ClCG08G004640 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G004640
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	tetrapyrrole-binding protein, chloroplastic
Location	CG_Chr08: 14732373 .. 14733143 (+)
RNA-Seq Expression	ClCG08G004640
Synteny	ClCG08G004640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

mRNA sequence

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

Coding sequence (CDS)

ATGGCAGCTTCCCACTCTCTGCCATCTCTCCGCCACTCTCTCCGCCGTCCCCACCACCCTAACCTCTCTCCCACCTCCTTCTCCTCTTCCTCCACTCTCTTCCTCAAACCAACTTCCACCGCCGTCCCCACCACCACTGCCGCCGCCGCTTCCTCTCTCTCCGCCGCAGCCGCCGGTTCCTTCTCTCTCTCCTCCGACACCTCCTCCGCCATCTCTTTTGACGAGCTCGACCGCCTCCTCGCTGCCAAAGACTTTCGGCAGGCCGATGAAGAGACCCGGCGGCTTCTGATCGCCCTTGCCGGCGACGGCGCTCAGAAACGAGGTTACGTCTATTTCTCCGAAGTCCAATTCATCGCTTCCGACGATCTGAAAGCCATTGACGATCTCTGGCAGAAACACAGCGATGGGAAATTCGGGTACAGCGTACAGAAACGGATTTTCGAGAAAGTGAACAAAGATTTCACAAAACTGTTTATGAAACTTGGTTGGATGAAGAAGCTGGATACGGAAATGGAGCAGTACAATTACAGAGCATTTCCGACGGAGTTCATTTGGGAGCTGACGGAGGAGACGCCGGAAGGGCATCTTCCATTGACGAATGCTTTGAGAGGGACACAGTTAATGAGCAACATTCTGAGCCATCCGGCATTTGAGGAGGACGCCATTGAAGAAAAAGGGGAAGAAAAAGTTGCAGGGGAAGAAAATGGAGGATTGAAAAAGGGATTGAAATCGATTAGTGAGAGGATTTTCAAAAGGGATTACAGCTTCTGA

Protein sequence

MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLKKGLKSISERIFKRDYSF

Homology

[Close]

BLAST of ClCG08G004640 vs. NCBI nr
Match: XP_038884158.1 (tetrapyrrole-binding protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 464.5 bits (1194), Expect = 5.8e-127
Identity = 244/258 (94.57%), Postives = 252/258 (97.67%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTT--TAAAASSLSAAAA 60
           MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTA PTT  TAA ASSLSA+AA
Sbjct: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAAPTTTATAATASSLSASAA 60

Query: 61  GSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 120
           GSFSLS+DTSSAISFDELD LLAAKDFRQADEETRRLLIALAG+GAQKRGYVYFSEVQFI
Sbjct: 61  GSFSLSADTSSAISFDELDHLLAAKDFRQADEETRRLLIALAGEGAQKRGYVYFSEVQFI 120

Query: 121 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 180
           A+DDLKAID+LWQK+SDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA
Sbjct: 121 AADDLKAIDNLWQKYSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 180

Query: 181 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGL 240
           FPTEFIWELTEETPEGHLPLTNALRGTQLM NILSHPAFEEDAIEEKGEEKVAG+ENGGL
Sbjct: 181 FPTEFIWELTEETPEGHLPLTNALRGTQLMGNILSHPAFEEDAIEEKGEEKVAGDENGGL 240

Query: 241 KKGLKSISERIFKRDYSF 257
           KKGLKSI+ERIFKRDYSF
Sbjct: 241 KKGLKSITERIFKRDYSF 258

[Close]

BLAST of ClCG08G004640 vs. NCBI nr
Match: XP_008445737.1 (PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo] >KAA0033042.1 tetrapyrrole-binding protein [Cucumis melo var. makuwa] >TYK03457.1 tetrapyrrole-binding protein [Cucumis melo var. makuwa])

