ClCG08G001080 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G001080
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPentatricopeptide repeat-containing protein
LocationCG_Chr08: 2260684 .. 2263060 (+)
RNA-Seq ExpressionClCG08G001080
SyntenyClCG08G001080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTTCGTCCTCCTTCATTCTCTCCCTTCATCTTCACCCTCTCCCTCCAAATCCTCTCGCCGCCGCCGCCACTATTTCCAATTCCGGCCACCAACTCTCCCGAATCAAATCCCCTACACAATCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAAACGAAACCGCCCAACTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGAGGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACAATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACTGATGCCAAACAGATTCACGCGCATATCCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGCTCCTTGGAAGATGCACAGAAGCTGTTCGATGAAAGTTCTAGCAAGAGTATTTATCCTTGGAATGCTTTGCTTAGAGGCACTGTAATGGCGGGTCGCCGGGATTATCGTAGCATTCTATCGACTTATGCAGAAATGCGAAGACTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGTTTTGCAGGTGCATCGGCGCTTACACAGGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGGTTAGCAATTCAATTCTAGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAAATCAAACTTGGCCGCCAGGTGTTTGAGGAAATTACCGAGAGAGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGATAGACCATGGAATTAGACCGAATTCGGTTATATTGACGACTATTCTTCCAGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAGAGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGTGGGGACATCGGTTCGGGTAGAGCAGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGACTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAAGAAGGATTTAGACCGGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTGAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTTTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATGGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCAGTGTCCACATGAAGCAATTGGTATATTCAGAGCAATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAAATAAAAATGCTGAAAATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGTCGGTCCATTTCGTTTCTGCGGAACTAGTGAAGCTATATGGGAAATGTAGAGCAGTAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACAGCCATTATCGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTGTGGTATCTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTTGTTGATGATGCACTGCGCATCTTCAAGCTAATGTCTGTTAGGTATAAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTGCGATTCTTACTCGGTTTGGTCGAATTGAGGAGGCTAGAAGGTATGTACAGATGAGTTCTTCATTGTCATAAGTTTTATTTTGTGTTTTGTCCATAATTGAGCTGAGCTCCTTGATTGGTTATTTGAATGCAACAAAATGCAAATGTACACATACATCTGATTCTTATGTATTGTATATGTTGATCTTTTTGTGTATATTCTTTAGTTTGGGAGAACTGAAGGATAAATTCAAATTTTGTGATCAATTTGGTTATTTATTTATTTATATTTTCTGTGAGTATAATGTAGGATGAGGAAATCAACTTTTGATGTCAAGGAAGATAATGTGTGTATTTATTTATTTAGTTATGCTCGGATTTACCTTTGTAA

mRNA sequence

ATGGAAATTTCGTCCTCCTTCATTCTCTCCCTTCATCTTCACCCTCTCCCTCCAAATCCTCTCGCCGCCGCCGCCACTATTTCCAATTCCGGCCACCAACTCTCCCGAATCAAATCCCCTACACAATCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAAACGAAACCGCCCAACTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGAGGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACAATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACTGATGCCAAACAGATTCACGCGCATATCCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGCTCCTTGGAAGATGCACAGAAGCTGTTCGATGAAAGTTCTAGCAAGAGTATTTATCCTTGGAATGCTTTGCTTAGAGGCACTGTAATGGCGGGTCGCCGGGATTATCGTAGCATTCTATCGACTTATGCAGAAATGCGAAGACTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGTTTTGCAGGTGCATCGGCGCTTACACAGGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGGTTAGCAATTCAATTCTAGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAAATCAAACTTGGCCGCCAGGTGTTTGAGGAAATTACCGAGAGAGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGATAGACCATGGAATTAGACCGAATTCGGTTATATTGACGACTATTCTTCCAGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAGAGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGTGGGGACATCGGTTCGGGTAGAGCAGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGACTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAAGAAGGATTTAGACCGGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTGAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTTTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATGGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCAGTGTCCACATGAAGCAATTGGTATATTCAGAGCAATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAAATAAAAATGCTGAAAATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGTCGGTCCATTTCGTTTCTGCGGAACTAGTGAAGCTATATGGGAAATGTAGAGCAGTAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACAGCCATTATCGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTGTGGTATCTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTTGTTGATGATGCACTGCGCATCTTCAAGCTAATGTCTGTTAGGTATAAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTGCGATTCTTACTCGGTTTGGTCGAATTGAGGAGGCTAGAAGGATGAGGAAATCAACTTTTGATGTCAAGGAAGATAATTTATGCTCGGATTTACCTTTGTAA

Coding sequence (CDS)

ATGGAAATTTCGTCCTCCTTCATTCTCTCCCTTCATCTTCACCCTCTCCCTCCAAATCCTCTCGCCGCCGCCGCCACTATTTCCAATTCCGGCCACCAACTCTCCCGAATCAAATCCCCTACACAATCACTGACGGATACACCGCCGTCAAAATTCAAAATAGTTTCCAAATTTCGGAAACGAAACCGCCCAACTTTTGCCGAGAAAGATGCTTTTCCTTCATCTTTACCACTTCACACCAAGAACCCTCATGCCATCTACGAGGACATTCAAAGATTTGCGCGGCAAAATAAGCTCAAAGAGGCACTTACAATTATGGACTATTTGGATCAACAAGGCATCCCAGTTAATGCGACTACATTTTCTTCTCTTATTACTGCTTGTGTTAGAACCAAATCGATGACTGATGCCAAACAGATTCACGCGCATATCCGGATAAATGGACTTGAAAACAATGAATTTCTGCGTACTAGGCTTGTGCATATGTATACTGCTTGTGGCTCCTTGGAAGATGCACAGAAGCTGTTCGATGAAAGTTCTAGCAAGAGTATTTATCCTTGGAATGCTTTGCTTAGAGGCACTGTAATGGCGGGTCGCCGGGATTATCGTAGCATTCTATCGACTTATGCAGAAATGCGAAGACTGGGGGTTGAATTGAACGTTTACTCTTTTGCTAATATCATTAAAAGTTTTGCAGGTGCATCGGCGCTTACACAGGGGCTCAAGGCCCATGGCCTTTTGATTAAAAATGGATTGGTTAGCAATTCAATTCTAGGGACAACTTTGATTGATATGTACTTCAAATGTGGTAAAATCAAACTTGGCCGCCAGGTGTTTGAGGAAATTACCGAGAGAGATGTTGTGGTTTGGGGATCAATAATTGCTGGTTTTGCTCACAATCGACTCCAAAGGGAAGCTTTGGAATATACGAGGAGGATGATAGACCATGGAATTAGACCGAATTCGGTTATATTGACGACTATTCTTCCAGTTATTGGAGAAATCTGGGCCAGGAGATTAGGCCAGGAAGTTCATGCTTATGTTATAAAGACAAAGAGTTACTCAAAGCAGATATTTATTCAGTCTGCTTTGATTGATATGTATTGCAAGTGTGGGGACATCGGTTCGGGTAGAGCAGTTTTTTATGCATCCATGGAGAGGAATGCTATATGTTGGACTGCTTTGATGTCTGGTTATGCTTTAAATGGCAGACTAGAGCAGGCTGTAAGATCAGTTATTTGGATGCAGCAAGAAGGATTTAGACCGGACGTCGTTACTGTCGCAACGATTCTTCCAGTTTGTGCTGAATTGAGAGCTCTGAGACCAGGAAAAGAGATTCATGCCTACGCTTTGAAGAATTGCTTCCTACCGAATGTATCTATTGTTTCATCCTTGATGGTAATGTACTCAAAATGTGGAGTAATGGACTATTCTCTAAAGCTTTTCAACAACATGGAGCAAAGAAATGTGATCTTATGGACAGCAATGATTGATTCATACATAGAAAATCAGTGTCCACATGAAGCAATTGGTATATTCAGAGCAATGCAGCTATCGAAGCATCGACCAGATACCGTTACCATGGCTAGAATCCTCTATGTATGCAGTGAAATAAAAATGCTGAAAATGGGGAAGGAGATACATGGACAAGTCTTGAAGAGGAAATTCGAGTCGGTCCATTTCGTTTCTGCGGAACTAGTGAAGCTATATGGGAAATGTAGAGCAGTAAAAATGGCAAAAATGGTGTTTGAGGCAATTCCTGTGAAGGGGTCAATGACATGGACAGCCATTATCGAAGCTTATGGAGAAAATGGAGAGTTTCAGGAAGCAATTGATCTGTTTGACCAAATGAGGTCCTGTGGTATCTCTCCAAACCATTTCACTTTCAAAGTGGTTCTATCTGTTTGTAAGGAAGCTGGTTTTGTTGATGATGCACTGCGCATCTTCAAGCTAATGTCTGTTAGGTATAAGATTAAGCCATCTGAAGAACATTACTCTTTAGTCATTGCGATTCTTACTCGGTTTGGTCGAATTGAGGAGGCTAGAAGGATGAGGAAATCAACTTTTGATGTCAAGGAAGATAATTTATGCTCGGATTTACCTTTGTAA

Protein sequence

MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRKRNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARRMRKSTFDVKEDNLCSDLPL
Homology
BLAST of ClCG08G001080 vs. NCBI nr
Match: XP_038889186.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa hispida])

HSP 1 Score: 1291.6 bits (3341), Expect = 0.0e+00
Identity = 650/683 (95.17%), Postives = 663/683 (97.07%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSFI SLHLHP PPNPLA A  ISNSG QLSRIKS TQS TDTPPSK K+VSKFR 
Sbjct: 1   MEISSSFIPSLHLHPFPPNPLAVA--ISNSGRQLSRIKSLTQSPTDTPPSKIKLVSKFRY 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           +NRP FAEKDAFPSSLPLHTKNPHAIYEDIQRFAR+NKLKEALTIMDYLDQQGIPVNATT
Sbjct: 61  KNRPAFAEKDAFPSSLPLHTKNPHAIYEDIQRFARKNKLKEALTIMDYLDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LK HGLLIKNGLV +SILGT+L+DMYFKCGKIKL RQVFEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKVHGLLIKNGLVGSSILGTSLVDMYFKCGKIKLARQVFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREALEYTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTK YSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKGYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSYIEN+CPHEAIGIFRAMQLSKHRPDTVTMARILYVCSE+KM
Sbjct: 481 LFNAMEQRNVILWTAMIDSYIENECPHEAIGIFRAMQLSKHRPDTVTMARILYVCSELKM 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKC AVKMAKMVFEAIPVKGSMTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGSMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YG+NGEF+EAIDLFDQMRS GISPNHFTFKVVLS+CKEAGFVDDA+RIFKLMSVRYKIKP
Sbjct: 601 YGDNGEFKEAIDLFDQMRSSGISPNHFTFKVVLSICKEAGFVDDAMRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARR 684
           SEEHYSLVIA+LTRFGRIEEARR
Sbjct: 661 SEEHYSLVIAVLTRFGRIEEARR 681

BLAST of ClCG08G001080 vs. NCBI nr
Match: KAA0039287.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 632/684 (92.40%), Postives = 656/684 (95.91%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSF++SLHL P PPN L AA+ I N GHQLSRIK    S TD PP K KIVSKFR 
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREAL YTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSY+ENQCPHEAI IFRAMQLSKHRPDTVTMARILYVCSE+KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YG+NGEFQEAIDLFD+MRSCGISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARRM 685
           SEEHYSLVIAILTRFGR+EEARR+
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARRV 680

BLAST of ClCG08G001080 vs. NCBI nr
Match: XP_008459588.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis melo])

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 630/683 (92.24%), Postives = 655/683 (95.90%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSF++SLHL P PPN L AA+ I N GHQLSRIK    S TD PP K KIVSKFR 
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREAL YTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSY+ENQCPHEAI IFRAMQLSKHRPDTVTMARILYVCSE+K+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YGENGEFQEAIDLFD+MRSCGISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARR 684
           SEEHYSLVIA+LTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARR 679

BLAST of ClCG08G001080 vs. NCBI nr
Match: XP_011656084.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sativus] >KGN52661.1 hypothetical protein Csa_008951 [Cucumis sativus])

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 631/683 (92.39%), Postives = 654/683 (95.75%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSFI+SLHL P  PN LA A  I NSGH+LSRIK    S TDTPPSK KIVSKFR 
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYED+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAHGLLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREALEYTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPD+VTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSYIENQCPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVSAELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARR 684
           SEEHYSLVIAILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARR 679

BLAST of ClCG08G001080 vs. NCBI nr
Match: XP_022141761.1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Momordica charantia])

HSP 1 Score: 1209.5 bits (3128), Expect = 0.0e+00
Identity = 610/693 (88.02%), Postives = 647/693 (93.36%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           ME SSS  LSLHLH  PPNPLAAA T  NSGHQLSR KS       T PS  KIV+ FR 
Sbjct: 1   METSSSITLSLHLHLFPPNPLAAANT--NSGHQLSRTKS------STLPSNIKIVANFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           ++RP FAEKDAFPSSLPLHTKNPHAIYEDIQ FAR+NKLKEALTIMDYLDQ+GIPVNATT
Sbjct: 61  QDRPVFAEKDAFPSSLPLHTKNPHAIYEDIQGFARRNKLKEALTIMDYLDQRGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE-- 180
           FSSLITACVRTKS+ DAKQIHAHIRINGLENNEFLRTRLVHMY+ACGSLEDAQKLFDE  
Sbjct: 121 FSSLITACVRTKSLGDAKQIHAHIRINGLENNEFLRTRLVHMYSACGSLEDAQKLFDESS 180

Query: 181 SSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSSKS+YPWNALLRGTVMAGRRDYRS+LSTYAEMRR+GVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSKSVYPWNALLRGTVMAGRRDYRSVLSTYAEMRRVGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFA 300
           QGLKAH LLIKNGLV +SILGT+LIDMYFKCGKIKLGRQVFEEITERDVVVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTSLIDMYFKCGKIKLGRQVFEEITERDVVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360
           HNRLQREALEYTR+MID GIRPNSVILTT+LPV+GE+WARRLGQE+HAYVIKTKSYSKQI
Sbjct: 301 HNRLQREALEYTRKMIDAGIRPNSVILTTVLPVLGEVWARRLGQEIHAYVIKTKSYSKQI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           FIQSALIDMYCKCGDIGSGRAVFY SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 FIQSALIDMYCKCGDIGSGRAVFYGSMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCAELRAL+PGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAELRALKPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS 480

Query: 481 LKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEI 540
           LKLF+ MEQRNVILWTAMIDSYIENQ  HEAIGIFRAMQLSKHRPDTVTMARILY+CSE+
Sbjct: 481 LKLFDGMEQRNVILWTAMIDSYIENQRLHEAIGIFRAMQLSKHRPDTVTMARILYICSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAII 600
           K LK+GKEIHGQVLKR FESVHFVSAELVKLYG C AV+ AK VFEAIPVKGSMTWTA+I
Sbjct: 541 KRLKLGKEIHGQVLKRNFESVHFVSAELVKLYGNCGAVQTAKTVFEAIPVKGSMTWTAVI 600

Query: 601 EAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKI 660
           EA+G+NGEFQEA++LFDQMRS GISPNHFTFKVVLS+C +AGFVD+ALRIFKLM VRYKI
Sbjct: 601 EAHGDNGEFQEAVNLFDQMRSSGISPNHFTFKVVLSICNKAGFVDEALRIFKLMLVRYKI 660

Query: 661 KPSEEHYSLVIAILTRFGRIEEARR---MRKST 689
           KPSEEHYSL++A+LTRFGR+EEARR   MR S+
Sbjct: 661 KPSEEHYSLLVAVLTRFGRLEEARRYVEMRSSS 685

BLAST of ClCG08G001080 vs. ExPASy Swiss-Prot
Match: Q9C9I3 (Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-A3 PE=2 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 3.4e-249
Identity = 419/678 (61.80%), Postives = 539/678 (79.50%), Query Frame = 0

Query: 8   ILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRKRNRPTFA 67
           + SL +  LP + L+   ++++  H+  +  +P +S     PS+ +  S    +    F 
Sbjct: 4   VSSLGIRDLPAS-LSVTTSLNHRPHRSDKDGAPAKS--PIRPSRTRRPSTSPAKKPKPFR 63

Query: 68  EKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITA 127
           E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L+ A
Sbjct: 64  ERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEA 123

Query: 128 CVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPW 187
           CVR KS+   KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQK+FDES+S ++Y W
Sbjct: 124 CVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSW 183

Query: 188 NALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLL 247
           NALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H L 
Sbjct: 184 NALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALA 243

Query: 248 IKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREAL 307
           IKNGL ++  L T+L+DMYFKCGK+ L R+VF+EI ERD+VVWG++IAG AHN+ Q EAL
Sbjct: 244 IKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 303

Query: 308 EYTRRMI-DHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALID 367
              R MI +  I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K+Y +Q F+ S LID
Sbjct: 304 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 363

Query: 368 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVT 427
           +YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPDVVT
Sbjct: 364 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 423

Query: 428 VATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNME 487
           +AT+LPVCAELRA++ GKEIH YALKN FLPNVS+V+SLMVMYSKCGV +Y ++LF+ +E
Sbjct: 424 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 483

Query: 488 QRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKE 547
           QRNV  WTAMID Y+EN      I +FR M LSKHRPD+VTM R+L VCS++K LK+GKE
Sbjct: 484 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 543

Query: 548 IHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGE 607
           +HG +LK++FES+ FVSA ++K+YGKC  ++ A   F+A+ VKGS+TWTAIIEAYG N  
Sbjct: 544 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 603

Query: 608 FQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYS 667
           F++AI+ F+QM S G +PN FTF  VLS+C +AGFVD+A R F LM   Y ++PSEEHYS
Sbjct: 604 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYS 663

Query: 668 LVIAILTRFGRIEEARRM 685
           LVI +L R GR+EEA+R+
Sbjct: 664 LVIELLNRCGRVEEAQRL 678

BLAST of ClCG08G001080 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-98
Identity = 192/595 (32.27%), Postives = 332/595 (55.80%), Query Frame = 0

Query: 90  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 149
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KS+ D K++   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 150 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTY 209
             +  L ++L  MYT CG L++A ++FDE   +    WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 210 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKC 269
            +M   GVE++ Y+F+ + KSF+   ++  G + HG ++K+G    + +G +L+  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 270 GKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTIL 329
            ++   R+VF+E+TERDV+ W SII G+  N L  + L    +M+  GI  +   + ++ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 330 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 389
               +     LG+ VH+  +K   +S++    + L+DMY KCGD+ S +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 390 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAELRALRPGKEIHAY 449
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA  R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 450 ALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEA 509
             +N    ++ + ++LM MY+KCG M  +  +F+ M  +++I W  +I  Y +N   +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 510 IGIFR-AMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVK 569
           + +F   ++  +  PD  T+A +L  C+ +     G+EIHG +++  + S   V+  LV 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 570 LYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSCGISPNHFT 629
           +Y KC A+ +A M+F+ I  K  ++WT +I  YG +G  +EAI LF+QMR  GI  +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 630 FKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARR 684
           F  +L  C  +G VD+  R F +M    KI+P+ EHY+ ++ +L R G + +A R
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657

BLAST of ClCG08G001080 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.3e-93
Identity = 177/552 (32.07%), Postives = 309/552 (55.98%), Query Frame = 0

Query: 130 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNA 189
           R  S+ + +QI   +  NGL    F +T+LV ++   GS+++A ++F+   SK    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 190 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 249
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 250 NGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 309
           +G   +    T L +MY KC ++   R+VF+ + ERD+V W +I+AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 310 TRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYC 369
            + M +  ++P+ + + ++LP +  +    +G+E+H Y +++  +   + I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 370 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 429
           KCG + + R +F   +ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 430 ILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRN 489
            L  CA+L  L  G+ IH  +++     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 490 VILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHG 549
           ++ W AMI  + +N  P +A+  F  M+    +PDT T   ++   +E+ +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 550 QVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 609
            V++   +   FV+  LV +Y KC A+ +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 610 AIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVI 669
           A++LF++M+   I PN  TF  V+S C  +G V+  L+ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 670 AILTRFGRIEEA 682
            +L R GR+ EA
Sbjct: 586 DLLGRAGRLNEA 594

BLAST of ClCG08G001080 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 339.3 bits (869), Expect = 1.0e-91
Identity = 200/648 (30.86%), Postives = 336/648 (51.85%), Query Frame = 0

Query: 61  RNRPTFAEKD------AFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQ--Q 120
           R  PT A +D        PS     +++P    + ++   R N L+EA  ++ Y+D    
Sbjct: 34  RATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVL 93

Query: 121 GIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLED 180
           GI  +   F +L+ A    + M   KQIHAH+   G   ++  +   LV++Y  CG    
Sbjct: 94  GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 153

Query: 181 AQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSF 240
             K+FD  S ++   WN+L+  + +     +   L  +  M    VE + ++  +++ + 
Sbjct: 154 VYKVFDRISERNQVSWNSLI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 213

Query: 241 AG---ASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVV 300
           +       L  G + H   ++ G + NS +  TL+ MY K GK+   + +      RD+V
Sbjct: 214 SNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 273

Query: 301 VWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYV 360
            W ++++    N    EALEY R M+  G+ P+   ++++LP    +   R G+E+HAY 
Sbjct: 274 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 333

Query: 361 IKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQA 420
           +K  S  +  F+ SAL+DMYC C  + SGR VF    +R    W A+++GY+ N   ++A
Sbjct: 334 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 393

Query: 421 VRSVIWMQQE-GFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMV 480
           +   I M++  G   +  T+A ++P C    A    + IH + +K     +  + ++LM 
Sbjct: 394 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 453

Query: 481 MYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQ-----LSKH- 540
           MYS+ G +D ++++F  ME R+++ W  MI  Y+ ++   +A+ +   MQ     +SK  
Sbjct: 454 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 513

Query: 541 -----RPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAV 600
                +P+++T+  IL  C+ +  L  GKEIH   +K    +   V + LV +Y KC  +
Sbjct: 514 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 573

Query: 601 KMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVC 660
           +M++ VF+ IP K  +TW  II AYG +G  QEAIDL   M   G+ PN  TF  V + C
Sbjct: 574 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 633

Query: 661 KEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARRM 685
             +G VD+ LRIF +M   Y ++PS +HY+ V+ +L R GRI+EA ++
Sbjct: 634 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676

BLAST of ClCG08G001080 vs. ExPASy Swiss-Prot
Match: Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-88
Identity = 177/599 (29.55%), Postives = 315/599 (52.59%), Query Frame = 0

Query: 90  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 149
           I  F R   L +AL     +   G+  + +TF  L+ ACV  K+      +   +   G+
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169

Query: 150 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTY 209
           + NEF+ + L+  Y   G ++   KLFD    K    WN +L G    G  D  S++  +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD--SVIKGF 229

Query: 210 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKC 269
           + MR   +  N  +F  ++   A    +  G++ HGL++ +G+     +  +L+ MY KC
Sbjct: 230 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 289

Query: 270 GKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTIL 329
           G+     ++F  ++  D V W  +I+G+  + L  E+L +   MI  G+ P+++  +++L
Sbjct: 290 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 349

Query: 330 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 389
           P + +       +++H Y+++  S S  IF+ SALID Y KC  +   + +F      + 
Sbjct: 350 PSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 409

Query: 390 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAELRALRPGKEIHAY 449
           + +TA++SGY  NG    ++    W+ +    P+ +T+ +ILPV   L AL+ G+E+H +
Sbjct: 410 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 469

Query: 450 ALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEA 509
            +K  F    +I  +++ MY+KCG M+ + ++F  + +R+++ W +MI    ++  P  A
Sbjct: 470 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 529

Query: 510 IGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVKL 569
           I IFR M +S    D V+++  L  C+ +     GK IHG ++K    S  +  + L+ +
Sbjct: 530 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 589

Query: 570 YGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQM-RSCGISPNHFT 629
           Y KC  +K A  VF+ +  K  ++W +II A G +G+ ++++ LF +M    GI P+  T
Sbjct: 590 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 649

Query: 630 FKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARRMRKS 688
           F  ++S C   G VD+ +R F+ M+  Y I+P +EHY+ V+ +  R GR+ EA    KS
Sbjct: 650 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705

BLAST of ClCG08G001080 vs. ExPASy TrEMBL
Match: A0A5A7TCH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00800 PE=4 SV=1)

HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 632/684 (92.40%), Postives = 656/684 (95.91%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSF++SLHL P PPN L AA+ I N GHQLSRIK    S TD PP K KIVSKFR 
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREAL YTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSY+ENQCPHEAI IFRAMQLSKHRPDTVTMARILYVCSE+KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKM 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YG+NGEFQEAIDLFD+MRSCGISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGKNGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARRM 685
           SEEHYSLVIAILTRFGR+EEARR+
Sbjct: 661 SEEHYSLVIAILTRFGRMEEARRV 680

BLAST of ClCG08G001080 vs. ExPASy TrEMBL
Match: A0A1S3CBS1 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498672 PE=4 SV=1)

HSP 1 Score: 1266.5 bits (3276), Expect = 0.0e+00
Identity = 630/683 (92.24%), Postives = 655/683 (95.90%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSF++SLHL P PPN L AA+ I N GHQLSRIK    S TD PP K KIVSKFR 
Sbjct: 1   MEISSSFLISLHLQPFPPNSLTAASAICNPGHQLSRIK----STTDIPPPKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTI+DY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTILDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMTDAKQIHAHIRINGLENNEF+RTRLVHMYTACGSLEDAQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEDAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAH LLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+FEEITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHSLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFEEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREAL YTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALVYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QS+LIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSSLIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPDVVTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGV+DYSLK
Sbjct: 421 RPDVVTVATILPVCAQLRALRPGKEIHAYAVKNCFLPNVSIVSSLMVMYSKCGVIDYSLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSY+ENQCPHEAI IFRAMQLSKHRPDTVTMARILYVCSE+K+
Sbjct: 481 LFNGMEQRNVILWTAMIDSYVENQCPHEAIDIFRAMQLSKHRPDTVTMARILYVCSELKV 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVS+ELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEQVHFVSSELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YGENGEFQEAIDLFD+MRSCGISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGENGEFQEAIDLFDRMRSCGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARR 684
           SEEHYSLVIA+LTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAVLTRFGRMEEARR 679

BLAST of ClCG08G001080 vs. ExPASy TrEMBL
Match: A0A0A0KXW0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1)

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 631/683 (92.39%), Postives = 654/683 (95.75%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           MEISSSFI+SLHL P  PN LA A  I NSGH+LSRIK    S TDTPPSK KIVSKFR 
Sbjct: 1   MEISSSFIISLHLQPFTPNSLAPATAICNSGHRLSRIK----STTDTPPSKIKIVSKFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           R RPTFAEKDAFPSSLPLHTKNPHAIYED+QRFARQNKLKEALTIMDY+DQQGIPVNATT
Sbjct: 61  RKRPTFAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESS 180
           FSSLITACVRTKSMT AKQIHAHIRINGLENNEF+RTRLVHMYTACGSLE+AQKLFDESS
Sbjct: 121 FSSLITACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS 180

Query: 181 SKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQG 240
           SKS+YPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASA TQG
Sbjct: 181 SKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQG 240

Query: 241 LKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHN 300
           LKAHGLLIKNGL+ +S+LGTTL+DMYFKCGKIKL RQ+F EITERDVVVWGSIIAGFAHN
Sbjct: 241 LKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHN 300

Query: 301 RLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360
           RLQREALEYTRRMID GIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI
Sbjct: 301 RLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFI 360

Query: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420
           QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF
Sbjct: 361 QSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGF 420

Query: 421 RPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLK 480
           RPD+VTVATILPVCA+LRALRPGKEIHAYA+KNCFLPNVSIVSSLMVMYSKCGVMDY+LK
Sbjct: 421 RPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIVSSLMVMYSKCGVMDYTLK 480

Query: 481 LFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKM 540
           LFN MEQRNVILWTAMIDSYIENQCPHEAI IFRAMQLSKHRPDTVTM+RILY+CSE KM
Sbjct: 481 LFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTMSRILYICSEQKM 540

Query: 541 LKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEA 600
           LKMGKEIHGQVLKRKFE VHFVSAELVKLYGKC AVKMAKMVFEAIPVKG MTWTAIIEA
Sbjct: 541 LKMGKEIHGQVLKRKFEPVHFVSAELVKLYGKCGAVKMAKMVFEAIPVKGPMTWTAIIEA 600

