ClCG08G004460 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G004460
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CG_Chr08: 13969911 .. 13973962 (+)
RNA-Seq Expression	ClCG08G004460
Synteny	ClCG08G004460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCAAAATATATTGTGTTTTATAAAAACTTTGAAAAGGCACCCGAGACTCAGGGACTTGGAGAAGGCCTAAGGGTAGCCTTAATATAGGAAAAGGTACCCAATGCTGAGGGGCTCGTAGAAGGCAAATGGGTAACCTGGATATGGAAATGGGACCCTAATGCTCAGGGATTTGGAGAAGGCATTGTGGGCGGCTTGGATTATAATACCTATGTGCACATAGAGGAATATACGACGCTGATGTGTTGAGATTACTCCACACAGCTAGGGAAAATAGACGTTGAGAAGCGTAAAGCATTGCTCCGCCTCAACTAGGGAAAAATGATTTTGAAATGAATGAGATTTTTGAGGATTTACTCTAAAACAGATATGCATGAGTTAACAATGGTTTTTGAGCATATTATAATATGATTTGAATTGTTATATTTTATGGGAATTTGAAATGTTCATATTATGACCAGTGTTACAGTTAAAGTAGATGTTTTCAAAAACTGTTGCTCACTGAGCTGTTAGCTCTTTCTTTTATATGTTTTCCATTTTTCAGGTAGCATGACAGTTCCCGTTGAGGAGCGAAGTCGAGGTTTGTCAAGAGTTAATGGTATTACTGTCATAGGAAGGGTAGATATGAAAAGTGAGGTAAATGTGATAGTGGGATTTGAGACAGGGAAGTCGATGACTACTGTCCTCACACTCCGTCTCGGGCTATGGGAGGATAGTTCGGGGTGGGGTGTGACATCTAGTACTACCAAATCTGGAGTATGACATATGGTTAGGAGCGGATCAACTCTTAGTGTAAGCACTGACTTGTGTTATCAAGTGTTGGGGTGCGGCAATGTGGTTGTGGCTATGCGTTGCAAGGAGGAGTAGTCGTGAGTGAGAGCAAAGAATTTTTGGAAAGTAAAATTTTGGCTAAGTGTTGGCCAAGCCCATGCGTTGTTAATTGACTCACGGAGGGTTGTGAGCTGAAGTAGCGGCCCGTGTCGAAGGATAAGTAATTTTGGCGGGGAAGAAATGTGCTTGAACCATGCGTTTAAGTCACTCTGCATTGAGGACAGTCATGCGCTGAAGTCGATGCGTTGAAGACAGACATGCGTTGAAGTCGCACCGCGTCGAAGACAGAGTGGTCTTGACGCGACGAAAATAGTGGTGTATGACGGGGATGTATGCGTCAAAAATAGGAGGCGTTGAGGATGACACTATGCGTTGGGTATGGTTAGTTGTTGAAGGCATTGGAGGAGAAGTTTAACATTAGCGCCTCGCATCGAGGTGAGAATCCTGCGCTAGCCTGCGGGTGAGGGGTAAGTCCGCAACATAAATCTTAGTGTTTGTGAAGGCTAAGTCGGTAGTATATATAGTTGGATTAATTAAATGTTTAATCATTTTAAAGACATTTTCGAGAGCTTAAGTCGGTTCCATATTTCAGACAAACTTCAGGAGAAGATTGAGGAAGGTGTTCTTGTGGATTTTGGGCGAAATTCTACTCGTATTGGTGTTGAAAACGGAGCTGGAATAGAAGATTGATTGCAGTCGCACAGACTGAACAGTGGTTGATATTTGGAGTAGAACGTATAGAGGAAGCCGAGTTTAGAGCTGAAATTTGGAGGTCAGTAAGTTAACATAATTCCTAACAAATTTTGTGAAGGATGGTAAAGCCGAAATTGAAGTTAATCATGTGAATCTTTAGGGAAAAACAGCATTTACAAGATTGTTAAGCAATCTGGAGTAGCATGAAGTGATTTTAAAATAACTAGAGAACGAAGAAGAGTTAAGCCTTGAAATTTTGAGGTAAGCTATAAAACTCAATTCTCTATAAGTTTGTAGAAGGGAAGAAGTTCTAAATCCATCTGAAATCATGACTTTTAATAGATTGAAGTAAGAACAAGAGGAAAGGAAGAATCACAGTGCAGGGTGCCGCTAAAACCAAGTATCGGTGCGCTGTCTAAGTACTGGTAGCGAGACGAGTGTCGCTGAAACGCAAAGGAGTTTTCCGTCTCACAAAACTCACTAGATATCGCTGGGTGTCGCTACTAAGGTAAGGTAACGTTGGTGTCGCTCAATCTAGTATCGCTAGTAACAGACTCGGTTGGGTAGTATTGCTAGAATTCTCGCTTATGATGTTAGTTTGGAAAAGGGGGAGGTTCAATGTTAAGTAACGCAAGATAAAATGTTTATTGCAGGCTAGGAAGAGATAGGGAAGGCATATAACCCACGCAAGGCCTAGGAAGAGTTGTGAGTGACTCCTTTGTTCTTCAATTCGATTTTGATTAAAAATGTTCTTATGGAATATGATTTTGCAATGAACTGTTTAAAATGCATAATGTTTGATTGCATTATTTACAAGGCATGTTATATGTTTTCTAAAGTTGATAGAAAGCATTTTCTCTTATAAAATGTTATTGAATAAAGATCTGTATGATTTTCTATGAAAGGATTTCTATATGAACTATTTATGTGAACGGGTTCTAAAATGTTTTAGAGGAGGCTCAGTGCTCAAGGACATGAGAAGGCACGTGAGTTTCCCCGGGACCCAGTATTGAAGGACATGGAGAAGGTACTTAGGCAACCCGTCATATTCCTATATGCACATAGAGGGTGATTTGGCTGGTGCGTCGAGTTTGCTCCGCATTGAGCCAAGGATGATTTCGATGTTGGGTGTGTTGAGCCTTGCTCCACCCCCAACTAAGGTTGTTTTCGACGTTGAGTGCGTTAAAACGTTGCTCCGCCTCAACTAAGGGAAAAGTTTTGAAAAACCAAATTGTTACTATTTCACTTCCTTGGTAAACATTCATATATGATTTGAAGTTAGACTTATGAGATTGATGGATTTGTGGAAAGTATTCTTTAATTGAATAATATGTTAAATCCTTACTTATTTGTTATATGTAACATGCTTGTTTTCAATAAATGTTCGTTTTACAAAAATTGGTCACTCACTGGGCTGTTAGCTTATGTTTTGTTCAATGTTTTCTTTTTCTCTCCCCAGGTAGTGAGGACATTCCCGGTGCTTAGCCTACTTCAGCTCTCCCTGCCTAAGTCTCGAGTTCTCAAAATTCAGTCAAGTCTGAGAGTTGCACGTTGTATATAACTTTATGTAGATGGCATGTAGACCTAGTAGTTTCGAGTGAGGATCGTAGTGGGGTTTTGTACAATGTATGATGGATATGGAAGTTTAAATTATGTTATATGAAAAAAGTGTACTCTGTACAGGAAATAATGTTATGTTATAAGCATGTGTAGTATGATCGAGTTCTATGAATGTATATGAGTAAATGTGTGCACAGGAAGATGAGTAAGATGAGACAATATGCGTCACAAGAGGGGTGATGTTTATTGTCTTCACATTCCCTTTCAGGTTAGGTAGGTAGTCTGGGAGGGGGTGTGACACTTAGTCGGTTGGCTGTATAATTCCATGACGCTCGAAGTAGCAGCTCAAGTCATGGGCTTTGATGAAGCAAAGCTTTTATGGGATGCCATTCAAGAATATTTTGGCATTCAATCAAGGTCCCAAGAAGACTACTATCGATAAATGATGCAACAAATCAGGAAAGAAAGTATGAAGATGGAAGACTATCTGGTAGCCATGAAGAAATATTATGATAATCTCTTGCTGGTAGGATCTCTTATGATCTCCTATGGATTTCAGGAGTTCCATCTCACATATTTTCGCGGGACTTGATGAGGAGTATAATCCTATTGTCTGTGTTATTCGTAGTCAAGATCTTACTTGGAACAAAATTCAATATGTACTCTTATCCTATGAACAAAGACATGAGAAACTTTAAGAGGTTAAAGGAAACATGTCATTGAACCAGTTGTTTGTCAACTATGCTGCAACAGATAAGAAGGGAAATTTTAATCCATTATCCAACCGATGGGGATACAACAACAACAACAATTCAAATAAAGGTGGAGGCGGAAACAGAAATAGAGGAAGAAATCGTTATTCTCCTTACCCTCAATCAAATAAACCAACATGCCAAATATGCAGAAAGTATGGACATGCTACTGATGTCTGTTATCAGAGTTATAACAAAGAAGATGATAACTGA

mRNA sequence

ATGTTTCCAAAATATATTGTGTTTTATAAAAACTTTGAAAAGGCACCCGAGACTCAGGGACTTGGAGAAGGCCTAAGGGGGCTCGTAGAAGGCAAATGGGTAACCTGGATATGGAAATGGGACCCTAATGCTCAGGGATTTGGAGAAGGCATTGTGGGCGGCTTGGATTATAATACCTATGTGCACATAGAGGAATATACGACGCTGATGTGTAGCATGACAGTTCCCGTTGAGGAGCGAAGTCGAGGTTTGTCAAGAGTTAATGGTATTACTGTCATAGGAAGGGTAGATATGAAAAGTGAGGTAAATGTGATAGTGGGATTTGAGACAGGGAAGTCGATGACTACTGTCCTCACACTCCGTCTCGGGCTATGGGAGGATAGTTCGGGGTGGGGTGTGACATCTAGTACTACCAAATCTGGATGTTGGGGTGCGGCAATGTGGTTGTGGCTATGCGTTGCAAGGAGGAGTAGTCGTGAACAGACATGCGTTGAAGTCGCACCGCGTCGAAGACAGAGTGGTCTTGACGCGACGAAAATAGTGGTGTATGACGGGGATTTGTTGAAGGCATTGGAGGAGAAGTTTAACATTAGCGCCTCGCATCGAGGTGAGAATCCTGCGCTAGCCTGCGGTCGGTTCCATATTTCAGACAAACTTCAGGAGAAGATTGAGGAAGGTGTTCTTGTGGATTTTGGGCGAAATTCTACTCTCGCACAGACTGAACAGTGGTTGATATTTGGAGTAGAACGTATAGAGGAAGCCGAGTTTAGAGCTGAAATTTGGAGGTCAATTGAAGTAAGAACAAGAGGAAAGGAAGAATCACAGTGCAGGGTGCCGCTAAAACCAAGTATCGGTAAGGTAACGTTGGTGTCGCTCAATCTAGTATCGCTAGTAACAGACTCGAGGAGGCTCAGTGCTCAAGGACATGAGAAGGCACGTGAGTTTCCCCGGGACCCAGTATTGAAGGACATGGAGAAGGGTGATTTGGCTGGTGCGTCGAGTTTGCTCCGCATTGAGCCAAGGATGATTTCGATGTTGGGTGTGTTGAGCCTTGCTCCACCCCCAACTAAGGTAGTGAGGACATTCCCGGTGCTTAGCCTACTTCAGCTCTCCCTGCCTAAGTCTCGAGTTCTCAAAATTCAGTCAAGTCTGAGAGTTGCACGTTTCGGTTGGCTGTATAATTCCATGACGCTCGAAGTAGCAGCTCAAGTCATGGGCTTTGATGAAGCAAAGCTTTTATGGGATGCCATTCAAGAATATTTTGGCATTCAATCAAGGAGTTCCATCTCACATATTTTCGCGGGACTTGATGAGGAGTATAATCCTATTGTCTGTGTTATTCAGGTTAAAGGAAACATGTCATTGAACCAGTTGTTTGTCAACTATGCTGCAACAGATAAGAAGGGAAATTTTAATCCATTATCCAACCGATGGGGATACAACAACAACAACAATTCAAATAAAGGTGGAGGCGGAAACAGAAATAGAGGAAGAAATCGTTATTCTCCTTACCCTCAATCAAATAAACCAACATGCCAAATATGCAGAAAGTATGGACATGCTACTGATGTCTGTTATCAGAGTTATAACAAAGAAGATGATAACTGA

Coding sequence (CDS)

ATGTTTCCAAAATATATTGTGTTTTATAAAAACTTTGAAAAGGCACCCGAGACTCAGGGACTTGGAGAAGGCCTAAGGGGGCTCGTAGAAGGCAAATGGGTAACCTGGATATGGAAATGGGACCCTAATGCTCAGGGATTTGGAGAAGGCATTGTGGGCGGCTTGGATTATAATACCTATGTGCACATAGAGGAATATACGACGCTGATGTGTAGCATGACAGTTCCCGTTGAGGAGCGAAGTCGAGGTTTGTCAAGAGTTAATGGTATTACTGTCATAGGAAGGGTAGATATGAAAAGTGAGGTAAATGTGATAGTGGGATTTGAGACAGGGAAGTCGATGACTACTGTCCTCACACTCCGTCTCGGGCTATGGGAGGATAGTTCGGGGTGGGGTGTGACATCTAGTACTACCAAATCTGGATGTTGGGGTGCGGCAATGTGGTTGTGGCTATGCGTTGCAAGGAGGAGTAGTCGTGAACAGACATGCGTTGAAGTCGCACCGCGTCGAAGACAGAGTGGTCTTGACGCGACGAAAATAGTGGTGTATGACGGGGATTTGTTGAAGGCATTGGAGGAGAAGTTTAACATTAGCGCCTCGCATCGAGGTGAGAATCCTGCGCTAGCCTGCGGTCGGTTCCATATTTCAGACAAACTTCAGGAGAAGATTGAGGAAGGTGTTCTTGTGGATTTTGGGCGAAATTCTACTCTCGCACAGACTGAACAGTGGTTGATATTTGGAGTAGAACGTATAGAGGAAGCCGAGTTTAGAGCTGAAATTTGGAGGTCAATTGAAGTAAGAACAAGAGGAAAGGAAGAATCACAGTGCAGGGTGCCGCTAAAACCAAGTATCGGTAAGGTAACGTTGGTGTCGCTCAATCTAGTATCGCTAGTAACAGACTCGAGGAGGCTCAGTGCTCAAGGACATGAGAAGGCACGTGAGTTTCCCCGGGACCCAGTATTGAAGGACATGGAGAAGGGTGATTTGGCTGGTGCGTCGAGTTTGCTCCGCATTGAGCCAAGGATGATTTCGATGTTGGGTGTGTTGAGCCTTGCTCCACCCCCAACTAAGGTAGTGAGGACATTCCCGGTGCTTAGCCTACTTCAGCTCTCCCTGCCTAAGTCTCGAGTTCTCAAAATTCAGTCAAGTCTGAGAGTTGCACGTTTCGGTTGGCTGTATAATTCCATGACGCTCGAAGTAGCAGCTCAAGTCATGGGCTTTGATGAAGCAAAGCTTTTATGGGATGCCATTCAAGAATATTTTGGCATTCAATCAAGGAGTTCCATCTCACATATTTTCGCGGGACTTGATGAGGAGTATAATCCTATTGTCTGTGTTATTCAGGTTAAAGGAAACATGTCATTGAACCAGTTGTTTGTCAACTATGCTGCAACAGATAAGAAGGGAAATTTTAATCCATTATCCAACCGATGGGGATACAACAACAACAACAATTCAAATAAAGGTGGAGGCGGAAACAGAAATAGAGGAAGAAATCGTTATTCTCCTTACCCTCAATCAAATAAACCAACATGCCAAATATGCAGAAAGTATGGACATGCTACTGATGTCTGTTATCAGAGTTATAACAAAGAAGATGATAACTGA

Protein sequence

MFPKYIVFYKNFEKAPETQGLGEGLRGLVEGKWVTWIWKWDPNAQGFGEGIVGGLDYNTYVHIEEYTTLMCSMTVPVEERSRGLSRVNGITVIGRVDMKSEVNVIVGFETGKSMTTVLTLRLGLWEDSSGWGVTSSTTKSGCWGAAMWLWLCVARRSSREQTCVEVAPRRRQSGLDATKIVVYDGDLLKALEEKFNISASHRGENPALACGRFHISDKLQEKIEEGVLVDFGRNSTLAQTEQWLIFGVERIEEAEFRAEIWRSIEVRTRGKEESQCRVPLKPSIGKVTLVSLNLVSLVTDSRRLSAQGHEKAREFPRDPVLKDMEKGDLAGASSLLRIEPRMISMLGVLSLAPPPTKVVRTFPVLSLLQLSLPKSRVLKIQSSLRVARFGWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSSISHIFAGLDEEYNPIVCVIQVKGNMSLNQLFVNYAATDKKGNFNPLSNRWGYNNNNNSNKGGGGNRNRGRNRYSPYPQSNKPTCQICRKYGHATDVCYQSYNKEDDN

Homology

[Close]

BLAST of ClCG08G004460 vs. NCBI nr
Match: XP_038875135.1 (uncharacterized protein LOC120067668 [Benincasa hispida])

HSP 1 Score: 96.3 bits (238), Expect = 8.6e-16
Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSSISHIFAGLDEEYNPIVCVIQV 449
           GWLYNSM  EVA Q+MGF+ AK LWDAI   FG+QSR+       G  +  + I      
Sbjct: 80  GWLYNSMAPEVAVQLMGFENAKSLWDAIHSLFGVQSRAEEVTSDGGSGQSKSSI------ 139

Query: 450 KGNMSLNQLFVNYAATDKKGNFNPLSNRWGYNNNNNSNKGGGGNRNRGRNRYSPYPQSNK 509
                       + A+     F  ++++  Y+NN      G G R +GR R       N 
Sbjct: 140 ------------HGASQGSVKFQQINSKPNYSNN------GSGTRGKGRGR------GNC 192

Query: 510 PTCQICRKYGHATDVCYQSYNKE 533
           PTCQ+C KYGH+TDVCYQ +N+E
Sbjct: 200 PTCQVCSKYGHSTDVCYQRFNRE 192

[Close]

BLAST of ClCG08G004460 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-13
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS-------ISHIFAGLDEEYNP 449
           GWLYNSMT +VA Q+MGF   + LWDA Q++FG+QSR+        +     GLDE YN 
Sbjct: 117 GWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNL 176

Query: 450 IVCVIQVKGNMS---------LNQLFVNYAATDKKGNFN-------PLSNRWGYNNNNNS 509
           ++ VIQ K ++S         + +  + +  T KK   N        ++ R+  N   N 
Sbjct: 177 VIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQ 236

Query: 510 NKGGGGNRNRGRNRYSPYPQSNKPTCQICRKYGHATDVCYQSYNKE 533
           +       NR          +N PTCQ+C KYGH+  VCY  +NKE
Sbjct: 237 SNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKE 282

[Close]

BLAST of ClCG08G004460 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-13
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS-------ISHIFAGLDEEYNP 449
           GWLYNSMT +VA Q+MGF   + LWDA Q++FG+QSR+        +     GLDE YN 
Sbjct: 117 GWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNL 176

Query: 450 IVCVIQVKGNMS---------LNQLFVNYAATDKKGNFN-------PLSNRWGYNNNNNS 509
           ++ VIQ K ++S         + +  + +  T KK   N        ++ R+  N   N 
Sbjct: 177 VIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQ 236

Query: 510 NKGGGGNRNRGRNRYSPYPQSNKPTCQICRKYGHATDVCYQSYNKE 533
           +       NR          +N PTCQ+C KYGH+  VCY  +NKE
Sbjct: 237 SNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKE 282

[Close]

BLAST of ClCG08G004460 vs. NCBI nr
Match: XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])

HSP 1 Score: 84.7 bits (208), Expect = 2.6e-12
Identity = 70/220 (31.82%), Postives = 95/220 (43.18%), Query Frame = 0


Query: 347 GVLSLAPPP--TKVVRTFPVLSLLQLSLPKSRVLKIQSSLRVARFGWLYNSMTLEVAAQV 406
           G+ SL P    T    + PVL +      +SR +  Q  L     GWLYN MT EVA QV
Sbjct: 107 GIASLTPQQGITTASNSSPVLQVNPFY--ESRTVVDQLLL-----GWLYNFMTAEVAMQV 166

Query: 407 MGFDEAKLLWDAIQEYFGIQSRSS------------------------------------ 466
           MG++  K LW AIQE FG+QSR+                                     
Sbjct: 167 MGYENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKTHSDNLGLTG 226

Query: 467 --------ISHIFAGLDEEYNPIVCVIQVKGNMSLNQLFVNYAATDKKGNFNPLSNRWGY 521
                   +S +  GLDEE+NP V  IQ +  +S   +     A +K+            
Sbjct: 227 SPVPTRALVSQVLLGLDEEFNPFVATIQGRSEISWTNMQTELLAFEKR------------ 286

[Close]

BLAST of ClCG08G004460 vs. NCBI nr
Match: TYK05754.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 80.5 bits (197), Expect = 4.9e-11
Identity = 63/203 (31.03%), Postives = 82/203 (40.39%), Query Frame = 0


Query: 400 VAAQVMGFDEAKLLWDAIQEYFGIQSRSS------------------------------- 459
           +A Q+MGF  AK LW+A Q+ FG+QSR+                                
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 460 -------------ISHIFAGLDEEYNPIVCVIQVKGNMS--------------------- 519
                        IS    GLDE YNP++ VIQ K  +S                     
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 520 -----LNQLFVNYAATDKKGNFNPLSNRWGYNNNNNSNKGGGGNRNRGRNRYSPYPQSNK 533
                + Q  VN A      +F   SN   + NN N+++G  G  N GR R     + NK
Sbjct: 165 KNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGK--GRGNK 224

[Close]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-13
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS-------ISHIFAGLDEEYNP 449
           GWLYNSMT +VA Q+MGF   + LWDA Q++FG+QSR+        +     GLDE YN 
Sbjct: 117 GWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNL 176

Query: 450 IVCVIQVKGNMS---------LNQLFVNYAATDKKGNFN-------PLSNRWGYNNNNNS 509
           ++ VIQ K ++S         + +  + +  T KK   N        ++ R+  N   N 
Sbjct: 177 VIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQ 236

Query: 510 NKGGGGNRNRGRNRYSPYPQSNKPTCQICRKYGHATDVCYQSYNKE 533
           +       NR          +N PTCQ+C KYGH+  VCY  +NKE
Sbjct: 237 SNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKE 282

[Close]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.5e-13
Identity = 60/166 (36.14%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS-------ISHIFAGLDEEYNP 449
           GWLYNSMT +VA Q+MGF   + LWDA Q++FG+QSR+        +     GLDE YN 
Sbjct: 117 GWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNL 176

Query: 450 IVCVIQVKGNMS---------LNQLFVNYAATDKKGNFN-------PLSNRWGYNNNNNS 509
           ++ VIQ K ++S         + +  + +  T KK   N        ++ R+  N   N 
Sbjct: 177 VIVVIQGKPDISWLDMQSKLLIFEKRLKHQNTQKKNTGNITQSPALNMAQRFALNGQRNQ 236

Query: 510 NKGGGGNRNRGRNRYSPYPQSNKPTCQICRKYGHATDVCYQSYNKE 533
           +       NR          +N PTCQ+C KYGH+  VCY  +NKE
Sbjct: 237 SNKKFYGYNRQHFSGQRGNLNNGPTCQLCGKYGHSALVCYNRFNKE 282

[Close]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL
Match: A0A5D3C373 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002430 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-11
Identity = 63/203 (31.03%), Postives = 82/203 (40.39%), Query Frame = 0


Query: 400 VAAQVMGFDEAKLLWDAIQEYFGIQSRSS------------------------------- 459
           +A Q+MGF  AK LW+A Q+ FG+QSR+                                
Sbjct: 45  IAIQLMGFTNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKVRASYEDYLRIMKTNSDK 104

Query: 460 -------------ISHIFAGLDEEYNPIVCVIQVKGNMS--------------------- 519
                        IS    GLDE YNP++ VIQ K  +S                     
Sbjct: 105 LGQAGSPVPKRAFISQALLGLDEVYNPVIAVIQGKPEISWIDMQSELLTFEKRLEHQDTQ 164

Query: 520 -----LNQLFVNYAATDKKGNFNPLSNRWGYNNNNNSNKGGGGNRNRGRNRYSPYPQSNK 533
                + Q  VN A      +F   SN   + NN N+++G  G  N GR R     + NK
Sbjct: 165 KNTENIIQNVVNIAQNRNSSDFRKYSNHQFHGNNRNNSQGQRGGFNIGRGRGK--GRGNK 224

[Close]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL
Match: A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.3e-11
Identity = 65/207 (31.40%), Postives = 92/207 (44.44%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS--------------------- 449
           GWLYNSMT +VA Q+MGF   + LWDA Q++FG+QSR+                      
Sbjct: 117 GWLYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEY 176

Query: 450 -----------------------ISHIFAGLDEEYNPIVCVIQVKGNMS---------LN 509
                                  IS +  GLDE YN ++ VIQ K ++S         + 
Sbjct: 177 LLVMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGKPDISWLDMQSKLLIF 236

Query: 510 QLFVNYAATD----KKGNFNP-----LSNRWGYN--NNNNSNKGGGGNRNRGRNRYSPYP 533
           +  + +  T     KKGN        ++ R+  N   N+++ K  G NR     +     
Sbjct: 237 EKILKHQNTQKKKKKKGNITQSPALNMAQRFALNGQRNHSNKKFYGYNRQHFSGQRGNL- 296

[Close]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL
Match: A0A803PM38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.9e-10
Identity = 60/210 (28.57%), Postives = 89/210 (42.38%), Query Frame = 0


Query: 390 GWLYNSMTLEVAAQVMGFDEAKLLWDAIQEYFGIQSRSS--------------------- 449
           GWLY SMT  +A +VMG D +  LW A++E FG  S++                      
Sbjct: 119 GWLYGSMTEGIACEVMGCDSSASLWTALEELFGAHSKAKMDEYRTKIQTARKGALSMADY 178

Query: 450 -----------------------ISHIFAGLDEEYNPIVCVIQVKGNMSLNQLF------ 509
                                  +S++ +GLD EY P+V +I+ +G+ +  QL       
Sbjct: 179 LRQKRQWADVLALAGEPYPENQLVSNVLSGLDIEYLPMVLLIEARGSTTWQQLQDMLLSL 238

Query: 510 --------------------VNYAATDKKGNFNPLSNRWGYNNNN---NSNKGGGGNRNR 527
                               +N +A+      +P +NR  +NNNN   +SN  G  NR+R
Sbjct: 239 DSKMERLHSFSGSSKLTGVPMNPSASLANKGPHPGANRGNHNNNNRGGHSNNRGSNNRSR 298

The following BLAST results are available for this feature:

BLAST of ClCG08G004460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875135.1	8.6e-16	39.86	uncharacterized protein LOC120067668 [Benincasa hispida]	[more]
XP_016902203.1	3.1e-13	36.14	PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]	[more]
XP_016902197.1	3.1e-13	36.14	PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]	[more]
XP_038902487.1	2.6e-12	31.82	uncharacterized protein LOC120089143 [Benincasa hispida]	[more]
TYK05754.1	4.9e-11	31.03	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of ClCG08G004460 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG08G004460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E1U6	1.5e-13	36.14	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1V2	1.5e-13	36.14	uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C373	2.4e-11	31.03	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SIT7	5.3e-11	31.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A803PM38	9.9e-10	28.57	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of ClCG08G004460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 474..505

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G004460.1	ClCG08G004460.1	mRNA