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ClCG08G011450 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCATTTTTAAAACGAGTTTCGATTAGAAGTTTCCCAATGGGAGGAAGGAGAAAGGAGGGAGGAATGCCCTAGAAAATGCCTTTTTATATGACTTCCTTCTCCCCACCCCTCTCTTCGCCTCAACCTCTCTTCACACCAATTCCAGAATTCAATTTTCACACAACAATTCCAATCATGGGAACCCACGCTAAACTCCTCATAAAGCCTAGATTTCTTTGCCTCCATGGCTTCCGTACCAGTGCAGCTATCCTCAAGAAGCAGGTCGGAAAATGGCCGGCTTCTGTCCTCGATCAACTCGATCTCCATTTTCTCGACGCTCCATTTCCTGCCGAAGGAAAATCCGACGTCGAAGGAATTTTCGATCCTCCTTATTTCGAGTGGTTTCAATTCAGTCCAGTACGATTGTTTCACCTAAGTTTCTATTTCTTTGCAAATTCACAAACTCTCTTTTCATTTGTTTATTTTCTCCCTTCCTCTCCATCTCAGGAATTTACAGAATATAGGAATTTCGACGAATGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGTAATTTCCTCTATTCTTTTGCTAATTAGCCAAACGGATCTTAGTCGATTATCAATTTCTAGTTGAATTTCGTTGAATTTCAAAATTTCAGGGGGCGATATTATCGGCCGCTCTGCCGGGATTTCAAGCCAAGGTAACCTAACAGTAACAGCAGCTTGCTCTGCTATTGGCTTTTACATATATTCCATCTGAATTCTCCGAAATTGAGATTCTGACGCGGCGGTGGCGTCGATAAATGGTTGCAGGGAATTGCTCTGACGAAAGTCCCGAAGATCAAATTCGTGATCATCATCAGCGGTGCGAAATTCAGATCCGAATCTGTGGCTGAGAAAGCTTACTCGACGCTCATTGGATGCCCATCCCTCCATTTTCTAGGTACCTCCACTTGCTTTTTTGTCCTTTTAGAAAGACATATACTCTGCATTTTCAAATATTCTGATTCTTTCCATTGTTAATGTAAACAAGCAAACCAACCACTGAACGCATAATTTTAGGGCCTTCTTTCTCAAATTTTGTCGTTAACCTACAATTTTCTCCGATATATTTAGTTTCATAATAAATAAGAACGCGTCTTAATTAATTAAATTTGGTCCAATTTATAATTTTTTTATTACTTTTTTACTTAAACAAGTTTGGATCAAGAATCAATCCATTAATATTTCAGAATATAATTAGTGTCTTTCCTATTTAGCTATGATGGGATTGATTCTTCAAATTGAGGAGCTATACTCAAATTTGAATTGATTTTTATTTTCTTTTGAAAATGTGAATGGACAATACTTTGATTGTGATCTATAAAAGGAAAAAAAGTTGATTTATATGAAATTGTAACGTTTGAAATTTGAAATTAATGATTGTACTTTGAAATTGCTAATAATACCAATTAAAGATTTTAAAGTTTTATAAATAAATCAATTAAGACATTTGTTATAATTTTGTTATAAAAGCGTACATCACTTCACGCTTATAAACGACTTCTTGCAAGGGTTGACGTAAATTAGAGAAAAAAGCTGAAATCAAATAAATTGTAGTGGTTTTTCAACAATATAAGTAGTTTTCTTCTTCTCGTCTTTCTCTATTTTTCTATTTAATATTTCGAGTTATTTTTGTAAGATTTTGAGAAAAAAAATAATTTATAAATAAAATTGGGCTAATTTATAATGGAATTAAGTTGAAATAAGTAGATGCCATTATTATTATTTTTTTTCTAAACTAAAGTTATATGAAATGTTTACTGGCAACTTTAATTCTAAAATTATAATTAAAATTTGAATTATTTAATCAACTTCTCAAACCTATGCTGAGAGAGATTATTAAAATTATGGTGGCAGGTGAGGAAGACTTCTTAATGCCCCATGGACAAAAGCTTCTGGAATCATATATAGATCCAACTGTAATTAATCATCCTAAAGGCCATACAGTTCCAAGATTAGGTAATACATAATTTCAACTAATTTCACTTTTACTTATATATATATATATATATATATATATATATATATATATATATATATATTTTCTTAATTTCTTATGCTAATTTAGATTATATCAACTTTATACTTTTAGATGATAAAGCTTTGGAGATTATGGAGAGTTTCATTCAGAGGATTTCAAAGACATTAGATGAGACTGAAGAATAGTAGTCTGACGTTTCATTGGACTATCAATTATGCATTTTTACTCTTAGGACAAAAGGTTACCAAAGAATAAGAATGATGATGATAGATCGTGTAATCCTATTTCATTTTTATGGTCACATGTATAATAATTTTTTCCCTCGTGTAGGGACGATTTTAGTCTTCTCCCTATGTCATCGTACTTTCAATAAATATAAAAATTAATTAATCTGTATCAGTAGTTTAATTATGGTCAACTTCTTTCAAAAAC GCCATTTTTAAAACGAGTTTCGATTAGAAGTTTCCCAATGGGAGGAAGGAGAAAGGAGGGAGGAATGCCCTAGAAAATGCCTTTTTATATGACTTCCTTCTCCCCACCCCTCTCTTCGCCTCAACCTCTCTTCACACCAATTCCAGAATTCAATTTTCACACAACAATTCCAATCATGGGAACCCACGCTAAACTCCTCATAAAGCCTAGATTTCTTTGCCTCCATGGCTTCCGTACCAGTGCAGCTATCCTCAAGAAGCAGGTCGGAAAATGGCCGGCTTCTGTCCTCGATCAACTCGATCTCCATTTTCTCGACGCTCCATTTCCTGCCGAAGGAAAATCCGACGTCGAAGGAATTTTCGATCCTCCTTATTTCGAGTGGTTTCAATTCAGTCCAGAATTTACAGAATATAGGAATTTCGACGAATGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATATTATCGGCCGCTCTGCCGGGATTTCAAGCCAAGGGAATTGCTCTGACGAAAGTCCCGAAGATCAAATTCGTGATCATCATCAGCGGTGCGAAATTCAGATCCGAATCTGTGGCTGAGAAAGCTTACTCGACGCTCATTGGATGCCCATCCCTCCATTTTCTAGGTGAGGAAGACTTCTTAATGCCCCATGGACAAAAGCTTCTGGAATCATATATAGATCCAACTGTAATTAATCATCCTAAAGGCCATACAGTTCCAAGATTAGATGATAAAGCTTTGGAGATTATGGAGAGTTTCATTCAGAGGATTTCAAAGACATTAGATGAGACTGAAGAATAGTAGTCTGACGTTTCATTGGACTATCAATTATGCATTTTTACTCTTAGGACAAAAGGTTACCAAAGAATAAGAATGATGATGATAGATCGTGTAATCCTATTTCATTTTTATGGTCACATGTATAATAATTTTTTCCCTCGTGTAGGGACGATTTTAGTCTTCTCCCTATGTCATCGTACTTTCAATAAATATAAAAATTAATTAATCTGTATCAGTAGTTTAATTATGGTCAACTTCTTTCAAAAAC ATGCCTTTTTATATGACTTCCTTCTCCCCACCCCTCTCTTCGCCTCAACCTCTCTTCACACCAATTCCAGAATTCAATTTTCACACAACAATTCCAATCATGGGAACCCACGCTAAACTCCTCATAAAGCCTAGATTTCTTTGCCTCCATGGCTTCCGTACCAGTGCAGCTATCCTCAAGAAGCAGGTCGGAAAATGGCCGGCTTCTGTCCTCGATCAACTCGATCTCCATTTTCTCGACGCTCCATTTCCTGCCGAAGGAAAATCCGACGTCGAAGGAATTTTCGATCCTCCTTATTTCGAGTGGTTTCAATTCAGTCCAGAATTTACAGAATATAGGAATTTCGACGAATGTCTCTCATTCATTGAGGATTACATGCTTAAGCACGGACCATTCGATGGATTCCTCGGTTTCTCACAGGGGGCGATATTATCGGCCGCTCTGCCGGGATTTCAAGCCAAGGGAATTGCTCTGACGAAAGTCCCGAAGATCAAATTCGTGATCATCATCAGCGGTGCGAAATTCAGATCCGAATCTGTGGCTGAGAAAGCTTACTCGACGCTCATTGGATGCCCATCCCTCCATTTTCTAGGTGAGGAAGACTTCTTAATGCCCCATGGACAAAAGCTTCTGGAATCATATATAGATCCAACTGTAATTAATCATCCTAAAGGCCATACAGTTCCAAGATTAGATGATAAAGCTTTGGAGATTATGGAGAGTTTCATTCAGAGGATTTCAAAGACATTAGATGAGACTGAAGAATAG MPFYMTSFSPPLSSPQPLFTPIPEFNFHTTIPIMGTHAKLLIKPRFLCLHGFRTSAAILKKQVGKWPASVLDQLDLHFLDAPFPAEGKSDVEGIFDPPYFEWFQFSPEFTEYRNFDECLSFIEDYMLKHGPFDGFLGFSQGAILSAALPGFQAKGIALTKVPKIKFVIIISGAKFRSESVAEKAYSTLIGCPSLHFLGEEDFLMPHGQKLLESYIDPTVINHPKGHTVPRLDDKALEIMESFIQRISKTLDETEE Homology
BLAST of ClCG08G011450 vs. NCBI nr
Match: XP_008444882.1 (PREDICTED: dihydrofolate reductase-like [Cucumis melo]) HSP 1 Score: 447.2 bits (1149), Expect = 9.5e-122 Identity = 219/251 (87.25%), Postives = 235/251 (93.63%), Query Frame = 0
BLAST of ClCG08G011450 vs. NCBI nr
Match: XP_038885360.1 (dihydrofolate reductase-like [Benincasa hispida]) HSP 1 Score: 445.3 bits (1144), Expect = 3.6e-121 Identity = 213/236 (90.25%), Postives = 224/236 (94.92%), Query Frame = 0
BLAST of ClCG08G011450 vs. NCBI nr
Match: XP_004152614.1 (dihydrofolate reductase [Cucumis sativus]) HSP 1 Score: 443.0 bits (1138), Expect = 1.8e-120 Identity = 218/251 (86.85%), Postives = 229/251 (91.24%), Query Frame = 0
BLAST of ClCG08G011450 vs. NCBI nr
Match: XP_023545459.1 (dihydrofolate reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 427.2 bits (1097), Expect = 1.0e-115 Identity = 209/251 (83.27%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of ClCG08G011450 vs. NCBI nr
Match: KAA0065116.1 (dihydrofolate reductase-like [Cucumis melo var. makuwa]) HSP 1 Score: 426.8 bits (1096), Expect = 1.3e-115 Identity = 202/222 (90.99%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy Swiss-Prot
Match: P36591 (Dihydrofolate reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dfr1 PE=2 SV=2) HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18 Identity = 64/204 (31.37%), Postives = 96/204 (47.06%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy Swiss-Prot
Match: Q7QBJ0 (Esterase AGAP003155 OS=Anopheles gambiae OX=7165 GN=AGAP003155 PE=3 SV=3) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 66/224 (29.46%), Postives = 102/224 (45.54%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy Swiss-Prot
Match: Q0C7C4 (Esterase AAEL000016 OS=Aedes aegypti OX=7159 GN=AAEL000016 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.2e-15 Identity = 66/225 (29.33%), Postives = 103/225 (45.78%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy Swiss-Prot
Match: Q94AC1 (Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=STR6 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14 Identity = 66/217 (30.41%), Postives = 96/217 (44.24%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy Swiss-Prot
Match: Q9VDL1 (Esterase CG5412 OS=Drosophila melanogaster OX=7227 GN=CG5412 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 5.2e-14 Identity = 63/224 (28.12%), Postives = 98/224 (43.75%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy TrEMBL
Match: A0A1S3BC97 (dihydrofolate reductase-like OS=Cucumis melo OX=3656 GN=LOC103488098 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 4.6e-122 Identity = 219/251 (87.25%), Postives = 235/251 (93.63%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy TrEMBL
Match: A0A0A0LNX4 (FSH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G369800 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 8.7e-121 Identity = 218/251 (86.85%), Postives = 229/251 (91.24%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy TrEMBL
Match: A0A5A7VFL2 (Dihydrofolate reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004510 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 6.4e-116 Identity = 202/222 (90.99%), Postives = 214/222 (96.40%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy TrEMBL
Match: A0A6J1K928 (dihydrofolate reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111492210 PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115 Identity = 208/251 (82.87%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of ClCG08G011450 vs. ExPASy TrEMBL
Match: A0A6J1HF66 (dihydrofolate reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111462484 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 5.4e-115 Identity = 207/251 (82.47%), Postives = 225/251 (89.64%), Query Frame = 0
BLAST of ClCG08G011450 vs. TAIR 10
Match: AT4G24380.1 (INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 304.3 bits (778), Expect = 9.2e-83 Identity = 143/223 (64.13%), Postives = 177/223 (79.37%), Query Frame = 0
BLAST of ClCG08G011450 vs. TAIR 10
Match: AT5G65400.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 276.2 bits (705), Expect = 2.7e-74 Identity = 129/214 (60.28%), Postives = 161/214 (75.23%), Query Frame = 0
BLAST of ClCG08G011450 vs. TAIR 10
Match: AT4G24380.2 (CONTAINS InterPro DOMAIN/s: Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G65400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 241.1 bits (614), Expect = 9.6e-64 Identity = 114/166 (68.67%), Postives = 134/166 (80.72%), Query Frame = 0
BLAST of ClCG08G011450 vs. TAIR 10
Match: AT1G09280.1 (CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645); BEST Arabidopsis thaliana protein match is: Rhodanese/Cell cycle control phosphatase superfamily protein (TAIR:AT2G40760.1); Has 5925 Blast hits to 5912 proteins in 1592 species: Archae - 0; Bacteria - 2946; Metazoa - 156; Fungi - 408; Plants - 229; Viruses - 0; Other Eukaryotes - 2186 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 7.5e-16 Identity = 66/217 (30.41%), Postives = 96/217 (44.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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