +G GLG  G+G+  P+     P      LD +++++  + +
Sbjct: 631 FEVHTRGFGSKMMAKMGFIDGGGLGKDGKGIAQPIEAVQRPKSLGLGLDFSIDTEDPSPS 690

Query: 424 NDKNNGKKRSRGGKRKREKK 442
           ++ NN  KR+R     +  K
Sbjct: 691 SNNNNNAKRNRSSSSGKHGK 710

The following BLAST results are available for this feature:

BLAST of ClCG08G013800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886257.1	2.9e-246	83.22	zinc finger CCCH domain-containing protein 22 [Benincasa hispida]	[more]
XP_008445277.1	4.0e-243	81.98	PREDICTED: zinc finger CCCH domain-containing protein 22 [Cucumis melo] >KAA0064...	[more]
XP_004138693.1	6.6e-238	80.92	zinc finger CCCH domain-containing protein 22 [Cucumis sativus] >KGN63006.1 hypo...	[more]
KAG6598538.1	1.1e-237	80.74	Zinc finger CCCH domain-containing protein 18, partial [Cucurbita argyrosperma s...	[more]
KAG7029470.1	1.9e-237	80.57	Zinc finger CCCH domain-containing protein 18 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of ClCG08G013800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K01	8.5e-164	63.47	Lariat debranching enzyme OS=Arabidopsis thaliana OX=3702 GN=DBR1 PE=2 SV=1	[more]
Q6AU07	1.4e-161	62.11	Lariat debranching enzyme OS=Oryza sativa subsp. japonica OX=39947 GN=DBR1 PE=2 ...	[more]
Q6K687	1.3e-143	52.42	Zinc finger CCCH domain-containing protein 18 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SK49	2.0e-141	51.73	Zinc finger CCCH domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q6P886	1.5e-104	43.67	Lariat debranching enzyme OS=Xenopus tropicalis OX=8364 GN=dbr1 PE=2 SV=1	[more]

BLAST of ClCG08G013800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG65	1.9e-243	81.98	Zinc finger CCCH domain-containing protein 22 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BCA1	1.9e-243	81.98	zinc finger CCCH domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LSP5	3.2e-238	80.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382790 PE=4 SV=1	[more]
A0A6J1HG42	6.0e-237	80.39	zinc finger CCCH domain-containing protein 22-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1K5F8	1.9e-235	79.86	zinc finger CCCH domain-containing protein 22-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of ClCG08G013800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31770.1	6.0e-165	63.47	debranching enzyme 1	[more]
AT2G24830.1	1.4e-142	51.73	zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein	[more]
AT3G09850.1	4.1e-04	35.00	D111/G-patch domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	COILS	Coil	Coil	coord: 498..549
None	No IPR available	GENE3D	2.30.30.1190		coord: 199..253 e-value: 2.2E-8 score: 36.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1015..1036
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1000..1036
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 429..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..338
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 414..454
None	No IPR available	PANTHER	PTHR47650	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 22	coord: 5..177 coord: 215..569
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 216..242 e-value: 2.0E-5 score: 34.0
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 216..243 score: 14.905761
IPR007708	Lariat debranching enzyme, C-terminal	SMART	SM01124	DBR1_2	coord: 858..990 e-value: 2.7E-39 score: 146.5
IPR007708	Lariat debranching enzyme, C-terminal	PFAM	PF05011	DBR1	coord: 867..987 e-value: 1.7E-27 score: 96.6
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 366..412 e-value: 9.2E-14 score: 61.7
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 368..410 e-value: 3.0E-12 score: 46.2
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 368..414 score: 13.382217
IPR029052	Metallo-dependent phosphatase-like	GENE3D	3.60.21.10		coord: 590..863 e-value: 3.3E-5 score: 25.5
IPR029052	Metallo-dependent phosphatase-like	SUPERFAMILY	56300	Metallo-dependent phosphatases	coord: 589..887
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 221..241 e-value: 2.6E-6 score: 27.1
IPR004843	Calcineurin-like phosphoesterase domain, ApaH type	PFAM	PF00149	Metallophos	coord: 590..852 e-value: 3.0E-10 score: 41.0
IPR041816	Lariat debranching enzyme, N-terminal metallophosphatase domain	CDD	cd00844	MPP_Dbr1_N	coord: 592..882 e-value: 2.99046E-164 score: 481.751

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G013800.2	ClCG08G013800.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008419	RNA lariat debranching enzyme activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016788	hydrolase activity, acting on ester bonds
molecular_function	GO:0003676	nucleic acid binding