ClCG08G003280 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G003280
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Myb transcription factor
Location	CG_Chr08: 8379948 .. 8382197 (-)
RNA-Seq Expression	ClCG08G003280
Synteny	ClCG08G003280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACGTTTGACAATTTTCTTTTCTTTTTTTTGTCGTTTTTTTTCTCTCCTTTGTATTGAAAAAGAAAAACAAATGCGTTGTTAATATAACTCTTACTTATTTCATGTTTTTAAAGATTTTAATTTTTCTTAAAAAAAATTGTTAAGTATTCGAGAATTTGAATCTTTAATCTTAAAGAAAAGAAGTACGTATCCATTGTTGTTGAATTATATTCCTGTCGACTTAAAATTAGTTTTAAGTAAGAAATAATTGCTTGAAGACCAAAAATGTTCAAAAGTATTATGCTATATTTAGTTTTTGGAATCATACATCTTTGTACGTACAACAATAGCGGGTGAGTCTACTCCCACATAGTTGAGTGGATATTGGATACAACAACTCCTCTATGTCATTTTAATTTTTTTTTTTTTTTCAAAAGAAAAAAGAAGAAGAAGAATGGAATTTATCGTGCATTCTTATAGATTAGTAATGAATAAAAGTATATTGAATTTATTAATACTCATCTAACAACGAAAATATTAAACAAACATAGAGAGAATTTTAGGCCCCGTATGGTAACTATTTGATTTTGATCNTACGTACAACAATAGCGGGTGAGTCTACTCCCACATAGTTGAGTGGATATTGGATACAACAACTCCTCTATGTCATTTTAATTAATTTTTTTTTTCAAAAGAAAAAAGAAGAAGAAGAATGGAATTTATCGTGCATTCTTATAGATTAGTAATGAATAAAAGTATATTGAATTTATTAATACTCATCTAACAACGAAAATATTAAACAAACATAGAGAGAATTTTAGGCCCCGTATGGTAACTATTTGATTTTGATTAATAGTTTTTAAAAATTAAGCCTATAAACACTCCAATTCTAAATTGTTTACTTGATGATCTAGTTCATACTAATGTTTACATTAACTAAGCCAAAGTTTTGAAAACCATAAAAGTAATTTTTTAATAATTTATTTTTGCTTTTAGAATTTGGCTTAGAATACAACTCTTTTTTATTTAAGATTAGATAATAATAATAAAAAAAAAAAAAAACACTATATAGTAAGTAATGGAGAAGAAATAGACTTCATTTTAAAAATAAAAAACAAAAAGTCAAATAGTTACCAAAATTAAGATCTAAATTTATCAAGACACACTCAGTTATTTAATTGGAGAAAAAGAGAAGACACACACAAAACTTTGCGAAAATATAGGCTTTGATCACTTCTCTTTGGTGATAATTAAAGCTCTTTATTAATTATGATGCTTCTTCTATAGCTTTGAATTAACTTGTTACATGTTTCTCGCAATTATTCTCTAAAAAGAAAGAATTTTAGTAGATCATCATTTTAAAATTAATACATTAATCACAAAGACTCAAGAAACACTTAGATTAAAAACCAAAAGTAATTATAGCACAGGAAACCGAAACTTTATTAAAACCCGACGTTAATCAAATATGTTTTATTTTATTCTTTTTAAATTTCATGAATTAGTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

mRNA sequence

ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACTATTCGAGAATTTGAATCTTTAATCTTAAAGAAAAGAATTTTTGGAATCATACATCTTTGTACGTACAACAATAGCGGTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

Coding sequence (CDS)

