ClCG08G005630 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTATTAAAACCACAAGTAAAAATGCATCCTAATAATTTAGGCAGACGACAAGTAATTTGGCTTGAAACCAACTTTTGGTTTGGACAATTTGAATACCCTAAACTATGAAGAAATATAATTAAGGGAAAAGGCAGAAACAAAGAAGTTTGGAGTGGAAGAAAAATCTCATCCTTTCTATTGACATGAAAGTAGAGGAGTTGAAGTTAAATGTTGGCAACATGGCCTATGTAAAAGAAATCAACCTTTGTGGGCCAAAATGTCTTCTTTTTCCCAATCTTTATCAAGGCCTTGGTGGGGTTGGGTCAAAATTTTAGTAGCTAAGGGGCCAACTCCAACACCTACTTTGCTGCATATCTTTCTTTTACTATACTATAAATGACCAACACCAAACCCACTTCCAACCCCTCATTTTCCTCTCCCTTCGCCTTATATTTTACTCTCAACTTCTTGCCTTCCTTCCAATCAAGCATGAATGTTTACAGAGATCCAAACTTGTGTTACTTCCATCCCAAAGAAATAGTGGTGGGCGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATTTTGGCATCCAAACGAGGCCGCCACCAGTCTTCAGCCCCAAGCTGCCGGAAAACTCCCATCAACCTCTCCAACATCTTTGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCGGATGATGAAGCCTCCACCAGTCAAGAAGGTACTTCCTATTCAGCTTTAATATTATGCATTATAATATCCTTTTTCAGCTGTGTTGATATATATATATATATATATATATATATATTTCCTAGTCTCAAATCTCATAATCATGAAGAAAATTGGTGTTCCTTGGCCATTTTCAGCTGTGTGATATAAAAACTGGCAAAAAAGAAGAAAATCATTAATGGGTCTGTGGGTGCGTATCTGTTTCTGTATTCCATGAGGATGGAATATGAGCTATCCGGAGGAGGAGAATTGAAAATGAGTTAGAAATGCAAATAAAACAAGGAAAAAGAAAAACGGTGGAATGGTAAATGAGCGGTCTGGCAGAAGGGGGCAGTGTCAGAAACACAGAAAGTACAAGAATAAAAAAAGAAACAGAGTAAGTAAACGGTGGAGGAGACTGTTCATCAACAGTTGGGAAAAGTTGAAGTTTGAATTGTTCGAATTATTACAGAAAATCAGAGTTTGAGATTAGTCAGAAAGTAGACACAATTTTGGGGTTAAAACTCTGAAGCAAAGTGGTGGGGAAGGGCAAGGAAAACAAAACACAAGTTCACATCTGGACAACATTAACGACTATCAATCTTTTAACATTAGTTAATTGTATATTTGTTTGAGAGATGTTGTCTTTGGATTTATTTTTAAAATTTTAATTGTTTATTTGGGTCCACTCAAAAAAAAAATTATGTAGACTCCTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGGAGAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTCACTAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCACCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAACAAACAATGAATAGGCAAAAGAGAATATGTATGCGTGGACTGGAATTCAAATGTGATTTGTATAAAGATTTGAGTCAAATCACTACTCATTCCTCTTCTGATTTGAGGGGTTGCGGGTTAAAGAATTTATGAGTGTAAATGAACTACTGGAATGTGCTTGAATTATATATATCTTCTTATCACTTATGTAGAAGCTGGCAATTAAATAAAACAATTGAAGAAGGAACTTTCCCATTCGTGTGGACATAGTGGGAAACAATGGAGCAAGAGGGGCCCGTAGCTACACTGCTCTAATTTGGCCTATAGTTGTCTTAGTGCTTCCATAAAACAGTCTTTACATGGATATATAAATCTTTCAAACCATGATAATTGAATTAAAATAGAATTATGTTTGGAATTATATGTAGAACAAATGGAATGACTTGTTATTGTATTGTATTGTATTGTATATAAACTTAAGAGAGCAATGGTATTTTATGCCAGAAAAAATAGACTATCTATAAGGACAAACTAAATGAAAACAAGAAATGTTTTGGGTG GATTTATTAAAACCACAAGTAAAAATGCATCCTAATAATTTAGGCAGACGACAAGTAATTTGGCTTGAAACCAACTTTTGGTTTGGACAATTTGAATACCCTAAACTATGAAGAAATATAATTAAGGGAAAAGGCAGAAACAAAGAAGTTTGGAGTGGAAGAAAAATCTCATCCTTTCTATTGACATGAAAGTAGAGGAGTTGAAGTTAAATGTTGGCAACATGGCCTATGTAAAAGAAATCAACCTTTGTGGGCCAAAATGTCTTCTTTTTCCCAATCTTTATCAAGGCCTTGGTGGGGTTGGGTCAAAATTTTAGTAGCTAAGGGGCCAACTCCAACACCTACTTTGCTGCATATCTTTCTTTTACTATACTATAAATGACCAACACCAAACCCACTTCCAACCCCTCATTTTCCTCTCCCTTCGCCTTATATTTTACTCTCAACTTCTTGCCTTCCTTCCAATCAAGCATGAATGTTTACAGAGATCCAAACTTGTGTTACTTCCATCCCAAAGAAATAGTGGTGGGCGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATTTTGGCATCCAAACGAGGCCGCCACCAGTCTTCAGCCCCAAGCTGCCGGAAAACTCCCATCAACCTCTCCAACATCTTTGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCGGATGATGAAGCCTCCACCAGTCAAGAAGACTCCTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGGAGAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTCACTAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCACCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAACAAACAATGAATAGGCAAAAGAGAATATGTATGCGTGGACTGGAATTCAAATGTGATTTGTATAAAGATTTGAGTCAAATCACTACTCATTCCTCTTCTGATTTGAGGGGTTGCGGGTTAAAGAATTTATGAGTGTAAATGAACTACTGGAATGTGCTTGAATTATATATATCTTCTTATCACTTATGTAGAAGCTGGCAATTAAATAAAACAATTGAAGAAGGAACTTTCCCATTCGTGTGGACATAGTGGGAAACAATGGAGCAAGAGGGGCCCGTAGCTACACTGCTCTAATTTGGCCTATAGTTGTCTTAGTGCTTCCATAAAACAGTCTTTACATGGATATATAAATCTTTCAAACCATGATAATTGAATTAAAATAGAATTATGTTTGGAATTATATGTAGAACAAATGGAATGACTTGTTATTGTATTGTATTGTATTGTATATAAACTTAAGAGAGCAATGGTATTTTATGCCAGAAAAAATAGACTATCTATAAGGACAAACTAAATGAAAACAAGAAATGTTTTGGGTG ATGACCAACACCAAACCCACTTCCAACCCCTCATTTTCCTCTCCCTTCGCCTTATATTTTACTCTCAACTTCTTGCCTTCCTTCCAATCAAGCATGAATGTTTACAGAGATCCAAACTTGTGTTACTTCCATCCCAAAGAAATAGTGGTGGGCGTCTGCGCTTTGTGCTTAAACGAGAGGCTTCTTATTTTGGCATCCAAACGAGGCCGCCACCAGTCTTCAGCCCCAAGCTGCCGGAAAACTCCCATCAACCTCTCCAACATCTTTGCTTTTAGCTCTTTCATCAGCCGTCTCGAATTCCGGCATTGGAAGCCGGAAAACTCGGATGATGAAGCCTCCACCAGTCAAGAAGACTCCTTCATCTCAATCAACTTTGGGAAAAATGGAGTTGGGTCATGGGAGGAGAACAAGGTCTCAGAGGTGTCCCTGGAAAACTGCAGCCTGTCATGGAATCACCACTTCACTAAAGACTCCAAGGAGACCAAGACTGTGATAGAACACGGCAAGACCCGTGCCTCGCTTAGGTGGCGGAAGCGGATTGGCCACCTCTTCCAGCTCATCAGAAGGAAAAGGTCCAACAAAGGGACAGTCTGCCACGTGGAAGGAGTTAAGACAAGGAAAGGCTGGATAAGAACTCTGACAAGGTCAACAAACAATGAATAG MTNTKPTSNPSFSSPFALYFTLNFLPSFQSSMNVYRDPNLCYFHPKEIVVGVCALCLNERLLILASKRGRHQSSAPSCRKTPINLSNIFAFSSFISRLEFRHWKPENSDDEASTSQEDSFISINFGKNGVGSWEENKVSEVSLENCSLSWNHHFTKDSKETKTVIEHGKTRASLRWRKRIGHLFQLIRRKRSNKGTVCHVEGVKTRKGWIRTLTRSTNNE Homology
BLAST of ClCG08G005630 vs. NCBI nr
Match: XP_008466708.1 (PREDICTED: uncharacterized protein LOC103504055 [Cucumis melo]) HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105 Identity = 197/221 (89.14%), Postives = 203/221 (91.86%), Query Frame = 0
BLAST of ClCG08G005630 vs. NCBI nr
Match: KAG7016491.1 (hypothetical protein SDJN02_21600, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 380.6 bits (976), Expect = 9.4e-102 Identity = 191/212 (90.09%), Postives = 196/212 (92.45%), Query Frame = 0
BLAST of ClCG08G005630 vs. NCBI nr
Match: XP_038884296.1 (uncharacterized protein LOC120075175 [Benincasa hispida]) HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97 Identity = 178/189 (94.18%), Postives = 179/189 (94.71%), Query Frame = 0
BLAST of ClCG08G005630 vs. NCBI nr
Match: XP_004150445.1 (uncharacterized protein LOC101207127 [Cucumis sativus] >KGN47729.1 hypothetical protein Csa_018229 [Cucumis sativus]) HSP 1 Score: 354.4 bits (908), Expect = 7.2e-94 Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of ClCG08G005630 vs. NCBI nr
Match: XP_022993742.1 (uncharacterized protein LOC111489653 isoform X2 [Cucurbita maxima]) HSP 1 Score: 354.0 bits (907), Expect = 9.4e-94 Identity = 173/190 (91.05%), Postives = 179/190 (94.21%), Query Frame = 0
BLAST of ClCG08G005630 vs. ExPASy TrEMBL
Match: A0A1S3CRU8 (uncharacterized protein LOC103504055 OS=Cucumis melo OX=3656 GN=LOC103504055 PE=4 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.9e-106 Identity = 197/221 (89.14%), Postives = 203/221 (91.86%), Query Frame = 0
BLAST of ClCG08G005630 vs. ExPASy TrEMBL
Match: A0A0A0KFU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G390120 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94 Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0
BLAST of ClCG08G005630 vs. ExPASy TrEMBL
Match: A0A6J1JTQ0 (uncharacterized protein LOC111489653 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489653 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 4.6e-94 Identity = 173/190 (91.05%), Postives = 179/190 (94.21%), Query Frame = 0
BLAST of ClCG08G005630 vs. ExPASy TrEMBL
Match: A0A6J1FK19 (uncharacterized protein LOC111444738 OS=Cucurbita moschata OX=3662 GN=LOC111444738 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.0e-94 Identity = 174/190 (91.58%), Postives = 178/190 (93.68%), Query Frame = 0
BLAST of ClCG08G005630 vs. ExPASy TrEMBL
Match: A0A6J1CHY8 (uncharacterized protein LOC111011807 OS=Momordica charantia OX=3673 GN=LOC111011807 PE=4 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 2.3e-93 Identity = 174/190 (91.58%), Postives = 180/190 (94.74%), Query Frame = 0
BLAST of ClCG08G005630 vs. TAIR 10
Match: AT1G21830.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 155.6 bits (392), Expect = 4.6e-38 Identity = 98/208 (47.12%), Postives = 131/208 (62.98%), Query Frame = 0
BLAST of ClCG08G005630 vs. TAIR 10
Match: AT1G44608.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21830.1); Has 49 Blast hits to 49 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 9.3e-15 Identity = 59/173 (34.10%), Postives = 81/173 (46.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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