ClCG08G006420 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G006420
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr08: 18877301 .. 18878233 (-)
RNA-Seq ExpressionClCG08G006420
SyntenyClCG08G006420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTAGTTGATGTATGTTAATAGCTAGCCAAATATATCCTTTTTTTTATTTGGTTATTTATTATGTTGGTAAGTTTTGTGAGGAGATTTATATTGTTGGAAAGTTGTGGGTATTTTTGGGTTTTATGTTTTAGCTTGAAGTTTTGGTTTATATTTGGGTGCTGAAAAATTTTGTGTAAGAGTTGGACTAATAGGAGAAAAGTGAGAGTAATTATATGATAAAAAATGAGAATATCTTTATAATTTGTTTTAAAATTGGTTCTTTCCGAACTCAAGAAAACTTCAAACAAATTGATCACAATACAAGCATTTAAGGGTGTACACGGGTTGGGTTGGGTTGGGGGAATTTTTTGGACCAACCCGAAAATTCGGGTTGGTGGGGTTGCTAACCCGAATAGGGTACCCAACCCAACCCAACCGGGTTGGGTTGGGTTGGGTTGTTGGGTTGGAGTTTTTTCTTTCTTTCTTTCTTCTCTTTTCTTTTCTCCCAAAGACGAACCAACGGAGTGGTCATGATGGCAGACAAATGGCTTGATTTAAGGCTGATTGGCGACTGCTGTCGGATCGGAGACCGAGAGGAGAGCGAGACCGAGAGAAGAGGGAGAGGCTGACTGCGACTGGTGACGGCTTTCGGATCGGAGACCGAGAGGAGAGCGAGATCGAAAGGATAGCGAGACTAAAAGGAGAGTGACACTGCGAGTGTGAGAAGAGCGACACTGCGAGTCTGCGAGTGCGAGGAGAGCAACAGCGAGAGGAAATGGAAACAACGAGGAGAGCGAGTTAGCGATACTGCCAAGACTGAGAGGGAGAACGGGAGAGGAGAGGAGAGCGACACTGTGGGCACTAGGTTTAGGTTCTGGCGTTTTGCTTCTGAAAAATCAAAATGAAAATCTAAGTGTGAGGGAGGGAGGTGGGGGGCAACGGGACTAA

mRNA sequence

ATGTCAGTAGTTGATGGTGTACACGGGTTGGGTTGGGTTGGGGGAATTTTTTGGACCAACCCGAAAATTCGGGTTGGTGGGGTTGCTAACCCGAATAGGGCTGATTGGCGACTGCTGTCGGATCGGAGACCGAGAGGAGAGCGAGACCGAGAGAAGAGGGAGAGGCTGACTGCGACTGGTGACGGCTTTCGGATCGGAGACCGAGAGGAGAGCGAGATCGAAAGGATAGCGAGACTAAAAGGAGATGCGAGGAGAGCAACAGCGAGAGGAAATGGAAACAACGAGGAGAGCGAGTTAGCGATACTGCCAAGACTGAGAGGGAGAACGGGAGAGGAGAGGAGAGCGACACTGTGGGCACTAGGTTTAGGTTCTGGCGTTTTGCTTCTGAAAAATCAAAATGAAAATCTAAGTGTGAGGGAGGGAGGTGGGGGGCAACGGGACTAA

Coding sequence (CDS)

ATGTCAGTAGTTGATGGTGTACACGGGTTGGGTTGGGTTGGGGGAATTTTTTGGACCAACCCGAAAATTCGGGTTGGTGGGGTTGCTAACCCGAATAGGGCTGATTGGCGACTGCTGTCGGATCGGAGACCGAGAGGAGAGCGAGACCGAGAGAAGAGGGAGAGGCTGACTGCGACTGGTGACGGCTTTCGGATCGGAGACCGAGAGGAGAGCGAGATCGAAAGGATAGCGAGACTAAAAGGAGATGCGAGGAGAGCAACAGCGAGAGGAAATGGAAACAACGAGGAGAGCGAGTTAGCGATACTGCCAAGACTGAGAGGGAGAACGGGAGAGGAGAGGAGAGCGACACTGTGGGCACTAGGTTTAGGTTCTGGCGTTTTGCTTCTGAAAAATCAAAATGAAAATCTAAGTGTGAGGGAGGGAGGTGGGGGGCAACGGGACTAA

Protein sequence

MSVVDGVHGLGWVGGIFWTNPKIRVGGVANPNRADWRLLSDRRPRGERDREKRERLTATGDGFRIGDREESEIERIARLKGDARRATARGNGNNEESELAILPRLRGRTGEERRATLWALGLGSGVLLLKNQNENLSVREGGGGQRD
Homology
The following BLAST results are available for this feature:
BLAST of ClCG08G006420 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G006420 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G006420 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG08G006420 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G006420.1ClCG08G006420.1mRNA