ATGCCAAACCTCGACGATATGGACGGTTTTGCAGGGGACGAAACGAAGTCATTTCCTCGGGGACATTGGCGTCCGGCCGAGGATGAGAAGCTTCGACGGTTAGTTCAACAACATGGTGCACAAAACTGGAATTTCATTGCGGAGAAACTACAAGGAAGATCAGGCATGTCTCTTTTTGTAATAACTATTCGAGAATTTGAATCTTTAATCTTAAAGAAAAGAATTTTTGGAATCATACATCTTTGTACGTACAACAATAGCGGTTGCATTAATAATTTTGATGATGCAGGGAAGAGTTGTAGATTAAGATGGTTCAATCAACTAGATCCAAGAATAAACAGAAGACCATTCAGTGAAGAAGAAGAAGAAAGGCTTTTAGAAGCTCATGAAATTCATGGCAACAAATGGGCATTAATAGCAAGGCTTTTTCCTGGAAGAACTGATAATGCTGTAAAGAATCATTGGCATGTAATTATGGCAAGAAAACAAAGACAACAATCCAATAATCTCTCTACAACCAACAAAATTAGAAACAATTATCAACAATTTTTCTTCCATTCCAAATTAATCTCTCCCCCAGCGAAATCCGCAATCGCAAGAGCAAGAGCAAGATCGCACCGTGACGGAGGAATGTTCGGTACATTATGGTGGCCGGGACTTCAAACCCCTAACCACCGCTCTGATTATAACTTTAATTTGCTCTTTAGATGTTATCAAAAATCGTTGCATTCGGGGAATTTTAGACCAAATAATCAATCGAAATCGTCAATTAAGTCTGAGATTTTGAATGAACCGGTTGAGAGGAAGGATGTTAAGTTCATAGATTTCCTTGGAGTTGAGCAGTGA

Protein sequence

MPNLDDMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHRDGGMFGTLWWPGLQTPNHRSDYNFNLLFRCYQKSLHSGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVEQ

Homology

[Close]

BLAST of ClCG08G003280 vs. NCBI nr
Match: KAE8651846.1 (hypothetical protein Csa_006140 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 2.6e-88
Identity = 180/278 (64.75%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 7   MDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREF 66
           M G AGD+ KS PRGHWRPAEDEKLR+LVQQHG QNWNF+AEKLQGRS            
Sbjct: 1   MAGVAGDDVKSCPRGHWRPAEDEKLRQLVQQHGPQNWNFVAEKLQGRS------------ 60

Query: 67  ESLILKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLL 126
                                         GKSCRLRWFNQLDPRINRRPF+EEEEERLL
Sbjct: 61  ------------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLL 120

Query: 127 EAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS--NNLSTTNKIRNNYQQFF 186
           EAH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS  NNLST  KI N+YQQF 
Sbjct: 121 EAHGIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFV 180

Query: 187 FHSKLISPPAKSAIARARARSHRDGGMFGTLWWPGLQTPNHRSDYNFNLLFR-CYQKSLH 246
            HSKLIS P           SH  GG+FG  W P L+ PN+R DYN NL  R CYQ S  
Sbjct: 181 LHSKLISHP--------HGDSHGRGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFR 228

Query: 247 SGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVEQ 282
           S +FRPN +SKS+IK EILNE VERKD KFIDFLGVEQ
Sbjct: 241 SESFRPNIRSKSTIKFEILNESVERKDAKFIDFLGVEQ 228

[Close]

BLAST of ClCG08G003280 vs. NCBI nr
Match: XP_022936691.1 (transcription factor MYB117-like [Cucurbita moschata])

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-67
Identity = 157/277 (56.68%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 11  AGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLI 70
           +GD+TKS PRGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                
Sbjct: 11  SGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS---------------- 70

Query: 71  LKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHE 130
                                     GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH 
Sbjct: 71  --------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHR 130

Query: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLI 190
           IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ +FF  SK  
Sbjct: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFPEFFIGSK-- 190

Query: 191 SPPAKSAIARARARSHR-DGGMFGTLWWPGLQTPNHRSDYNF------NLLFRCYQKSLH 250
           S  A SAIAR R       GG+F   W    Q PN++ + +F      +L  R YQ SL 
Sbjct: 191 SSLAASAIARTRTHGGGCGGGLFRRFW--ERQNPNNQWNNSFFPHFPSSLFLRWYQSSLD 235

Query: 251 SGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVE 281
             NF+ N     SI  EI NE VE+KD+KFIDFLGVE
Sbjct: 251 LRNFKENR--SKSINFEISNELVEKKDIKFIDFLGVE 235

[Close]

