ClCG08G006950 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G006950
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProtein ROOT PRIMORDIUM DEFECTIVE 1
LocationCG_Chr08: 19355675 .. 19359948 (+)
RNA-Seq ExpressionClCG08G006950
SyntenyClCG08G006950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGATCAAATATTTGGTGGGCCGACATTTGGCAAATGCTTTTCTGCTTCCTCAGCCTAAAACGCACCTCCGATCACCAATGACGCCGGTCCGATTCAAAGCCATCGCTATTTCCGGCGACAGAAGCAAAACCAATTACCCCACTTCTACAATTCTACTTAGTCAGGTAAATAGAAACCAGAATTTCTAGTTCTTTAACCCTTTTCTGTCGGACGCTTTGATTTCTACTTGAAACTTTCATTTCTAGGAACTTTCTCAAGCTGTTTAATCTTTTACTTTTCTGGGTTTTTAATTATAGTTGCCGTCTTTGACTTTGGAATGTTCATTTCGAATCTCTTTTGCCCGAATTAATGTTTGCACTGATTTCTTAGATTATGTATTTTGATTATGTGTTTTATGTGTATGTTCCTTTGCGGGATTCCGAACCCCCTTTTACTGGGTTGTTTTAAGTGTGTCAGCTCTGGGTTTGAGTTTCTGGTGTCTCCTTTTCCCTTGTATTTGACTGTCATCATCTGTTGAACTTCATTTTTTGCCTTACATTTTGTTAGGTACTGAAAATTCTTGATGTGGTCATGATTATTTTTGCAAATGTGGTCAATTTTGTTTGCTTTTCATCTCGATCAACCTAAGCATACTTCAACCAAAAGGTCAGAAGTTCAGATCCCTATGAAATCATAGATATCTCTGTGGGCGAAGTTGAGAGTTAAAAGTAATAACTGGTTACAAAATATAATTTCTTTTTCCGGATTATAATTTTCTATAGTGATACATAAAATTCTATGGATATCATTTCTTTATGCAGGATAGAAATTTCAAAAGTAAGCCATGAAATTCTTTGGGTGCTTGGTCCCATTTTGACTACTATAGTGCACAAAGCAACAAACATACAACTATTTGTAGTTGTTTGATTTGAAAGAGAAAGATCTACCAGAATGGTACATGTTAGACTTGGATATAACAGTCCTTTAGGGAGTGTTTGATTGAGTTTCATTTGTATAGTCTAGGATTAAGAAACTTGAGTTTGCTTATGTGAAGTTACAAGTTCACAAATCTAGGTTTCTGAAATCCATTTCTTTCACAATGCAAACAGATTATGTGAACCCAAGCTTCCTAACATGAGGATTGTTAAAGAAAAGGAAAAAAAATGCCTGGGAAATATTCCCTTAGAGTTCTTCAAGTCTTAGTAGATAGTAAAAACGACATCTCAAATCAAATCTTCGTTCATATAGAGGTGATAGTTGATACTCACATCCACTGTTTCACATAGAATCTCAGAACTTGATTAACTTGCAGGAGATCCACCTTTGGTTTGTTTGAATGTTCTGTTTGCTGTAAATATTATTTGTTCCTTTCAATTTCATCATATTGGAATGTTTCAGTTAGCAGTTAGCACTGTACTAAATATTGGACGTATTAATTCTTTTCATTTTTATGCTAATGTGGTCAGTTTCCAAATTTTGGGGTTATGATATTTTTTGGCAAATGTGGTCGATTTTGTTTGCCTTTCATCTCAATTAACCTAAGCATAGTTCAAATGGTTAAGACATACTTTCAACCAAAATGTCAGATGTCATATTCTAGCATAGTCTAGATATCTTTGCAGGAGAAGTTGAGAGTTAAAGTAATAACTTGTTACAAAATATAGTTTCTTTTTTCGGATTATAATTTTCAATGGTAATCCATGAAATTCTATGGATGTCATTTCTTTACGCAGGTTAGAATTTTCAAAAGAAACCCATGAAATTCAATGGGGGCTTGGTCCCATTTTGACTACTTTAGTGGAAAAACCAATAAACATGCAACTATTTGTAGTTGAAAGATTAGAAAGAGAAAAATCTACAAGATTGGAACAGGTTAGACCAGGTATATGACAATCCTGTAGGGAGTGTTTGATTCATGATTTAGATTTGTATAATCTAGGATCAAGAAACTTGAGTTTACTTATTCCTAGCCCATCTGCTGCATAAAATCAAGCTTATAAAATTTACATTATACACTGCAAGCGCCTTTTATGAACACATTACCAAACATAGATTTCACAAATCTAGGTTTCTGAAATCCATTTTGTTTACAATGCAAACAGACTACGTGAACCCAAGCTTCCTAACGTGAGGTTGTTAAAGAAAAAGAAATTTGCAAGGGAAATAAAATCTTGGTTCATGTAGAGGTGATACTCATATCCACTGTTTCACATAGAATTTCAAAACTTGATTAACTTGCAAGAAATCCAACTTTGGTTTGTTTGAATTTTCTGTTAGCTGTAAATATAATTTGTTCCTTTCAATTTCACCATATTGGAATGTTTCAGTCAGCACTGCTCTAAATATTGAAAATATTAGTTCTTTTAATTCTTATGCGATGTGTAATGTCCCGTGTTTTTGGATAAAACTAATTCCAACTGTTTGAGCGTATTAGGATTTTATCTTGTCTGATTAAGTTGGAGTTGATTTGATTAACTAGAATTGTTACCTGGAGTTATCATTGGATTTTTTTATTAAGTTTAAAAATCCAAATTTTATAACCTATGTTTTCCCTTAAGATCTTACCCAAATAATTTTGGAGCTTTTGACTTTAGAATTTGAAAAGGAAGGGGTGGAAAATAGGACGGACACTCTCCAAATGGTCAATCATATGGCTTACTTTCAGTATCACCAGTAATATAACTTTGTGGTATGATTTGTCATTGAATTTTTTTGGTGGACTTGATCTTGAACCATTTGACTTGCCATTTTATTGCTAATTTAATCTTTGGGATAAGGAAAATTATGTTTTCAGTTCTTGATGACTGAAACCGATGATAGTGTGGCAGGCTTGTATTTTCTCTCGACGATTTGTACCCCTACTCAACACAACTAATGATCACCTGTTTAATTGCTTTCGTTTGCTTTTTTCATGGAACATATTCTTTTTCCTTCTTTACCTGTTTCATTTAGATCCTTACAATGTGTTTTGTTCAATTCAATCATCTTCCCACAGGCGTGTCTCTGCCACGAGAGTCTAGACATATGATGGTATTCGAACCATCGATAAATGATGTATAAAATACTGCAGAAGTTCATGTATTGGAATCCTAGGCTCTCTTCTTCTTATGCCCTCAAATACTTCCTTAGGAACTTTTCTCTATGGTCAATGAAGAAAGATCCAGACCTTGAATCAGCTCTATCTCGTAATCGTCGATGGATTGTCAATAACCAAATCAAGAATATCATCCTTCGTTGCCCCGATCAGGCAGCACCTGTAAAATTTCTCCAAAAGAAGTTCAAAACCCTCGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTACCCTTGCTGCTTTGAAGTTTATCTCCACAATGATGAGCACTACTTTCGGCTAACAAAGAGGATGATGGCTTTGGTTGAAGAGGAAGAAGCTGTCAAAGATATGCAGGAGCCTGCTATTGTCAAACGGTTGGCAAAGTTGCTGATGATGGCTTCAAATCAGAGACTAAATGTTGTAAAACTTGGTGAATTAAGGCGGAATTTTGGGCTCTCAGATGACTACTTGATAAGAATCGTTCCCAAACATTCAGATATGTTTCGAATTGTAAATTATACTGGAAAAAAGAACTCAATGGAAATAGAACTGATCACTTGGAAACCAGAACTAGCAATTTCCAGCATAGAATCTTCAGCTTCCAAGCAGGGAGTTGACCCAGCTTTCTCCTGCTCATTGCCAACTACTTGGATAAATTCATGGGAAAAGTTTCATGAATTTAATGCCTCTCCATATGTTTCACCATATGTAAACCCTGCAGGCTTGGTGCAAGGTTCAAAGGAGATGGAAAAGAGGACAGTGGGGTTGATTCATGAGATATTGTCGTTGACATTATGGAAGAAAGCATCGATTGTGAAGCTTGGACATTTCAGCAAGGAATTTGGTCTGCCATTGAAGTTGAATGCACTGCTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATTTACACTGTTGTTCTTAGAGAAGGGTATAATGGATCAGAACTAATTGAGAAAGATCCATTAGTGGTTGTCAAGGAGAAGTTTGGAGAACTGATGCAGGAGGGACTTCATGAATTTAACAAACGACATCATTTGATGAATTTAGAAAAGAAGAGAATGAAGGGAATGCTTTTGGGTAGATCAGAAAAGAACAAGAGGAAAGATTTTGAACCAGATGATCCTGATGGCCAAGGAAACAATCTAGGAGGTTTACTTGAGCCAGAAGAAAGGAAGAGATTCTATCAGTCTCTCTTTGATGAT

mRNA sequence

TGGATCAAATATTTGGTGGGCCGACATTTGGCAAATGCTTTTCTGCTTCCTCAGCCTAAAACGCACCTCCGATCACCAATGACGCCGGTCCGATTCAAAGCCATCGCTATTTCCGGCGACAGAAGCAAAACCAATTACCCCACTTCTACAATTCTACTTAGTCAGAAGTTCATGTATTGGAATCCTAGGCTCTCTTCTTCTTATGCCCTCAAATACTTCCTTAGGAACTTTTCTCTATGGTCAATGAAGAAAGATCCAGACCTTGAATCAGCTCTATCTCGTAATCGTCGATGGATTGTCAATAACCAAATCAAGAATATCATCCTTCGTTGCCCCGATCAGGCAGCACCTGTAAAATTTCTCCAAAAGAAGTTCAAAACCCTCGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTACCCTTGCTGCTTTGAAGTTTATCTCCACAATGATGAGCACTACTTTCGGCTAACAAAGAGGATGATGGCTTTGGTTGAAGAGGAAGAAGCTGTCAAAGATATGCAGGAGCCTGCTATTGTCAAACGGTTGGCAAAGTTGCTGATGATGGCTTCAAATCAGAGACTAAATGTTGTAAAACTTGGTGAATTAAGGCGGAATTTTGGGCTCTCAGATGACTACTTGATAAGAATCGTTCCCAAACATTCAGATATGTTTCGAATTGTAAATTATACTGGAAAAAAGAACTCAATGGAAATAGAACTGATCACTTGGAAACCAGAACTAGCAATTTCCAGCATAGAATCTTCAGCTTCCAAGCAGGGAGTTGACCCAGCTTTCTCCTGCTCATTGCCAACTACTTGGATAAATTCATGGGAAAAGTTTCATGAATTTAATGCCTCTCCATATGTTTCACCATATGTAAACCCTGCAGGCTTGGTGCAAGGTTCAAAGGAGATGGAAAAGAGGACAGTGGGGTTGATTCATGAGATATTGTCGTTGACATTATGGAAGAAAGCATCGATTGTGAAGCTTGGACATTTCAGCAAGGAATTTGGTCTGCCATTGAAGTTGAATGCACTGCTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATTTACACTGTTGTTCTTAGAGAAGGGTATAATGGATCAGAACTAATTGAGAAAGATCCATTAGTGGTTGTCAAGGAGAAGTTTGGAGAACTGATGCAGGAGGGACTTCATGAATTTAACAAACGACATCATTTGATGAATTTAGAAAAGAAGAGAATGAAGGGAATGCTTTTGGGTAGATCAGAAAAGAACAAGAGGAAAGATTTTGAACCAGATGATCCTGATGGCCAAGGAAACAATCTAGGAGGTTTACTTGAGCCAGAAGAAAGGAAGAGATTCTATCAGTCTCTCTTTGATGAT

Coding sequence (CDS)

ATGACGCCGGTCCGATTCAAAGCCATCGCTATTTCCGGCGACAGAAGCAAAACCAATTACCCCACTTCTACAATTCTACTTAGTCAGAAGTTCATGTATTGGAATCCTAGGCTCTCTTCTTCTTATGCCCTCAAATACTTCCTTAGGAACTTTTCTCTATGGTCAATGAAGAAAGATCCAGACCTTGAATCAGCTCTATCTCGTAATCGTCGATGGATTGTCAATAACCAAATCAAGAATATCATCCTTCGTTGCCCCGATCAGGCAGCACCTGTAAAATTTCTCCAAAAGAAGTTCAAAACCCTCGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTACCCTTGCTGCTTTGAAGTTTATCTCCACAATGATGAGCACTACTTTCGGCTAACAAAGAGGATGATGGCTTTGGTTGAAGAGGAAGAAGCTGTCAAAGATATGCAGGAGCCTGCTATTGTCAAACGGTTGGCAAAGTTGCTGATGATGGCTTCAAATCAGAGACTAAATGTTGTAAAACTTGGTGAATTAAGGCGGAATTTTGGGCTCTCAGATGACTACTTGATAAGAATCGTTCCCAAACATTCAGATATGTTTCGAATTGTAAATTATACTGGAAAAAAGAACTCAATGGAAATAGAACTGATCACTTGGAAACCAGAACTAGCAATTTCCAGCATAGAATCTTCAGCTTCCAAGCAGGGAGTTGACCCAGCTTTCTCCTGCTCATTGCCAACTACTTGGATAAATTCATGGGAAAAGTTTCATGAATTTAATGCCTCTCCATATGTTTCACCATATGTAAACCCTGCAGGCTTGGTGCAAGGTTCAAAGGAGATGGAAAAGAGGACAGTGGGGTTGATTCATGAGATATTGTCGTTGACATTATGGAAGAAAGCATCGATTGTGAAGCTTGGACATTTCAGCAAGGAATTTGGTCTGCCATTGAAGTTGAATGCACTGCTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATTTACACTGTTGTTCTTAGAGAAGGGTATAATGGATCAGAACTAATTGAGAAAGATCCATTAGTGGTTGTCAAGGAGAAGTTTGGAGAACTGATGCAGGAGGGACTTCATGAATTTAACAAACGACATCATTTGATGAATTTAGAAAAGAAGAGAATGAAGGGAATGCTTTTGGGTAGATCAGAAAAGAACAAGAGGAAAGATTTTGAACCAGATGATCCTGATGGCCAAGGAAACAATCTAGGAGGTTTACTTGAGCCAGAAGAAAGGAAGAGATTCTATCAGTCTCTCTTTGATGAT

Protein sequence

MTPVRFKAIAISGDRSKTNYPTSTILLSQKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPYVNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD
Homology
BLAST of ClCG08G006950 vs. NCBI nr
Match: XP_038886354.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886355.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886356.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886357.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 784.3 bits (2024), Expect = 5.6e-223
Identity = 382/409 (93.40%), Postives = 396/409 (96.82%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+PR SS Y LKYFLRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKLRYWDPRFSSPYVLKYFLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           A PVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDE YFRLTKRMMALVEEEEAVKD
Sbjct: 67  ATPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDERYFRLTKRMMALVEEEEAVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEP +VKRLAKLLMMASNQRLNVVKLGEL++NFGLSDDYLIRIVPK+SDMFRIVNYTGK
Sbjct: 127 MQEPVVVKRLAKLLMMASNQRLNVVKLGELKQNFGLSDDYLIRIVPKYSDMFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAIS+IESSA K GV+PAFSCSLPTTW+NSWEKFHEFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISNIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
            NPAGLVQG+KEMEKR VGLIHEILSLTLWKKASI+KLGHFS+EFGLPLKLNALLLKHPG
Sbjct: 247 ENPAGLVQGTKEMEKRIVGLIHEILSLTLWKKASIIKLGHFSREFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGS+LIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSKLIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. NCBI nr
Match: KAA0054949.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK22738.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 769.2 bits (1985), Expect = 1.9e-218
Identity = 378/409 (92.42%), Postives = 393/409 (96.09%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL+NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNV+KL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHFSKEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRSEKNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. NCBI nr
Match: KAG7016419.1 (Vacuolar iron transporter-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 769.2 bits (1985), Expect = 1.9e-218
Identity = 375/423 (88.65%), Postives = 402/423 (95.04%), Query Frame = 0

Query: 15  RSKTNYPTSTILLSQKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIV 74
           + +TN+PTST LL+QK  +W+PRLSS Y+LK FLRNFSLWSMKKDPDLESALSRNRRWIV
Sbjct: 242 KKQTNHPTSTTLLTQKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIV 301

Query: 75  NNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTK 134
           NNQIKNI+LRCP+Q APVKFLQKKFKTLD QGKALNWLKKYP CFEVYLHNDE+YFRLTK
Sbjct: 302 NNQIKNIVLRCPNQTAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTK 361

Query: 135 RMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVP 194
           RMMALVEEEE +KDMQEPA V+RLAKLLMMASNQRLNV+KLGEL+R FGL DDYLIRIVP
Sbjct: 362 RMMALVEEEETIKDMQEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVP 421

Query: 195 KHSDMFRIVNYTGKKNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWE 254
           KHSDMFRIVNYTGK+NSMEIEL++WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWE
Sbjct: 422 KHSDMFRIVNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWE 481

Query: 255 KFHEFNASPYVSPYVNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFG 314
           KFHEFNASPY+SPY N AGLV+ +KEMEKRTVGLIHEILSLTLWKKASI+KLGHFS+EFG
Sbjct: 482 KFHEFNASPYISPYANHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFG 541

Query: 315 LPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLH 374
           LPLKLNALLLKHPGIFYVSNKYQIYTV+LREGYNGSELIEKDPLVVVKEKFGELMQEGLH
Sbjct: 542 LPLKLNALLLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLH 601

Query: 375 EFNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSL 434
           E+N+RHHLMNLEKKRMKGMLLGRSEKNKRKD EPDD D QGNNLGGLLEPEERKRFYQSL
Sbjct: 602 EYNRRHHLMNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNNLGGLLEPEERKRFYQSL 661

Query: 435 FDD 438
           FDD
Sbjct: 662 FDD 664

BLAST of ClCG08G006950 vs. NCBI nr
Match: XP_011656637.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN46146.1 hypothetical protein Csa_005696 [Cucumis sativus])

HSP 1 Score: 768.8 bits (1984), Expect = 2.4e-218
Identity = 378/409 (92.42%), Postives = 392/409 (95.84%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYILRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNVVKL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHF+KEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRSEKNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. NCBI nr
Match: XP_016899452.1 (PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 757.7 bits (1955), Expect = 5.6e-215
Identity = 372/409 (90.95%), Postives = 388/409 (94.87%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL+NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNV+KL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHFSKEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKG   G+  KNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGXAFGQIRKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.0e-34
Identity = 105/373 (28.15%), Postives = 185/373 (49.60%), Query Frame = 0

Query: 16  SKTNYPTSTILLSQKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVN 75
           +++ +    ++L  K+ +W+    +   ++      +    +K+   +S + R+++  + 
Sbjct: 41  ARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVR---AAVKRRKELTFDSVVQRDKKLKLV 100

Query: 76  NQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKA--LNWLKKYPCCFEVYLHNDEHY-FRL 135
             I+ I++  PD+   ++ L K  + L L+ +   +  L+KYP  FE+         F++
Sbjct: 101 LNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKM 160

Query: 136 TKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRI 195
           T     L  +E  +++  E  +V +L KL+MM+ ++R+ + K+  L+ + GL  ++   I
Sbjct: 161 TSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTI 220

Query: 196 VPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIESSASKQGV------------DPA 255
             ++   FR+V          +EL  W PELA+S+ E S                   P 
Sbjct: 221 CQRYPQYFRVV---PTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPK 280

Query: 256 FSCSLPTTWIN----SWEKFHEFNASPYVSPYVNPAGLVQGSKEMEKRTVGLIHEILSLT 315
           F+       +N       K  +F    Y+SPY + + L  G+ E EK   G+IHE+LSLT
Sbjct: 281 FNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLT 340

Query: 316 LWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKD 370
             K+  +  L HF +EF    +L  +L++HP +FYVS K +  +V LRE Y  SELI+KD
Sbjct: 341 TEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKD 400

BLAST of ClCG08G006950 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 6.0e-34
Identity = 101/332 (30.42%), Postives = 169/332 (50.90%), Query Frame = 0

Query: 57  KKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGK--ALNWLKK 116
           +K+   ++ + R+++  +  +++NI++  PD+   ++ L +  + L L  K   +  LK+
Sbjct: 64  RKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKR 123

Query: 117 YPCCFEVYLHNDEHY-FRLTKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVV 176
           +P  FEV         FRLT     L  +E  +K+  E   V +L KLLMM+ ++R+ + 
Sbjct: 124 FPGVFEVVEEGVYSLRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRILIE 183

Query: 177 KLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSI----E 236
           K+  L+ + GL  ++   I  ++   FR+V          +EL  W PELA+S+     E
Sbjct: 184 KIAHLKNDLGLPPEFRDTICLRYPQYFRVVQ---MDRGPGLELTHWDPELAVSAAEVAEE 243

Query: 237 SSASKQGVDPAFSCSLPTTW------------INSWEKFHEFNASPYVSPYVNPAGLVQG 296
            + +++  +       P  +                 +  +F   PY+SPY + + L  G
Sbjct: 244 ENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSG 303

Query: 297 SKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQ 356
           S E EK   G++HEILSLTL K+  +  L HF +EF     L  +L++HP +FYVS K  
Sbjct: 304 SAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGD 363

Query: 357 IYTVVLREGYNGSELIEKDPLVVVKEKFGELM 370
             +V LRE Y  S+L+EK  LV++KEK   L+
Sbjct: 364 RDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392

BLAST of ClCG08G006950 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.6e-33
Identity = 108/376 (28.72%), Postives = 186/376 (49.47%), Query Frame = 0

Query: 57  KKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGK--ALNWLKK 116
           +K+   ++ + R+++  +  +++NI++  PD+   ++ L +  + L L  K   +  L++
Sbjct: 58  RKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRR 117

Query: 117 YPCCFEVYLHNDEHY-FRLTKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVV 176
           +P  F+V         FRLT     L  +E  +++  E   V +L KLLMM+  +R+ + 
Sbjct: 118 FPGVFDVVEEGVYSLRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILIE 177

Query: 177 KLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSI----E 236
           K+  L+ + GL  ++   +  ++   FR+V          +EL  W PELA+S+     E
Sbjct: 178 KVAHLKHDLGLPPEFRDTVCLRYPQYFRVVR---MDRGPALELTHWDPELAVSAAELAEE 237

Query: 237 SSASKQGVDPAFSCSLPTTW------------INSWEKFHEFNASPYVSPYVNPAGLVQG 296
            S +++  +       P  +                 +   F   PY+SPY + + L  G
Sbjct: 238 ESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRSG 297

Query: 297 SKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQ 356
           S E EK   G++HEILSLT+ K+  +  L HF +EF     L  ++++HP +FYVS K  
Sbjct: 298 SDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKGD 357

Query: 357 IYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHL-MNLEKKRMKGMLLG 413
             +V LRE Y  S+L+EK+ LV++KEK   L+   +  F +R  +    E + M G L  
Sbjct: 358 RDSVFLREAYKDSQLVEKNQLVLLKEKMRALV--AVPRFPRRAAVGTGEEAEGMNGSLQS 417

BLAST of ClCG08G006950 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.6e-31
Identity = 100/315 (31.75%), Postives = 166/315 (52.70%), Query Frame = 0

Query: 80  NIILRCPDQAAPVKFLQKKFKTLDL---QGKALNWLKKYPCCFEVYLHNDEH--YFRLTK 139
           ++IL  P+    +  L    + L L   Q +   +L K+P  FE+Y H  +   Y RLT+
Sbjct: 70  SLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTR 129

Query: 140 RMMALV-EEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIV 199
           + +  +  E EAV D Q P  V RL KL+MM++  R+ +  +   R  FGL +D+   ++
Sbjct: 130 KALDQIRHEHEAVLD-QIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVI 189

Query: 200 PKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIES----SASKQGVDP-----AFSCS 259
            KH   FR+++    ++   IE++   P L+I +IE         +G+D      +F  +
Sbjct: 190 LKHPQFFRLIDGEETRDKY-IEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVN 249

Query: 260 LPTTW-INSWEKF--HEFNASPYVSPYVNPAGL----VQGSKEMEKRTVGLIHEILSLTL 319
            P  + I  + +    ++   PY SPY + +G     ++    +EKR+V  IHE+LSLT+
Sbjct: 250 FPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTV 309

Query: 320 WKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVS---NKYQIYTVVLREGYNGSELIE 370
            KK ++ ++ HF     LP KL   LL+H GIFY+S   N  +++TV LREGY   EL+E
Sbjct: 310 EKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVE 369

BLAST of ClCG08G006950 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.1e-27
Identity = 89/305 (29.18%), Postives = 147/305 (48.20%), Query Frame = 0

Query: 78  IKNIILRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEH--YFRLTKR 137
           +KN I++ P++  P+  + KK +  D+  K  ++L+K+P  FE ++  + +  +FRLT  
Sbjct: 55  LKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPE 114

Query: 138 MMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPK 197
              L  +E  V       +  RL KL++M+ +  L +  +  ++   GL DDYL      
Sbjct: 115 ATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMN 174

Query: 198 HSDMFRIVNYTGKKNSMEIELITWKPELAISSIESSASKQG----------VDPAFSCSL 257
               FR V+       + ++       L++    +   ++G          + P+  C L
Sbjct: 175 LDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRL 234

Query: 258 PTTWINSWEKFHEFNASPYVSPYVNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVK 317
               I  W    EF   PYVSPY + + L   S   EKR VG +HE+L L +   A   K
Sbjct: 235 RVK-IEDW--LMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKK 294

Query: 318 LGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKF 371
           L    K FGLP K++    +HP IFY+S K +  T +LRE Y     +E  P++ V++K+
Sbjct: 295 LLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKY 354

BLAST of ClCG08G006950 vs. ExPASy TrEMBL
Match: A0A5D3DGZ3 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00680 PE=4 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 9.0e-219
Identity = 378/409 (92.42%), Postives = 393/409 (96.09%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL+NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNV+KL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHFSKEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRSEKNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. ExPASy TrEMBL
Match: A0A0A0KEF0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.2e-218
Identity = 378/409 (92.42%), Postives = 392/409 (95.84%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYILRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNVVKL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHF+KEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRSEKNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. ExPASy TrEMBL
Match: A0A1S4DTX7 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103485622 PE=4 SV=1)

HSP 1 Score: 757.7 bits (1955), Expect = 2.7e-215
Identity = 372/409 (90.95%), Postives = 388/409 (94.87%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  YW+P LSS   LKY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIILRCPDQ
Sbjct: 7   QKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
           AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL+NDEHYFRLTKRMMALVEEEE VKD
Sbjct: 67  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLNNDEHYFRLTKRMMALVEEEEVVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPAIVKRL KLLMMASNQRLNV+KL ELRRNFGL DD+LIRI+PKHSD+FRIVNYTGK
Sbjct: 127 MQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPKHSDIFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           KNSMEIELI+WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKF+EFNASPYVSPY
Sbjct: 187 KNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
           VNPAGLVQG++EMEKRTVGLIHEILSLTLWKKASI+KLGHFSKEFGLPLKLNALLLKHPG
Sbjct: 247 VNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+NKRHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKG   G+  KNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 367 RMKGXAFGQIRKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. ExPASy TrEMBL
Match: A0A6J1FG34 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445385 PE=4 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 5.7e-213
Identity = 366/408 (89.71%), Postives = 389/408 (95.34%), Query Frame = 0

Query: 30  KFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQA 89
           K  +W+PRLSS Y+LK FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+LRCP+Q 
Sbjct: 8   KSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIVLRCPNQT 67

Query: 90  APVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKDM 149
           APVKFLQKKFKTLD QGKALNWLKKYP CFEVYLHNDE+YFRLTKRMMALVEEEE +KDM
Sbjct: 68  APVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHNDEYYFRLTKRMMALVEEEETIKDM 127

Query: 150 QEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKK 209
           QEPA V+RLAKLLMMASNQRLNV+KLGEL+R FGL DDYLIRIVPKHSDMFRIVNYTGK+
Sbjct: 128 QEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVPKHSDMFRIVNYTGKR 187

Query: 210 NSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPYV 269
           NSMEIEL++WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKFHEFNASPY+SPY 
Sbjct: 188 NSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNASPYISPYA 247

Query: 270 NPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGI 329
           N AGLV+ +KEMEKRTVGLIHEILSLTLWKKASI+KLGHFS+EFGLPLKLNALLLKHPGI
Sbjct: 248 NHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNALLLKHPGI 307

Query: 330 FYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKR 389
           FYVSNKYQIYTV+LREGYNGSELIEKDPLVVVKEKFGELMQEGLHE+N+RHHLMNLEKKR
Sbjct: 308 FYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNRRHHLMNLEKKR 367

Query: 390 MKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           MKGMLLGRSEKNKRKD EPDD D QGNNLGGLLEPEERKRFYQSLFDD
Sbjct: 368 MKGMLLGRSEKNKRKDSEPDDLDDQGNNLGGLLEPEERKRFYQSLFDD 415

BLAST of ClCG08G006950 vs. ExPASy TrEMBL
Match: A0A6J1K3L2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.4e-213
Identity = 366/409 (89.49%), Postives = 390/409 (95.35%), Query Frame = 0

Query: 29  QKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQ 88
           QK  +W+PRLSS Y+LK FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+LRCP+Q
Sbjct: 7   QKSRHWDPRLSSPYSLKCFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIVLRCPNQ 66

Query: 89  AAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKD 148
            APVKFLQKKFKTLD QGKALNWLKKYP CFEVYLH+DE+YFRLTKRMMALVEEEE VKD
Sbjct: 67  TAPVKFLQKKFKTLDCQGKALNWLKKYPICFEVYLHDDEYYFRLTKRMMALVEEEETVKD 126

Query: 149 MQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGK 208
           MQEPA V+RLAKLLMMASNQRLNV+KLGELRRNFGL DDYLIRIVPKHSDMFRIVNYTGK
Sbjct: 127 MQEPAFVERLAKLLMMASNQRLNVLKLGELRRNFGLPDDYLIRIVPKHSDMFRIVNYTGK 186

Query: 209 KNSMEIELITWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPY 268
           +NSMEIEL++WKPELAISSIESSA K GV+PAFSCSLPTTW+NSWEKFHEFNASPY+SPY
Sbjct: 187 RNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFHEFNASPYISPY 246

Query: 269 VNPAGLVQGSKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPG 328
              AGLV+ +KEMEKRTVGLIHEILSLTLWKKASI+KLGHFS+EFGLPLKLNALLLKHPG
Sbjct: 247 AIHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGLPLKLNALLLKHPG 306

Query: 329 IFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKK 388
           IFYVSNKYQIYTV+LREGYNGSELIEKDPLVVVKE+FGELMQEGLHE+N+RHHLMNLEKK
Sbjct: 307 IFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKERFGELMQEGLHEYNRRHHLMNLEKK 366

Query: 389 RMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
           RMKGMLLGRS+KNKRKDFEPDD D QGNNLGGLLEPEERKRFYQ LFDD
Sbjct: 367 RMKGMLLGRSKKNKRKDFEPDDLDDQGNNLGGLLEPEERKRFYQYLFDD 415

BLAST of ClCG08G006950 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 572.0 bits (1473), Expect = 4.1e-163
Identity = 277/405 (68.40%), Postives = 336/405 (82.96%), Query Frame = 0

Query: 38  LSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQK 97
           L + YA    +R FSLWS KKDPDLESALSRN+RWIVN+++KNIILRCP+Q A +KFLQK
Sbjct: 11  LGTKYA-PLLIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQK 70

Query: 98  KFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKDMQEPAIVKR 157
           KFKTLDLQGKALNWLKKYPCCF VYL NDE+Y RLTK MM LVEEEE VKD QEP +  R
Sbjct: 71  KFKTLDLQGKALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADR 130

Query: 158 LAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELI 217
           LAKLLM++ NQRLNVVKL E +R+FG  DDY+IRIVPK+SD+FR+VNY+G+K+SMEIEL+
Sbjct: 131 LAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELL 190

Query: 218 TWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPYVNPAGLVQG 277
            WKPELA+S++E++A K G +P+FSCSLP+TW   WE+F EFNA PY+SPY +   LV+G
Sbjct: 191 LWKPELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEG 250

Query: 278 SKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQ 337
           SKE EKR+VGL+HE+LSLTLWKK SIVKL HF +EFGLP KLN +LLKHPGIFYV NKYQ
Sbjct: 251 SKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQ 310

Query: 338 IYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKRMKGM---- 397
           ++TV+LREGYNGSELI KDPLVVVK+KFGELMQ+GL+E+N R +L NLEKKR KG+    
Sbjct: 311 VHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLK 370

Query: 398 -LLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
            ++ + ++N  +D + D+ +  G+  GGL +PEERKRFYQ LF D
Sbjct: 371 PVVRKKDRNHDRD-DVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

BLAST of ClCG08G006950 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 572.0 bits (1473), Expect = 4.1e-163
Identity = 277/405 (68.40%), Postives = 336/405 (82.96%), Query Frame = 0

Query: 38  LSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQK 97
           L + YA    +R FSLWS KKDPDLESALSRN+RWIVN+++KNIILRCP+Q A +KFLQK
Sbjct: 11  LGTKYA-PLLIRRFSLWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQK 70

Query: 98  KFKTLDLQGKALNWLKKYPCCFEVYLHNDEHYFRLTKRMMALVEEEEAVKDMQEPAIVKR 157
           KFKTLDLQGKALNWLKKYPCCF VYL NDE+Y RLTK MM LVEEEE VKD QEP +  R
Sbjct: 71  KFKTLDLQGKALNWLKKYPCCFHVYLENDEYYCRLTKPMMTLVEEEELVKDTQEPVLADR 130

Query: 158 LAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELI 217
           LAKLLM++ NQRLNVVKL E +R+FG  DDY+IRIVPK+SD+FR+VNY+G+K+SMEIEL+
Sbjct: 131 LAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELL 190

Query: 218 TWKPELAISSIESSASKQGVDPAFSCSLPTTWINSWEKFHEFNASPYVSPYVNPAGLVQG 277
            WKPELA+S++E++A K G +P+FSCSLP+TW   WE+F EFNA PY+SPY +   LV+G
Sbjct: 191 LWKPELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEG 250

Query: 278 SKEMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQ 337
           SKE EKR+VGL+HE+LSLTLWKK SIVKL HF +EFGLP KLN +LLKHPGIFYV NKYQ
Sbjct: 251 SKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQ 310

Query: 338 IYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKRMKGM---- 397
           ++TV+LREGYNGSELI KDPLVVVK+KFGELMQ+GL+E+N R +L NLEKKR KG+    
Sbjct: 311 VHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLK 370

Query: 398 -LLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLFDD 438
            ++ + ++N  +D + D+ +  G+  GGL +PEERKRFYQ LF D
Sbjct: 371 PVVRKKDRNHDRD-DVDEEENHGDRPGGLFDPEERKRFYQILFSD 413

BLAST of ClCG08G006950 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 206.8 bits (525), Expect = 3.4e-53
Identity = 121/356 (33.99%), Postives = 207/356 (58.15%), Query Frame = 0

Query: 57  KKDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYP 116
           KKD  L+ A+ +++R+ +  ++   +L  P Q  P+++L+K+ + L L  KA ++++  P
Sbjct: 39  KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNP 98

Query: 117 CCFEVYL------HNDEHYFRLTKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRL 176
             FE+Y        +   + R T R+ A ++EE+ +    EP +V +L +LLMMA ++ +
Sbjct: 99  SLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVI 158

Query: 177 NVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIES 236
           +  KL  ++R+FG  +D+L+++V K+ + FR+     +  S  +EL++W P+ A S IE 
Sbjct: 159 SADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSF-LELVSWNPDFAKSKIEL 218

Query: 237 SAS----KQGV--DPAFSCSLPTTW-----INSWEKFHEFNASPYVSPYVNPAGLVQGSK 296
            A     K GV   P ++  LP+ +     +  W +  ++    Y+SPY + + L Q SK
Sbjct: 219 RAEDETLKTGVRIRPNYNVKLPSGFFLRKEMREWTR--DWLEQDYISPYEDVSHLDQASK 278

Query: 297 EMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIY 356
           EMEKRTVG++HE+LSL+L K+  +  LG F  EF      +++  +H GIFY+S K  I 
Sbjct: 279 EMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIK 338

Query: 357 TVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKRMKGMLL 396
           T VLRE Y   EL+++DPL+ +K+KF  L++EG  E   R  L   + ++ + M+L
Sbjct: 339 TAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDRLKLQREQVQKDREMML 391

BLAST of ClCG08G006950 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 152.1 bits (383), Expect = 1.0e-36
Identity = 117/382 (30.63%), Postives = 185/382 (48.43%), Query Frame = 0

Query: 58  KDPDLESALSRNRRWIVNNQIKNIILRCPDQAAPV-KFLQKKFKT-LDLQGKALNWLKKY 117
           KD +L++ + R +       + ++I   PD   P+ K L  + +  L  + K   ++++Y
Sbjct: 41  KDRELDAVVVREKHLRAVCNLVSVISASPDLRLPIFKLLPHRGQLGLPQELKLSAFIRRY 100

Query: 118 PCCFEVYLHNDE-----HYFRLTKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRL 177
           P  F  + + D        F LT+  + L  EE  V  + E  ++ RL KLLM+   + L
Sbjct: 101 PNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNERDVLVRLCKLLMLTCERTL 160

Query: 178 NVVKLGELRRNFGLSDDYLIRIVPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIES 237
           ++  +  LR + GL  DY   ++ KH D+F +V  +   +   ++LI W   LA+S ++ 
Sbjct: 161 SLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG--LKLIHWDEHLAVSQMQ- 220

Query: 238 SASKQGVDPAFSCSLPTT-----------WINSWEKFHEFNASPYVSPYVNPAGLVQGSK 297
                G D   +  +  T           W+  W++       PY SPYV+ + L   + 
Sbjct: 221 LREDVGNDERMAFPVKFTRGFGLKRKSIEWLQEWQRL------PYTSPYVDASHLDPRTD 280

Query: 298 EMEKRTVGLIHEILSLTLWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIY 357
             EKR VG+ HE+L LT+ KK     + +  K F LP K   +  +HPGIFY+S K    
Sbjct: 281 LSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFERHPGIFYISMKCDTQ 340

Query: 358 TVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEFNKRHHLMNLEKKRMKGMLLGRSE 417
           TV+LRE Y+   LIEK PLV V+EKF  +M EG  + ++      L +K ++  L    E
Sbjct: 341 TVILREAYDRRHLIEKHPLVEVREKFANMMNEGFLDRSR-----GLYQKSVEADL----E 400

Query: 418 KNKRKDFEP---DDPDGQGNNL 419
           KN  K   P   D+ +   NNL
Sbjct: 401 KNNIKTSYPVWSDEEEELDNNL 404

BLAST of ClCG08G006950 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-35
Identity = 105/373 (28.15%), Postives = 185/373 (49.60%), Query Frame = 0

Query: 16  SKTNYPTSTILLSQKFMYWNPRLSSSYALKYFLRNFSLWSMKKDPDLESALSRNRRWIVN 75
           +++ +    ++L  K+ +W+    +   ++      +    +K+   +S + R+++  + 
Sbjct: 41  ARSQFMGEGLILGNKYGFWSTSRKTRVVVEPVR---AAVKRRKELTFDSVVQRDKKLKLV 100

Query: 76  NQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKA--LNWLKKYPCCFEVYLHNDEHY-FRL 135
             I+ I++  PD+   ++ L K  + L L+ +   +  L+KYP  FE+         F++
Sbjct: 101 LNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYSLRFKM 160

Query: 136 TKRMMALVEEEEAVKDMQEPAIVKRLAKLLMMASNQRLNVVKLGELRRNFGLSDDYLIRI 195
           T     L  +E  +++  E  +V +L KL+MM+ ++R+ + K+  L+ + GL  ++   I
Sbjct: 161 TSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTI 220

Query: 196 VPKHSDMFRIVNYTGKKNSMEIELITWKPELAISSIESSASKQGV------------DPA 255
             ++   FR+V          +EL  W PELA+S+ E S                   P 
Sbjct: 221 CQRYPQYFRVV---PTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPK 280

Query: 256 FSCSLPTTWIN----SWEKFHEFNASPYVSPYVNPAGLVQGSKEMEKRTVGLIHEILSLT 315
           F+       +N       K  +F    Y+SPY + + L  G+ E EK   G+IHE+LSLT
Sbjct: 281 FNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLT 340

Query: 316 LWKKASIVKLGHFSKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKD 370
             K+  +  L HF +EF    +L  +L++HP +FYVS K +  +V LRE Y  SELI+KD
Sbjct: 341 TEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKD 400

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038886354.15.6e-22393.40protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_0388... [more]
KAA0054949.11.9e-21892.42protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK22738.1 prote... [more]
KAG7016419.11.9e-21888.65Vacuolar iron transporter-like 4, partial [Cucurbita argyrosperma subsp. argyros... [more]
XP_011656637.12.4e-21892.42protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN46146.... [more]
XP_016899452.15.6e-21590.95PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis mel... [more]
Match NameE-valueIdentityDescription
A0MFS52.0e-3428.15Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL56.0e-3430.42Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV86.6e-3328.72Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D63.6e-3131.75Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ61.1e-2729.18Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A5D3DGZ39.0e-21992.42Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A0A0KEF01.2e-21892.42PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 S... [more]
A0A1S4DTX72.7e-21590.95LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656... [more]
A0A6J1FG345.7e-21389.71protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114453... [more]
A0A6J1K3L27.4e-21389.49protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 ... [more]
Match NameE-valueIdentityDescription
AT2G31290.14.1e-16368.40Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.24.1e-16368.40Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G63090.13.4e-5333.99Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.11.0e-3630.63Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.11.5e-3528.15Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 57..372
e-value: 1.8E-106
score: 355.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..425
NoneNo IPR availablePANTHERPTHR31476:SF5UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 39..427
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 39..427

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G006950.1ClCG08G006950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding