ClCG08G008540 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGATCTTCTCTAAGTTTATTTATAGACTCGAAGTCATAGACCGTGCTGCATTACGGCCCTGGTAGATTTGGAAACGTTCTTTTTGTTCCTGCACCTGGTCCAAATGAGCGAGGACTGATCTTAAGAGCTCTTGCAAGAAAGATGCCTGTCGAATGCCAGTGTAGATTTAGATGCTATTGGGAAAATGGAGGCATGTGTAGATTTTAATGGGGCTGATGTTGCTGATATGGTTTGTTTCTATCTCGGTTCAATCTATAGTATCTATGCTAAAAGTTTAAAAGTTTGATTCCTCACTTTTTATTTGGGAATGGAGCATGGATATGAATATGACAGACAAAACAACACGTCATTTTCTTAAAAAAATATTGGACATGGATGCTACAAGAACACATTTATTAAAATATACACTTCTTAAGATGTATGTCACTTTTATACGAGGAATTCAAAGTCAATAAGTTTATGCACTTACAGGCTTAAAGAAATAAGTTCAATGTATTTCGGTTTCAAACTTTTTTTGCTCCTATATTATTATGTGTCTATTTAGTATACTCGATAATTGTTTAATATATGCCTAACAAAGGTTGGACCTATATTAAATTTGTATAACTAGTGTCTAGCATGTATTTATTGTGCTAACAATTGGTTGATACATGTCCAACAAGTGTCGAGGTATCCAAGTGACACGAGAATACGATAGTCAAACTAAAGTGCTTGTGCTTCTTAGGGCACTAATTACCATCCTAAACGTCGATGGTTCAATCTCCATCCTTGCAAATGTTGAACTCGGGTAAAAGAAGTGTTTGGTATACTTAACAAGTGTTCAATATGTGCCTAACGAAGATTGGAACTATATTGACTTTATACAACTAGTGTCTAACATATTGATAAGAATAGTATTAGGGTATTATTAGAGTATTAAAGTATATTAGTAATTACTAATTAACCAGGGAGTTTGTTATATTTTGGTTATAAATAGAGGGTGAGGGAAATGAAGAAGATAGACAATATTTTGGTGAGTGAATTAGAGCTTGCGTGTGATCTCAAGATTGGGAGGGTCCAAGTACCTTGAATTACTTTGCTTATCTTGTATTTTGGTTACTATTTATATCTCAAAATATTTGGGTTCTATCACATATATTTATTGTGCTAATAGTGTCCAAAACATATCCACCAAGTGTTGGAGTATCCAAGTGACACGAATACATTAGTCAAACTAAAGTGTTTGTGCCTCTTAGGACACTAATTACCAAGTGTTGGAGTATCCAAGTGACACGAACACGTGAGTCAAACTAAAGTGTTTGTGCCTCCTAGGACACTAATTACCAAGTGTTGGATCCAGGTGACATGAACACACTAGTCAAACTAAAGTGTTTGTGCCTCTTAGGACACTAATTACCAAGTGTTGGAGTATCCAAGTGACACGAACACATTAGTCAAACTAAAGTGTTCGTGCCTCTTAGGACATTAATTACCATCTCAAAGGTTGATGGTCAAATCCCCACCTCTGCAATTGTTGAACTCGGGAATAAAAAATTTCAGATTCATGTGATTTTTATCATGACAGATGCGAAAAGCTTCAGTGCCTGCATTGGAAGAAAAATATCCATCGGTGGACAGTGACTTCATTTCAGAACCATGTAGGACTAAGATGGCCCAGATTGAGTCTACGGTGGCTGAGATTTCTCCTTCGGTGCCAAAAAGGGTATATTGCTATTCACATTTTCTCTTTATATTCAAAGCCAAATTATGGTCAAATTTATCATTTTCTGGCCCCTTTTTCGGCCCTCTCTCGTTCTTCCTTGGCAACTGCAAAAACGATTCTACAAAACTTTTTTAAAGTGGAAGAAAGGCTTTTGTTAATTCTTCAATATTCAAACTGTGTTTTAGAAGTTTTCTTTGCTTTGTTTTGTTTGAGTTGACTGACTGTTGTAGGAAGAATAATGCATGCATGATTTTAATTTAAGAATTTTGTTTCCGTCTAATACTCATAATAAGTCCGTTTCACAACCATTTCATTTTTATTTTTGAAAATCAAGCCTATTTTCTCTCCGTTTCTTACCATGGTTTTCATCTTTCTTTAAGTAAATGAGTTGAATTTTTAGCCAATTTTTTTTAAAAAAATGTTTTTTAAATTTTGCTTTGTTTTTTAAGCAATGGTAGAAATTAGATAGCAAAACAATAAATTTAGAGGGGAGTATTTGTAAACTTAACTTTTGAAAATTAAAAATCTGAGACAAAATAGTTATCAATCGGATGTTACTTATTTCAGTATGATCTTAGTTTGTGTAGTTTGTATTTCATCTTGATCCAAGGCTACCCTTACCATTTGGATGTGAATTGTCTTTTTTGAAGAAACTAGTCAAATCCTTTGCTCATGGTTTTTGCTTTCTTCAATAATGATATTAATAATTTTAACTGAGCACAAATGAATTAATGATTCGTTCTTTGTTTTGTGTTCGATCTAGAAAGTTTGTTTGGAAGAGGAGCAACATTGGCTCGAGCATGAAATTCTGACTCGACTACTTGATGACAGTGTAGTAGGTCATTCCGAGTGCATATTTTCATTTTCTTTAATAGAATATTGAAGTTTTTGAATGTTTTTTTTTAGTTCAACAAGTGTGGTGCTAGAAATTAGAATCTTTCACCTTATGTGAAGTCATTAATATTTTAATTGATTGAATTATGCTATTGTTGGCTTAGAACATTGGTTTGAGAAACATCAATTAGACAACTATGAGCACATCGTTATTTGTCATGAGTTTGGATGGTTTTTAGGAGGGCTAAAAGTTTTTAGTCCATTAAGAATAATTTTCAACATTTCTATTATTTTTGGACGGATAAACAAAAATGATCAATCATAATTTGAACTTTTAAGTTTTTATGTATTCGGTTTCACCCTACAAATTTAGCCATTAGTTTTTTATTTTTTAAAATTTAAAATCTACCATGCACACAATTTAAAAGTTTAGGGTTCTATTATAAATGAAATTTATATTTATATTTAATAGATCGAATGATCTTTCAAAAAATTTAATTTATCAAGTACTTATTTAATCACAAAATTGAAAGTTCAATAATATTTTTAAAATATATATATTTTTAATTTTAGGGATGAATATAGACACAAATCTTAAAATTCAAGATTAAATTTGTAATTTAACCTATAACAGAGTATTTATAACTTTAGTTCTAAAAAAAAAAGTTGAAAATAAAAAAAAAAAGTTGCGCAATAACTAGCTGCAATTAATCTCATATATTCCATTTTCCTTACTCCAAAAAAATAATAATAATTCAATTTAAAAAAAAAATTGTCAATATCAAATTTTTATAGTGTATGCACAAAAATGGGTACAATCCAAATCATATTCAATTTTTTGTTTTTTTAATTTTTTTAAAAAAATATGTATACAATAAACGTTTCACTAAAAATCATTTTCATTTTTTGAAAAATCATCCCAAACTCACTATTAAACGACCATGGTCGTGAAAATGAGATGAGAGTTTTCATGTGAGATTATGTAAGGCAATGAAGAAAATTGAAGTCCCCACAATTTCAGCCTAAAAGTCCAATAAATGAAAAGGAAAGGCGAAGCAATTTGTTTGATACCACAAGGCATTGCAAATTGGGTGGAAGAGACAAAAGAGAAAGAGCATTATGAGCAACAAAAAATGGAAAAAAGTTAA ATGCTGATCTTCTCTAAGTTTATTTATAGACTCGAAGTCATAGACCGTGCTGCATTACGGCCCTGTGTAGATTTAGATGCTATTGGGAAAATGGAGGCATGTGTAGATTTTAATGGGGCTGATGTTGCTGATATGATGCGAAAAGCTTCAGTGCCTGCATTGGAAGAAAAATATCCATCGGTGGACAGTGACTTCATTTCAGAACCATGTAGGACTAAGATGGCCCAGATTGAGTCTACGGTGGCTGAGATTTCTCCTTCGGTGCCAAAAAGGAAAGTTTGTTTGGAAGAGGAGCAACATTGGCTCGAGCATGAAATTCTGACTCGACTACTTGATGACAGTGTAGTAGGTCATTCCGAGAAAGGCGAAGCAATTTGTTTGATACCACAAGGCATTGCAAATTGGGTGGAAGAGACAAAAGAGAAAGAGCATTATGAGCAACAAAAAATGGAAAAAAGTTAA ATGCTGATCTTCTCTAAGTTTATTTATAGACTCGAAGTCATAGACCGTGCTGCATTACGGCCCTGTGTAGATTTAGATGCTATTGGGAAAATGGAGGCATGTGTAGATTTTAATGGGGCTGATGTTGCTGATATGATGCGAAAAGCTTCAGTGCCTGCATTGGAAGAAAAATATCCATCGGTGGACAGTGACTTCATTTCAGAACCATGTAGGACTAAGATGGCCCAGATTGAGTCTACGGTGGCTGAGATTTCTCCTTCGGTGCCAAAAAGGAAAGTTTGTTTGGAAGAGGAGCAACATTGGCTCGAGCATGAAATTCTGACTCGACTACTTGATGACAGTGTAGTAGGTCATTCCGAGAAAGGCGAAGCAATTTGTTTGATACCACAAGGCATTGCAAATTGGGTGGAAGAGACAAAAGAGAAAGAGCATTATGAGCAACAAAAAATGGAAAAAAGTTAA MLIFSKFIYRLEVIDRAALRPCVDLDAIGKMEACVDFNGADVADMMRKASVPALEEKYPSVDSDFISEPCRTKMAQIESTVAEISPSVPKRKVCLEEEQHWLEHEILTRLLDDSVVGHSEKGEAICLIPQGIANWVEETKEKEHYEQQKMEKS Homology
BLAST of ClCG08G008540 vs. NCBI nr
Match: XP_022925018.1 (cell division control protein 48 homolog C-like [Cucurbita moschata]) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. NCBI nr
Match: KAG6595581.1 (Cell division control protein 48-like C, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. NCBI nr
Match: KAG7027563.1 (Cell division control protein 48-like C, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. NCBI nr
Match: XP_022966176.1 (cell division control protein 48 homolog C-like [Cucurbita maxima]) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. NCBI nr
Match: XP_023544703.1 (cell division control protein 48 homolog C-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 66.2 bits (160), Expect = 2.7e-07 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy Swiss-Prot
Match: Q9SS94 (Cell division control protein 48 homolog C OS=Arabidopsis thaliana OX=3702 GN=CDC48C PE=2 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 2.9e-04 Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy TrEMBL
Match: A0A6J1HNM4 (cell division control protein 48 homolog C-like OS=Cucurbita maxima OX=3661 GN=LOC111465932 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.7e-08 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy TrEMBL
Match: A0A6J1EE28 (cell division control protein 48 homolog C-like OS=Cucurbita moschata OX=3662 GN=LOC111432390 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 7.7e-08 Identity = 39/89 (43.82%), Postives = 60/89 (67.42%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy TrEMBL
Match: A0A1S3BGW4 (cell division control protein 48 homolog C-like OS=Cucumis melo OX=3656 GN=LOC103489883 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 40/89 (44.94%), Postives = 59/89 (66.29%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy TrEMBL
Match: A0A1S4E1S2 (cell division control protein 48 homolog C-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497490 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.9e-07 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of ClCG08G008540 vs. ExPASy TrEMBL
Match: A0A5A7TR89 (Cell division control protein 48-like protein C-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001970 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.9e-07 Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of ClCG08G008540 vs. TAIR 10
Match: AT3G01610.1 (cell division cycle 48C ) HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05 Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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