ClCG08G002950 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGGCGGTCAGGGAACGCTAGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGGTCAGACAAACTAAGATCAAAGTTGGGGACTTCTAATTTTCCTTTAGGTTTTGGATTATTTCTTATTTATTTTTCTTTTTTCAGACAAACTAAGATGGGCACTGTCGAGCCCATCACTCTTTTGCAAAGAGAGGGCAAGTAGTGAGAACAAGGTTAATGTCAGAGTGATTGATGAATTCCAGATAATTTTGATTTGA ATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGGCGGTCAGGGAACGCTAGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGACAAACTAAGATGGGCACTGTCGAGCCCATCACTCTTTTGCAAAGAGAGGGCAAGTAGTGAGAACAAGGTTAATGTCAGAGTGATTGATGAATTCCAGATAATTTTGATTTGA ATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGGCGGTCAGGGAACGCTAGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGACAAACTAAGATGGGCACTGTCGAGCCCATCACTCTTTTGCAAAGAGAGGGCAAGTAGTGAGAACAAGGTTAATGTCAGAGTGATTGATGAATTCCAGATAATTTTGATTTGA MESSSSSLQKSNNENVKARRPRRSGNASAGGQINRLSRSARRTGGSKTNRGPPPKMSTGGGDKLRWALSSPSLFCKERASSENKVNVRVIDEFQIILI Homology
BLAST of ClCG08G002950 vs. NCBI nr
Match: XP_022930152.1 (proline-rich protein 36-like [Cucurbita moschata]) HSP 1 Score: 64.3 bits (155), Expect = 6.6e-07 Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of ClCG08G002950 vs. NCBI nr
Match: KAE8646590.1 (hypothetical protein Csa_005634, partial [Cucumis sativus]) HSP 1 Score: 61.2 bits (147), Expect = 5.6e-06 Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of ClCG08G002950 vs. NCBI nr
Match: KAA0048493.1 (hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK28285.1 hypothetical protein E5676_scaffold600G001020 [Cucumis melo var. makuwa]) HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04 Identity = 42/64 (65.62%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of ClCG08G002950 vs. ExPASy TrEMBL
Match: A0A6J1EPK7 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.2e-07 Identity = 39/61 (63.93%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of ClCG08G002950 vs. ExPASy TrEMBL
Match: A0A0A0KAN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.7e-06 Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0
BLAST of ClCG08G002950 vs. ExPASy TrEMBL
Match: A0A5D3DY74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001020 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.7e-05 Identity = 42/64 (65.62%), Postives = 43/64 (67.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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