ClCG08G002070 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G002070
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionEgg cell-secreted protein 1.2-like
LocationCG_Chr08: 4358219 .. 4361227 (+)
RNA-Seq ExpressionClCG08G002070
SyntenyClCG08G002070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCATTACTTTCAAGCTCTTCTTTGTCATTTCTTTGCTACCTCTTGTTGTTACTACCTCCATGGCGTTGGATGCTACGACGATGACAAATTGTTTGAACCCTTTGCTTCAATCATGTAGGAATGAAATAGTGATGTTCATTACAAATAACGGTTTGGTCGTTATAAGTTCAGCTTATTGTCAAGCAATTCTAAATTTTCGTCGTGAGTGTTTATCTGAATTTCTTAGTTCATTAGGGCTTACTGACCAAGACGTCAATATTCTTGAATCTTATTGCAAATTGATTGCAAAGTTTTCACCTTCTCAGTTATCACCATGAATGAATATCTTTTTCATTAACTCCATTACTTTTGTCCTATGGAGGTTACCTAAGTCCAAGGTTGCTAAAATGCAATAAATAAAGGAAAGTCTTGATGTTTTAGTTTTTGGTTGTAAGGTTACTTTAAACTTCTAATAAAAATAACTACTTGTTTGGGATTTGGTTCCATATTGGAATATAATAATAGTGAAAACACCTATATAGACTTCGGTTTTTTAAAATTTGTTCCCTAAATCTAACATTTAGTTCAAGATTTGTCAAGATTTTTTTTTGTCCATGTTGCGAAAAATGTTGTTAAGATCTAACAAGTACACATATACTTGGTTTTTACTTGTGGAATTAATTTGAATTCTTATTTATTTATTTATTAATTTGTTCATGGAGGCTGGTTTTCGAGCTGGATCCCCAAAGAATGGAATCTTCGGGTTTGATAAGCTAATTCATTAGCGACATTGTTACTGATCTTGTGGTTGATCAAATGGAAGCCTTTAATCGACCCCTTATTTTGAAGTATTATTTTGTTAGTACATTATTGTCATCAACTTATAATAGTTCAATTTGTATCTTACAATCATTTTATGTGTATATCAATTATAGAATTTGTTGGTTAATCAACATGTAACTAGGTATATCAATAAGTTGTATTTAATTGTCATGTATACGAATGACCTACATACATTAATGTTTATGAAATATATCAATGCTACACGTCTATATTAAGTAATTGTCAAGTATATCATGTATACGTGTCTAAATAGAGAAATCATAATGTATGAAAGTCATTGATATACTTAATATCAAATAAAGGTCATGAATGATGTAATAAAATAGATATGTGTTATCAATGATACATGAACTGAAATTTACTAATGATATATCTATGATAGGCATATCAATGATACTACACAAAACTTAAAGTGTATCAGTAATAATATCAACACTCATGTAAAATACAATTTATCAAGTATAACATTAGTGAATTAATAGTATACCAATACTTACTCAAAATTTGTCCCCATGGGGTTTCATAGCTAGCTTTGGGATAGTTCTTCATCTCACTAGGCTAAGGGGCGTACCTCATTTTGTATTTTTCCAAGGTTAGGTTCGACCTTTGGCCTTGGCTGAGGCCGAACACCTTCTCCTGAGCCCATTTTTGTCCTAGGGTGAGACTTTGGGCCAGGGAATATACAATACATGTCCTATTATTTAGTCGAGCACATTAATTTGGGCCCTAACTTGAGTTAATCCTCTTCCCTAGGCCTAAAATGGCCCACAATGCTATTTTTAGCCTGAACCTTGTTATCATCCTGGCCTTGTCGCTTTTGTCCCTATTTTATGTCGATTATACCCTTTGGTCTAAAATCACAGTATATATATTAATGTATGAACATCTTCCTGTTTTGGTTTGTTATTCATCTTATTTAGAAGTTGTTGGTAGTCTTTTCTTGCATTTATTTTATACTTCTCTTAACCATTGATTTAATCTTTAGTTTAAGAGCAAATTCTTCTATTCGGGTAGTTTCTTGACTTTCACAGCTGCTTACCCTTTTTTATTTTATTTTGTTTTATCAAGAGTTTGTTTGGATTAACTTAAAAAATAAATGTTTTTAAAAAATTCTTTTTCATTTAAACACTTTAAACACTTTATTAAGGGTTAGAAGTGTTTAAAATAAAGACACTAAATGACTTTCAAAATCTATTTTAAATATTTGCCAAACATTGTATTTCTTTCAAAAAGATTTATTTTTTAAAATTAAACACTTGAAAAGGTAATCCAAACACACCCTAAGTTTACATTTACACAACCTTGTTAATTTACTTTTACCACCTAACATTCCTATACAAAACTTGAGGTATTATTTTCATACTCTTCGAGTACATGAATTGGTATCAGAGCTTTGATCTAAGGCCATAAAATTATTCTTTTTGAAATTAGATTACCAACCATGAAAGCCAAAGCTTCTTCATTTTTAGGATTCGACCATTGCTTGAGAGTGGTAGAAAACCCCATCCTTCAAATGAATCACAACATCCCCATTCTCACAAAGGTTTGTGGAACATATTTGTAACACTCTCAATTTAGGAGGGTGACATTAATGAACTGAGATCACATTCGAATGAGAAGGATCTTGAGAATATGAAAGTATGTTTAGAAAGGCTTAAAAGAATTGAAAGTTACTACGTATACCAACAAGGTGCACCTTCTTTTTTCAGTGGCTCAATCATAGGAACTCCAAAATTAAGCGTGCTTAGTTTAAAGCAATTTCGTGTCGGGTGACTTCTTAGAAATGTTTCTAAGAAATATGTGTGTGAGTACAAAGAATGCGAAAGAAATTGTATTGGTTGGTGGGTACAAAAGTTAATATACAAGATCTGTGGAACATATTATACCAAACAAACTATTAGTAGTCAATCTCAATGTTCACCTGAGAGTTATAAATATCCAACAACTTGCTGCACCACAATCAGATCTTTCCAGAACACAGCATTGTTCCTTTAAGAAGGCAAGAAAAGGCAGGCCCTAGACGTTAACATGAGGGTTAAATGCCTTAGTATATGATGCAAGATTCTGAGTCTTCAGATGAAGATGATGTTTTTAATCTAGAAAGAGCTCCAAGAAGATTGAAAGGAAGGGAATTTGATCAAGAACAAGAAGTAATCATGATAAGGATCGACCTTTTCTAG