HSP 1 Score: 453.0 bits (1164), Expect = 1.7e-123
Identity = 239/257 (93.00%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTST-AVPTTTAAAASSLSAAAAG 60
           MAASHSLPSLR SLR PH PNLSPTSFSSSSTLFLKP ST AV TTT AA SSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFR+ADEETRRLLIALAGDGA KRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 SDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAF 180
           ++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNIL+HPAFEEDAIEEKGEEK+AG+ENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSISERIFKRDYSF 257
           KGLKSI+ER+FKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of ClCG08G004640 vs. NCBI nr
Match: XP_004140886.1 (tetrapyrrole-binding protein, chloroplastic [Cucumis sativus] >KGN46002.1 hypothetical protein Csa_004798 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.5e-119
Identity = 235/260 (90.38%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPT-STAV--PTTTAAAASSLSAAA 60
           MA SHSLPSLRHSLR PH PNLSPTSFSSSSTLFLKPT STAV   TTT AA SSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFRQADEETRRLLIALAG+GA KRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYR 180
           IA++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAG-EENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNIL+HPAF E+AIEEKGEEK+AG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSISERIFKRDYSF 257
           GLKKGLKSI+ER+FKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of ClCG08G004640 vs. NCBI nr
Match: XP_022953248.1 (tetrapyrrole-binding protein, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-111
Identity = 217/256 (84.77%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGS 60
           MAASHSLPSLRH+L RPH PNLSP  FSSSS L LK TST   T   AA SSLSAAAA S
Sbjct: 1   MAASHSLPSLRHTLSRPHRPNLSPNPFSSSS-LLLKSTSTPTATAAVAATSSLSAAAASS 60

Query: 61  FSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIAS 120
           FSLSSDTSSA+SFDEL+R LAAK+FRQADEETRRLLIALAGD AQKRGYVYFSEVQF++S
Sbjct: 61  FSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAQKRGYVYFSEVQFVSS 120

Query: 121 DDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFP 180
           D+LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTE+EQYNYRAFP
Sbjct: 121 DNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNYRAFP 180

Query: 181 TEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLKK 240
           TEFIWELTEETPEGHLPLTNALRGTQLM+NILSHPAFEEDAIE   +E VA +ENGG KK
Sbjct: 181 TEFIWELTEETPEGHLPLTNALRGTQLMTNILSHPAFEEDAIEGGAQENVAADENGGFKK 240

Query: 241 GLKSISERIFKRDYSF 257
           GLK++SERIFKRDYSF
Sbjct: 241 GLKTMSERIFKRDYSF 255

[Close]

BLAST of ClCG08G004640 vs. NCBI nr
Match: KAG6575363.1 (Tetrapyrrole-binding protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 409.1 bits (1050), Expect = 2.9e-110
Identity = 217/259 (83.78%), Postives = 235/259 (90.73%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSF---SSSSTLFLKPTSTAVPTTTAAAASSLSAAA 60
           MAASHSLPSLRH+LRRPH PNLSP  F   SSSS+L LK TST  PT   AA SSLS AA
Sbjct: 1   MAASHSLPSLRHTLRRPHRPNLSPNPFSSSSSSSSLLLKSTST--PTAAIAATSSLSTAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQF 120
           A SFSLSSDTSSA+SFDEL+R LAAK+FRQADEETRRLLIALAGD A+KRGYVYFSEVQF
Sbjct: 61  ASSFSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAKKRGYVYFSEVQF 120

Query: 121 IASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYR 180
           I+SD+LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTE+EQYNYR
Sbjct: 121 ISSDNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGG 240
           AFPTEFIWELTEETPEGHLPLTNALRGTQLM+NILSHPAFEEDAIE   +E VA +ENGG
Sbjct: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMTNILSHPAFEEDAIEGGAQENVAADENGG 240

Query: 241 LKKGLKSISERIFKRDYSF 257
            KKGL+++SERIFKRDYSF
Sbjct: 241 FKKGLETMSERIFKRDYSF 257

[Close]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot
Match: Q9LX31 (Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GUN4 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 4.7e-55
Identity = 130/260 (50.00%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 5   HSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGSFSLS 64
           HS PS  H     H  NL   S    ++L LK  ++A   +   +ASS S++     ++S
Sbjct: 12  HSSPSYTH-----HRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTTAVSAVS 71

Query: 65  SDTSSAIS------FDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 124
           +  +SA +      FD L+  L  ++FRQADEETRRLLI ++G+ A KRGYV+FSEV+ I
Sbjct: 72  TTNASATTAETATIFDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTI 131

Query: 125 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 184
           + +DL+AID+LW KHSDG+FGYSVQ++I+ KV KDFT+ F+K+ WMK LDTE+ QYNYRA
Sbjct: 132 SPEDLQAIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRA 191

