ClCG08G005500 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G005500
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUlp1-like peptidase
LocationCG_Chr08: 17367984 .. 17368764 (+)
RNA-Seq ExpressionClCG08G005500
SyntenyClCG08G005500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTGTCCTTTGGGCGGAAAAAGTTTGATCTGGTGACGGGATTGAAACACCAGACTAGACAGGTAGATAGGGATACTACCCATGTTAGACTAAGAAGAAAATATTTGAATGATGTAGAGGGGGTGAAAGGGTATGGACTAGATGCTAAGTGCCCTTCCTTGGAGTTTGAGGATGATGAAGATGTTGTCAAGATGTCCCTTTTTTATTTTATTGAGTTTGGACTCATGGGAAGGGCTAGAAAATCTAGCATGAACTTTCTATAACGTAGATTGGGGAAAATATATTTTCGATATGACAATGAGACATTTAAAGAAAGGCCTCCAAGACAAAGTTAATAACTGGCGTTTCAGGTTAGTTGTTATAGTTAGTTTCAATTATTGCTTTCCTCTTTAAATTATTACTTGTCTAACGAAATATATTTTATTTCATTTTATGTAGGTATGGGCATATGAGACCATTTCGTCCTTGACTGGACATGTTGCTAATCGGTTGAACAATGCCATACCACGCATTTGTTGTTGGTCTTGCTCACACTCACCTTCCTATGCTTTGATTAGGGATGAGGTGTTTGGTGTTGAAGAGGTATGCTCATTTCTAATGTTTTTTTTTCAATGATTATGGTATTTTTTTTACTTATAGATAATATTTGTTTATTAGGCCTTTATTACACTGGAGTTTATGGCAACAGAAGAGGAGATGGCATTCATGGATCGTGTTATGTTTCCATTGGAAGCATCGATCTTACCACCGATTCCCATGTTACCACTAGCACCATAG

mRNA sequence

ATGAAAGTGTCCTTTGGGCGGAAAAAGTTTGATCTGGTGACGGGATTGAAACACCAGACTAGACAGGTATGGGCATATGAGACCATTTCGTCCTTGACTGGACATGTTGCTAATCGGTTGAACAATGCCATACCACGCATTTGTTGTTGGTCTTGCTCACACTCACCTTCCTATGCTTTGATTAGGGATGAGGTGTTTGGTGTTGAAGAGGCCTTTATTACACTGGAGTTTATGGCAACAGAAGAGGAGATGGCATTCATGGATCGTGTTATGTTTCCATTGGAAGCATCGATCTTACCACCGATTCCCATGTTACCACTAGCACCATAG

Coding sequence (CDS)

ATGAAAGTGTCCTTTGGGCGGAAAAAGTTTGATCTGGTGACGGGATTGAAACACCAGACTAGACAGGTATGGGCATATGAGACCATTTCGTCCTTGACTGGACATGTTGCTAATCGGTTGAACAATGCCATACCACGCATTTGTTGTTGGTCTTGCTCACACTCACCTTCCTATGCTTTGATTAGGGATGAGGTGTTTGGTGTTGAAGAGGCCTTTATTACACTGGAGTTTATGGCAACAGAAGAGGAGATGGCATTCATGGATCGTGTTATGTTTCCATTGGAAGCATCGATCTTACCACCGATTCCCATGTTACCACTAGCACCATAG

Protein sequence

MKVSFGRKKFDLVTGLKHQTRQVWAYETISSLTGHVANRLNNAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMATEEEMAFMDRVMFPLEASILPPIPMLPLAP
Homology
BLAST of ClCG08G005500 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 68.9 bits (167), Expect = 3.0e-08
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLN-NAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYETIS+L+  VA RLN +AIPR+  WSC++S ++ ++  EVF   ++ + +   AT
Sbjct: 76  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 135

Query: 82  EEEMAFMDRVMFPLEASILPPIP 104
           + E   M RVM P  A + PP P
Sbjct: 136 DVERQHMARVMHPPVAPVGPPAP 158

BLAST of ClCG08G005500 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 67.4 bits (163), Expect = 8.7e-08
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLN-NAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYETIS+L+  VA RLN +AIPR+  WSC++S ++ ++  EVF   ++ + +   AT
Sbjct: 19  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 78

Query: 82  EEEMAFMDRVMFPLEASILPPIP 104
           + E   M RVM P    + PP P
Sbjct: 79  DVERQHMARVMHPPVTPVGPPAP 101

BLAST of ClCG08G005500 vs. NCBI nr
Match: XP_022156879.1 (putative F-box protein At4g17565 [Momordica charantia])

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-06
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0

Query: 20  TRQVWAYETISSLTGHVANRL-NNAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFM 79
           T +VW YETIS+L+  VA RL ++ IPR+  WSC++S  + ++  +VF    + +     
Sbjct: 370 TLKVWVYETISTLSVRVATRLSDDVIPRLLRWSCTYSRGFRVLASDVFDNTRSKVKEYLE 429

Query: 80  ATEEEMAFMDRVMFPLEASIL 100
            T+ +   MDR+M PLEA I+
Sbjct: 430 LTDAKQQHMDRIMLPLEACIV 450

BLAST of ClCG08G005500 vs. NCBI nr
Match: KGN49944.1 (hypothetical protein Csa_000148 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 9.0e-05
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLNN-AIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYE ISS+ G    RLNN A+PRI  WSCS+S    L++ +VF      I+   + +
Sbjct: 240 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 299

Query: 82  EEEMAFMD 89
           + E  F D
Sbjct: 300 DAEKQFRD 307

BLAST of ClCG08G005500 vs. NCBI nr
Match: XP_031741885.1 (uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus])

HSP 1 Score: 57.4 bits (137), Expect = 9.0e-05
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLNN-AIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYE ISS+ G    RLNN A+PRI  WSCS+S    L++ +VF      I+   + +
Sbjct: 323 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 382

Query: 82  EEEMAFMD 89
           + E  F D
Sbjct: 383 DAEKQFRD 390

BLAST of ClCG08G005500 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08
Identity = 38/83 (45.78%), Postives = 54/83 (65.06%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLN-NAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYETIS+L+  VA RLN +AIPR+  WSC++S ++ ++  EVF   ++ + +   AT
Sbjct: 76  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 135

Query: 82  EEEMAFMDRVMFPLEASILPPIP 104
           + E   M RVM P  A + PP P
Sbjct: 136 DVERQHMARVMHPPVAPVGPPAP 158

BLAST of ClCG08G005500 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.2e-08
Identity = 37/83 (44.58%), Postives = 53/83 (63.86%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLN-NAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYETIS+L+  VA RLN +AIPR+  WSC++S ++ ++  EVF   ++ + +   AT
Sbjct: 19  QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 78

Query: 82  EEEMAFMDRVMFPLEASILPPIP 104
           + E   M RVM P    + PP P
Sbjct: 79  DVERQHMARVMHPPVTPVGPPAP 101

BLAST of ClCG08G005500 vs. ExPASy TrEMBL
Match: A0A6J1DUW8 (putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.0e-06
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 0

Query: 20  TRQVWAYETISSLTGHVANRL-NNAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFM 79
           T +VW YETIS+L+  VA RL ++ IPR+  WSC++S  + ++  +VF    + +     
Sbjct: 370 TLKVWVYETISTLSVRVATRLSDDVIPRLLRWSCTYSRGFRVLASDVFDNTRSKVKEYLE 429

Query: 80  ATEEEMAFMDRVMFPLEASIL 100
            T+ +   MDR+M PLEA I+
Sbjct: 430 LTDAKQQHMDRIMLPLEACIV 450

BLAST of ClCG08G005500 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.4e-05
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLNN-AIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYE ISS+ G    RLNN A+PRI  WSCS+S    L++ +VF      I+   + +
Sbjct: 240 QVWAYEIISSIAGKAVTRLNNEAVPRILRWSCSYSLPSKLLQRDVFNSMRIVISPTLIMS 299

Query: 82  EEEMAFMD 89
           + E  F D
Sbjct: 300 DAEKQFRD 307

BLAST of ClCG08G005500 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.5e-05
Identity = 29/63 (46.03%), Postives = 44/63 (69.84%), Query Frame = 0

Query: 22  QVWAYETISSLTGHVANRLN-NAIPRICCWSCSHSPSYALIRDEVFGVEEAFITLEFMAT 81
           QVWAYETIS+L+  VA RLN +AIPR+  WSC++S ++ ++  EVF   ++ + +   AT
Sbjct: 235 QVWAYETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVFENVKSKVVVRLEAT 294

Query: 82  EEE 84
           + E
Sbjct: 295 DVE 297

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154965.13.0e-0845.78uncharacterized protein LOC111022110 [Momordica charantia][more]
XP_022136676.18.7e-0844.58uncharacterized protein LOC111008328 [Momordica charantia][more]
XP_022156879.12.1e-0639.51putative F-box protein At4g17565 [Momordica charantia][more]
KGN49944.19.0e-0544.12hypothetical protein Csa_000148 [Cucumis sativus][more]
XP_031741885.19.0e-0544.12uncharacterized protein LOC105435430 isoform X2 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DL401.5e-0845.78uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1C4634.2e-0844.58uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1DUW81.0e-0639.51putative F-box protein At4g17565 OS=Momordica charantia OX=3673 GN=LOC111023713 ... [more]
A0A0A0KM594.4e-0544.12DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A6J1DRZ77.5e-0546.03uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G005500.1ClCG08G005500.1mRNA