BLAST of ClCG08G003280 vs. NCBI nr
Match: XP_023535350.1 (transcription factor MYB105-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.0 bits (676), Expect = 7.4e-67
Identity = 157/277 (56.68%), Postives = 176/277 (63.54%), Query Frame = 0


Query: 11  AGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLI 70
           +GD+TKS  RGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                
Sbjct: 11  SGDDTKSCSRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS---------------- 70

Query: 71  LKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHE 130
                                     GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH 
Sbjct: 71  --------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHR 130

Query: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLI 190
           IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ +FF  SK  
Sbjct: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFPEFFIGSK-- 190

Query: 191 SPPAKSAIARARARSHR-DGGMFGTLWWPGLQTPNHR------SDYNFNLLFRCYQKSLH 250
           S P  SAIAR R       GG+F   W    Q PN++        +  +L  R YQ SL 
Sbjct: 191 SSPTASAIARTRTHGGGCGGGLFRRFW--EHQNPNNQWNNSLFPHFPSSLFLRWYQSSLD 235

Query: 251 SGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVE 281
             NF+ +N+SK SI  EI NE VE+KD+KFIDFLGVE
Sbjct: 251 LRNFK-DNRSK-SINFEISNESVEKKDIKFIDFLGVE 235

[Close]

BLAST of ClCG08G003280 vs. NCBI nr
Match: KAG6592163.1 (Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-66
Identity = 157/277 (56.68%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 11  AGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLI 70
           +GD+TKS PRGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                
Sbjct: 11  SGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS---------------- 70

Query: 71  LKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHE 130
                                     GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH 
Sbjct: 71  --------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHR 130

Query: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLI 190
           IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ +FF  SK  
Sbjct: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFPEFFIGSK-- 190

Query: 191 SPPAKSAIARARARSHR-DGGMFGTLWWPGLQTPNHRSDYNF------NLLFRCYQKSLH 250
           S    S IAR R       GG+F   W    Q PN++ + +F      +L  R YQ SL 
Sbjct: 191 SSLTASTIARTRMHGGGCGGGLFRRFW--ERQNPNNQWNNSFFPHFPSSLFLRWYQSSLD 235

Query: 251 SGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVE 281
             NF+  NQSK SI  EI  E VE+KD+KFIDFLGVE
Sbjct: 251 LRNFK-ENQSK-SINFEISKESVEKKDIKFIDFLGVE 235

[Close]

BLAST of ClCG08G003280 vs. NCBI nr
Match: XP_022975017.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 3.4e-64
Identity = 154/279 (55.20%), Postives = 176/279 (63.08%), Query Frame = 0


Query: 12  GDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLIL 71
           GD+TKS PRGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                 
Sbjct: 12  GDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS----------------- 71

Query: 72  KKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEI 131
                                    GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH I
Sbjct: 72  -------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHRI 131

Query: 132 HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLIS 191
           HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ + F  SK  S
Sbjct: 132 HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFHELFIGSK--S 191

Query: 192 PPAKSAIARARARSHRDG-GMFGTLW--WPGLQTPNHR------SDYNFNLLFRCYQKSL 251
            P   AIAR R      G G  G L+  +   Q PN++        ++ ++  R Y+ SL
Sbjct: 192 SPTAPAIARTRTHGGGGGCGCGGGLFRRFSERQNPNNQWNNSLFPHFSSSVFLRWYKSSL 240

Query: 252 HSGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVEQ 282
              N + +N+SK SI  EI NE VE+KDVKFIDFLGVE+
Sbjct: 252 DLRNCK-DNRSK-SINFEISNESVEKKDVKFIDFLGVER 240

[Close]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.6e-43
Identity = 110/275 (40.00%), Postives = 140/275 (50.91%), Query Frame = 0


Query: 17  SFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIF 76
           S  RGHWRPAED KL+ LV  +G QNWN IAEKLQGRS                      
Sbjct: 104 SVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRS---------------------- 163

Query: 77  GIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKW 136
                               GKSCRLRWFNQLDPRINRR F+EEEEERL++AH ++GNKW
Sbjct: 164 --------------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKW 223