Query: 185 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAF--EEDAIEEKGEEKVAGEENG 244
           FP EF WEL +ETP GHLPLTNALRGTQL+  +LSHPAF   +D   E  +E   G    
Sbjct: 192 FPDEFKWELNDETPLGHLPLTNALRGTQLLKCVLSHPAFATADDNSGETEDELNRGVAVA 251

Query: 245 GLKKGLKSISERIFKRDYSF 257
             + G+    +R+FK +YSF
Sbjct: 252 KEQAGV-GADKRVFKTNYSF 265

[Close]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot
Match: Q1XDT5 (Uncharacterized protein ycf53 OS=Pyropia yezoensis OX=2788 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.6e-25
Identity = 61/152 (40.13%), Postives = 95/152 (62.50%), Query Frame = 0


Query: 67  TSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAI 126
           ++  +++ +L  LL  +D  +AD+ T++ LI LAG  AQ R ++YF++++ I + DL+ I
Sbjct: 93  SAQQMNYKDLQMLLTHRDLLKADQLTQQKLIQLAGVNAQTRNWLYFTDIKKIPAQDLQTI 152

Query: 127 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWE 186
           D LW  HS GKFG  VQ++I+  V KD+ K + K+GW      E+++   R +P EF W 
Sbjct: 153 DKLWHTHSKGKFGLFVQRQIWLSVGKDWGKFWQKIGW------EVDRIPCR-YPEEFQW- 212

Query: 187 LTEETPEGHLPLTNALRGTQLMSNILSHPAFE 219
                P GHLPL N LRG Q++S + +H A+E
Sbjct: 213 -NSHGPRGHLPLFNQLRGVQVLSALFTHKAWE 235

[Close]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot
Match: P72583 (Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll0558 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 63/161 (39.13%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 59  GSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 118
           G F L S  +  I +  L   L ++DF  ADE TR  L  LAG GA +R ++YF+EV+  
Sbjct: 81  GIFPLQS--AQGIDYLPLQEALGSQDFETADEITRDKLCELAGPGASQRQWLYFTEVEKF 140

Query: 119 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 178
            + DL  I+ LW  HS+G FG+SVQ+R++    K+FTKL+ K+GW            +  
Sbjct: 141 PALDLHTINALWWLHSNGNFGFSVQRRLWLASGKEFTKLWPKIGW-------KSGNVWTR 200

Query: 179 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEE 220
           +P  F W+L+   P+GHLPL N LRG ++  ++  HP + +
Sbjct: 201 WPKGFTWDLS--APQGHLPLLNQLRGVRVAESLYRHPVWSQ 230

[Close]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot
Match: P51202 (Uncharacterized protein ycf53 OS=Porphyra purpurea OX=2787 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21
Identity = 56/152 (36.84%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 67  TSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAI 126
           ++  + + +L  LL   +   AD+ T++ LI LAG   + R ++YF++++ I  +DL+ I
Sbjct: 94  SNKQMDYQDLQILLVQNNLIAADKLTQQKLIKLAGVDEKSRNWLYFTDIKKIPVEDLQTI 153

Query: 127 DDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWE 186
           D LW  HS GKFG+ VQ++I+  + K++ + + K+GW      E+ +   R +P EF W 
Sbjct: 154 DQLWNAHSKGKFGFFVQRQIWLALEKNWEQFWYKIGW------EINRVPCR-YPEEFHWN 213

Query: 187 LTEETPEGHLPLTNALRGTQLMSNILSHPAFE 219
            T   P+GHLPL N LRG Q++S + SH A++
Sbjct: 214 ST--GPKGHLPLCNQLRGVQVLSALFSHKAWD 236

[Close]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot
Match: O19887 (Uncharacterized protein ycf53 OS=Cyanidium caldarium OX=2771 GN=ycf53 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.6e-21
Identity = 49/142 (34.51%), Postives = 89/142 (62.68%), Query Frame = 0


Query: 73  FDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIASDDLKAIDDLWQK 132
           ++ L+ LL+A +F +A++ T+++L+ LAG+ +++R ++YF++V  I    +  ++ LW+ 
Sbjct: 102 YETLESLLSANNFFEANKFTQQILLELAGEQSKQRNWMYFTDVHSINHQSVSDLNHLWEL 161

Query: 133 HSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFPTEFIWELTEETP 192
           +S G FG+S+QKRI+  VNK++ K + K+GW+           +  +P EF+W +    P
Sbjct: 162 YSQGNFGFSIQKRIWISVNKNWKKFWKKIGWIN------SNSKWLKYPGEFMWAV--NAP 221

Query: 193 EGHLPLTNALRGTQLMSNILSH 215
            GHLPL N LRG  ++  I  +
Sbjct: 222 PGHLPLFNQLRGVYVLEFIFDY 235

[Close]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL
Match: A0A5A7SPC7 (Tetrapyrrole-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00620 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.4e-124
Identity = 239/257 (93.00%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTST-AVPTTTAAAASSLSAAAAG 60
           MAASHSLPSLR SLR PH PNLSPTSFSSSSTLFLKP ST AV TTT AA SSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFR+ADEETRRLLIALAGDGA KRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 SDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAF 180
           ++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNIL+HPAFEEDAIEEKGEEK+AG+ENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSISERIFKRDYSF 257
           KGLKSI+ER+FKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL
Match: A0A1S3BE43 (tetrapyrrole-binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488673 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 8.4e-124
Identity = 239/257 (93.00%), Postives = 248/257 (96.50%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTST-AVPTTTAAAASSLSAAAAG 60
           MAASHSLPSLR SLR PH PNLSPTSFSSSSTLFLKP ST AV TTT AA SSLSAAAAG
Sbjct: 1   MAASHSLPSLRPSLRHPHRPNLSPTSFSSSSTLFLKPASTAAVTTTTTAATSSLSAAAAG 60

Query: 61  SFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIA 120
           SFSLSSDTSSAISFDELDRLLAAKDFR+ADEETRRLLIALAGDGA KRGYVYFSEVQFIA
Sbjct: 61  SFSLSSDTSSAISFDELDRLLAAKDFRKADEETRRLLIALAGDGALKRGYVYFSEVQFIA 120

Query: 121 SDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAF 180
           ++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYRAF
Sbjct: 121 AEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYRAF 180

Query: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLK 240
           PTEFIWELTEETPEGHLPLTNALRGTQLMSNIL+HPAFEEDAIEEKGEEK+AG+ENGGLK
Sbjct: 181 PTEFIWELTEETPEGHLPLTNALRGTQLMSNILNHPAFEEDAIEEKGEEKIAGDENGGLK 240

Query: 241 KGLKSISERIFKRDYSF 257
           KGLKSI+ER+FKRDYSF
Sbjct: 241 KGLKSITERLFKRDYSF 257

[Close]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL
Match: A0A0A0KCD2 (GUN4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042370 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.7e-119
Identity = 235/260 (90.38%), Postives = 246/260 (94.62%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPT-STAV--PTTTAAAASSLSAAA 60
           MA SHSLPSLRHSLR PH PNLSPTSFSSSSTLFLKPT STAV   TTT AA SSLSAAA
Sbjct: 1   MATSHSLPSLRHSLRHPHRPNLSPTSFSSSSTLFLKPTSSTAVTTTTTTTAATSSLSAAA 60

Query: 61  AGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQF 120
           AGSFSLSSDTSSAISFDELDRLL AKDFRQADEETRRLLIALAG+GA KRGYVYFSEVQF
Sbjct: 61  AGSFSLSSDTSSAISFDELDRLLGAKDFRQADEETRRLLIALAGEGALKRGYVYFSEVQF 120

Query: 121 IASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYR 180
           IA++DLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTE+EQYNYR
Sbjct: 121 IAAEDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEIEQYNYR 180

Query: 181 AFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAG-EENG 240
           AFPTEFIWELTE+TPEGHLPLTNALRGT+LMSNIL+HPAF E+AIEEKGEEK+AG  ENG
Sbjct: 181 AFPTEFIWELTEDTPEGHLPLTNALRGTRLMSNILNHPAFGEEAIEEKGEEKIAGVVENG 240

Query: 241 GLKKGLKSISERIFKRDYSF 257
           GLKKGLKSI+ER+FKRDYSF
Sbjct: 241 GLKKGLKSITERLFKRDYSF 260

[Close]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL
Match: A0A6J1GMW2 (tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455853 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.6e-112
Identity = 217/256 (84.77%), Postives = 233/256 (91.02%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGS 60
           MAASHSLPSLRH+L RPH PNLSP  FSSSS L LK TST   T   AA SSLSAAAA S
Sbjct: 1   MAASHSLPSLRHTLSRPHRPNLSPNPFSSSS-LLLKSTSTPTATAAVAATSSLSAAAASS 60

Query: 61  FSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFIAS 120
           FSLSSDTSSA+SFDEL+R LAAK+FRQADEETRRLLIALAGD AQKRGYVYFSEVQF++S
Sbjct: 61  FSLSSDTSSAVSFDELERHLAAKNFRQADEETRRLLIALAGDAAQKRGYVYFSEVQFVSS 120

Query: 121 DDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRAFP 180
           D+LKAIDDLWQK+SDGKFGYSVQKR+FEKVN+DFTKLFMKLGWMKKLDTE+EQYNYRAFP
Sbjct: 121 DNLKAIDDLWQKYSDGKFGYSVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYNYRAFP 180

Query: 181 TEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEENGGLKK 240
           TEFIWELTEETPEGHLPLTNALRGTQLM+NILSHPAFEEDAIE   +E VA +ENGG KK
Sbjct: 181 TEFIWELTEETPEGHLPLTNALRGTQLMTNILSHPAFEEDAIEGGAQENVAADENGGFKK 240

Query: 241 GLKSISERIFKRDYSF 257
           GLK++SERIFKRDYSF
Sbjct: 241 GLKTMSERIFKRDYSF 255

[Close]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL
Match: A0A6J1JPI7 (tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488677 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.1e-110
Identity = 218/261 (83.52%), Postives = 237/261 (90.80%), Query Frame = 0


Query: 1   MAASHSLPSLRHSLRRPHHPNLSPTSF---SSSSTLFLKPTSTAVPTTTA--AAASSLSA 60
           MAASHSLPSLRH+LRRPH PNLSP  F   SSSS+L L+ TST   T TA  AA SSLSA
Sbjct: 1   MAASHSLPSLRHTLRRPHRPNLSPNPFSSSSSSSSLLLQSTSTPTATATAAIAATSSLSA 60

Query: 61  AAAGSFSLSSDTSSAISFDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEV 120
           AAA SFSLSSDTSSA+SFDEL+R LAAK+FRQAD+ETRRLLIALAGD AQKRGYVYFSEV
Sbjct: 61  AAASSFSLSSDTSSAVSFDELERHLAAKNFRQADKETRRLLIALAGDAAQKRGYVYFSEV 120

Query: 121 QFIASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYN 180
           QFI+SD+LKAIDDLWQK+SDGKFGY VQKR+FEKVN+DFTKLFMKLGWMKKLDTE+EQYN
Sbjct: 121 QFISSDNLKAIDDLWQKYSDGKFGYRVQKRVFEKVNRDFTKLFMKLGWMKKLDTEIEQYN 180

Query: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAFEEDAIEEKGEEKVAGEEN 240
           YRAFPTEFIWELTEETPEGHLPLTNALRGTQLM+NILS+PAFEEDAIE   +E VAG+EN
Sbjct: 181 YRAFPTEFIWELTEETPEGHLPLTNALRGTQLMTNILSNPAFEEDAIEGGAQENVAGDEN 240

Query: 241 GGLKKGLKSISERIFKRDYSF 257
           GG KKGLK++SERIFKRDYSF
Sbjct: 241 GGFKKGLKTMSERIFKRDYSF 261

[Close]

BLAST of ClCG08G004640 vs. TAIR 10
Match: AT3G59400.1 (enzyme binding;tetrapyrrole binding )

HSP 1 Score: 216.1 bits (549), Expect = 3.3e-56
Identity = 130/260 (50.00%), Postives = 173/260 (66.54%), Query Frame = 0


Query: 5   HSLPSLRHSLRRPHHPNLSPTSFSSSSTLFLKPTSTAVPTTTAAAASSLSAAAAGSFSLS 64
           HS PS  H     H  NL   S    ++L LK  ++A   +   +ASS S++     ++S
Sbjct: 12  HSSPSYTH-----HRNNLHCQSHFGPTSLSLKQPTSAATFSLICSASSTSSSTTAVSAVS 71

Query: 65  SDTSSAIS------FDELDRLLAAKDFRQADEETRRLLIALAGDGAQKRGYVYFSEVQFI 124
           +  +SA +      FD L+  L  ++FRQADEETRRLLI ++G+ A KRGYV+FSEV+ I
Sbjct: 72  TTNASATTAETATIFDVLENHLVNQNFRQADEETRRLLIQISGEAAVKRGYVFFSEVKTI 131

Query: 125 ASDDLKAIDDLWQKHSDGKFGYSVQKRIFEKVNKDFTKLFMKLGWMKKLDTEMEQYNYRA 184
           + +DL+AID+LW KHSDG+FGYSVQ++I+ KV KDFT+ F+K+ WMK LDTE+ QYNYRA
Sbjct: 132 SPEDLQAIDNLWIKHSDGRFGYSVQRKIWLKVKKDFTRFFVKVEWMKLLDTEVVQYNYRA 191

Query: 185 FPTEFIWELTEETPEGHLPLTNALRGTQLMSNILSHPAF--EEDAIEEKGEEKVAGEENG 244
           FP EF WEL +ETP GHLPLTNALRGTQL+  +LSHPAF   +D   E  +E   G    
Sbjct: 192 FPDEFKWELNDETPLGHLPLTNALRGTQLLKCVLSHPAFATADDNSGETEDELNRGVAVA 251

Query: 245 GLKKGLKSISERIFKRDYSF 257
             + G+    +R+FK +YSF
Sbjct: 252 KEQAGV-GADKRVFKTNYSF 265

The following BLAST results are available for this feature:

BLAST of ClCG08G004640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884158.1	5.8e-127	94.57	tetrapyrrole-binding protein, chloroplastic [Benincasa hispida]	[more]
XP_008445737.1	1.7e-123	93.00	PREDICTED: tetrapyrrole-binding protein, chloroplastic [Cucumis melo] >KAA003304...	[more]
XP_004140886.1	7.5e-119	90.38	tetrapyrrole-binding protein, chloroplastic [Cucumis sativus] >KGN46002.1 hypoth...	[more]
XP_022953248.1	2.0e-111	84.77	tetrapyrrole-binding protein, chloroplastic-like [Cucurbita moschata]	[more]
KAG6575363.1	2.9e-110	83.78	Tetrapyrrole-binding protein, chloroplastic, partial [Cucurbita argyrosperma sub...	[more]

BLAST of ClCG08G004640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX31	4.7e-55	50.00	Tetrapyrrole-binding protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=G...	[more]
Q1XDT5	8.6e-25	40.13	Uncharacterized protein ycf53 OS=Pyropia yezoensis OX=2788 GN=ycf53 PE=3 SV=1	[more]
P72583	1.6e-23	39.13	Ycf53-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P51202	1.2e-21	36.84	Uncharacterized protein ycf53 OS=Porphyra purpurea OX=2787 GN=ycf53 PE=3 SV=1	[more]
O19887	2.6e-21	34.51	Uncharacterized protein ycf53 OS=Cyanidium caldarium OX=2771 GN=ycf53 PE=3 SV=1	[more]

BLAST of ClCG08G004640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPC7	8.4e-124	93.00	Tetrapyrrole-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BE43	8.4e-124	93.00	tetrapyrrole-binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A0A0KCD2	3.7e-119	90.38	GUN4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G042370 PE=4 S...	[more]
A0A6J1GMW2	9.6e-112	84.77	tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JPI7	3.1e-110	83.52	tetrapyrrole-binding protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of ClCG08G004640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G59400.1	3.3e-56	50.00	enzyme binding;tetrapyrrole binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.25.40.620		coord: 19..134 e-value: 7.9E-20 score: 73.8
None	No IPR available	GENE3D	1.10.10.1770		coord: 135..222 e-value: 3.2E-20 score: 74.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
IPR008629	GUN4-like	PFAM	PF05419	GUN4	coord: 68..214 e-value: 1.9E-44 score: 151.2
IPR008629	GUN4-like	PANTHER	PTHR34800	TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC	coord: 4..256
IPR008629	GUN4-like	CDD	cd16383	GUN4	coord: 71..213 e-value: 5.8163E-39 score: 130.743
IPR037215	GUN4-like superfamily	SUPERFAMILY	140869	GUN4-like	coord: 69..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G004640.1	ClCG08G004640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010019	chloroplast-nucleus signaling pathway
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046906	tetrapyrrole binding