ClCG08G011420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G011420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr08: 24171301 .. 24173607 (+)
RNA-Seq Expression	ClCG08G011420
Synteny	ClCG08G011420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAGTCCTCCCACAGACCGGGCCTCTGGGGGTTTATTGAGTTATGCTTGTGTTATGCATCGCTCAGTAATGGTATGGGGATCGCTTTTTTGGGGGTTTAAGTCATAAAGAAGAAATATGGAACGGCGCTGATTAACAAGGCGTTAAGCCGCTGGTTTAGGGCAATATTTATAACATCGGTTTTTCTGGACCCACAAAAGGGACGACCATGATATTCCTTCGCGCCAATGCGCAAGCAAAGCAATCGATGACGCGGTGGCTTCGCGCTTCAGAGGTCGCCGCTCGAACGGAATCGGTGATGACGAGGTCTCTCCGCTCCGGCACCGGACGGTAAGCTTTGTACTTTTACCTCTCTGTTTCCCTTGCTAAGAACTTCGAGTTTCATCGTTTCATTGTCCACTTCTGTTCTGAACCAAAGAGTTGTTGATTCTATAAACACAGAATTCACTTCCCTCTCCAAGCATGGAGGCCTAGATCGTCACTTACTTCGCCAGTCGACTCAATGGACACCATTTCTGCTGTATCCTCCAAAACCCTACAAAACGGTAGCGACGATGGCAACTCCAATCAGGAATTTATGAAGCTCAAATTACCTCGGAATAGTGTGACCACCGTGCTTCAGAATGGCAACTGTGAAGCTCAAAGGACCTCAATCACTAAGCTTCGGCGTGTTGTCAAGAAACTCTGCAAATCGAAGCGCTTTGAGCGTGCGCTAGAGGTTGGCAACAAACAATTTGGAAATTGAAATTTCTTACTTCATTTTTATGCCATCTGAAGAATAAAATCAAGATCAGAAAGATTGCATCTCACTATATAATTCATAGATTCCTGTTGTAACATGTAGAATGCAATACATTCTTACATTCAGGTACTAATGTCGATGGAAACTCGAGATAATTTGCGTATGACCCCGGCTGAACATGCTCTCCGATTGGAATTGACAATCAAAGTGCACGGTTTACTGAAAGCTGAAGATTACTTCGATCAATTGCCCACCATAACCTCTAAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGAGAGGAACACAGAAAAAGCTGAGGCTTTCATGGTGAAGCTAAGGGACTTGGGACTGGTTGTGAACCATCATCTTTACAATGAGATGATGAAACTATATGTAGCCACATCTCAAAATGAAAAAGTTCCTCTTGTTATAAGGGACATGAAGCAAAATCAAATACAGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGTAATGAGGTATATGGGGTTGGGTCAGTGGAGTTGGTATTTGAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACTCTGTCTACCCTGGCTAAAGTTTACATACAGGAAGGCCTTGTTGACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTAATCACATTATATGCCTCTTTGAAGGATAAGAAGGGAGTTTTTCGAGTTTGGAGAGCTAGTAAAGCTGTAAATGGCAGACCCACTTGTGCTAATTACATGTGTATACTGCTGTGTTTGGTGAAGGTAGGAGAGATAGATGAGGCAGAGAAAGTATTCAAGGAATGGGAGTTGAATTGTCGTAACTATGACATTAGAGTTTCCAATGTTCTTTTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAAGCCGAGTCATTGCATATGCGCACACTGGGGAGAGGTGGTAGTCCAAATTATAAAACATGGGAGATTCTCATGGAGGGGTGGGTGAGGAGCCAACAAAACGTGGATGGAGCTATTAATTTTCTGAGAAAGATTTTGCTTCATTGATAGTCATCGTTAAAGTCTGTCACTCCCTTTTTTTGTCCAACCGAGCAAAGATTGTTGGATAAAGCACTAATTACTATTTTAAATGTTGATGGTTTGATTGCTCGTTCAACCATTGTTCAGCTCAAAAAGTTCTCACTTTCTGTAATGGCTATGGCATATTGTTTTGAGAATCATGAAGTGTGGGAACCTCCAATTTATGAGTCATCGACCTTTTTGGTTTTGTGCTTGTACATTGAAGTGAAGGCTTCTGGCATCCTTCAAAAATGTTGGGCCATTTCCTTGCCATGTCCTAGCCTCAGATGAAGGGAAACAGGAGACCTTTTTTTGGACTATTTATCTATTTGTTGACGAAGGATTTAATAAGACTATCTGTGTAGATGATCCATCCAAATTGGGAAGAAGATCATTTGAAGAGGGAGGAAGCTGTTGAAGGTGACGTGTTTTATCTCGACATCATGTGA