mRNA sequence

ATGGCTTCCATTACTTTCAAGCTCTTCTTTGTCATTTCTTTGCTACCTCTTGTTGTTACTACCTCCATGGCGTTGGATGCTACGACGATGACAAATTGTTTGAACCCTTTGCTTCAATCATGTAGGAATGAAATAGTGATGTTCATTACAAATAACGGTTTGGTCGTTATAAGTTCAGCTTATTGTCAAGCAATTCTAAATTTTCGTCGTGAGTGTTTATCTGAATTTCTTAGTTCATTAGGGCTTACTGACCAAGACGCTGGTTTTCGAGCTGGATCCCCAAAGAATGGAATCTTCGGTTTAAGAGCAAATTCTTCTATTCGGATTACCAACCATGAAAGCCAAAGCTTCTTCATTTTTAGGATTCGACCATTGCTTGAGAGTGGTAGAAAACCCCATCCTTCAAATGAATCACAACATCCCCATTCTCACAAAGATTCTGAGTCTTCAGATGAAGATGATGTTTTTAATCTAGAAAGAGCTCCAAGAAGATTGAAAGGAAGGGAATTTGATCAAGAACAAGAAGTAATCATGATAAGGATCGACCTTTTCTAG

Coding sequence (CDS)

ATGGCTTCCATTACTTTCAAGCTCTTCTTTGTCATTTCTTTGCTACCTCTTGTTGTTACTACCTCCATGGCGTTGGATGCTACGACGATGACAAATTGTTTGAACCCTTTGCTTCAATCATGTAGGAATGAAATAGTGATGTTCATTACAAATAACGGTTTGGTCGTTATAAGTTCAGCTTATTGTCAAGCAATTCTAAATTTTCGTCGTGAGTGTTTATCTGAATTTCTTAGTTCATTAGGGCTTACTGACCAAGACGCTGGTTTTCGAGCTGGATCCCCAAAGAATGGAATCTTCGGTTTAAGAGCAAATTCTTCTATTCGGATTACCAACCATGAAAGCCAAAGCTTCTTCATTTTTAGGATTCGACCATTGCTTGAGAGTGGTAGAAAACCCCATCCTTCAAATGAATCACAACATCCCCATTCTCACAAAGATTCTGAGTCTTCAGATGAAGATGATGTTTTTAATCTAGAAAGAGCTCCAAGAAGATTGAAAGGAAGGGAATTTGATCAAGAACAAGAAGTAATCATGATAAGGATCGACCTTTTCTAG

