ClCG08G002790 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G002790
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Ulp1-like peptidase
Location	CG_Chr08: 6342425 .. 6343601 (-)
RNA-Seq Expression	ClCG08G002790
Synteny	ClCG08G002790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGACAAGAAGACCCAATTTGATATGAATACATTTGGGATTGTTGATGACCGTGAAGTCTTCACCCATTAATATTGGTCGTCTGTCTTGTTCAAGCATCTATTGAATAGTATAAAGACTATTTTGTGCGGGAAGAATGAGACCCCCAATATAAAGAAGGCAGACAATCCAAAGCACATCACATATTACTGTGTAAAGGGATTTATGCTTGCATTCCAGGTACGTGCTTTACCAATTAGGTCAATTCAATATGTATTTGTGATATTGAATATGTATGTGTAACAAAGTTTGTCTGTTATAGGGTTAGGCTTGCAGAATTACGTCCATATCTAGTAAGTTCGTAGCAACCAAAGTGAGCAAGAATGCAATACCACGAATCCTTAAGTAGACTTGTTCTCAAGCTCTATCCTATAAGTTGTTGGAGAGGAATGTATTCCAACTGAAGAAGATCATGGATCGTTTATAATTAACTATATGTTTAGATTAACCTACACGATCATTTAGAGTAATTTACACGATCGTTTAGAGTAATCTACATGATCGTTTAAAGTAATCTAGATGATTGCCTGGTTAATAATAAGTGATCGTTTAGACTTTTACTACACGATCACCTAGTTAAGACAAGCGATCGTTTATAGTAATCTACACGATTGCCTAGTTAAGAATAAGCAATCGTTTAGACTTTTACTACACGATCACCTAGTTAAGATAAGCGATCATTTATAGTAATCTACACGATCGCCTAGTTAAGAATAAGCGATCATTTAGAGTAATCTATATGATCACTTAGTAGTCAGTTGTTTTCAATATGCATTGACTTGTTCTCATCGTTACCTTACAGACTATTATTGTGGCGAAACTTGTGCCTACACAAGAGAAAGATAAGTACAAGGAGGATAAAGTAAGAGGACTTGAGCTAATGCCAGGTGTCAACACCACGTTAAAAGATCAACATTCTATTGACACTGAAACCAAAAATCACGAGACGTCTCATGAAGAACAAGTCGAGCAGCCTATCATAGAGCAACATATTACAGAGCATGAACCCCCTCAGTCACATAAAGAACAAGTTGACCACCCTATCACGGAGCAGCTTGGCATTGAGCCAGCAACACGTAGACTAGGTCTCACAATGGCCAGAAGGGTAAGAAAAGGCGTGTCGAATCTTTAG

mRNA sequence

ATGGAAAAAGACAAGAAGACCCAATTTGATATGAATACATTTGGGATTGTTGATGACCGTGAACATCTATTGAATAGTATAAAGACTATTTTGTGCGGGAAGAATGAGACCCCCAATATAAAGAAGGCAGACAATCCAAAGCACATCACATATTACTGTGTAAAGGGATTTATGCTTGCATTCCAGACTATTATTGTGGCGAAACTTGTGCCTACACAAGAGAAAGATAAGTACAAGGAGGATAAAGTAAGAGGACTTGAGCTAATGCCAGGTGTCAACACCACGTTAAAAGATCAACATTCTATTGACACTGAAACCAAAAATCACGAGACGTCTCATGAAGAACAAGTCGAGCAGCCTATCATAGAGCAACATATTACAGAGCATGAACCCCCTCAGTCACATAAAGAACAAGTTGACCACCCTATCACGGAGCAGCTTGGCATTGAGCCAGCAACACGTAGACTAGGTCTCACAATGGCCAGAAGGGTAAGAAAAGGCGTGTCGAATCTTTAG

Coding sequence (CDS)