mRNA sequence

ATGCTCAGTCCTCCCACAGACCGGGCCTCTGGGGGTTTATTGAGTTATGCTTGTGTTATGCATCGCTCAGTAATGGGCAATATTTATAACATCGGTTTTTCTGGACCCACAAAAGGGACGACCATGATATTCCTTCGCGCCAATGCGCAAGCAAAGCAATCGATGACGCGGTGGCTTCGCGCTTCAGAGGTCGCCGCTCGAACGGAATCGGTGATGACGAGGTCTCTCCGCTCCGGCACCGGACGAATTCACTTCCCTCTCCAAGCATGGAGGCCTAGATCGTCACTTACTTCGCCAGTCGACTCAATGGACACCATTTCTGCTGTATCCTCCAAAACCCTACAAAACGGTAGCGACGATGGCAACTCCAATCAGGAATTTATGAAGCTCAAATTACCTCGGAATAGTGTGACCACCGTGCTTCAGAATGGCAACTGTGAAGCTCAAAGGACCTCAATCACTAAGCTTCGGCGTGTTGTCAAGAAACTCTGCAAATCGAAGCGCTTTGAGCGTGCGCTAGAGGTACTAATGTCGATGGAAACTCGAGATAATTTGCGTATGACCCCGGCTGAACATGCTCTCCGATTGGAATTGACAATCAAAGTGCACGGTTTACTGAAAGCTGAAGATTACTTCGATCAATTGCCCACCATAACCTCTAAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGAGAGGAACACAGAAAAAGCTGAGGCTTTCATGGTGAAGCTAAGGGACTTGGGACTGGTTGTGAACCATCATCTTTACAATGAGATGATGAAACTATATGTAGCCACATCTCAAAATGAAAAAGTTCCTCTTGTTATAAGGGACATGAAGCAAAATCAAATACAGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGTAATGAGGTATATGGGGTTGGGTCAGTGGAGTTGGTATTTGAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACTCTGTCTACCCTGGCTAAAGTTTACATACAGGAAGGCCTTGTTGACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTAATCACATTATATGCCTCTTTGAAGGATAAGAAGGGAGTTTTTCGAGTTTGGAGAGCTAGTAAAGCTGTAAATGGCAGACCCACTTGTGCTAATTACATGTGTATACTGCTGTGTTTGGTGAAGGTAGGAGAGATAGATGAGGCAGAGAAAGTATTCAAGGAATGGGAGTTGAATTGTCGTAACTATGACATTAGAGTTTCCAATGTTCTTTTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAAGCCGAGTCATTGCATATGCGCACACTGGGGAGAGGTGGTAGTCCAAATTATAAAACATGGGAGATTCTCATGGAGGGGTGGATGATCCATCCAAATTGGGAAGAAGATCATTTGAAGAGGGAGGAAGCTGTTGAAGGTGACGTGTTTTATCTCGACATCATGTGA

Coding sequence (CDS)

ATGCTCAGTCCTCCCACAGACCGGGCCTCTGGGGGTTTATTGAGTTATGCTTGTGTTATGCATCGCTCAGTAATGGGCAATATTTATAACATCGGTTTTTCTGGACCCACAAAAGGGACGACCATGATATTCCTTCGCGCCAATGCGCAAGCAAAGCAATCGATGACGCGGTGGCTTCGCGCTTCAGAGGTCGCCGCTCGAACGGAATCGGTGATGACGAGGTCTCTCCGCTCCGGCACCGGACGAATTCACTTCCCTCTCCAAGCATGGAGGCCTAGATCGTCACTTACTTCGCCAGTCGACTCAATGGACACCATTTCTGCTGTATCCTCCAAAACCCTACAAAACGGTAGCGACGATGGCAACTCCAATCAGGAATTTATGAAGCTCAAATTACCTCGGAATAGTGTGACCACCGTGCTTCAGAATGGCAACTGTGAAGCTCAAAGGACCTCAATCACTAAGCTTCGGCGTGTTGTCAAGAAACTCTGCAAATCGAAGCGCTTTGAGCGTGCGCTAGAGGTACTAATGTCGATGGAAACTCGAGATAATTTGCGTATGACCCCGGCTGAACATGCTCTCCGATTGGAATTGACAATCAAAGTGCACGGTTTACTGAAAGCTGAAGATTACTTCGATCAATTGCCCACCATAACCTCTAAGAAAGCTTCATCTCTCCCTCTTCTTCATGGTTATGTCAAAGAGAGGAACACAGAAAAAGCTGAGGCTTTCATGGTGAAGCTAAGGGACTTGGGACTGGTTGTGAACCATCATCTTTACAATGAGATGATGAAACTATATGTAGCCACATCTCAAAATGAAAAAGTTCCTCTTGTTATAAGGGACATGAAGCAAAATCAAATACAGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGTAATGAGGTATATGGGGTTGGGTCAGTGGAGTTGGTATTTGAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACTCTGTCTACCCTGGCTAAAGTTTACATACAGGAAGGCCTTGTTGACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACAGGCTTGGATATTTCTTCTTAATCACATTATATGCCTCTTTGAAGGATAAGAAGGGAGTTTTTCGAGTTTGGAGAGCTAGTAAAGCTGTAAATGGCAGACCCACTTGTGCTAATTACATGTGTATACTGCTGTGTTTGGTGAAGGTAGGAGAGATAGATGAGGCAGAGAAAGTATTCAAGGAATGGGAGTTGAATTGTCGTAACTATGACATTAGAGTTTCCAATGTTCTTTTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAAGCCGAGTCATTGCATATGCGCACACTGGGGAGAGGTGGTAGTCCAAATTATAAAACATGGGAGATTCTCATGGAGGGGTGGATGATCCATCCAAATTGGGAAGAAGATCATTTGAAGAGGGAGGAAGCTGTTGAAGGTGACGTGTTTTATCTCGACATCATGTGA

Protein sequence

MLSPPTDRASGGLLSYACVMHRSVMGNIYNIGFSGPTKGTTMIFLRANAQAKQSMTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTLQNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILMEGWMIHPNWEEDHLKREEAVEGDVFYLDIM

Homology

[Close]

BLAST of ClCG08G011420 vs. NCBI nr
Match: XP_038885083.1 (pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida])

HSP 1 Score: 786.6 bits (2030), Expect = 1.3e-223
Identity = 401/437 (91.76%), Postives = 414/437 (94.74%), Query Frame = 0


Query: 42  MIFLRANAQAKQSMTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVD 101
           MI LRANAQAKQSMTRWLRASEVAARTESVM   LRSGT RIHF  QAW+P SSLTSPVD
Sbjct: 1   MILLRANAQAKQSMTRWLRASEVAARTESVMKAPLRSGTERIHFLFQAWKPISSLTSPVD 60

Query: 102 SMDTISAVSSKTLQNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVK 161
           S+  ISAVS KTLQN  DDGNS QEFMKLKLPR+SV+TVLQ+G CEAQRTSITKLRRVVK
Sbjct: 61  SLSNISAVSPKTLQNSVDDGNSKQEFMKLKLPRSSVSTVLQSGKCEAQRTSITKLRRVVK 120

Query: 162 KLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSK 221
           KL  SKRFERALEVLM METRDNLRM+PAEHALRLELTIKVHG+LKAE+YF+QLPTI S+
Sbjct: 121 KLYTSKRFERALEVLMLMETRDNLRMSPAEHALRLELTIKVHGVLKAEEYFNQLPTIASQ 180

Query: 222 KASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIR 281
           KASSLPLLHGYVK RNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIR
Sbjct: 181 KASSLPLLHGYVKGRNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIR 240

Query: 282 DMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQE 341
           DMKQNQIQRNVLSYNLWMNAC+EVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQE
Sbjct: 241 DMKQNQIQRNVLSYNLWMNACSEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQE 300

Query: 342 GLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANY 401
            LVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGV RVWRASKAV+GRPTCANY
Sbjct: 301 DLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVSRVWRASKAVSGRPTCANY 360

Query: 402 MCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLG 461
           MCILLCLVKVG+IDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHM TLG
Sbjct: 361 MCILLCLVKVGDIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLG 420

Query: 462 RGGSPNYKTWEILMEGW 479
           RGGSPNYKTWEILMEGW
Sbjct: 421 RGGSPNYKTWEILMEGW 437

[Close]

BLAST of ClCG08G011420 vs. NCBI nr
Match: XP_008444877.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Cucumis melo] >KAA0065119.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 726.1 bits (1873), Expect = 2.1e-205
Identity = 366/425 (86.12%), Postives = 388/425 (91.29%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MT WLRA EVAARTE VM   LRSGTGRI+F LQAWR  SSLTSPVDS+ T S VSSK L
Sbjct: 1   MTLWLRALEVAARTEPVMKMPLRSGTGRIYFLLQAWRSISSLTSPVDSLATNSVVSSKIL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           QNG DDGN  QEF KLKLPR SV TVLQ+GNCEAQRTSITKLR VVKK CK+KRFERAL+
Sbjct: 61  QNGGDDGNFKQEFRKLKLPRRSVNTVLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALK 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
            LM METRDN RM PAE+ALRLELTIK HGLLKAE+YF+QLPTI S+KASSLPLLHGYVK
Sbjct: 121 ALMLMETRDNFRMYPAEYALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC++VYGV S+ELVFEEMLTDKNVQVGWST+ TLAKVYIQEGLV+KAFAALK+A
Sbjct: 241 YNLWMNACSQVYGVRSIELVFEEMLTDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLSPC RLGYFFLITLYASLKDK+GV RVWRASKAV+G PTCANYMCILLCLVK+GE+
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEM 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           D+AEKVFKEWE NCRNYDIRVSNVLLGAYVRNGLLEKAESLH  TLGRGGSPNYKTWEIL
Sbjct: 361 DKAEKVFKEWEFNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEIL 420

Query: 475 MEGWM 480
           MEGW+
Sbjct: 421 MEGWV 425

[Close]

BLAST of ClCG08G011420 vs. NCBI nr
Match: XP_004152747.1 (pentatricopeptide repeat-containing protein At5g27460 [Cucumis sativus] >KGN62725.1 hypothetical protein Csa_021823 [Cucumis sativus])

HSP 1 Score: 707.2 bits (1824), Expect = 1.0e-199
Identity = 360/425 (84.71%), Postives = 382/425 (89.88%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MT+WLRA EVAARTE VM   LRSG GRI+F LQAWR  SS TS VDS+ T S VSSK L
Sbjct: 1   MTQWLRALEVAARTEPVMKMPLRSGIGRIYFLLQAWRSLSSPTSRVDSLATTSVVSSKIL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           QNG DDG   QEFMKLKLPR+SV TVL       QRTSITKLRRVVKK CKSKRFERALE
Sbjct: 61  QNGGDDGKFKQEFMKLKLPRSSVNTVL-------QRTSITKLRRVVKKFCKSKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
            L+ METRDN RM PAEHALRLELTIK HGLLKAE+YF+QLPTI S+KASSLPLLHGYVK
Sbjct: 121 ALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           ERNTEKAEAFMVKLRD GLVVNHHLYNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YGVGS+ELVFEEMLTDKNVQVGWST+ TLA VYIQEGLV+KAFAALK+A
Sbjct: 241 YNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLSPC RLGYFFLITLYASLKDK+GVFRVWRASKAV+G PTCANY+CILLCLVK+GEI
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEI 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           D+AEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLH  TLGRGG+PNYKTWEIL
Sbjct: 361 DKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEIL 418

Query: 475 MEGWM 480
           MEGW+
Sbjct: 421 MEGWV 418

[Close]

BLAST of ClCG08G011420 vs. NCBI nr
Match: XP_022997144.1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxima])

