ClCG08G002240 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G002240
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr08: 4748015 .. 4748446 (+)
RNA-Seq ExpressionClCG08G002240
SyntenyClCG08G002240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTTATTGCGTTGGGTCCTAAGGCACGTCGGGTAAAGATTGGCACTACGTCAATATGCTCCCGTGTTCTTTACTGCGTTAGGTTCTAAGGCACGTCGGGTAAAGATTGGCACTACGTCAATATGCTCCCGTGTTCTTTACTGCGTTAGGTCCTAAGGCACGTCTGGTAAAGATTGGCACTATGTCAATACGCCCCGTGCTCCTTACTACATTGGAGGTCAGAGGACATGTCGGGTATAGATTGACACTAAGTCAATACGCCCTCGTGTTACTTACTACGTTGCACCATCATTCTAAAGATGGATGAAGTGAAGATGCACCAATATTTTGGAGAGAAGGTAGACTTGTACCAACATTTTGGAGATGAAGCAAAATCGCACCAGTATTTAGTAGATGAGGCAGAGCTGCACCAACATTTTGGAGATTAA

mRNA sequence

ATGTTCTTTATTGCGTTGGGTCCTAAGGCACGTCGGGTAAAGATTGGCACTACGTCAATATGCTCCCGTCCTAAGGCACGTCTGGTAAAGATTGGCACTATGTCAATACGCCCCGTGCTCCTTACTACATTGGAGGTCAGAGGACATGTCGGGTATAGATTGACACTAAGTCAATACGCCCTCATGGATGAAGTGAAGATGCACCAATATTTTGGAGAGAAGGTAGACTTGTACCAACATTTTGGAGATGAAGCAAAATCGCACCAGTATTTAGTAGATGAGGCAGAGCTGCACCAACATTTTGGAGATTAA

Coding sequence (CDS)

ATGTTCTTTATTGCGTTGGGTCCTAAGGCACGTCGGGTAAAGATTGGCACTACGTCAATATGCTCCCGTCCTAAGGCACGTCTGGTAAAGATTGGCACTATGTCAATACGCCCCGTGCTCCTTACTACATTGGAGGTCAGAGGACATGTCGGGTATAGATTGACACTAAGTCAATACGCCCTCATGGATGAAGTGAAGATGCACCAATATTTTGGAGAGAAGGTAGACTTGTACCAACATTTTGGAGATGAAGCAAAATCGCACCAGTATTTAGTAGATGAGGCAGAGCTGCACCAACATTTTGGAGATTAA

Protein sequence

MFFIALGPKARRVKIGTTSICSRPKARLVKIGTMSIRPVLLTTLEVRGHVGYRLTLSQYALMDEVKMHQYFGEKVDLYQHFGDEAKSHQYLVDEAELHQHFGD
Homology
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BLAST of ClCG08G002240 vs. NCBI nr
Match: XP_038887242.1 (LWamide neuropeptides-like [Benincasa hispida])

HSP 1 Score: 59.3 bits (142), Expect = 2.2e-05
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0 

Query: 47  RGHVGYRLTLSQYALMDEVKMHQYFGEKVDLYQHFGDEAKSHQYLVDEAELHQHFGD 104
           R + G      QY L DEVK HQY GEK   +Q+FGDEAK HQYL D+A+ HQ+ GD
Sbjct: 28  RQYFGDEAKPHQY-LRDEVKPHQYLGEKAKPHQYFGDEAKLHQYLEDKAKPHQYLGD 83

The following BLAST results are available for this feature:
BLAST of ClCG08G002240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038887242.12.2e-0556.14LWamide neuropeptides-like [Benincasa hispida][more]
BLAST of ClCG08G002240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG08G002240 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG08G002240 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G002240.1ClCG08G002240.1mRNA