ClCG08G013010 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G013010
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionV-type proton ATPase subunit c''1
LocationCG_Chr08: 25908834 .. 25910683 (+)
RNA-Seq ExpressionClCG08G013010
SyntenyClCG08G013010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATGGTAGAGAATAAAAATTTCAACTTTCAATTTCATAAAAATATATAAATAATTAATTAATTAAAAAGAAAAAAAAAATCTCACGCGCGTGGACGTTTCTCAATACTCATCCGTCGATCTCCACAATTTTCAGATCAAGAACTCTATTCCTCCAGGGTTCACACCGGCGGATTTCAGATCAAATCCAACCCCTTTCCGATTATTACTGCGTCCATTTCAGAATTAAGGTCGGAGATTCATAGGTCATCATGTCCAGCGCCGCCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATATCTCCGTACACCTTCTCCGCCATCGGTATCGCCATCGCCATTGGGGTTTCCGTCCTCGGCGCCGCCTGGTATCTTATTCAGCACTCTTTGTGTTTCTCTTGATGAATGTTTATTTTGTTGATTTCCTTTCTGAATTATGAGAATTTGCGCGGTTGCGAATTTGGTAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGCCCTAACTTTAGTTGATGAATTGTTCGTTTTACTTTTGATTGGATTGCTACTTTTGGTCGGGTCCGGATACATATTTTGGGATTCTTATTGCTTAATTCTTGAAGTAATACAACCGAGAACGAAGAAACTCGTAAGGCTTCTTTAGAATTTTGAATCAATAAGAACAGAATTGAGCGCGAGCCTAGTGTTTCTGAAAAAAAAAAAAATTGTTGAATGTAGTAAATTCCTTATTATTTTTTTTTTGGAAAATCCCTTCTAGCGTTTGCCTCTACCATATTAAATGGTCATCAAGTTTCATTGATGAATTTATGCATTAAGCTACATTTCTCTGGTGATTACTTTGATGATTATAACAACTTCAATGTTGTGTTCTTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAAACCAAGTTAGAGAGCGTGTCAGCATCTCAGATATATGCACCTGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGTTTGTTGCCTTCTCTCTTACTTTGTTTTTTCAATCAAAATCCTCAAATTTGGTTATTTTAAAAGTCGTTTACTTCCCAGTTTGATTGTTTGTTCTGAATCTTTTCTGATGCTTTGTTTCAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTCGTGAAGATTCTTGTAATTGAGATCTTTGGCAGTGCACTTGGGTTGTTTGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAATGGTCTGCCTCTTGGATTTCGAACACGAGATGTTAAGTTCCATTACGATGGGAAGGGTAACTTGTTTTTCGACTCTTGAGCTCTGTAGTTTGCCCCTTTGATAGATAATGATATTCTTGTAAAAGCTAGAGTGGGAAGTTTGTATGCATCTTTTAATTGTCTGGCTTTTGATCCTCTTCCCTTGGAAAACCATTTCTTCATTCTGATGTTGGTTTTAAATAATTTTCTTTTTGCCTTCCTTTTCATGGGAAAACGTCTTTATATTATATTGTTCTGGATATTTGAAAATACTGGAAATATTCAATAAGTTACAGGAGGAAGCCAATGTAGTAGGATTGCTTCTTTTCCCAGACATGTGTAACATAGTTTCTTGCAAAATAGCTTGCATTTACTTCTTGAATCTTTGTTGAATAAATGATATTCTTGATATTTATTGTTCCTTTA

mRNA sequence

ATATGGTAGAGAATAAAAATTTCAACTTTCAATTTCATAAAAATATATAAATAATTAATTAATTAAAAAGAAAAAAAAAATCTCACGCGCGTGGACGTTTCTCAATACTCATCCGTCGATCTCCACAATTTTCAGATCAAGAACTCTATTCCTCCAGGGTTCACACCGGCGGATTTCAGATCAAATCCAACCCCTTTCCGATTATTACTGCGTCCATTTCAGAATTAAGGTCGGAGATTCATAGGTCATCATGTCCAGCGCCGCCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATATCTCCGTACACCTTCTCCGCCATCGGTATCGCCATCGCCATTGGGGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAAACCAAGTTAGAGAGCGTGTCAGCATCTCAGATATATGCACCTGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTCGTGAAGATTCTTGTAATTGAGATCTTTGGCAGTGCACTTGGGTTGTTTGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAATGGTCTGCCTCTTGGATTTCGAACACGAGATGTTAAGTTCCATTACGATGGGAAGGGTAACTTGTTTTTCGACTCTTGAGCTCTGTAGTTTGCCCCTTTGATAGATAATGATATTCTTGTAAAAGCTAGAGTGGGAAGTTTGTATGCATCTTTTAATTGTCTGGCTTTTGATCCTCTTCCCTTGGAAAACCATTTCTTCATTCTGATGTTGGTTTTAAATAATTTTCTTTTTGCCTTCCTTTTCATGGGAAAACGTCTTTATATTATATTGTTCTGGATATTTGAAAATACTGGAAATATTCAATAAGTTACAGGAGGAAGCCAATGTAGTAGGATTGCTTCTTTTCCCAGACATGTGTAACATAGTTTCTTGCAAAATAGCTTGCATTTACTTCTTGAATCTTTGTTGAATAAATGATATTCTTGATATTTATTGTTCCTTTA

Coding sequence (CDS)

ATGTCCAGCGCCGCCGTGCTTGCACGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATATCTCCGTACACCTTCTCCGCCATCGGTATCGCCATCGCCATTGGGGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATATGGTGTCATTGTTGCCATTATCTTACAAACCAAGTTAGAGAGCGTGTCAGCATCTCAGATATATGCACCTGAGTCTCTAAGAGCAGGATATGCAATTTTTGCATCTGGAATCATAGTTGGCTTTGCAAACCTTGTCTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTCGTGAAGATTCTTGTAATTGAGATCTTTGGCAGTGCACTTGGGTTGTTTGGAGTGATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAA

Protein sequence

MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKRG
Homology
BLAST of ClCG08G013010 vs. NCBI nr
Match: XP_038885623.1 (V-type proton ATPase subunit c''1 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.1e-85
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSA VLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 324.7 bits (831), Expect = 5.1e-85
Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. NCBI nr
Match: XP_004138742.1 (V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_021826 [Cucumis sativus])

HSP 1 Score: 322.0 bits (824), Expect = 3.3e-84
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. NCBI nr
Match: XP_022962488.1 (V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-type proton ATPase subunit c''1-like [Cucurbita maxima] >KAG6598594.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029527.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.6e-83
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSA ++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of ClCG08G013010 vs. NCBI nr
Match: XP_022951859.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type proton ATPase subunit c''2 [Cucurbita maxima] >XP_023536708.1 V-type proton ATPase subunit c''2-like [Cucurbita pepo subsp. pepo] >KAG6585444.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020363.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.6e-83
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AAV+A SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of ClCG08G013010 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 2.0e-76
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

BLAST of ClCG08G013010 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-75
Identity = 156/177 (88.14%), Postives = 166/177 (93.79%), Query Frame = 0

Query: 4   AAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           VCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

BLAST of ClCG08G013010 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46
Identity = 94/165 (56.97%), Postives = 135/165 (81.82%), Query Frame = 0

Query: 12  SWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVI 71
           ++ + L+  SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+I
Sbjct: 46  NFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISII 105

Query: 72  FCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGI 131
           FCE VAIYG+I+AI+  +KL   +A  +Y+  +L  GY++F +GI VG +NL+CG+ VGI
Sbjct: 106 FCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGI 165

Query: 132 IGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQAS 177
            G++ A+SDA +S+LFVKILVIEIFGS LGL G+IVG++M+ +AS
Sbjct: 166 TGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210

BLAST of ClCG08G013010 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-44
Identity = 94/160 (58.75%), Postives = 127/160 (79.38%), Query Frame = 0

Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA++  A    +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

BLAST of ClCG08G013010 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.9e-44
Identity = 93/160 (58.13%), Postives = 126/160 (78.75%), Query Frame = 0

Query: 17  LINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAV 76
           L   SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCEAV
Sbjct: 41  LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAV 100

Query: 77  AIYGVIVAIILQTKLESVSAS--QIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGS 136
           AIYG+I+AI++    E  SA+  +     +  AGY++F +G+ VG +NL CG+CVGI+GS
Sbjct: 101 AIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGS 160

Query: 137 SCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQ 175
             AL+DAQN SLFVKIL++EIFGSA+GLFGVIV I+ +++
Sbjct: 161 GAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200

BLAST of ClCG08G013010 vs. ExPASy TrEMBL
Match: A0A5A7V9W8 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002840 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85
Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. ExPASy TrEMBL
Match: A0A1S3BBZ9 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.5e-85
Identity = 180/182 (98.90%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AAVLARSSSWARAL+NISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVLARSSSWARALVNISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. ExPASy TrEMBL
Match: A0A0A0LQ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 179/182 (98.35%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+A VL RSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
           RG
Sbjct: 181 RG 182

BLAST of ClCG08G013010 vs. ExPASy TrEMBL
Match: A0A6J1KLI7 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS+AAV+A SSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSTAAVIAHSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of ClCG08G013010 vs. ExPASy TrEMBL
Match: A0A6J1K5F4 (V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC111491843 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83
Identity = 176/182 (96.70%), Postives = 180/182 (98.90%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MSSA ++ARSSSW+RALINISPYTFSA+GIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP
Sbjct: 1   MSSAVLVARSSSWSRALINISPYTFSAVGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180

Query: 181 RG 183
            G
Sbjct: 181 TG 182

BLAST of ClCG08G013010 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 286.6 bits (732), Expect = 1.4e-77
Identity = 158/180 (87.78%), Postives = 167/180 (92.78%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 180
           ANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 121 ANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 180

BLAST of ClCG08G013010 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-76
Identity = 156/177 (88.14%), Postives = 166/177 (93.79%), Query Frame = 0

Query: 4   AAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRIT 63
           + V   +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+APRIT
Sbjct: 2   SGVAIHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAPRIT 61

Query: 64  SKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANL 123
           SKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGFANL
Sbjct: 62  SKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGFANL 121

Query: 124 VCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 181
           VCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 122 VCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 178

BLAST of ClCG08G013010 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 270.8 bits (691), Expect = 8.1e-73
Identity = 158/210 (75.24%), Postives = 167/210 (79.52%), Query Frame = 0

Query: 1   MSSAAVLARSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAP 60
           MS    L  +SSW  AL+ ISPYTFSAIGIAI+IGVSVLGAAWGIYITGSSLIGAAI+AP
Sbjct: 1   MSGVVALGHASSWGAALVRISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIEAP 60

Query: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGF 120
           RITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  ESLRAGYAIFASGIIVGF
Sbjct: 61  RITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAESLRAGYAIFASGIIVGF 120

Query: 121 ANLVCG------------------------------LCVGIIGSSCALSDAQNSSLFVKI 180
           ANLVCG                              LCVGIIGSSCALSDAQNS+LFVKI
Sbjct: 121 ANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIGSSCALSDAQNSTLFVKI 180

BLAST of ClCG08G013010 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0

Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 15  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 74

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 75  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 134

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 135 KLFVGMILILIFAEALALYGLIVGIILSSRA 160

BLAST of ClCG08G013010 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 53/151 (35.10%), Postives = 88/151 (58.28%), Query Frame = 0

Query: 25  FSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVA 84
           F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+    + IYG+I+A
Sbjct: 14  FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIA 73

Query: 85  IILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS 144
           +I+ T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ  
Sbjct: 74  VIISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQP 133

Query: 145 SLFVKILVIEIFGSALGLFGVIVGIIMSAQA 176
            LFV +++I IF  AL L+G+IVGII+S++A
Sbjct: 134 KLFVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038885623.15.1e-8599.45V-type proton ATPase subunit c''1 [Benincasa hispida][more]
XP_008445147.15.1e-8598.90PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type... [more]
XP_004138742.13.3e-8498.35V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical pro... [more]
XP_022962488.13.6e-8396.70V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-ty... [more]
XP_022951859.13.6e-8396.70V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type pr... [more]
Match NameE-valueIdentityDescription
Q9SZY72.0e-7687.78V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE... [more]
Q9SLA21.7e-7588.14V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE... [more]
P239683.7e-4656.97V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508... [more]
Q91V373.5e-4458.75V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6... [more]
Q2TA245.9e-4458.13V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B... [more]
Match NameE-valueIdentityDescription
A0A5A7V9W82.5e-8598.90V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A1S3BBZ92.5e-8598.90V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S... [more]
A0A0A0LQ281.6e-8498.35Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1[more]
A0A6J1KLI71.8e-8396.70V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE... [more]
A0A6J1K5F41.8e-8396.70V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC1114918... [more]
Match NameE-valueIdentityDescription
AT4G32530.11.4e-7787.78ATPase, F0/V0 complex, subunit C protein [more]
AT2G25610.11.2e-7688.14ATPase, F0/V0 complex, subunit C protein [more]
AT4G32530.28.1e-7375.24ATPase, F0/V0 complex, subunit C protein [more]
AT1G75630.11.4e-1635.10vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 [more]
AT1G19910.11.4e-1635.10ATPase, F0/V0 complex, subunit C protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000245V-ATPase proteolipid subunitPRINTSPR00122VACATPASEcoord: 67..91
score: 34.11
coord: 123..149
score: 35.96
coord: 41..65
score: 23.26
coord: 150..173
score: 47.15
IPR002379V-ATPase proteolipid subunit C-like domainPFAMPF00137ATP-synt_Ccoord: 28..87
e-value: 1.1E-14
score: 54.5
coord: 112..171
e-value: 8.8E-10
score: 38.8
NoneNo IPR availableGENE3D1.20.120.610coord: 23..177
e-value: 3.6E-52
score: 178.0
NoneNo IPR availablePANTHERPTHR10263V-TYPE PROTON ATPASE PROTEOLIPID SUBUNITcoord: 4..179
NoneNo IPR availablePANTHERPTHR10263:SF56V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNITcoord: 4..179
NoneNo IPR availableCDDcd18178ATP-synt_Vo_c_ATP6F_rpt2coord: 107..171
e-value: 8.21258E-25
score: 89.4883
NoneNo IPR availableCDDcd18177ATP-synt_Vo_c_ATP6F_rpt1coord: 25..87
e-value: 9.34008E-26
score: 91.9403
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 104..172
IPR035921F/V-ATP synthase subunit C superfamilySUPERFAMILY81333F1F0 ATP synthase subunit Ccoord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G013010.1ClCG08G013010.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function GO:0015078 proton transmembrane transporter activity