HSP 1 Score: 692.2 bits (1785), Expect = 3.4e-195
Identity = 351/423 (82.98%), Postives = 388/423 (91.73%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MTRWL ASEVAART+SVM  +LRSGTGRIHF L+AWRP SS TSPVDS D ISAVS KTL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           Q G D+GN  Q+FMKLK PR+SVTTVLQ+GN EAQRTSITKLRRVVKKLCKSKRFERALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
           VLM MET++ +RM+PA+HALRLELTIKVHGLLKAE++F+QLP I S+KASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           E+NTEKAEAFM KL+ LGLVV+ HLYNEMMKLYVATSQNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 EQNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YGVGSVELV+EEML+DKNVQVGWSTLSTLAKVY Q GLV KAFAAL++A
Sbjct: 241 YNLWMNACSELYGVGSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLS  NRLGYFFLITLYA+L DK+GV RVW ASKAV+ RPTCANYMCILLCLVK+G+I
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           +EAEK+FKEWEL+CRNYDIRVSNVLLGAYVRNGLL++AESLHM TL RGG+PNYKTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEIL 420

Query: 475 MEG 478
           MEG
Sbjct: 421 MEG 423

[Close]

BLAST of ClCG08G011420 vs. NCBI nr
Match: XP_023545813.1 (pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 688.7 bits (1776), Expect = 3.7e-194
Identity = 351/423 (82.98%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MTRWL ASEVAART SVM  +LRSGTGRIHF L+AWRP SS TSPVDS D ISAVS KTL
Sbjct: 1   MTRWLGASEVAARTNSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           Q G D+GN  Q+FMKLK PR+SVTTVLQ+GNCEAQRTSITKLRRVVKKLCKSKRFERALE
Sbjct: 61  QKGGDNGNFKQDFMKLKSPRSSVTTVLQSGNCEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
           VLM MET++ +RM+PA+HALRLELTIK+HGLLKAE+ F+QLP I S+KASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKLHGLLKAEELFNQLPNIASQKASSLLLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           E+NTEKAEAFM KL+ LGLVV+ HLYNEMMKLYVATSQNEKVPLVI+DMKQN I RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YGV SVELV+EEML+DKNVQVGWSTLSTLAKVY Q GLV KAFAALK A
Sbjct: 241 YNLWMNACSELYGVRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLS  NRLGYFFLITLYA+L DK+GV RVW ASKAV+ RPTCANYMCILLCLVK+G+I
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
            EAEK+F+EWEL+CRNYDIRVSNVLLGAYVRNGLLEKAESLHM TL RGG+PNYKTWEIL
Sbjct: 361 HEAEKIFQEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 475 MEG 478
           MEG
Sbjct: 421 MEG 423

[Close]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 2.1e-107
Identity = 204/383 (53.26%), Postives = 273/383 (71.28%), Query Frame = 0


Query: 113 TLQNGSD-----DGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSK 172
           +L +GSD     + NS +E ++   PR SVT++LQ         S+++LR + K+L +S 
Sbjct: 25  SLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSN 84

Query: 173 RFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQL----PTITSKKA 232
           R++ AL+++  ME + ++  +  + ALRL+L IK HGL + E+YF++L     ++   K+
Sbjct: 85  RYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKS 144

Query: 233 SSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDM 292
           + LPLL  YVK +  ++AEA M KL  LG +V  H +NEMMKLY A+ Q EKV +V+  M
Sbjct: 145 AYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMM 204

Query: 293 KQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGL 352
           K N+I RNVLSYNLWMNAC EV GV +VE V++EM+ DK+V+VGWS+L TLA VYI+ G 
Sbjct: 205 KGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGF 264

Query: 353 VDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMC 412
            +KA   L+DAEK L+  NRLGYFFLITLYASL +K+GV R+W  SK+V GR +C NY+C
Sbjct: 265 DEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYIC 324

Query: 413 ILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRG 472
           +L  LVK G+++EAE+VF EWE  C NYD+RVSNVLLGAYVRNG + KAESLH   L RG
Sbjct: 325 VLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERG 384

Query: 473 GSPNYKTWEILMEGWMIHPNWEE 487
           G+PNYKTWEILMEGW+   N E+
Sbjct: 385 GTPNYKTWEILMEGWVKCENMEK 407

[Close]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 3.6e-59
Identity = 127/349 (36.39%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 130 LKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMSMETR-DNLRMT 189
           ++ P     +VL       ++ +  +L RVVK+L K KR  +ALEV   M  R +  R++
Sbjct: 76  MEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLS 135

Query: 190 PAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVKERNTEKAEAFMVKL 249
            ++ A++L+L  KV G+  AE++F QLP     +     LL+ YV+ ++ EKAEA +  +
Sbjct: 136 ASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTM 195

Query: 250 RDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACNEVYGV 309
           RD G  ++   +N MM LY+   + +KV  ++ +MKQ  I+ ++ SYN+W+++C  +  V
Sbjct: 196 RDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSV 255

Query: 310 GSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKKLSPCNRLGYFF 369
             +ELV+++M +D ++   W+T ST+A +YI+ G  +KA  AL+  E +++  NR+ Y +
Sbjct: 256 EKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHY 315

Query: 370 LITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEAEKVFKEWELNC 429
           L++LY SL +KK ++RVW   K+V        Y  ++  LV++G+I+ AEKV++EW    
Sbjct: 316 LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVK 375

Query: 430 RNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILMEG 478
            +YD R+ N+L+ AYV+N  LE AE L    +  GG P+  TWEIL  G
Sbjct: 376 SSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVG 424

[Close]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.9e-55
Identity = 117/317 (36.91%), Postives = 178/317 (56.15%), Query Frame = 0


Query: 160 VKKLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTIT 219
           +KKL     +  AL++   ME R  +  T ++ A+ L+L  K   +   E+YF  LP  +
Sbjct: 62  IKKLRNRGLYYPALKLSEVMEER-GMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETS 121

