ClCG08G001550 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTAGATATGTAAACAAGCGGTAGGAAAAACTACAAGCATCTGTGAGGTAAGTTTGAGGATAGTAAACTTGTGGAGTCCCTAACAGAGCTGGTACAAAATGGAGGTTGGTGAGCTGATAATGGTACATTTAGGCTTGGTTATTTGCAACAATTGGAAAAGATGATGAGTGAGAAAATTCCAGGTTGCAACCTAAAAGCAACCCCACACCTTGAGTCTAGAATAAAGGTCCTAAAGAGGCAATGCAATGCAATAGCTTAACTGTTGGGTCCAACATGTAGTGGATTTTGTTGGAATGAAGAGGTAAAGAGTGTCGATGTTGAATAGAATATTTATGATGAGTGGGTAAAGGTAAGAATGTGTTTGCAAAATATTAAATAAAAATCATGCTTATATGTAATAATTATATATTTTCTATAATTAACATCCAAAGTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGAGTAGAACATGCAATTACAATTGGATGAGTTTGAAATCCTAAACGCAGTACTCGGGAAAATATATTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTATTGATATGGTGAAATTTATGAGTATGCAAACCATTGAGCTTCAAAGAATTTCTCCTTAGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA ATGGATGTAGATATTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGATACTCGGGAAAATATATTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTATTGATATGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA ATGGATGTAGATATTCACCCTAATGCAAAAGGGTTACGAAGGAAAGTCTTCGTCCATTTTGAGGAGCTAGCAGTAATATTTGGAAAAGATCGGACTATCAGAGAAGGTGTGGAGACACCTACTGATATGACATTCGATATGAATGAGACAGATACTCGGGAAAATATATTGGGGGATGAGACACCAACCATACCTACGAGTAGGATCAATGGAGTAGGATCATTCTCTAGAGGGAGTAAGAGGAAGCAATCTAGCCCAATAAATTCTATTGATATGCATAAGGATGAGAAAGAGGTGGAGGCCCTTCGACGACAAGCACTTGACAAACTTCAGGAGATGCATGATCTGAATAGTAATGATCGTGTTAAGGTAGCTGAGGCTTTGTTCAAAGATGTTTATAAGATCGATTTGTTCCTAGCTGCACCAGATTATAATTGA MDVDIHPNAKGLRRKVFVHFEELAVIFGKDRTIREGVETPTDMTFDMNETDTRENILGDETPTIPTSRINGVGSFSRGSKRKQSSPINSIDMHKDEKEVEALRRQALDKLQEMHDLNSNDRVKVAEALFKDVYKIDLFLAAPDYN Homology
BLAST of ClCG08G001550 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida]) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08 Identity = 46/156 (29.49%), Postives = 78/156 (50.00%), Query Frame = 0
BLAST of ClCG08G001550 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia]) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-06 Identity = 52/180 (28.89%), Postives = 83/180 (46.11%), Query Frame = 0
BLAST of ClCG08G001550 vs. NCBI nr
Match: XP_038877524.1 (uncharacterized protein LOC120069782 [Benincasa hispida]) HSP 1 Score: 62.0 bits (149), Expect = 4.9e-06 Identity = 36/102 (35.29%), Postives = 54/102 (52.94%), Query Frame = 0
BLAST of ClCG08G001550 vs. NCBI nr
Match: VVA26458.1 (PREDICTED: At2g29880 [Prunus dulcis]) HSP 1 Score: 61.6 bits (148), Expect = 6.4e-06 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 0
BLAST of ClCG08G001550 vs. NCBI nr
Match: KAG6468192.1 (hypothetical protein ZIOFF_072763 [Zingiber officinale]) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-05 Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 0
BLAST of ClCG08G001550 vs. ExPASy TrEMBL
Match: A0A5E4FL81 (PREDICTED: At2g29880 OS=Prunus dulcis OX=3755 GN=ALMOND_2B024138 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.1e-06 Identity = 43/145 (29.66%), Postives = 67/145 (46.21%), Query Frame = 0
BLAST of ClCG08G001550 vs. ExPASy TrEMBL
Match: A0A6P5U2X6 (uncharacterized protein At2g29880-like OS=Prunus avium OX=42229 GN=LOC110773273 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.2e-05 Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = 0
BLAST of ClCG08G001550 vs. ExPASy TrEMBL
Match: A0A2P6PUC3 (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0284621 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 5.8e-05 Identity = 47/167 (28.14%), Postives = 76/167 (45.51%), Query Frame = 0
BLAST of ClCG08G001550 vs. ExPASy TrEMBL
Match: A0A2P6PRT6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0274461 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 5.8e-05 Identity = 47/167 (28.14%), Postives = 76/167 (45.51%), Query Frame = 0
BLAST of ClCG08G001550 vs. ExPASy TrEMBL
Match: A0A2P6QKN4 (Putative Myb/SANT-like domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0072391 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 7.6e-05 Identity = 44/168 (26.19%), Postives = 74/168 (44.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|