Protein sequence

MASITFKLFFVISLLPLVVTTSMALDATTMTNCLNPLLQSCRNEIVMFITNNGLVVISSAYCQAILNFRRECLSEFLSSLGLTDQDAGFRAGSPKNGIFGLRANSSIRITNHESQSFFIFRIRPLLESGRKPHPSNESQHPHSHKDSESSDEDDVFNLERAPRRLKGREFDQEQEVIMIRIDLF
Homology
[Close]
BLAST of ClCG08G002070 vs. NCBI nr
Match: KGN45861.1 (hypothetical protein Csa_005369 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 7.8e-25
Identity = 70/93 (75.27%), Postives = 76/93 (81.72%), Query Frame = 0 

Query: 1  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNG 60
          MASI FKLFF++SLL LV+ T       SMAL+ATT  NC NPLLQSCRNEI+ FITNNG
Sbjct: 1  MASIAFKLFFLVSLLALVLPTSMAMNGSSMALNATTTMNCFNPLLQSCRNEILTFITNNG 60

Query: 61 LVVISSAYCQAILNFRRECLSEFLSSLGLTDQD 87
          LVVI SA CQAILNFRRECLSEFLSSLG+T QD
Sbjct: 61 LVVIRSACCQAILNFRRECLSEFLSSLGITVQD 93

[Close]
BLAST of ClCG08G002070 vs. NCBI nr
Match: KAA0035017.1 (egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa] >TYK02355.1 egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 2.3e-24
Identity = 70/93 (75.27%), Postives = 76/93 (81.72%), Query Frame = 0 

Query: 1  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNG 60
          MASI FKLFF+ISLL LV+ T       SMAL+ATT  NC NPLLQSCRNEIV FITNNG
Sbjct: 1  MASIAFKLFFLISLLVLVLPTSMALNGGSMALNATTTMNCFNPLLQSCRNEIVTFITNNG 60

Query: 61 LVVISSAYCQAILNFRRECLSEFLSSLGLTDQD 87
          LVVI SA CQAILNFRR+CLSEFL+SLG+T QD
Sbjct: 61 LVVIRSACCQAILNFRRDCLSEFLTSLGITLQD 93

[Close]
BLAST of ClCG08G002070 vs. ExPASy TrEMBL
Match: A0A0A0KDK2 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G014810 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.8e-25
Identity = 70/93 (75.27%), Postives = 76/93 (81.72%), Query Frame = 0 

Query: 1  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNG 60
          MASI FKLFF++SLL LV+ T       SMAL+ATT  NC NPLLQSCRNEI+ FITNNG
Sbjct: 1  MASIAFKLFFLVSLLALVLPTSMAMNGSSMALNATTTMNCFNPLLQSCRNEILTFITNNG 60

Query: 61 LVVISSAYCQAILNFRRECLSEFLSSLGLTDQD 87
          LVVI SA CQAILNFRRECLSEFLSSLG+T QD
Sbjct: 61 LVVIRSACCQAILNFRRECLSEFLSSLGITVQD 93

[Close]
BLAST of ClCG08G002070 vs. ExPASy TrEMBL
Match: A0A5D3BT50 (Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00520 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.1e-24
Identity = 70/93 (75.27%), Postives = 76/93 (81.72%), Query Frame = 0 

Query: 1  MASITFKLFFVISLLPLVVTT-------SMALDATTMTNCLNPLLQSCRNEIVMFITNNG 60
          MASI FKLFF+ISLL LV+ T       SMAL+ATT  NC NPLLQSCRNEIV FITNNG
Sbjct: 1  MASIAFKLFFLISLLVLVLPTSMALNGGSMALNATTTMNCFNPLLQSCRNEIVTFITNNG 60

Query: 61 LVVISSAYCQAILNFRRECLSEFLSSLGLTDQD 87
          LVVI SA CQAILNFRR+CLSEFL+SLG+T QD
Sbjct: 61 LVVIRSACCQAILNFRRDCLSEFLTSLGITLQD 93

The following BLAST results are available for this feature:
BLAST of ClCG08G002070 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45861.17.8e-2575.27hypothetical protein Csa_005369 [Cucumis sativus][more]
KAA0035017.12.3e-2475.27egg cell-secreted protein 1.2-like [Cucumis melo var. makuwa] >TYK02355.1 egg ce... [more]
BLAST of ClCG08G002070 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG08G002070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDK23.8e-2575.27Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0148... [more]
A0A5D3BT501.1e-2475.27Egg cell-secreted protein 1.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
BLAST of ClCG08G002070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 32..83
e-value: 6.4E-7
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G002070.1ClCG08G002070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009567 double fertilization forming a zygote and endosperm
cellular_component GO:0110165 cellular anatomical entity