Query: 220 SKKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLV 279
             + +   LL+ Y KE  TEKAE  + K+++L +  +   YN +M LY  T + EKVP +
Sbjct: 122 KTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAM 181

Query: 280 IRDMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYI 339
           I+++K   +  +  +YN+WM A      +  VE V EEM  D  V   W+T S +A +Y+
Sbjct: 182 IQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV 241

Query: 340 QEGLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCA 399
             GL  KA  AL++ E K +  +   Y FLITLY  L     V+R+WR+ +    + +  
Sbjct: 242 DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 301

Query: 400 NYMCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRT 459
            Y+ ++  LVK+ ++  AE +FKEW+ NC  YDIR+ NVL+GAY + GL++KA  L  + 
Sbjct: 302 AYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKA 361

Query: 460 LGRGGSPNYKTWEILME 477
             RGG  N KTWEI M+
Sbjct: 362 PRRGGKLNAKTWEIFMD 377

[Close]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.4e-49
Identity = 127/429 (29.60%), Postives = 224/429 (52.21%), Query Frame = 0


Query: 69  ESVMTRSLRSGTGRIH--FPLQAWRPRSSLTSPV------DSMDTISAVSSKTLQNGSDD 128
           ++++ RS R     IH  F   A     + T+PV            SA   +T+  G D 
Sbjct: 3   KNMLVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRD- 62

Query: 129 GNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMSME 188
                  + L   + S    ++    E       +L R+V++L K KR++ ALE+   M 
Sbjct: 63  -TLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 122

Query: 189 TRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVKERNTEK 248
            ++++++   ++A+ L+L  K+ GL  AE +F+ +P      A+   LLH YV+ + ++K
Sbjct: 123 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 182

Query: 249 AEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMN 308
           AEA   K+ + G + +   YN M+ +Y++  Q EKVP++I+++K  +   ++++YNLW+ 
Sbjct: 183 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 242

Query: 309 AC---NEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKK 368
           A    N+V G   V L  +E    + +   W T S L  +Y +   V+KA  ALK+ EK 
Sbjct: 243 AFASGNDVEGAEKVYLKAKE----EKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKL 302

Query: 369 LSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEA 428
           +S  NR+ Y  LI+L+A+L DK GV   W+  K+   +   A Y+ ++  +VK+GE ++A
Sbjct: 303 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 362

Query: 429 EKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILMEG 487
           + ++ EWE      D R+ N++L  Y+    +   E  + R + +G +P+Y TWEIL   
Sbjct: 363 KGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWA 422

[Close]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot
Match: Q9FZ24 (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 4.4e-49
Identity = 126/394 (31.98%), Postives = 211/394 (53.55%), Query Frame = 0


Query: 94  SSLTSPVDSMDTISAVSSKTLQNG------SDDGNSNQEFMKLKLPRNSVT--TVLQNGN 153
           +S++SP  +    ++VSS   +NG      +    S Q  +  KL   SVT  TV +  N
Sbjct: 33  ASVSSPAAANVVEASVSSPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLN 92

Query: 154 ---CEAQRTSITKLRRVVKKLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKV 213
               E        L R  K L K +R + A E+   ME R  +  + ++HA+ L+L  K 
Sbjct: 93  QFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKT 152

Query: 214 HGLLKAEDYFDQL-PTITSKKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYN 273
            GL  AE+YF+ L P+  + +++   L++ Y  E   EKA+A    + +L  V N   +N
Sbjct: 153 KGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFN 212

Query: 274 EMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTD 333
            MM +Y+  SQ EKVP+++  MKQ  I    ++Y++WM +C  +  +  +E + +EM  D
Sbjct: 213 NMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKD 272

Query: 334 KNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKG 393
              +  W+T S LA +Y + GL +KA +ALK  E+K++P NR  + FL++LYA +     
Sbjct: 273 SEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPE 332

Query: 394 VFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLG 453
           V+RVW + K         +Y+ +L  + K+G++D  +K+F EWE  C  YD+R++N+ + 
Sbjct: 333 VYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAIN 392

Query: 454 AYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILM 476
            Y++  + E+AE +    + +   P  K  ++LM
Sbjct: 393 TYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLM 425

[Close]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL
Match: A0A5A7VI21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004540 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 1.0e-205
Identity = 366/425 (86.12%), Postives = 388/425 (91.29%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MT WLRA EVAARTE VM   LRSGTGRI+F LQAWR  SSLTSPVDS+ T S VSSK L
Sbjct: 1   MTLWLRALEVAARTEPVMKMPLRSGTGRIYFLLQAWRSISSLTSPVDSLATNSVVSSKIL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           QNG DDGN  QEF KLKLPR SV TVLQ+GNCEAQRTSITKLR VVKK CK+KRFERAL+
Sbjct: 61  QNGGDDGNFKQEFRKLKLPRRSVNTVLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALK 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
            LM METRDN RM PAE+ALRLELTIK HGLLKAE+YF+QLPTI S+KASSLPLLHGYVK
Sbjct: 121 ALMLMETRDNFRMYPAEYALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC++VYGV S+ELVFEEMLTDKNVQVGWST+ TLAKVYIQEGLV+KAFAALK+A
Sbjct: 241 YNLWMNACSQVYGVRSIELVFEEMLTDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLSPC RLGYFFLITLYASLKDK+GV RVWRASKAV+G PTCANYMCILLCLVK+GE+
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEM 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           D+AEKVFKEWE NCRNYDIRVSNVLLGAYVRNGLLEKAESLH  TLGRGGSPNYKTWEIL
Sbjct: 361 DKAEKVFKEWEFNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEIL 420

Query: 475 MEGWM 480
           MEGW+
Sbjct: 421 MEGWV 425

[Close]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL
Match: A0A1S3BBE1 (pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN=LOC103488093 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 1.0e-205
Identity = 366/425 (86.12%), Postives = 388/425 (91.29%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MT WLRA EVAARTE VM   LRSGTGRI+F LQAWR  SSLTSPVDS+ T S VSSK L
Sbjct: 1   MTLWLRALEVAARTEPVMKMPLRSGTGRIYFLLQAWRSISSLTSPVDSLATNSVVSSKIL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           QNG DDGN  QEF KLKLPR SV TVLQ+GNCEAQRTSITKLR VVKK CK+KRFERAL+
Sbjct: 61  QNGGDDGNFKQEFRKLKLPRRSVNTVLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALK 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
            LM METRDN RM PAE+ALRLELTIK HGLLKAE+YF+QLPTI S+KASSLPLLHGYVK
Sbjct: 121 ALMLMETRDNFRMYPAEYALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC++VYGV S+ELVFEEMLTDKNVQVGWST+ TLAKVYIQEGLV+KAFAALK+A
Sbjct: 241 YNLWMNACSQVYGVRSIELVFEEMLTDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLSPC RLGYFFLITLYASLKDK+GV RVWRASKAV+G PTCANYMCILLCLVK+GE+
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEM 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           D+AEKVFKEWE NCRNYDIRVSNVLLGAYVRNGLLEKAESLH  TLGRGGSPNYKTWEIL
Sbjct: 361 DKAEKVFKEWEFNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEIL 420

Query: 475 MEGWM 480
           MEGW+
Sbjct: 421 MEGWV 425

[Close]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL
Match: A0A0A0LLA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369760 PE=4 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 4.9e-200
Identity = 360/425 (84.71%), Postives = 382/425 (89.88%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MT+WLRA EVAARTE VM   LRSG GRI+F LQAWR  SS TS VDS+ T S VSSK L
Sbjct: 1   MTQWLRALEVAARTEPVMKMPLRSGIGRIYFLLQAWRSLSSPTSRVDSLATTSVVSSKIL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           QNG DDG   QEFMKLKLPR+SV TVL       QRTSITKLRRVVKK CKSKRFERALE
Sbjct: 61  QNGGDDGKFKQEFMKLKLPRSSVNTVL-------QRTSITKLRRVVKKFCKSKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
            L+ METRDN RM PAEHALRLELTIK HGLLKAE+YF+QLPTI S+KASSLPLLHGYVK
Sbjct: 121 ALILMETRDNFRMYPAEHALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           ERNTEKAEAFMVKLRD GLVVNHHLYNEMMKLYVAT QNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDSGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YGVGS+ELVFEEMLTDKNVQVGWST+ TLA VYIQEGLV+KAFAALK+A
Sbjct: 241 YNLWMNACSELYGVGSIELVFEEMLTDKNVQVGWSTMCTLANVYIQEGLVEKAFAALKEA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLSPC RLGYFFLITLYASLKDK+GVFRVWRASKAV+G PTCANY+CILLCLVK+GEI
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVFRVWRASKAVSGNPTCANYICILLCLVKLGEI 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           D+AEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLH  TLGRGG+PNYKTWEIL
Sbjct: 361 DKAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGNPNYKTWEIL 418

Query: 475 MEGWM 480
           MEGW+
Sbjct: 421 MEGWV 418

[Close]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL
Match: A0A6J1KAM1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492138 PE=4 SV=1)

HSP 1 Score: 692.2 bits (1785), Expect = 1.6e-195
Identity = 351/423 (82.98%), Postives = 388/423 (91.73%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MTRWL ASEVAART+SVM  +LRSGTGRIHF L+AWRP SS TSPVDS D ISAVS KTL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           Q G D+GN  Q+FMKLK PR+SVTTVLQ+GN EAQRTSITKLRRVVKKLCKSKRFERALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
           VLM MET++ +RM+PA+HALRLELTIKVHGLLKAE++F+QLP I S+KASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           E+NTEKAEAFM KL+ LGLVV+ HLYNEMMKLYVATSQNEKVPLVI+DMKQNQI RNVLS
Sbjct: 181 EQNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YGVGSVELV+EEML+DKNVQVGWSTLSTLAKVY Q GLV KAFAAL++A
Sbjct: 241 YNLWMNACSELYGVGSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLS  NRLGYFFLITLYA+L DK+GV RVW ASKAV+ RPTCANYMCILLCLVK+G+I
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           +EAEK+FKEWEL+CRNYDIRVSNVLLGAYVRNGLL++AESLHM TL RGG+PNYKTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEIL 420

Query: 475 MEG 478
           MEG
Sbjct: 421 MEG 423

[Close]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL
Match: A0A6J1HF62 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462481 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.3e-192
Identity = 348/423 (82.27%), Postives = 383/423 (90.54%), Query Frame = 0


Query: 55  MTRWLRASEVAARTESVMTRSLRSGTGRIHFPLQAWRPRSSLTSPVDSMDTISAVSSKTL 114
           MTRWL ASEVAART+SVM  +LRSGTGRI+F L+AWRP SS TSPVDS D ISAVS KTL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRINFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 115 QNGSDDGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALE 174
           Q G D+GN  Q+FMKLK PR+SVTTVLQ+GN EAQRTSITKLRRVVKKLCK KRFERALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKPKRFERALE 120