Query: 137 ALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRN-----NYQQFFFHSKLIS 196
           A+IARLFPGRTDN+VKNHWHVIMARK R+QS++      + +     N     F+     
Sbjct: 224 AMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSLKPLINPNPHIFND---F 283

Query: 197 PPAKSAIARARARSHRDGGMFGTLWWPGLQTPNHRSDYNFNLLFRCYQKSLHSGNFRPNN 256
            P + A+    +  H+       L  P    P +  +    L+   ++  +  G++    
Sbjct: 284 DPTRLALTHLASSDHKQ------LMLPVPCFPGYDHENESPLMVDMFETQMMVGDYIAWT 327

Query: 257 QSKSSI-------KSEILNEPVERKDVKFIDFLGV 280
           Q  ++        KSEI     E K   F DFLG+
Sbjct: 344 QEATTFDFLNQTGKSEIFERINEEKKPPFFDFLGL 327

[Close]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.9e-42
Identity = 89/156 (57.05%), Postives = 98/156 (62.82%), Query Frame = 0


Query: 12  GDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLIL 71
           G + K   RGHWRPAED KL+ LV Q+G QNWN IAEKL GRS                 
Sbjct: 41  GVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRS----------------- 100

Query: 72  KKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEI 131
                                    GKSCRLRWFNQLDPRINRR F+EEEEERL+ AH  
Sbjct: 101 -------------------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMAAHRA 154

Query: 132 HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS 168
           +GNKWALIARLFPGRTDNAVKNHWHV+MAR+ R+QS
Sbjct: 161 YGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQS 154

[Close]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 8.5e-42
Identity = 87/160 (54.37%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAED KL+ LV  +G QNWN IAEKLQGRS                         
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRS------------------------- 157

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINRR F+EEEEERL++AH ++GNKWA+I
Sbjct: 158 -----------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMI 215

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNN 180
           ARLFPGRTDN+VKNHWHV+MARK R+ S+       + NN
Sbjct: 218 ARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNN 215

[Close]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-41
Identity = 87/148 (58.78%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAEDEKL+ LV+Q+G  NWN IA KL GRS                         
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRS------------------------- 65

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINR PF+EEEEERLL AH IHGN+W++I
Sbjct: 66  -----------------GKSCRLRWFNQLDPRINRNPFTEEEEERLLAAHRIHGNRWSII 111

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQS 168
           ARLFPGRTDNAVKNHWHVIMAR+ RQ S
Sbjct: 126 ARLFPGRTDNAVKNHWHVIMARRTRQTS 111

[Close]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41
Identity = 85/148 (57.43%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAEDEKLR LV+Q G  NWN IA+KL GRS                         
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRS------------------------- 64

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINR PF+EEEEERLL +H IHGN+W++I
Sbjct: 65  -----------------GKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWSVI 110

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQS 168
           AR FPGRTDNAVKNHWHVIMAR+ R++S
Sbjct: 125 ARFFPGRTDNAVKNHWHVIMARRGRERS 110

[Close]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL
Match: A0A0A0LKW9 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G229940 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 6.3e-72
Identity = 145/195 (74.36%), Postives = 153/195 (78.46%), Query Frame = 0


Query: 90  INNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALIARLFPGRTDN 149
           IN FDD GKSCRLRWFNQLDPRINRRPF+EEEEERLLEAH IHGNKWALIARLFPGRTDN
Sbjct: 53  INYFDDVGKSCRLRWFNQLDPRINRRPFTEEEEERLLEAHGIHGNKWALIARLFPGRTDN 112

Query: 150 AVKNHWHVIMARKQRQQS--NNLSTTNKIRNNYQQFFFHSKLISPPAKSAIARARARSHR 209
           AVKNHWHVIMARKQRQQS  NNLST  KI N+YQQF  HSKLIS P           SH 
Sbjct: 113 AVKNHWHVIMARKQRQQSNNNNLSTRKKITNSYQQFVLHSKLISHP--------HGDSHG 172

Query: 210 DGGMFGTLWWPGLQTPNHRSDYNFNLLFR-CYQKSLHSGNFRPNNQSKSSIKSEILNEPV 269
            GG+FG  W P L+ PN+R DYN NL  R CYQ S  S +FRPN +SKS+IK EILNE V
Sbjct: 173 RGGLFGRFWQPKLRNPNNRWDYNLNLFLRSCYQNSFRSESFRPNIRSKSTIKFEILNESV 232

Query: 270 ERKDVKFIDFLGVEQ 282
           ERKD KFIDFLGVEQ
Sbjct: 233 ERKDAKFIDFLGVEQ 239

[Close]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL
Match: A0A6J1F870 (transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.5e-68
Identity = 157/277 (56.68%), Postives = 175/277 (63.18%), Query Frame = 0


Query: 11  AGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLI 70
           +GD+TKS PRGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                
Sbjct: 11  SGDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS---------------- 70

Query: 71  LKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHE 130
                                     GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH 
Sbjct: 71  --------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHR 130

Query: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLI 190
           IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ +FF  SK  
Sbjct: 131 IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFPEFFIGSK-- 190

Query: 191 SPPAKSAIARARARSHR-DGGMFGTLWWPGLQTPNHRSDYNF------NLLFRCYQKSLH 250
           S  A SAIAR R       GG+F   W    Q PN++ + +F      +L  R YQ SL 
Sbjct: 191 SSLAASAIARTRTHGGGCGGGLFRRFW--ERQNPNNQWNNSFFPHFPSSLFLRWYQSSLD 235

Query: 251 SGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVE 281
             NF+ N     SI  EI NE VE+KD+KFIDFLGVE
Sbjct: 251 LRNFKENR--SKSINFEISNELVEKKDIKFIDFLGVE 235

[Close]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL
Match: A0A6J1IBV4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.7e-64
Identity = 154/279 (55.20%), Postives = 176/279 (63.08%), Query Frame = 0


Query: 12  GDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLIL 71
           GD+TKS PRGHWRP EDEKLRRLV+Q+GAQNWNFIAEKLQGRS                 
Sbjct: 12  GDDTKSCPRGHWRPTEDEKLRRLVKQYGAQNWNFIAEKLQGRS----------------- 71

Query: 72  KKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEI 131
                                    GKSCRLRWFNQLDPRINRRPF+EEEEERLL AH I
Sbjct: 72  -------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLTAHRI 131

Query: 132 HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFFHSKLIS 191
           HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSN  +T    + N+ + F  SK  S
Sbjct: 132 HGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNFSAT----KLNFHELFIGSK--S 191

Query: 192 PPAKSAIARARARSHRDG-GMFGTLW--WPGLQTPNHR------SDYNFNLLFRCYQKSL 251
            P   AIAR R      G G  G L+  +   Q PN++        ++ ++  R Y+ SL
Sbjct: 192 SPTAPAIARTRTHGGGGGCGCGGGLFRRFSERQNPNNQWNNSLFPHFSSSVFLRWYKSSL 240

Query: 252 HSGNFRPNNQSKSSIKSEILNEPVERKDVKFIDFLGVEQ 282
              N + +N+SK SI  EI NE VE+KDVKFIDFLGVE+
Sbjct: 252 DLRNCK-DNRSK-SINFEISNESVEKKDVKFIDFLGVER 240

[Close]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL
Match: A0A7J6EAC7 (Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_028280 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.2e-50
Identity = 117/212 (55.19%), Postives = 130/212 (61.32%), Query Frame = 0


Query: 9   GFAG-DETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFE 68
           G AG D+ K+ PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKL GRS             
Sbjct: 12  GAAGHDDAKTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLHGRS------------- 71

Query: 69  SLILKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLE 128
                                        GKSCRLRWFNQLDPRINRRPF+EEEEERLL 
Sbjct: 72  -----------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERLLA 131

Query: 129 AHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQ----QF 188
           AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQS   S T+   ++Y+     F
Sbjct: 132 AHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSKTSSLTHNHHHHYRLQSSSF 181

Query: 189 FFHSKLISPPAKSAIARARARSHRD--GGMFG 214
            F     + P  + I   +   HRD  G  FG
Sbjct: 192 NFSFSTPNTPNNNNIPFNQITDHRDLRGYYFG 181

[Close]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL
Match: A0A072V0T7 (Myb transcription factor OS=Medicago truncatula OX=3880 GN=25489757 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 6.7e-50
Identity = 110/199 (55.28%), Postives = 126/199 (63.32%), Query Frame = 0


Query: 6   DMDGFAGDETKSFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIRE 65
           D    A ++TKS PRGHWRPAEDEKLR+LV+Q+GAQNWN IAEKLQGRS           
Sbjct: 2   DDSSSAAEDTKSCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRS----------- 61

Query: 66  FESLILKKRIFGIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERL 125
                                          GKSCRLRWFNQLDPRINRRPF+EEEEERL
Sbjct: 62  -------------------------------GKSCRLRWFNQLDPRINRRPFTEEEEERL 121

Query: 126 LEAHEIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNNYQQFFF 185
           L AH IHGNKWALIARLFPGRTDNAVKNHWHVIMARKQR+QS         + ++Q+ F 
Sbjct: 122 LAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCG-----KRSFQEVFS 153

Query: 186 HSKLISPPAKSAIARARAR 205
           +S +++ P  + I     R
Sbjct: 182 NSSILNFPYTTRIGYENGR 153

[Close]

BLAST of ClCG08G003280 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-44
Identity = 110/275 (40.00%), Postives = 140/275 (50.91%), Query Frame = 0


Query: 17  SFPRGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIF 76
           S  RGHWRPAED KL+ LV  +G QNWN IAEKLQGRS                      
Sbjct: 104 SVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRS---------------------- 163

Query: 77  GIIHLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKW 136
                               GKSCRLRWFNQLDPRINRR F+EEEEERL++AH ++GNKW
Sbjct: 164 --------------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKW 223

Query: 137 ALIARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRN-----NYQQFFFHSKLIS 196
           A+IARLFPGRTDN+VKNHWHVIMARK R+QS++      + +     N     F+     
Sbjct: 224 AMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRKTMVSLKPLINPNPHIFND---F 283

Query: 197 PPAKSAIARARARSHRDGGMFGTLWWPGLQTPNHRSDYNFNLLFRCYQKSLHSGNFRPNN 256
            P + A+    +  H+       L  P    P +  +    L+   ++  +  G++    
Sbjct: 284 DPTRLALTHLASSDHKQ------LMLPVPCFPGYDHENESPLMVDMFETQMMVGDYIAWT 327

Query: 257 QSKSSI-------KSEILNEPVERKDVKFIDFLGV 280
           Q  ++        KSEI     E K   F DFLG+
Sbjct: 344 QEATTFDFLNQTGKSEIFERINEEKKPPFFDFLGL 327

[Close]

BLAST of ClCG08G003280 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 172.2 bits (435), Expect = 6.0e-43
Identity = 87/160 (54.37%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAED KL+ LV  +G QNWN IAEKLQGRS                         
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRS------------------------- 157

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINRR F+EEEEERL++AH ++GNKWA+I
Sbjct: 158 -----------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMI 215

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNN 180
           ARLFPGRTDN+VKNHWHV+MARK R+ S+       + NN
Sbjct: 218 ARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNN 215

[Close]

BLAST of ClCG08G003280 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 172.2 bits (435), Expect = 6.0e-43
Identity = 87/160 (54.37%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAED KL+ LV  +G QNWN IAEKLQGRS                         
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRS------------------------- 157

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINRR F+EEEEERL++AH ++GNKWA+I
Sbjct: 158 -----------------GKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWAMI 215

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQSNNLSTTNKIRNN 180
           ARLFPGRTDN+VKNHWHV+MARK R+ S+       + NN
Sbjct: 218 ARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKLMSNN 215

[Close]

BLAST of ClCG08G003280 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 171.8 bits (434), Expect = 7.9e-43
Identity = 87/148 (58.78%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAEDEKL+ LV+Q+G  NWN IA KL GRS                         
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRS------------------------- 65

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINR PF+EEEEERLL AH IHGN+W++I
Sbjct: 66  -----------------GKSCRLRWFNQLDPRINRNPFTEEEEERLLAAHRIHGNRWSII 111

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQS 168
           ARLFPGRTDNAVKNHWHVIMAR+ RQ S
Sbjct: 126 ARLFPGRTDNAVKNHWHVIMARRTRQTS 111

[Close]

BLAST of ClCG08G003280 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-42
Identity = 85/148 (57.43%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 20  RGHWRPAEDEKLRRLVQQHGAQNWNFIAEKLQGRSGMSLFVITIREFESLILKKRIFGII 79
           RGHWRPAEDEKLR LV+Q G  NWN IA+KL GRS                         
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRS------------------------- 64

Query: 80  HLCTYNNSGCINNFDDAGKSCRLRWFNQLDPRINRRPFSEEEEERLLEAHEIHGNKWALI 139
                            GKSCRLRWFNQLDPRINR PF+EEEEERLL +H IHGN+W++I
Sbjct: 65  -----------------GKSCRLRWFNQLDPRINRNPFTEEEEERLLASHRIHGNRWSVI 110

Query: 140 ARLFPGRTDNAVKNHWHVIMARKQRQQS 168
           AR FPGRTDNAVKNHWHVIMAR+ R++S
Sbjct: 125 ARFFPGRTDNAVKNHWHVIMARRGRERS 110

The following BLAST results are available for this feature:

BLAST of ClCG08G003280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8651846.1	2.6e-88	64.75	hypothetical protein Csa_006140 [Cucumis sativus]	[more]
XP_022936691.1	1.1e-67	56.68	transcription factor MYB117-like [Cucurbita moschata]	[more]
XP_023535350.1	7.4e-67	56.68	transcription factor MYB105-like [Cucurbita pepo subsp. pepo]	[more]
KAG6592163.1	1.6e-66	56.68	Transcription factor CSA, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022975017.1	3.4e-64	55.20	transcription factor CSA-like [Cucurbita maxima]	[more]

BLAST of ClCG08G003280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEZ4	2.6e-43	40.00	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q5NBM8	2.9e-42	57.05	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9LQX5	8.5e-42	54.38	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9FX36	1.1e-41	58.78	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R0C4	1.9e-41	57.43	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]

BLAST of ClCG08G003280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKW9	6.3e-72	74.36	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G22994...	[more]
A0A6J1F870	5.5e-68	56.68	transcription factor MYB117-like OS=Cucurbita moschata OX=3662 GN=LOC111443207 P...	[more]
A0A6J1IBV4	1.7e-64	55.20	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111473941 PE=4 S...	[more]
A0A7J6EAC7	5.2e-50	55.19	Uncharacterized protein (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_028280 PE...	[more]
A0A072V0T7	6.7e-50	55.28	Myb transcription factor OS=Medicago truncatula OX=3880 GN=25489757 PE=4 SV=1	[more]

BLAST of ClCG08G003280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69560.1	1.9e-44	40.00	myb domain protein 105	[more]
AT1G26780.1	6.0e-43	54.38	myb domain protein 117	[more]
AT1G26780.2	6.0e-43	54.38	myb domain protein 117	[more]
AT1G73410.1	7.9e-43	58.78	myb domain protein 54	[more]
AT1G17950.1	1.3e-42	57.43	myb domain protein 52	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 19..68 e-value: 7.6E-4 score: 28.8 coord: 113..161 e-value: 1.4E-16 score: 71.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 15..55 score: 7.642366
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 109..159 score: 9.88356
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 128..156 e-value: 1.39264E-6 score: 42.5626
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 23..58 e-value: 2.15315E-8 score: 47.5702
None	No IPR available	GENE3D	1.10.10.60		coord: 115..184 e-value: 1.5E-19 score: 71.8
None	No IPR available	GENE3D	1.10.10.60		coord: 20..113 e-value: 6.9E-21 score: 75.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR45614:SF176	OS08G0435700 PROTEIN	coord: 96..175 coord: 11..57
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 96..175 coord: 11..57
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 114..157 e-value: 1.0E-16 score: 60.9 coord: 20..55 e-value: 7.4E-9 score: 35.7
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 15..70 score: 13.983343
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 109..163 score: 28.162169
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 97..167
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 17..58

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G003280.2	ClCG08G003280.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding