ClCG08G013110 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G013110
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	GTP-binding nuclear protein
Location	CG_Chr08: 26009877 .. 26013162 (+)
RNA-Seq Expression	ClCG08G013110
Synteny	ClCG08G013110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGATTTCTTCTCTCTGCTCTCTTTTTCCCTTAGTATTCGGTAGTTTTGATGCTTCTACTGATTTTCGGTCTCATTGCTTTGCTCAGGCGCTACCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATTGTCGGAGATGGTGGAACAGGCATGGACATAGATTTATATAGTTTCATTTTATCGTTATCTCTTTCAGCTCAATTTGCCATGCTTGTGTAGTTTTCAGGAACCAGAACTATATGATTCTGTTCCTCGGGTTTTAATTAACCCTAACTTCCTTAGTAGAATAGAAATTGTGTCCTCTTCCTCCGTTTTTCTTAGCACATGAATTCGATTGGAGATTGTGCTAAAAACTGGTTATCGGACTAGGCTTTAGATAGGCGTCACATGCTTCGTGTGTATCTTGTGATTAGAGATTGTTAGATCTATGCATTTCTCTTTTTTCAGATTTTTGTGTATTGCGACGATGTCATTAACCTCTAACGGAGAATTGTGTCTTGATCCAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACGTAAGAATGAACTTTGTTGTTAATTATTGCTCGTTGTTTAGTGATTGATTTTTTTTAAGGATGAAGTAGTTTTAATATTTGGCCTGACTTGATAATGTATAGCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACAAACTATGGAAAGATAAGGTTTTACTGCTGGGATACTGCTGGACAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTAGTAAGTGTTCGTGTGTTGTATCAACTGTTTTTTTGATTCACGGCAATGACTTTCACTCTTAACATGCTGCCATATGTTGTTGGAGCGGTATTTTTCCACATGGTTTGTTCACCGTGCTTGCTTCCATTGGATTTACGTGTGTGATTCGTGTACACTTTCTTTTGTTACCATGAAGTAATCTATAATGAACTTGCTCGTGCTGAAGCTATTATGTGAGCCTTCAGAAATTGTGTTTTCCGTATGAGGGATTTGATTACTGAATATATCTATTAGCTGAAATCTAGTACTTCTTGTTGGTCTCGATTTCTAGTAGTTTATACTATGAAATTGCATTACAGTCTAGTCCATCCAGTTCTCTTTGAGCCTAATGCCTAGCTCAGTACCATGCGTGGGACCTGGGGATGTTGCACAATTTTATCTCAAGATGCCTTTTGAATTTCATCGACCTTGCTTACCACCATTGTGATTGCTGCTTAAGATTTTTGAATTTTTGGTGGATGATTTCTGCTAGCCTGATGTGTGCCTCTCTGACTTTTAGTTTAACAAGCATGGTTATATTATAATTTGGCTAGCATGTTCACTTTCAACACCATTACCCAGTCTTAACTATTTCATTTGTTAGATTGAGTGTTTGATTTTTCTAATTTCTTTGTTTGTTCACATTAAAATAATGTTCGTATTAGAGAAAATGAAAGGATGCTAATAGAGATACTTAATTTGTTCATCATATTAAGTATATAAAGTGCTTGGACATCCTTAATTTTTGAGTTTTGTTGTAAGCGTCTTCCGAAATTTTTTCATGGATATTCGAATCCTTTATGAACTCTTGTGACAAATGACATTGTTTTACTATGATATTATGCACCTAGCTTAACCTTTATTTCTCATGCTCACAAGCTCTGCAGAGATGAGCATTTCTTCTCTTATCCCTCATTCATATTGTATTTTAAACATTTGATATTATAATTGGAAATGCAGAATCTATTGTTGACTGTTGCGCAATATGTTGAAACCCTGTATTGTGTAGTTCTCAAATTATACTCAGTTCTATTAGAATTTGATGTGGTGTCTTGTGACTTCAGTTAATTGATTGTTTTTCCATGTCTTTCCCTAAATACTCCTACTCTACTTCACTGTTTTGTCATTTCAATGAATTATACTTGCTTTGTCCTTAGTGTGTCTGTTTTGTCTTGGCTTACTTGTGAGTTTCTTGTTGCTTTGTTGATACTTCTTCAGTTTTATCTGTTCTGACATGTTCAGTCTTGCATCTGTGTTTACTTTTTCCTTAATAATACTACCCTTCGGGTTTATTAGTTCTAACAAGTGTATCTATTCTAACCGTGTTTTTTTCTTTTTTTGGATTTTTCAGTATTCATGGGCAATGTGCCATTATCATGTTTGATGTCACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCATCGTGATCTCTGCAGGTATTGTGTTTCTAACCCTAAAGCTCTGGAACACTTGAAAACTCAGGCTTTGTGTGAAACTATTTTCCTTCAACTTTTGATTTGTGTTAAATGAAGGAAAATAAGTACAGGAAAGGACAAAAAAATGAATGTTTTTCACGTCTTTTTTTATTGTGTTGGTTCTAAAGTTGGGTTTGCTTTACATTAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGACGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTCACCTTCCACAGGAAGAAAAATCTTCAGTATTACGAAATCTCTGCGAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGGTAAGTTCAGTTGTTAGTATTAGCTTGACTTAATTTTGGTTAGTCTTTTTTACTTTCATACAGTCCCATCCTTTGACAAATGAATCCGACTTTTATTGGAACTCGCAGTAATCCGGAGCTTCACTTCGTTGAATCACCTGCCCTGGCTCCTCCTGAAGTTCAAATTGACTTGGCCGCACAAGCACAGTACGTAACTCGCTCTTTCCCGATTGAATATAGACCCGTATCCCTTGTCATCTGCACCTAGAATTTGCATGGAACTTGGAAGTATAGGATTTCGGAACCGTGCCAGTTTTTAGGTGTTATGACAATTATTTACCGCTTAAACAACTAGGCCAACCCAGCTCCTATAATTGGTACTTCTGAGCTAAACAAAAACCTCTTGCAACCAAATTTAGTAGTTTTATTTATTTATTTATTTATTATTATTATTATTATTTTGTGAGGATAATCAAATAAAATCTGAAGTTCGTTTATAATTTTTTTTTAAAGCAATATTGGAATTCTCTATTGAAGTTAGGGTATGTAAAAAAATTAGAAATCTTTTGTTTACATAATTAATAAATGGAAAATGGTACTTCAATGTGTTTCAGGCATGAAGCAGAGTTGGCGCAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCATTTGAGTAA

mRNA sequence

ATGGCGCTACCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATTGTCGGAGATGGTGGAACAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACAAACTATGGAAAGATAAGGTTTTACTGCTGGGATACTGCTGGACAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGGCAATGTGCCATTATCATGTTTGATGTCACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCATCGTGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGACGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTCACCTTCCACAGGAAGAAAAATCTTCAGTATTACGAAATCTCTGCGAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGTAATCCGGAGCTTCACTTCGTTGAATCACCTGCCCTGGCTCCTCCTGAAGTTCAAATTGACTTGGCCGCACAAGCACAGCATGAAGCAGAGTTGGCGCAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCATTTGAGTAA

Coding sequence (CDS)

ATGGCGCTACCAAATCAGGCCACCGTAGATTACCCTAGCTTCAAGCTTGTAATTGTCGGAGATGGTGGAACAGGGAAGACAACCTTTGTTAAACGTCATCTTACTGGAGAGTTCGAGAAGAAATATGAACCGACAATCGGAGTTGAAGTTCATCCACTGGACTTCTTTACAAACTATGGAAAGATAAGGTTTTACTGCTGGGATACTGCTGGACAGGAGAAGTTTGGTGGACTTAGAGATGGTTACTATATTCATGGGCAATGTGCCATTATCATGTTTGATGTCACTGCTCGTTTAACATACAAAAATGTCCCAACATGGCATCGTGATCTCTGCAGGGTTTGTGAGAACATACCCATCGTATTGTGTGGAAACAAGGTCGACGTGAAAAACAGACAGGTTAAAGCAAAGCAGGTCACCTTCCACAGGAAGAAAAATCTTCAGTATTACGAAATCTCTGCGAAGAGTAATTACAACTTTGAGAAGCCCTTCTTGTACCTTGCCAGAAAGCTTGCTGGTAATCCGGAGCTTCACTTCGTTGAATCACCTGCCCTGGCTCCTCCTGAAGTTCAAATTGACTTGGCCGCACAAGCACAGCATGAAGCAGAGTTGGCGCAAGCTGCTGCACAACCTCTTCCTGATGAAGATGACGATGCATTTGAGTAA