Query: 175 VLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVK 234
           VLM MET++ +RM+PA+HALRLELTIKVHGLLKAE++F+QLP I S+KASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 235 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLS 294
           E+NTEKAEAFM KL+ LGLVV+ HLYNEMMKLYVATSQNEKVPLVI+DMKQN I RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 295 YNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDA 354
           YNLWMNAC+E+YG  SVELV+EEML+DKNVQVGWSTLSTLAKVY Q GLV KAFAALK A
Sbjct: 241 YNLWMNACSELYGFRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 355 EKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEI 414
           EKKLS  NRLGYFFLITLYA+L DK+GV RVW ASKAV+ RPTCANYMCILLCLVK+G++
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDL 360

Query: 415 DEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEIL 474
           +EAEK+FKEWEL+CRNYDIRVSNVLLGAYVRNGLLEKAESLHM TL RGG+PNYKTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 475 MEG 478
           MEG
Sbjct: 421 MEG 423

[Close]

BLAST of ClCG08G011420 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-108
Identity = 204/383 (53.26%), Postives = 273/383 (71.28%), Query Frame = 0


Query: 113 TLQNGSD-----DGNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSK 172
           +L +GSD     + NS +E ++   PR SVT++LQ         S+++LR + K+L +S 
Sbjct: 25  SLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSN 84

Query: 173 RFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQL----PTITSKKA 232
           R++ AL+++  ME + ++  +  + ALRL+L IK HGL + E+YF++L     ++   K+
Sbjct: 85  RYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKS 144

Query: 233 SSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDM 292
           + LPLL  YVK +  ++AEA M KL  LG +V  H +NEMMKLY A+ Q EKV +V+  M
Sbjct: 145 AYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMM 204

Query: 293 KQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGL 352
           K N+I RNVLSYNLWMNAC EV GV +VE V++EM+ DK+V+VGWS+L TLA VYI+ G 
Sbjct: 205 KGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGF 264

Query: 353 VDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMC 412
            +KA   L+DAEK L+  NRLGYFFLITLYASL +K+GV R+W  SK+V GR +C NY+C
Sbjct: 265 DEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYIC 324

Query: 413 ILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRG 472
           +L  LVK G+++EAE+VF EWE  C NYD+RVSNVLLGAYVRNG + KAESLH   L RG
Sbjct: 325 VLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERG 384

Query: 473 GSPNYKTWEILMEGWMIHPNWEE 487
           G+PNYKTWEILMEGW+   N E+
Sbjct: 385 GTPNYKTWEILMEGWVKCENMEK 407

[Close]

BLAST of ClCG08G011420 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 230.7 bits (587), Expect = 2.6e-60
Identity = 127/349 (36.39%), Postives = 210/349 (60.17%), Query Frame = 0


Query: 130 LKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMSMETR-DNLRMT 189
           ++ P     +VL       ++ +  +L RVVK+L K KR  +ALEV   M  R +  R++
Sbjct: 76  MEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLS 135

Query: 190 PAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVKERNTEKAEAFMVKL 249
            ++ A++L+L  KV G+  AE++F QLP     +     LL+ YV+ ++ EKAEA +  +
Sbjct: 136 ASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTM 195

Query: 250 RDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACNEVYGV 309
           RD G  ++   +N MM LY+   + +KV  ++ +MKQ  I+ ++ SYN+W+++C  +  V
Sbjct: 196 RDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSV 255

Query: 310 GSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKKLSPCNRLGYFF 369
             +ELV+++M +D ++   W+T ST+A +YI+ G  +KA  AL+  E +++  NR+ Y +
Sbjct: 256 EKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHY 315

Query: 370 LITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEAEKVFKEWELNC 429
           L++LY SL +KK ++RVW   K+V        Y  ++  LV++G+I+ AEKV++EW    
Sbjct: 316 LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVK 375

Query: 430 RNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILMEG 478
            +YD R+ N+L+ AYV+N  LE AE L    +  GG P+  TWEIL  G
Sbjct: 376 SSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVG 424

[Close]

BLAST of ClCG08G011420 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 218.4 bits (555), Expect = 1.3e-56
Identity = 117/317 (36.91%), Postives = 178/317 (56.15%), Query Frame = 0


Query: 160 VKKLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTIT 219
           +KKL     +  AL++   ME R  +  T ++ A+ L+L  K   +   E+YF  LP  +
Sbjct: 62  IKKLRNRGLYYPALKLSEVMEER-GMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETS 121

Query: 220 SKKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLV 279
             + +   LL+ Y KE  TEKAE  + K+++L +  +   YN +M LY  T + EKVP +
Sbjct: 122 KTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAM 181

Query: 280 IRDMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYI 339
           I+++K   +  +  +YN+WM A      +  VE V EEM  D  V   W+T S +A +Y+
Sbjct: 182 IQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV 241

Query: 340 QEGLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCA 399
             GL  KA  AL++ E K +  +   Y FLITLY  L     V+R+WR+ +    + +  
Sbjct: 242 DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 301

Query: 400 NYMCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRT 459
            Y+ ++  LVK+ ++  AE +FKEW+ NC  YDIR+ NVL+GAY + GL++KA  L  + 
Sbjct: 302 AYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKA 361

Query: 460 LGRGGSPNYKTWEILME 477
             RGG  N KTWEI M+
Sbjct: 362 PRRGGKLNAKTWEIFMD 377

[Close]

BLAST of ClCG08G011420 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 2.4e-50
Identity = 127/429 (29.60%), Postives = 224/429 (52.21%), Query Frame = 0


Query: 69  ESVMTRSLRSGTGRIH--FPLQAWRPRSSLTSPV------DSMDTISAVSSKTLQNGSDD 128
           ++++ RS R     IH  F   A     + T+PV            SA   +T+  G D 
Sbjct: 3   KNMLVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRD- 62

Query: 129 GNSNQEFMKLKLPRNSVTTVLQNGNCEAQRTSITKLRRVVKKLCKSKRFERALEVLMSME 188
                  + L   + S    ++    E       +L R+V++L K KR++ ALE+   M 
Sbjct: 63  -TLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 122

Query: 189 TRDNLRMTPAEHALRLELTIKVHGLLKAEDYFDQLPTITSKKASSLPLLHGYVKERNTEK 248
            ++++++   ++A+ L+L  K+ GL  AE +F+ +P      A+   LLH YV+ + ++K
Sbjct: 123 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 182

Query: 249 AEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMN 308
           AEA   K+ + G + +   YN M+ +Y++  Q EKVP++I+++K  +   ++++YNLW+ 
Sbjct: 183 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 242

Query: 309 AC---NEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKK 368
           A    N+V G   V L  +E    + +   W T S L  +Y +   V+KA  ALK+ EK 
Sbjct: 243 AFASGNDVEGAEKVYLKAKE----EKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKL 302

Query: 369 LSPCNRLGYFFLITLYASLKDKKGVFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEA 428
           +S  NR+ Y  LI+L+A+L DK GV   W+  K+   +   A Y+ ++  +VK+GE ++A
Sbjct: 303 VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA 362

Query: 429 EKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILMEG 487
           + ++ EWE      D R+ N++L  Y+    +   E  + R + +G +P+Y TWEIL   
Sbjct: 363 KGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWA 422

[Close]

BLAST of ClCG08G011420 vs. TAIR 10
Match: AT1G02370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 3.2e-50
Identity = 126/394 (31.98%), Postives = 211/394 (53.55%), Query Frame = 0


Query: 94  SSLTSPVDSMDTISAVSSKTLQNG------SDDGNSNQEFMKLKLPRNSVT--TVLQNGN 153
           +S++SP  +    ++VSS   +NG      +    S Q  +  KL   SVT  TV +  N
Sbjct: 33  ASVSSPAAANVVEASVSSPAAENGVRTSVAAPTVASRQRELYKKLSMLSVTGGTVAETLN 92

Query: 154 ---CEAQRTSITKLRRVVKKLCKSKRFERALEVLMSMETRDNLRMTPAEHALRLELTIKV 213
               E        L R  K L K +R + A E+   ME R  +  + ++HA+ L+L  K 
Sbjct: 93  QFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKT 152

Query: 214 HGLLKAEDYFDQL-PTITSKKASSLPLLHGYVKERNTEKAEAFMVKLRDLGLVVNHHLYN 273
            GL  AE+YF+ L P+  + +++   L++ Y  E   EKA+A    + +L  V N   +N
Sbjct: 153 KGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFN 212

Query: 274 EMMKLYVATSQNEKVPLVIRDMKQNQIQRNVLSYNLWMNACNEVYGVGSVELVFEEMLTD 333
            MM +Y+  SQ EKVP+++  MKQ  I    ++Y++WM +C  +  +  +E + +EM  D
Sbjct: 213 NMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKD 272

Query: 334 KNVQVGWSTLSTLAKVYIQEGLVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKG 393
              +  W+T S LA +Y + GL +KA +ALK  E+K++P NR  + FL++LYA +     
Sbjct: 273 SEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPE 332

Query: 394 VFRVWRASKAVNGRPTCANYMCILLCLVKVGEIDEAEKVFKEWELNCRNYDIRVSNVLLG 453
           V+RVW + K         +Y+ +L  + K+G++D  +K+F EWE  C  YD+R++N+ + 
Sbjct: 333 VYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAIN 392

Query: 454 AYVRNGLLEKAESLHMRTLGRGGSPNYKTWEILM 476
            Y++  + E+AE +    + +   P  K  ++LM
Sbjct: 393 TYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLM 425

The following BLAST results are available for this feature:

BLAST of ClCG08G011420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885083.1	1.3e-223	91.76	pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida]	[more]
XP_008444877.1	2.1e-205	86.12	PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Cucumis melo] ...	[more]
XP_004152747.1	1.0e-199	84.71	pentatricopeptide repeat-containing protein At5g27460 [Cucumis sativus] >KGN6272...	[more]
XP_022997144.1	3.4e-195	82.98	pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxi...	[more]
XP_023545813.1	3.7e-194	82.98	pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pep...	[more]

BLAST of ClCG08G011420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E911	2.1e-107	53.26	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
Q8LPS6	3.6e-59	36.39	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
O22714	1.9e-55	36.91	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9SY07	3.4e-49	29.60	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q9FZ24	4.4e-49	31.98	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop...	[more]

BLAST of ClCG08G011420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VI21	1.0e-205	86.12	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BBE1	1.0e-205	86.12	pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0LLA5	4.9e-200	84.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369760 PE=4 SV=1	[more]
A0A6J1KAM1	1.6e-195	82.98	pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1HF62	1.3e-192	82.27	pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita mo...	[more]

BLAST of ClCG08G011420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27460.1	1.5e-108	53.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	2.6e-60	36.39	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.3e-56	36.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	2.4e-50	29.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G02370.1	3.2e-50	31.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 414..434
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 95..479
None	No IPR available	PANTHER	PTHR45717:SF13	OS02G0796400 PROTEIN	coord: 95..479
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 248..302 e-value: 2.5E-4 score: 21.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 401..424 e-value: 0.17 score: 12.2 coord: 161..182 e-value: 0.75 score: 10.2 coord: 437..458 e-value: 0.0082 score: 16.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 432..466 score: 9.086975
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 363..498 e-value: 7.7E-14 score: 53.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 152..362 e-value: 1.0E-16 score: 63.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G011420.1	ClCG08G011420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding