ClCG08G008940 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G008940
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	CG_Chr08: 21472502 .. 21478698 (-)
RNA-Seq Expression	ClCG08G008940
Synteny	ClCG08G008940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCACCCCTTTCATCTTCCCTCACTCTCACGTGGAGTCCATCTTTTTCCTTGACGCCGGTTCCCTTCCATTCAGCAGCTCCGGGCCGCCGCCGCCGCCGTAGTCTCTTTTCCCGCTCGTGCCGCCTCCTAGCAGTTGGTTACTGTCCGTCTGGCATCCCCGTCATTCCAAATTGGACTGAAACTTCACCTGTTGACGAGGGCAAGTCTGTACCATCTCCGGCGGCTGGAAATGGTGTTTTGACGGTACACATCCTTTGCTAGATCTGAATCTCCCTTCACTTCTCATTCTATTTCTCTCTCTCTGTTAACTTTAGTTATTTCATTCATCTCTCTCTCTTGATTGGCCTTTTCTGGTGCCGTATTAGTGATGATCCTTTTTCCCGACTCGTGTTACTACTGCGAACATGATGGGAGAAATTTGTTTTTATGAAACTATAAGAGTCTAGAAAGTGTGTATTGCAATGTGCTGTTCAGAGTAGAAAAGAGGGATTTTATTTCTATTTTCGTGAATTATATCTATCTTCTAATGCCAGTTTGATAATCTGTTATAGGGCCGGTGCGGCCTCAGAATAGTACTTACCGTTTCTTCGTGAATGGTTTGGTATTTTTCCCCTGTACTTTTGAAAGTTTCTAGTTAACAATGAAATTCACGTTTTACTATTTATGCTCGATTTTGTTTCTCATTTGTATTATCTTAACTAATTTTTAGGAGCTTGATTGTAGAGGAGGAATGAAAAGAGGAACATAATATCTAGGACAAGCTTGTTTTGTTTAGAAGTTTCATTTCCGAGAGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGGTAAACCTTCTCATTTTTGCAGTTCAAAATTTTTAGTTTCTATACCAGTTTCTCCTTTCCAATATCACCCCCATTTCACCTCCTGATAGAAGGGGAGGAAAAAACAAAGGGAATAAATCGTTGTGGCTATAAATTAGCTATCATCTTCCTACTCAGCTACAATTCCTCAGCTGAACAAGAAACCAAAGATAATGTACAAGTGAAGGTTTTTCCATATTCGATTCCAATATTTGATAAGCTTTATAGGCTTTGTATTTAGCTTTCATTTTACTTTTCTGCATACTTCTACTGGCTTTGCATGTGATGGTTTGCATTTTTCTTCTTGTTTTATTTCTGTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTAAATCTCTCTCCTTACTTTCTATGGGACTGTAGAACATTTGTTTTCAATAAATTTGACTCATTTGCTCCTTACTGATACCTTGCTTTTCAATGGATTCCATATGTCTATGATGTTATAACCAGGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGGTAATCTTGAACACTGTCAGGATGATATAATATTGCTCAAATCTTGATATTTTCATTTGATTGTTGCTTCATCTCACTTGCAGTCTAAGGTTTCATTTACTATAATTATTTTTGGCAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTCAGTTATTTATCAACTCCTAGGTCATTACTATTATTGTTGTTTTTACACTGATTACCACCTAGGTTATTACTGTACACCATTTTGCATCATTTTATGGCCTTCCACACATTTCAGTTACGTACATTTTTTTTCCTATGTTTTTCATGGTATAATGAACTAATGTGCTTGAAATAATTTGACTGGAGGACGATAATTTGTTGGGTTTGATGACGTATGCCTTGCCTACAGTCTACAGGATTTCCAGATTGCAAAACCCCAATCCTTTGCTCTTGGATCGTTATTTCATATCACTGAAATCTTCCCTTCAAAACCTCCTCATCTAGACCCCTATGAGAATGCCCCCTCCCTTCCCGGAAATGGAGAAAAAACCTGGCCACAAAATTTCTGAAAATCTGCACTATGAGTTCAAAAAATCCAGAAAACTTTAGTCATTACATTTACTTTACTTTTGAAGTTGTCCTTACCTCTTCTTGCTGGGGTAGGGGGAACTTCCTTGAGGGGTTTCAGGTGGGGGAAGGTATGGGAAGGGATATGATGGTTTTACTGTTGGTTTCTTGATGGCACGGCCTTCTTTTATTTTTGTGGGGAAGGGTCTTTTGTTAATCTAAGCTATATCTTGTCTCTTTTTGAGTCTATATGGTCTGAAGATACAGAAACAAGTGTCAAGGAGGAATGCAAGTCTTTTCAAGTATGTCCAATTCTATTGTTTATTTTTGTGATCTTGTACAATTCACAGCCTCTAATTGGAGTAACCAACACAAGTTCTTTTGTCAATACTCCACTTTTTTTCCATAAACTTAGATTGGAAGGTTTTTATTTTTATTTTTTATGTAGAATCTTTCTCGTATATTTTTTTAGTAAGGAACCCTGTTTTCATTGAGAAAAATGAAAGAATATATACGGGCATGAAAAGAAAGCTCAACAGAGAAAGGGAGTTGGACTCTAACTACAAAAATAGACTCCAATTCAAAAGACAAGACCTAGGTAGTAATTACAAAAAGCTCTAGTGATTGACACCCATAAGGAGGTATTAAACCTAGCTACCTCCCAAACTTCTGTCACCTGATCTTTTACCTCTAAAAATTCTATTTTTCCTTTCAAGCCAAATTCCTAACAAAACTTCAAAGCCAGCTAGTCTACCATAAAAGTTTACTCTTCTCCGTGTGTAAGAACCCAGAAGCACCTCCTTTAGTTGAGCCCTGCCAACTCCATTCCAAGCCCAACAAACGCTAAACAATCTCAGCTAACAACTCCAAGGGTGGTGAGCAAACTGGCAGTCCCAAACCAAATGATTCAAGGCCTTGTATCTCCTACAAATAATGGACCATTGTGAGAACTAAACATAAAGAGTGCCTTTGAACGCAGTCCATGGTATTATCTCTCACAGGTGGTTGGAGGATTGACCCCTCTCCTCTGTGTTTCGTCTGTACTGCTTCTATGAGGTATCATTCGGTCGTTTTTATTTTTCCTTCTCAGGGAACTTAATTTTAGTGTAGTATGGGTGTGGGTTCCAATAGCTACTTTTGGGAGAATACATGCTTGGGAGATAAACACCTCTGCTCTATGTTTCCTTTCCTCATTTGTACTGTCTTTCTTCTATGAGGTGTCGTTGGATAGATTCTGGTTTTTCGTCTCAGGGAACTTAATTCTCTCTCTTGAGCTTCTTCTTCCTTTCTTTCTTCTGAGGAGAAATTCCTCTTCGTCTTTGGTTCATCCGAGGAGAAATTCCTCTTGTTTCTAGATCCCAACCATTCAAGAGGTTTTCTTGTAGCTCTTTTTTCGCGTTTGGCAGTCTCTTCTTGGGCTACTTGTTGGGTGTTTTCCTCATTTTGGAAGGTGAAAATTCTAAAGAAGGTCAAATTTTTTTTGGTAAATTCTTAATAGTAGGGTCAGTACGTTGGACTGCACCATGGGAAATTCGTCCCATTTGATAAAGCCACTATGCTGTATCCTTTGCAGTGGTGGTTGAGGATCTAGAACACCTTTTTTGGTGGGGTTGTTGGTTTGCTACGGTTTTGAACAATTTTTTCCAGATGATGAATGTTTGACTCGATCCAACGTGTACAGTTAAACAATTCTCCTTTTTACATTTATTGAGGAACTTCATCTTTCCATTTGATAAAGTTTTTCTTCCTCTCTTAATCTACTTTTCACAACTTACATTTGAAACACAAAATTTTTAACTCCAACATATTAACTCCAGACTTATTAATCCCACCCAGTGGGCCAACTGTCCCCCTAATGTTATGTGAATTTCAAATTAAGACCAACTCAACCCAAATATGTCATCTATAAGAACGAATAAAGAAAAATAAGGCTTTAGGAAATTATTAAGGATACAGAACTGTTTTTGTGAAAATGAAAACACTGGAAGGTGTTTGATTGAAATTTTCTTGTCTTTAAGAACGTCATCCATAAAAGAGTATAGCCATTTTTCTTTGGTTTTGATGTGAATGGTTCTTGATACAACTTTGACACTAAGCTCTGAGTAAGTTTGTACATTGTATGCTCGAAATACTTTTTAGAACTTGATTCTGCATATCTGCCGTGATATCCTGATATTGTTCTTGTTCAATAACAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGATTGACTTTCATAGCATCGACAGACGGCATGGGAGAACGATGTCTCAAAACTTTTCTGCCTCAGGTGATAAAGAGCTTGGATCAGCTGATCTCCCTTTCTAATTATGTAATATCATGTATCTGATTGAATGCTGAATAGTGAGCCGTTTAAAAATTCTTAGGCAAACCCCTATAGTTTTTTTCCCTAGATAAGAAATGAAAGGATCGTATCAATGGAGGTCATACAAGAAAAGGGGGGAGATGAGATATTCCGCATGTTGAGGTTACAAATGCACACCAGAATTAGAGGAAAAAATTGATTAGTAAATGACATGTAGTTTTCTTTAGATTTTTGTTTGGTTAGAAAATGGTTTGAGCACTTAGTAGATTACGGATGTCGAAATTATTCGGTTAAAACATATTTTTAGTTGGTGTTTTGACTTTGTGAGACTAATTTTGTGTGTAACGATTTAGGTGAGAGTGGAGTTTATGTAAAAAGTTTAAAGTTCATTCCCAACCTTTGTTACAAAGAAACTTTTGTGTTAG

mRNA sequence

CTCACCCCTTTCATCTTCCCTCACTCTCACGTGGAGTCCATCTTTTTCCTTGACGCCGGTTCCCTTCCATTCAGCAGCTCCGGGCCGCCGCCGCCGCCGTAGTCTCTTTTCCCGCTCGTGCCGCCTCCTAGCAGTTGGTTACTGTCCGTCTGGCATCCCCGTCATTCCAAATTGGACTGAAACTTCACCTGTTGACGAGGGCAAGTCTGTACCATCTCCGGCGGCTGGAAATGGTGTTTTGACGGAGCTTGATTGTAGAGGAGGAATGAAAAGAGGAACATAATATCTAGGACAAGCTTGTTTTGTTTAGAAGTTTCATTTCCGAGAGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGATTGACTTTCATAGCATCGACAGACGGCATGGGAGAACGATGTCTCAAAACTTTTCTGCCTCAGGTGATAAAGAGCTTGGATCAGCTGATCTCCCTTTCTAATTATGTAATATCATGTATCTGATTGAATGCTGAATAGTGAGCCGTTTAAAAATTCTTAGGCAAACCCCTATAGTTTTTTTCCCTAGATAAGAAATGAAAGGATCGTATCAATGGAGGTCATACAAGAAAAGGGGGGAGATGAGATATTCCGCATGTTGAGGTTACAAATGCACACCAGAATTAGAGGAAAAAATTGATTAGTAAATGACATGTAGTTTTCTTTAGATTTTTGTTTGGTTAGAAAATGGTTTGAGCACTTAGTAGATTACGGATGTCGAAATTATTCGGTTAAAACATATTTTTAGTTGGTGTTTTGACTTTGTGAGACTAATTTTGTGTGTAACGATTTAGGTGAGAGTGGAGTTTATGTAAAAAGTTTAAAGTTCATTCCCAACCTTTGTTACAAAGAAACTTTTGTGTTAG

Coding sequence (CDS)

ATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGATAATCCAGCAGAACCAATTCAACCAGCAGCTACATCAGTTATTCCACCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGACCCCATGTAACACAAAATGGTGAGATGAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCGTGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAGTGAGTGTTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCATCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACATTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAAGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCATGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGATTGA

Protein sequence

MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD

Homology

[Close]

BLAST of ClCG08G008940 vs. NCBI nr
Match: XP_038885479.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_038885480.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida])

HSP 1 Score: 1095.1 bits (2831), Expect = 0.0e+00
Identity = 559/569 (98.24%), Postives = 565/569 (99.30%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPS+VP+IAPIP PIIRP
Sbjct: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSVVPSIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPP FRP VTQNGEMRTSDSDSEHDELAPSRTA GSTAEYEVSEESRQVRERQE
Sbjct: 61  LAPLPSRPPHFRPPVTQNGEMRTSDSDSEHDELAPSRTAGGSTAEYEVSEESRQVRERQE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPV+ECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKDEQTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDID 569

[Close]

BLAST of ClCG08G008940 vs. NCBI nr
Match: XP_004146749.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_031742738.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >KGN47802.1 hypothetical protein Csa_003570 [Cucumis sativus])

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 555/569 (97.54%), Postives = 562/569 (98.77%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of ClCG08G008940 vs. NCBI nr
Match: XP_008464716.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903247.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903248.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903249.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 551/569 (96.84%), Postives = 561/569 (98.59%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of ClCG08G008940 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 1062.4 bits (2746), Expect = 1.4e-306
Identity = 543/570 (95.26%), Postives = 557/570 (97.72%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDLDNPAEP+QPAAT+VIP SIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGEMRTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPV+ECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of ClCG08G008940 vs. NCBI nr
Match: KAG6599065.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1059.7 bits (2739), Expect = 9.0e-306
Identity = 542/570 (95.09%), Postives = 556/570 (97.54%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDLDNPAEP+QPAAT+VIP SIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGEMRTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPV+ECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot
Match: O22212 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 714.9 bits (1844), Expect = 7.1e-205
Identity = 361/539 (66.98%), Postives = 429/539 (79.59%), Query Frame = 0


Query: 37  AATSVIPPSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPS 96
           A   V+PPS  P +APIP   + P  P+ +RPP FRP V+QNG ++TSDSDSE D+    
Sbjct: 34  AIPPVVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD---- 93

Query: 97  RTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPIT 156
                     E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPIT
Sbjct: 94  -------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPIT 153

Query: 157 LFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEG 216
           LFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG
Sbjct: 154 LFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDDEVLEYPFFTEG 213

Query: 217 SKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGD 276
            K L +ARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A  + LDCS  GD
Sbjct: 214 PKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGD 273

Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPVSECLA 336
           DRPL+GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV +CLA
Sbjct: 274 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 333

Query: 337 TASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVEL 396
           TASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWDI TG EL
Sbjct: 334 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 393

Query: 397 LLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPN 456
           LLQEGHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPN
Sbjct: 394 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 453

Query: 457 GYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWS 516
           GYHLA+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS
Sbjct: 454 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 513

Query: 517 ARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE-----QTMDVD 570
            RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+     +TMD+D
Sbjct: 514 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot
Match: Q3MHE2 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 4.7e-116
Identity = 218/459 (47.49%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot
Match: O43172 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 419.9 bits (1078), Expect = 4.7e-116
Identity = 218/459 (47.49%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 190

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 310

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 311 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 370

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 371 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 430

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 431 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 490

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 491 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519

[Close]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot
Match: Q5NVD0 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 4.7e-116
Identity = 218/459 (47.49%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot
Match: Q9DAW6 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 8.1e-116
Identity = 218/459 (47.49%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSEC--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P S          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL
Match: A0A0A0KHD8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1088.6 bits (2814), Expect = 0.0e+00
Identity = 555/569 (97.54%), Postives = 562/569 (98.77%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL
Match: A0A1S4E4U8 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 551/569 (96.84%), Postives = 561/569 (98.59%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL
Match: A0A6J1KDQ7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493950 PE=4 SV=1)

HSP 1 Score: 1062.4 bits (2746), Expect = 6.7e-307
Identity = 543/570 (95.26%), Postives = 557/570 (97.72%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDLDNPAEP+QPAAT+VIP SIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGEMRTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPV+ECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL
Match: A0A5A7TI50 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00300 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 5.7e-306
Identity = 542/569 (95.25%), Postives = 552/569 (97.01%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+LDNPAEP QPAATSVIPPSIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
           RAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSF         SSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF---------SSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPV+ECLATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 560

[Close]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL
Match: A0A6J1G322 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450343 PE=4 SV=1)

HSP 1 Score: 1059.3 bits (2738), Expect = 5.7e-306
Identity = 541/570 (94.91%), Postives = 556/570 (97.54%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDLDNPAEP+QPAAT+VIP SIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGEMRTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYS++RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 241 ERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           ERAKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPV+ECLATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of ClCG08G008940 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 714.9 bits (1844), Expect = 5.1e-206
Identity = 361/539 (66.98%), Postives = 429/539 (79.59%), Query Frame = 0


Query: 37  AATSVIPPSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEMRTSDSDSEHDELAPS 96
           A   V+PPS  P +APIP   + P  P+ +RPP FRP V+QNG ++TSDSDSE D+    
Sbjct: 34  AIPPVVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD---- 93

Query: 97  RTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPIT 156
                     E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPIT
Sbjct: 94  -------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPIT 153

Query: 157 LFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEG 216
           LFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG
Sbjct: 154 LFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDDEVLEYPFFTEG 213

Query: 217 SKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGD 276
            K L +ARI+IAK+S+ RAA R++RAKR+RDDPDED++AE  WAL+ A  + LDCS  GD
Sbjct: 214 PKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGD 273

Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPVSECLA 336
           DRPL+GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV +CLA
Sbjct: 274 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 333

Query: 337 TASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVEL 396
           TASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWDI TG EL
Sbjct: 334 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 393

Query: 397 LLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPN 456
           LLQEGHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPN
Sbjct: 394 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 453

Query: 457 GYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWS 516
           GYHLA+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS
Sbjct: 454 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 513

Query: 517 ARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE-----QTMDVD 570
            RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+     +TMD+D
Sbjct: 514 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of ClCG08G008940 vs. TAIR 10
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 311.2 bits (796), Expect = 1.7e-84
Identity = 169/327 (51.68%), Postives = 198/327 (60.55%), Query Frame = 0


Query: 216 GSKALLDARIDIAKYSILRAASRLERAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIG 275
           G   L +ARI+I K  I RAA R++R  R+R+DPDED  AE   AL+    +VL  S+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 276 DDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPV-SEC 335
           DDRPL+GCS S DGK L T SLSGV KLW +PQV  K+   KGH E VTDV+FS V  EC
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 336 LATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGV 395
           LATAS DRT ++W  +G+LL+TF+                                    
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFK------------------------------------ 181

Query: 396 ELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFS 455
                                   +S G D+LARVWDLRT R++L  +GH+K VL V FS
Sbjct: 182 ------------------------ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 241

Query: 456 PNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKI 515
           PNGYHLA+GGEDN CRIWDLR +K LYIIPAH NLVSQVKYEPQE YFL TAS DM   I
Sbjct: 242 PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNI 268

Query: 516 WSARDFKPVKTLSGHEAKVTSLDIISD 541
           WS RDF  VK+L GHE+KV SLDI  D
Sbjct: 302 WSGRDFSLVKSLVGHESKVASLDIAVD 268

[Close]

BLAST of ClCG08G008940 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-42
Identity = 97/290 (33.45%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSM-----PQVRKVSNFKGHTERVTDVMFSPVS 336
           +R +S   FSSDG+ LA++S     + +++     P    V  F GH   ++DV FS  +
Sbjct: 24  NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83

Query: 337 ECLATASADRTARLWSAE-GSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIE 396
             + +AS D+T +LW  E GSL+KT  GH +    + F+P    + + SFD+T R+WD+ 
Sbjct: 84  RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143

Query: 397 TGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLAL-EGHVKPVLG 456
           TG  L +   HS  V  + F+ DGSL+ S   D L R+WD  TG  V  L +    PV  
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203

Query: 457 VSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVK--YEPQEGYFLVTASF 516
           V FSPNG  +  G  DNT R+W++   K L     H N    +   +    G  +V+ S 
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263

Query: 517 DMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 558
           D    +W     K ++ L GH   V ++        IA+ S D+T+++W+
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313

[Close]

BLAST of ClCG08G008940 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-34
Identity = 81/259 (31.27%), Postives = 138/259 (53.28%), Query Frame = 0


Query: 310 RKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEG-SLLKTFEGHLDRLARIAF 369
           R +   +GHT  ++ V FS     LA+AS D+T  LWSA   SL+  +EGH   ++ +A+
Sbjct: 34  RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93

Query: 370 HPSGKYLGTTSFDKTWRLWDIETGVELL-LQEGHSRSVYGIAFHHDGSLVSSCGLDALAR 429
                Y  + S D T R+WD  +  E L +  GH+  V+ + F+   +L+ S   D   R
Sbjct: 94  SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153

Query: 430 VWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL-YIIPAHS 489
           +W+++TG+ V  ++ H  P+  V F+ +G  + +   D +C+IWD ++   L  +I   S
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213

Query: 490 NLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKV---TSLDIISDGQC 549
             VS  K+ P  G F++ A+ D T K+ +    K +K  +GH  KV   TS   +++G+ 
Sbjct: 214 PAVSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 273

Query: 550 IATVSHDRTIKLWSVNSKD 563
           I + S D  + LW + +++
Sbjct: 274 IVSGSEDNCVYLWDLQARN 291

[Close]

BLAST of ClCG08G008940 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-34
Identity = 87/288 (30.21%), Postives = 146/288 (50.69%), Query Frame = 0


Query: 292 LATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVSECLATASADRTARLWSAEG- 351
           +AT  +   A L+  P  + +S   GH+++VT V F   S+ + TASAD+T R+W   G 
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296

Query: 352 ---SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSV-- 411
              +   T   H   +  +  HP+ KY  + S D TW  +D+ +G  L      S++V  
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356

Query: 412 YGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGED 471
              AFH DG ++ +    ++ ++WD+++  +V   +GH   V  +SFS NGY LAT  ED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416

Query: 472 NTCRIWDLRKKKSL-YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR-DFKPVK 531
              R+WDLRK ++    + A +N    V+++P   Y  + AS     +  S + ++  +K
Sbjct: 417 GV-RLWDLRKLRNFKSFLSADAN---SVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIK 476

Query: 532 TLS--GHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           TL       K T +   SD Q +A  S DR ++++ +   ++  +D D
Sbjct: 477 TLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDD 520

The following BLAST results are available for this feature:

BLAST of ClCG08G008940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885479.1	0.0e+00	98.24	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_...	[more]
XP_004146749.1	0.0e+00	97.54	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_03...	[more]
XP_008464716.1	0.0e+00	96.84	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo...	[more]
XP_022999661.1	1.4e-306	95.26	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]
KAG6599065.1	9.0e-306	95.09	U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argy...	[more]

BLAST of ClCG08G008940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22212	7.1e-205	66.98	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
Q3MHE2	4.7e-116	47.49	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
O43172	4.7e-116	47.49	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]
Q5NVD0	4.7e-116	47.49	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
Q9DAW6	8.1e-116	47.49	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]

BLAST of ClCG08G008940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHD8	0.0e+00	97.54	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A1S4E4U8	0.0e+00	96.84	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
A0A6J1KDQ7	6.7e-307	95.26	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3...	[more]
A0A5A7TI50	5.7e-306	95.25	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. mak...	[more]
A0A6J1G322	5.7e-306	94.91	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX...	[more]

BLAST of ClCG08G008940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41500.1	5.1e-206	66.98	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT2G05720.1	1.7e-84	51.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	2.1e-42	33.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	1.2e-34	31.27	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G33340.1	1.6e-34	30.21	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	PANTHER	PTHR19846:SF3	BNAC04G01920D PROTEIN	coord: 104..563
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 104..563
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 356..392 score: 10.943775
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 440..474 score: 13.2374
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 525..560 score: 11.286501
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 315..347 score: 11.207411
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 482..515 score: 9.151057
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 398..435 score: 10.917412
None	No IPR available	CDD	cd00200	WD40	coord: 279..557 e-value: 1.04959E-91 score: 281.531
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 334..348 score: 36.13 coord: 544..558 score: 31.77 coord: 459..473 score: 40.13
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 139..192 e-value: 5.3E-18 score: 75.8
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 144..171 e-value: 1.1E-12 score: 47.2
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 518..557 e-value: 3.0E-10 score: 50.1 coord: 391..430 e-value: 2.5E-6 score: 37.0 coord: 475..515 e-value: 2.1E-4 score: 30.6 coord: 264..305 e-value: 0.014 score: 24.6 coord: 308..347 e-value: 1.3E-8 score: 44.6 coord: 433..472 e-value: 4.4E-11 score: 52.8 coord: 349..388 e-value: 1.1E-7 score: 41.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 350..388 e-value: 1.3E-4 score: 22.7 coord: 399..430 e-value: 5.3E-4 score: 20.7 coord: 312..347 e-value: 9.1E-5 score: 23.2 coord: 437..472 e-value: 5.5E-9 score: 36.5 coord: 520..557 e-value: 1.6E-6 score: 28.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 356..397 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 398..439 score: 14.251289
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 315..347 score: 13.516088
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 440..481 score: 16.958164
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 482..524 score: 11.878597
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 525..566 score: 14.217871
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 108..185 e-value: 5.9E-15 score: 56.5
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 121..177
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 261..439 e-value: 1.8E-48 score: 167.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 440..568 e-value: 1.3E-40 score: 141.4
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 375..389
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 417..431
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 459..473
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 274..556

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G008940.1	ClCG08G008940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030621	U4 snRNA binding
molecular_function	GO:0017070	U6 snRNA binding