ATGGAAAAAGACAAGAAGACCCAATTTGATATGAATACATTTGGGATTGTTGATGACCGTGAACATCTATTGAATAGTATAAAGACTATTTTGTGCGGGAAGAATGAGACCCCCAATATAAAGAAGGCAGACAATCCAAAGCACATCACATATTACTGTGTAAAGGGATTTATGCTTGCATTCCAGACTATTATTGTGGCGAAACTTGTGCCTACACAAGAGAAAGATAAGTACAAGGAGGATAAAGTAAGAGGACTTGAGCTAATGCCAGGTGTCAACACCACGTTAAAAGATCAACATTCTATTGACACTGAAACCAAAAATCACGAGACGTCTCATGAAGAACAAGTCGAGCAGCCTATCATAGAGCAACATATTACAGAGCATGAACCCCCTCAGTCACATAAAGAACAAGTTGACCACCCTATCACGGAGCAGCTTGGCATTGAGCCAGCAACACGTAGACTAGGTCTCACAATGGCCAGAAGGGTAAGAAAAGGCGTGTCGAATCTTTAG

Protein sequence

MEKDKKTQFDMNTFGIVDDREHLLNSIKTILCGKNETPNIKKADNPKHITYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHSIDTETKNHETSHEEQVEQPIIEQHITEHEPPQSHKEQVDHPITEQLGIEPATRRLGLTMARRVRKGVSNL

Homology

[Close]

BLAST of ClCG08G002790 vs. NCBI nr
Match: TYK18904.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-13
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 1   MEKDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPK 60
           + KDKKTQFDM+  G VDD E              LLN++KT L GK E   +KK  + K
Sbjct: 33  VRKDKKTQFDMDILGRVDDEEAFNSFDWSTFFYTRLLNNLKTSLQGKKEAYELKKTTSSK 92

Query: 61  HITYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGL-ELMPGVNTTLKDQHSIDTET 117
            + YY +KG++LAFQT++  KL  + ++  + E  +RG  ++    + +++D ++ DT T
Sbjct: 93  AVAYYNIKGYLLAFQTVVKPKLKLSTQEKAFMESPIRGNDDIQMEDDESIQDINNNDTNT 152

[Close]

BLAST of ClCG08G002790 vs. NCBI nr
Match: KAA0035385.1 (Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK03497.1 Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 82.0 bits (201), Expect = 5.4e-12
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MEKDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPK 60
           +EKDK+TQFDM+  G VDD E              LLNS+K IL GK E   +K+A   K
Sbjct: 2   VEKDKRTQFDMDILGKVDDEEVFKNFDWSTFFFTRLLNSLKIILQGKKEAYKLKRAKGSK 61

Query: 61  HITYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHSI-DTET 120
            + YY +KG++LAFQT++ AKL  + ++  + E ++RG +     N  ++D  S+ D + 
Sbjct: 62  VVAYYNIKGYILAFQTVVQAKLKLSTQEKAFMESRIRGDD-----NMKMEDDESMSDIDN 121

Query: 121 KNHETSHEEQVEQPIIEQHITEHEPPQ 134
            N+ TS++    Q +   ++     PQ
Sbjct: 122 SNNTTSNDTTNNQSLDNNNLQSTSSPQ 143

[Close]

BLAST of ClCG08G002790 vs. NCBI nr
Match: KAA0067769.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 7.8e-11
Identity = 53/159 (33.33%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFDM+  G VDD +              LL S+KT L GK E   +KK  + K +
Sbjct: 157 KDKKTQFDMDILGRVDDEKAFKNFDWSTFFYTRLLKSLKTSLRGKKEAYELKKTTSSKAV 216

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMP-GVNTTLKDQHSIDTETKN 122
            YY +KG++LAFQT++  KL  + ++  + E ++RG + M    + +++D ++ DT T +
Sbjct: 217 AYYNIKGYVLAFQTVVRPKLKLSTQEKAFMESRIRGDDNMQMEDDESVRDINNNDTNTPD 276