Protein sequence

MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFVESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE

Homology

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BLAST of ClCG08G013110 vs. NCBI nr
Match: XP_038884642.1 (GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPase [Citrullus lanatus] >BAR79437.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 460.7 bits (1184), Expect = 7.2e-126
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

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BLAST of ClCG08G013110 vs. NCBI nr
Match: XP_004138736.1 (GTP-binding nuclear protein Ran1A [Cucumis sativus] >XP_008445165.1 PREDICTED: GTP-binding nuclear protein Ran1A-like [Cucumis melo] >KGN62920.1 hypothetical protein Csa_022654 [Cucumis sativus])

HSP 1 Score: 452.6 bits (1163), Expect = 2.0e-123
Identity = 216/221 (97.74%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLA Q QHE ELAQAA QPLPDEDDDAF+
Sbjct: 181 ESPALAPPEVQIDLAVQEQHERELAQAAVQPLPDEDDDAFD 221

[Close]

BLAST of ClCG08G013110 vs. NCBI nr
Match: XP_022996825.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 452.2 bits (1162), Expect = 2.6e-123
Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQID+A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. NCBI nr
Match: XP_022961762.1 (GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-binding nuclear protein Ran-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.7 bits (1158), Expect = 7.4e-123
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATV+YPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQID+A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. NCBI nr
Match: XP_022131431.1 (GTP-binding nuclear protein Ran-3-like [Momordica charantia])

HSP 1 Score: 450.3 bits (1157), Expect = 9.7e-123
Identity = 217/221 (98.19%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQAQHEAEL  AAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELVLAAAQPLPDEDDDAFE 221

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BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-122
Identity = 211/221 (95.48%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQ QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 1.9e-121
Identity = 208/221 (94.12%), Postives = 213/221 (96.38%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALP Q  VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+P LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQ QHEAELA AA+QPLPD+DD+ F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 435.6 bits (1119), Expect = 3.2e-121
Identity = 208/221 (94.12%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV +D+AAQ Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot
Match: P38546 (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 7.2e-121
Identity = 209/221 (94.57%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV IDLAAQA HE EL QAA QPLPD+DD+AFE
Sbjct: 181 ESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot
Match: P38548 (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 2.7e-120
Identity = 206/221 (93.21%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQID+A Q +HE E+ +AA QPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL
Match: A0A068PVW7 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 3.5e-126
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL
Match: A0A0A0LLW2 (GTP-binding nuclear protein OS=Cucumis sativus OX=3659 GN=Csa_2G380000 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.5e-124
Identity = 216/221 (97.74%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLA Q QHE ELAQAA QPLPDEDDDAF+
Sbjct: 181 ESPALAPPEVQIDLAVQEQHERELAQAAVQPLPDEDDDAFD 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL
Match: A0A1S3BCW9 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103488283 PE=3 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 9.5e-124
Identity = 216/221 (97.74%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLA Q QHE ELAQAA QPLPDEDDDAF+
Sbjct: 181 ESPALAPPEVQIDLAVQEQHERELAQAAVQPLPDEDDDAFD 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL
Match: A0A6J1K7U8 (GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.2e-123
Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQID+A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL
Match: A0A6J1HAZ9 (GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 3.6e-123
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQATV+YPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG
Sbjct: 1   MALPNQATVEYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGN EL FV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNTELQFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQID+A QAQHEAELAQAAAQPLPDEDDDAFE
Sbjct: 181 ESPALAPPEVQIDMAVQAQHEAELAQAAAQPLPDEDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 440.3 bits (1131), Expect = 9.4e-124
Identity = 211/221 (95.48%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEVQIDLAAQ QHEAELA AA+QPLPD+DDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of ClCG08G013110 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 435.6 bits (1119), Expect = 2.3e-122
Identity = 208/221 (94.12%), Postives = 214/221 (96.83%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           ESPALAPPEV +D+AAQ Q+EA+LA AAAQPLPD+DDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of ClCG08G013110 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 431.0 bits (1107), Expect = 5.7e-121
Identity = 206/221 (93.21%), Postives = 212/221 (95.93%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTN G
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAG+  LHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPLPDEDDDAFE 222
           E+PALAPPEV ID+A Q ++EAEL QAAAQPLPD+DDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of ClCG08G013110 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 147/212 (69.34%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MALPNQATVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYG 60
           MALPNQ  VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGNPELHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AG+ +L FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVQIDLAAQAQHEAELAQAAAQPL 213
           ES     PE QID       +    +A  QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of ClCG08G013110 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 104.4 bits (259), Expect = 1.2e-22
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNYGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of ClCG08G013110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884642.1	7.2e-126	100.00	GTP-binding nuclear protein Ran1A-like [Benincasa hispida] >BAP11913.1 Ran-GTPas...	[more]
XP_004138736.1	2.0e-123	97.74	GTP-binding nuclear protein Ran1A [Cucumis sativus] >XP_008445165.1 PREDICTED: G...	[more]
XP_022996825.1	2.6e-123	98.19	GTP-binding nuclear protein Ran-3-like [Cucurbita maxima] >KAG6598587.1 GTP-bind...	[more]
XP_022961762.1	7.4e-123	97.74	GTP-binding nuclear protein Ran-3-like [Cucurbita moschata] >XP_023546514.1 GTP-...	[more]
XP_022131431.1	9.7e-123	98.19	GTP-binding nuclear protein Ran-3-like [Momordica charantia]	[more]

BLAST of ClCG08G013110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	1.3e-122	95.48	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41918	1.9e-121	94.12	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
P41917	3.2e-121	94.12	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P38546	7.2e-121	94.57	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]
P38548	2.7e-120	93.21	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1	[more]

BLAST of ClCG08G013110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A068PVW7	3.5e-126	100.00	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan2 PE=2 SV=1	[more]
A0A0A0LLW2	9.5e-124	97.74	GTP-binding nuclear protein OS=Cucumis sativus OX=3659 GN=Csa_2G380000 PE=3 SV=1	[more]
A0A1S3BCW9	9.5e-124	97.74	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103488283 PE=3 SV=1	[more]
A0A6J1K7U8	1.2e-123	98.19	GTP-binding nuclear protein OS=Cucurbita maxima OX=3661 GN=LOC111491953 PE=3 SV=...	[more]
A0A6J1HAZ9	3.6e-123	97.74	GTP-binding nuclear protein OS=Cucurbita moschata OX=3662 GN=LOC111462434 PE=3 S...	[more]

BLAST of ClCG08G013110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	9.4e-124	95.48	RAN GTPase 3	[more]
AT5G20020.1	2.3e-122	94.12	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	5.7e-121	93.21	RAS-related nuclear protein-1	[more]
AT5G55080.1	2.8e-83	69.34	ras-related nuclear protein 4	[more]
AT4G39890.1	1.2e-22	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 168..190 score: 74.25 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 27..41 score: 95.13
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 29.927345
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..175 e-value: 8.3E-9 score: -5.9
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 4.1E-50 score: 169.6
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..205 score: 9.546956
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 2.6E-28 score: 110.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 4.0E-18 score: 76.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 1.8E-165 score: 565.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..221
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..210 score: 19.903856
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 2.19949E-132 score: 367.397
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 1.3E-24 score: 84.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..219 e-value: 3.2E-69 score: 234.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G013110.2	ClCG08G013110.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding