ClCG08G006680 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G006680
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr08: 19113043 .. 19113303 (+)
RNA-Seq ExpressionClCG08G006680
SyntenyClCG08G006680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTATCCAATGGCCTGTGTTTTAGTTGCACTTGCATTAACCCTGTCTCTCAGTTTTCCAATCTCCTCCACTTTCGCTGCTCAGCCTCACTCGCCACCGCGACCGTCGTCTACTCAGCCTCACTCGCCGCCGCACACACAAGGCTCACGACCGCTAACTAAGAAGAAATTCAAGCGCGTGCAACCGCCGTTAGCGCGGCCAATTAAGAAACCATATCCACCATTGTACGCGTCTAAATCACCTCCCCCTCCTTTCTAA

mRNA sequence

ATGAAGTATCCAATGGCCTGTGTTTTAGTTGCACTTGCATTAACCCTGTCTCTCAGTTTTCCAATCTCCTCCACTTTCGCTGCTCAGCCTCACTCGCCACCGCGACCGTCGTCTACTCAGCCTCACTCGCCGCCGCACACACAAGGCTCACGACCGCTAACTAAGAAGAAATTCAAGCGCGTGCAACCGCCGTTAGCGCGGCCAATTAAGAAACCATATCCACCATTGTACGCGTCTAAATCACCTCCCCCTCCTTTCTAA

Coding sequence (CDS)

ATGAAGTATCCAATGGCCTGTGTTTTAGTTGCACTTGCATTAACCCTGTCTCTCAGTTTTCCAATCTCCTCCACTTTCGCTGCTCAGCCTCACTCGCCACCGCGACCGTCGTCTACTCAGCCTCACTCGCCGCCGCACACACAAGGCTCACGACCGCTAACTAAGAAGAAATTCAAGCGCGTGCAACCGCCGTTAGCGCGGCCAATTAAGAAACCATATCCACCATTGTACGCGTCTAAATCACCTCCCCCTCCTTTCTAA

Protein sequence

MKYPMACVLVALALTLSLSFPISSTFAAQPHSPPRPSSTQPHSPPHTQGSRPLTKKKFKRVQPPLARPIKKPYPPLYASKSPPPPF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G006680.1ClCG08G006680.1mRNA