Query: 123 HETSHEEQVEQPIIEQHITEHEPPQSHKEQVD-HPITEQ 147
           H  +++   +     Q   + E  Q+  +Q + HPIT +
Sbjct: 277 HTMNNKSLEQSDSSPQLSPQREQSQTVADQSEMHPITNK 315

[Close]

BLAST of ClCG08G002790 vs. NCBI nr
Match: KAA0047742.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-10
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFDM+  G VDD E              LLNS+KT L GK E   +KK  + K +
Sbjct: 611 KDKKTQFDMDILGRVDDEEAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTRSSKAV 670

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHSI------- 122
           +YY +KG++LAFQ ++  KL  + ++  + + ++RG +     N  ++D  SI       
Sbjct: 671 SYYNIKGYVLAFQIVVQPKLKMSTQEKAFMDSRIRGDD-----NMQMEDDESIGAIRLIS 730

Query: 123 ---DTETKNHETSHEEQ-VEQPIIEQHITEHEPPQSHKEQ 139
               T T     S+++Q  E+   EQH   HE  Q   +Q
Sbjct: 731 TKRTTVTPKRTKSNKQQPTEEQHTEQHTEHHEETQREHQQ 765

[Close]

BLAST of ClCG08G002790 vs. NCBI nr
Match: TYJ95617.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-10
Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFD +  G VDD E              LLNS+KTIL GK E   +K+A + K +
Sbjct: 4   KDKKTQFDKDILGKVDDEEVFKNFNWSTFFYTRLLNSLKTILHGKKEAYELKRAKSSKTV 63

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHS-IDTETKN 122
            YY +KG++LAFQT++ AKL  + ++  + E ++RG +     N  ++D  S +D +  +
Sbjct: 64  AYYNIKGYVLAFQTVVQAKLKLSTQEKAFIESRIRGDD-----NMEIEDDESMLDIDNSD 123

Query: 123 HETSHEEQVEQPIIEQHITEHEPPQ 134
           + T  +    Q +   ++     PQ
Sbjct: 124 NTTPDDTTNNQSLDNNNLQSTSSPQ 143

[Close]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL
Match: A0A5D3D5R8 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001180 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.8e-13
Identity = 49/130 (37.69%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 1   MEKDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPK 60
           + KDKKTQFDM+  G VDD E              LLN++KT L GK E   +KK  + K
Sbjct: 33  VRKDKKTQFDMDILGRVDDEEAFNSFDWSTFFYTRLLNNLKTSLQGKKEAYELKKTTSSK 92

Query: 61  HITYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGL-ELMPGVNTTLKDQHSIDTET 117
            + YY +KG++LAFQT++  KL  + ++  + E  +RG  ++    + +++D ++ DT T
Sbjct: 93  AVAYYNIKGYLLAFQTVVKPKLKLSTQEKAFMESPIRGNDDIQMEDDESIQDINNNDTNT 152

[Close]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL
Match: A0A5A7T1R2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001170 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.6e-12
Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MEKDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPK 60
           +EKDK+TQFDM+  G VDD E              LLNS+K IL GK E   +K+A   K
Sbjct: 2   VEKDKRTQFDMDILGKVDDEEVFKNFDWSTFFFTRLLNSLKIILQGKKEAYKLKRAKGSK 61

Query: 61  HITYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHSI-DTET 120
            + YY +KG++LAFQT++ AKL  + ++  + E ++RG +     N  ++D  S+ D + 
Sbjct: 62  VVAYYNIKGYILAFQTVVQAKLKLSTQEKAFMESRIRGDD-----NMKMEDDESMSDIDN 121

Query: 121 KNHETSHEEQVEQPIIEQHITEHEPPQ 134
            N+ TS++    Q +   ++     PQ
Sbjct: 122 SNNTTSNDTTNNQSLDNNNLQSTSSPQ 143

[Close]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL
Match: A0A5A7VRJ2 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00930 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.8e-11
Identity = 53/159 (33.33%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFDM+  G VDD +              LL S+KT L GK E   +KK  + K +
Sbjct: 157 KDKKTQFDMDILGRVDDEKAFKNFDWSTFFYTRLLKSLKTSLRGKKEAYELKKTTSSKAV 216

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMP-GVNTTLKDQHSIDTETKN 122
            YY +KG++LAFQT++  KL  + ++  + E ++RG + M    + +++D ++ DT T +
Sbjct: 217 AYYNIKGYVLAFQTVVRPKLKLSTQEKAFMESRIRGDDNMQMEDDESVRDINNNDTNTPD 276

Query: 123 HETSHEEQVEQPIIEQHITEHEPPQSHKEQVD-HPITEQ 147
           H  +++   +     Q   + E  Q+  +Q + HPIT +
Sbjct: 277 HTMNNKSLEQSDSSPQLSPQREQSQTVADQSEMHPITNK 315

[Close]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL
Match: A0A5A7TW86 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1059G00010 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 6.4e-11
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFDM+  G VDD E              LLNS+KT L GK E   +KK  + K +
Sbjct: 611 KDKKTQFDMDILGRVDDEEAFKSFDWSTFFYTRLLNSLKTSLQGKKEAYELKKTRSSKAV 670

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHSI------- 122
           +YY +KG++LAFQ ++  KL  + ++  + + ++RG +     N  ++D  SI       
Sbjct: 671 SYYNIKGYVLAFQIVVQPKLKMSTQEKAFMDSRIRGDD-----NMQMEDDESIGAIRLIS 730

Query: 123 ---DTETKNHETSHEEQ-VEQPIIEQHITEHEPPQSHKEQ 139
               T T     S+++Q  E+   EQH   HE  Q   +Q
Sbjct: 731 TKRTTVTPKRTKSNKQQPTEEQHTEQHTEHHEETQREHQQ 765

[Close]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL
Match: A0A5D3B912 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00350 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 8.4e-11
Identity = 50/145 (34.48%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 3   KDKKTQFDMNTFGIVDDRE-------------HLLNSIKTILCGKNETPNIKKADNPKHI 62
           KDKKTQFD +  G VDD E              LLNS+KTIL GK E   +K+A + K +
Sbjct: 4   KDKKTQFDKDILGKVDDEEVFKNFNWSTFFYTRLLNSLKTILHGKKEAYELKRAKSSKTV 63

Query: 63  TYYCVKGFMLAFQTIIVAKLVPTQEKDKYKEDKVRGLELMPGVNTTLKDQHS-IDTETKN 122
            YY +KG++LAFQT++ AKL  + ++  + E ++RG +     N  ++D  S +D +  +
Sbjct: 64  AYYNIKGYVLAFQTVVQAKLKLSTQEKAFIESRIRGDD-----NMEIEDDESMLDIDNSD 123

Query: 123 HETSHEEQVEQPIIEQHITEHEPPQ 134
           + T  +    Q +   ++     PQ
Sbjct: 124 NTTPDDTTNNQSLDNNNLQSTSSPQ 143

The following BLAST results are available for this feature:

BLAST of ClCG08G002790 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK18904.1	3.7e-13	37.69	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0035385.1	5.4e-12	35.37	Ulp1-like peptidase [Cucumis melo var. makuwa] >TYK03497.1 Ulp1-like peptidase [...	[more]
KAA0067769.1	7.8e-11	33.33	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]
KAA0047742.1	1.3e-10	34.38	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
TYJ95617.1	1.7e-10	34.48	Ulp1-like peptidase [Cucumis melo var. makuwa]	[more]

BLAST of ClCG08G002790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG08G002790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5R8	1.8e-13	37.69	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G...	[more]
A0A5A7T1R2	2.6e-12	35.37	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G...	[more]
A0A5A7VRJ2	3.8e-11	33.33	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G...	[more]
A0A5A7TW86	6.4e-11	34.38	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1...	[more]
A0A5D3B912	8.4e-11	34.48	Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G...	[more]

BLAST of ClCG08G002790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G002790.1	ClCG08G002790.1	mRNA