ClCG08G008460 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTCTCTCTTGCATATACAAACACTTGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAAGTACAGAGTTTTCCATTTTGTCCATTCCTTCTCCTCAAATTTTCACCTTTCAACATATCCCAGAAAGATTTTTTTCGATGTCAAGCCAGATCGTAACTCCAAATCGGAGATCCGTAACTCAACCAAATCAACAGTTTTTTCCAGATAAAAGATGGGAGGATGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTAAATTTGGCTAAAGTTAACTAGATTGATATAGATTTGTGTGTATAAATTAATTACGTTCGTTCGATTTGGTGTAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA ATGCTTCTTCTCTCTTGCATATACAAACACTTGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGATGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA ATGCTTCTTCTCTCTTGCATATACAAACACTTGCTATACCCTTCTAATTCATTCTTTGGTGGTGGATTGAAGCAATTTCAATTTTTTCCAGATAAAAGATGGGAGGATGATGAAGAAAATAACCAAATGTCATTGAGCATGGTACTTCCAGGTTTTTCAAAAGATCGACTACGAATCAACTTGAATACAAGAACAAGGACTCTTATAGTTACGGGACAAAAATCAGATGGCTTATTCAATATTATGCGTTTGAACGAACGCATACAAATCAACGAAGCATGCTCATTAGATGGAGTACATGCAAAATTACTCAACAACAATCTGTATATTACATTTCCCAAAAACAGATAA MLLLSCIYKHLLYPSNSFFGGGLKQFQFFPDKRWEDDEENNQMSLSMVLPGFSKDRLRINLNTRTRTLIVTGQKSDGLFNIMRLNERIQINEACSLDGVHAKLLNNNLYITFPKNR Homology
BLAST of ClCG08G008460 vs. NCBI nr
Match: KAE8646641.1 (hypothetical protein Csa_005322 [Cucumis sativus]) HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of ClCG08G008460 vs. NCBI nr
Match: KAG7016359.1 (hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 53/89 (59.55%), Postives = 66/89 (74.16%), Query Frame = 0
BLAST of ClCG08G008460 vs. NCBI nr
Match: XP_022939359.1 (uncharacterized protein LOC111445297 [Cucurbita moschata]) HSP 1 Score: 105.1 bits (261), Expect = 4.0e-19 Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of ClCG08G008460 vs. NCBI nr
Match: KAG6602241.1 (hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 68.6 bits (166), Expect = 4.2e-08 Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of ClCG08G008460 vs. NCBI nr
Match: XP_018475449.1 (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus]) HSP 1 Score: 59.7 bits (143), Expect = 1.9e-05 Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 0
BLAST of ClCG08G008460 vs. ExPASy TrEMBL
Match: A0A0A0KB53 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046370 PE=3 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 5.3e-25 Identity = 60/90 (66.67%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of ClCG08G008460 vs. ExPASy TrEMBL
Match: A0A6J1FGX8 (uncharacterized protein LOC111445297 OS=Cucurbita moschata OX=3662 GN=LOC111445297 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.9e-19 Identity = 52/89 (58.43%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of ClCG08G008460 vs. ExPASy TrEMBL
Match: A0A6J0MTF1 (inactive protein RESTRICTED TEV MOVEMENT 2-like OS=Raphanus sativus OX=3726 GN=LOC108846742 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 9.4e-06 Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 0
BLAST of ClCG08G008460 vs. ExPASy TrEMBL
Match: A0A067ECS7 (SHSP domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035730mg PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04 Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of ClCG08G008460 vs. ExPASy TrEMBL
Match: V4VZG1 (SHSP domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10016030mg PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.4e-04 Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of ClCG08G008460 vs. TAIR 10
Match: AT4G27670.1 (heat shock protein 21 ) HSP 1 Score: 44.3 bits (103), Expect = 7.8e-05 Identity = 24/90 (26.67%), Postives = 49/90 (54.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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