Query: 601 YGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKP 660
           YGE+GEFQEAIDLFD+MRS GISPNHFTFKVVLS+CKEAGFVD+ALRIFKLMSVRYKIKP
Sbjct: 601 YGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKEAGFVDEALRIFKLMSVRYKIKP 660

Query: 661 SEEHYSLVIAILTRFGRIEEARR 684
           SEEHYSLVIAILTRFGR+EEARR
Sbjct: 661 SEEHYSLVIAILTRFGRLEEARR 679

BLAST of ClCG08G001080 vs. ExPASy TrEMBL
Match: A0A6J1CK74 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012043 PE=4 SV=1)

HSP 1 Score: 1209.5 bits (3128), Expect = 0.0e+00
Identity = 610/693 (88.02%), Postives = 647/693 (93.36%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRK 60
           ME SSS  LSLHLH  PPNPLAAA T  NSGHQLSR KS       T PS  KIV+ FR 
Sbjct: 1   METSSSITLSLHLHLFPPNPLAAANT--NSGHQLSRTKS------STLPSNIKIVANFRN 60

Query: 61  RNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATT 120
           ++RP FAEKDAFPSSLPLHTKNPHAIYEDIQ FAR+NKLKEALTIMDYLDQ+GIPVNATT
Sbjct: 61  QDRPVFAEKDAFPSSLPLHTKNPHAIYEDIQGFARRNKLKEALTIMDYLDQRGIPVNATT 120

Query: 121 FSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE-- 180
           FSSLITACVRTKS+ DAKQIHAHIRINGLENNEFLRTRLVHMY+ACGSLEDAQKLFDE  
Sbjct: 121 FSSLITACVRTKSLGDAKQIHAHIRINGLENNEFLRTRLVHMYSACGSLEDAQKLFDESS 180

Query: 181 SSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSSKS+YPWNALLRGTVMAGRRDYRS+LSTYAEMRR+GVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSKSVYPWNALLRGTVMAGRRDYRSVLSTYAEMRRVGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFA 300
           QGLKAH LLIKNGLV +SILGT+LIDMYFKCGKIKLGRQVFEEITERDVVVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTSLIDMYFKCGKIKLGRQVFEEITERDVVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360
           HNRLQREALEYTR+MID GIRPNSVILTT+LPV+GE+WARRLGQE+HAYVIKTKSYSKQI
Sbjct: 301 HNRLQREALEYTRKMIDAGIRPNSVILTTVLPVLGEVWARRLGQEIHAYVIKTKSYSKQI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           FIQSALIDMYCKCGDIGSGRAVFY SMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 FIQSALIDMYCKCGDIGSGRAVFYGSMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCAELRAL+PGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAELRALKPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS 480

Query: 481 LKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEI 540
           LKLF+ MEQRNVILWTAMIDSYIENQ  HEAIGIFRAMQLSKHRPDTVTMARILY+CSE+
Sbjct: 481 LKLFDGMEQRNVILWTAMIDSYIENQRLHEAIGIFRAMQLSKHRPDTVTMARILYICSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAII 600
           K LK+GKEIHGQVLKR FESVHFVSAELVKLYG C AV+ AK VFEAIPVKGSMTWTA+I
Sbjct: 541 KRLKLGKEIHGQVLKRNFESVHFVSAELVKLYGNCGAVQTAKTVFEAIPVKGSMTWTAVI 600

Query: 601 EAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKI 660
           EA+G+NGEFQEA++LFDQMRS GISPNHFTFKVVLS+C +AGFVD+ALRIFKLM VRYKI
Sbjct: 601 EAHGDNGEFQEAVNLFDQMRSSGISPNHFTFKVVLSICNKAGFVDEALRIFKLMLVRYKI 660

Query: 661 KPSEEHYSLVIAILTRFGRIEEARR---MRKST 689
           KPSEEHYSL++A+LTRFGR+EEARR   MR S+
Sbjct: 661 KPSEEHYSLLVAVLTRFGRLEEARRYVEMRSSS 685

BLAST of ClCG08G001080 vs. ExPASy TrEMBL
Match: A0A6J1G986 (pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452099 PE=4 SV=1)

HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 599/684 (87.57%), Postives = 641/684 (93.71%), Query Frame = 0

Query: 1   MEISSSFILSLHLHPLPPNPL--AAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKF 60
           MEISSSF LSLHLHP PPNPL  A AA  SNSGH+LSRIK+ TQ+LTDTPP + K+V+KF
Sbjct: 1   MEISSSFTLSLHLHPFPPNPLAVAVAAANSNSGHRLSRIKTSTQTLTDTPPLRNKVVAKF 60

Query: 61  RKRNRPTFAEKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNA 120
           + R RP FAE+DAFP SLPLHTKNPHAIY+DIQRFARQNKLKEALTIMDYLDQ+GIPVNA
Sbjct: 61  QNRKRPVFAERDAFPESLPLHTKNPHAIYKDIQRFARQNKLKEALTIMDYLDQRGIPVNA 120

Query: 121 TTFSSLITACVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180
           TTFSSLITACVR KS+ +AKQ+HAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE
Sbjct: 121 TTFSSLITACVRAKSLANAKQVHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDE 180

Query: 181 SSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240
           SSS+S+YPWNALLRGTVMAGR+DYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT
Sbjct: 181 SSSRSVYPWNALLRGTVMAGRQDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALT 240

Query: 241 QGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFA 300
           QGLKAH LLIKNGLV +SILGTTLIDMYFKCGKIKL RQ+F+EITERD+VVWGS+IAGFA
Sbjct: 241 QGLKAHALLIKNGLVGSSILGTTLIDMYFKCGKIKLARQMFDEITERDIVVWGSMIAGFA 300

Query: 301 HNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQI 360
           HNRLQREALEYTRRMID GIRPNSVILT+ILPVIG++ ARRLGQEVHA+VIKTK+YS+ I
Sbjct: 301 HNRLQREALEYTRRMIDDGIRPNSVILTSILPVIGDVGARRLGQEVHAFVIKTKNYSRLI 360

Query: 361 FIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420
           +IQSALIDMYCKCGDIG GRAVFY S ERNAICWTALMSGYALNGRLEQAVRSVIWMQQE
Sbjct: 361 YIQSALIDMYCKCGDIGLGRAVFYGSKERNAICWTALMSGYALNGRLEQAVRSVIWMQQE 420

Query: 421 GFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYS 480
           GFRPDVVTVATILPVCA+LRAL+PGKEIHAYALKN FLPNVSIVSSLMVMYSKCGVMDYS
Sbjct: 421 GFRPDVVTVATILPVCAKLRALKPGKEIHAYALKNYFLPNVSIVSSLMVMYSKCGVMDYS 480

Query: 481 LKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEI 540
           LKLFN MEQRNVILWT MIDSYIENQC +EAI IFR MQLSKHRPDTVTM+RILYVCSE+
Sbjct: 481 LKLFNAMEQRNVILWTTMIDSYIENQCLYEAIDIFRVMQLSKHRPDTVTMSRILYVCSEL 540

Query: 541 KMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAII 600
           K+LKMGKEIHGQVLKR FESVHFVS+E+VKLYGKC A+KMAKMVFEA+PVKG+MTWTAII
Sbjct: 541 KLLKMGKEIHGQVLKRNFESVHFVSSEVVKLYGKCGALKMAKMVFEAVPVKGAMTWTAII 600

Query: 601 EAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKI 660
           EAYG NGE QEAI LFDQMRS G +PNHFTFKVVLSVC E GFVDDALRIFKLM+V YKI
Sbjct: 601 EAYGNNGELQEAIHLFDQMRSSGFTPNHFTFKVVLSVCNEGGFVDDALRIFKLMTVTYKI 660

Query: 661 KPSEEHYSLVIAILTRFGRIEEAR 683
           K SEEHYS VIAILTRFGRIEEA+
Sbjct: 661 KASEEHYSFVIAILTRFGRIEEAK 684

BLAST of ClCG08G001080 vs. TAIR 10
Match: AT1G71460.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 862.4 bits (2227), Expect = 2.4e-250
Identity = 419/678 (61.80%), Postives = 539/678 (79.50%), Query Frame = 0

Query: 8   ILSLHLHPLPPNPLAAAATISNSGHQLSRIKSPTQSLTDTPPSKFKIVSKFRKRNRPTFA 67
           + SL +  LP + L+   ++++  H+  +  +P +S     PS+ +  S    +    F 
Sbjct: 4   VSSLGIRDLPAS-LSVTTSLNHRPHRSDKDGAPAKS--PIRPSRTRRPSTSPAKKPKPFR 63

Query: 68  EKDAFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITA 127
           E+DAFPSSLPLH+KNP+ I+ DIQ FARQN L+ ALTI+DYL+Q+GIPVNATTFS+L+ A
Sbjct: 64  ERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEA 123

Query: 128 CVRTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPW 187
           CVR KS+   KQ+H HIRINGLE+NEFLRT+LVHMYTACGS++DAQK+FDES+S ++Y W
Sbjct: 124 CVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSW 183

Query: 188 NALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLL 247
           NALLRGTV++G++ Y+ +LST+ EMR LGV+LNVYS +N+ KSFAGASAL QGLK H L 
Sbjct: 184 NALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALA 243

Query: 248 IKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREAL 307
           IKNGL ++  L T+L+DMYFKCGK+ L R+VF+EI ERD+VVWG++IAG AHN+ Q EAL
Sbjct: 244 IKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEAL 303

Query: 308 EYTRRMI-DHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALID 367
              R MI +  I PNSVILTTILPV+G++ A +LG+EVHA+V+K+K+Y +Q F+ S LID
Sbjct: 304 GLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLID 363

Query: 368 MYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVT 427
           +YCKCGD+ SGR VFY S +RNAI WTALMSGYA NGR +QA+RS++WMQQEGFRPDVVT
Sbjct: 364 LYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVT 423

Query: 428 VATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNME 487
           +AT+LPVCAELRA++ GKEIH YALKN FLPNVS+V+SLMVMYSKCGV +Y ++LF+ +E
Sbjct: 424 IATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE 483

Query: 488 QRNVILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKE 547
           QRNV  WTAMID Y+EN      I +FR M LSKHRPD+VTM R+L VCS++K LK+GKE
Sbjct: 484 QRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKE 543

Query: 548 IHGQVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGE 607
           +HG +LK++FES+ FVSA ++K+YGKC  ++ A   F+A+ VKGS+TWTAIIEAYG N  
Sbjct: 544 LHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNEL 603

Query: 608 FQEAIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYS 667
           F++AI+ F+QM S G +PN FTF  VLS+C +AGFVD+A R F LM   Y ++PSEEHYS
Sbjct: 604 FRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYS 663

Query: 668 LVIAILTRFGRIEEARRM 685
           LVI +L R GR+EEA+R+
Sbjct: 664 LVIELLNRCGRVEEAQRL 678

BLAST of ClCG08G001080 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 360.9 bits (925), Expect = 2.3e-99
Identity = 192/595 (32.27%), Postives = 332/595 (55.80%), Query Frame = 0

Query: 90  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 149
           ++RF     L+ A+ ++    +  I  +  T  S++  C  +KS+ D K++   IR NG 
Sbjct: 68  LRRFCESGNLENAVKLLCVSGKWDI--DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF 127

Query: 150 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTY 209
             +  L ++L  MYT CG L++A ++FDE   +    WN L+     +G  D+   +  +
Sbjct: 128 VIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSG--DFSGSIGLF 187

Query: 210 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKC 269
            +M   GVE++ Y+F+ + KSF+   ++  G + HG ++K+G    + +G +L+  Y K 
Sbjct: 188 KKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKN 247

Query: 270 GKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTIL 329
            ++   R+VF+E+TERDV+ W SII G+  N L  + L    +M+  GI  +   + ++ 
Sbjct: 248 QRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVF 307

Query: 330 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 389
               +     LG+ VH+  +K   +S++    + L+DMY KCGD+ S +AVF    +R+ 
Sbjct: 308 AGCADSRLISLGRAVHSIGVKA-CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV 367

Query: 390 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAELRALRPGKEIHAY 449
           + +T++++GYA  G   +AV+    M++EG  PDV TV  +L  CA  R L  GK +H +
Sbjct: 368 VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW 427

Query: 450 ALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEA 509
             +N    ++ + ++LM MY+KCG M  +  +F+ M  +++I W  +I  Y +N   +EA
Sbjct: 428 IKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 487

Query: 510 IGIFR-AMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVK 569
           + +F   ++  +  PD  T+A +L  C+ +     G+EIHG +++  + S   V+  LV 
Sbjct: 488 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVD 547

Query: 570 LYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSCGISPNHFT 629
           +Y KC A+ +A M+F+ I  K  ++WT +I  YG +G  +EAI LF+QMR  GI  +  +
Sbjct: 548 MYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 607

Query: 630 FKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARR 684
           F  +L  C  +G VD+  R F +M    KI+P+ EHY+ ++ +L R G + +A R
Sbjct: 608 FVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYR 657

BLAST of ClCG08G001080 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 343.6 bits (880), Expect = 3.8e-94
Identity = 177/552 (32.07%), Postives = 309/552 (55.98%), Query Frame = 0

Query: 130 RTKSMTDAKQIHAHIRINGLENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNA 189
           R  S+ + +QI   +  NGL    F +T+LV ++   GS+++A ++F+   SK    ++ 
Sbjct: 46  RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105

Query: 190 LLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIK 249
           +L+G   A   D    L  +  MR   VE  VY+F  ++K     + L  G + HGLL+K
Sbjct: 106 MLKG--FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVK 165

Query: 250 NGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEY 309
           +G   +    T L +MY KC ++   R+VF+ + ERD+V W +I+AG++ N + R ALE 
Sbjct: 166 SGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEM 225

Query: 310 TRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYC 369
            + M +  ++P+ + + ++LP +  +    +G+E+H Y +++  +   + I +AL+DMY 
Sbjct: 226 VKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYA 285

Query: 370 KCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVAT 429
           KCG + + R +F   +ERN + W +++  Y  N   ++A+     M  EG +P  V+V  
Sbjct: 286 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMG 345

Query: 430 ILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRN 489
            L  CA+L  L  G+ IH  +++     NVS+V+SL+ MY KC  +D +  +F  ++ R 
Sbjct: 346 ALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRT 405

Query: 490 VILWTAMIDSYIENQCPHEAIGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHG 549
           ++ W AMI  + +N  P +A+  F  M+    +PDT T   ++   +E+ +    K IHG
Sbjct: 406 LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHG 465

Query: 550 QVLKRKFESVHFVSAELVKLYGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQE 609
            V++   +   FV+  LV +Y KC A+ +A+++F+ +  +   TW A+I+ YG +G  + 
Sbjct: 466 VVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKA 525

Query: 610 AIDLFDQMRSCGISPNHFTFKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVI 669
           A++LF++M+   I PN  TF  V+S C  +G V+  L+ F +M   Y I+ S +HY  ++
Sbjct: 526 ALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMV 585

Query: 670 AILTRFGRIEEA 682
            +L R GR+ EA
Sbjct: 586 DLLGRAGRLNEA 594

BLAST of ClCG08G001080 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 339.3 bits (869), Expect = 7.1e-93
Identity = 200/648 (30.86%), Postives = 336/648 (51.85%), Query Frame = 0

Query: 61  RNRPTFAEKD------AFPSSLPLHTKNPHAIYEDIQRFARQNKLKEALTIMDYLDQ--Q 120
           R  PT A +D        PS     +++P    + ++   R N L+EA  ++ Y+D    
Sbjct: 34  RATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLLREA--VLTYVDMIVL 93

Query: 121 GIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL-ENNEFLRTRLVHMYTACGSLED 180
           GI  +   F +L+ A    + M   KQIHAH+   G   ++  +   LV++Y  CG    
Sbjct: 94  GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 153

Query: 181 AQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSF 240
             K+FD  S ++   WN+L+  + +     +   L  +  M    VE + ++  +++ + 
Sbjct: 154 VYKVFDRISERNQVSWNSLI--SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC 213

Query: 241 AG---ASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKCGKIKLGRQVFEEITERDVV 300
           +       L  G + H   ++ G + NS +  TL+ MY K GK+   + +      RD+V
Sbjct: 214 SNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 273

Query: 301 VWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTILPVIGEIWARRLGQEVHAYV 360
            W ++++    N    EALEY R M+  G+ P+   ++++LP    +   R G+E+HAY 
Sbjct: 274 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 333

Query: 361 IKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQA 420
           +K  S  +  F+ SAL+DMYC C  + SGR VF    +R    W A+++GY+ N   ++A
Sbjct: 334 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 393

Query: 421 VRSVIWMQQE-GFRPDVVTVATILPVCAELRALRPGKEIHAYALKNCFLPNVSIVSSLMV 480
           +   I M++  G   +  T+A ++P C    A    + IH + +K     +  + ++LM 
Sbjct: 394 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 453

Query: 481 MYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEAIGIFRAMQ-----LSKH- 540
           MYS+ G +D ++++F  ME R+++ W  MI  Y+ ++   +A+ +   MQ     +SK  
Sbjct: 454 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 513

Query: 541 -----RPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVKLYGKCRAV 600
                +P+++T+  IL  C+ +  L  GKEIH   +K    +   V + LV +Y KC  +
Sbjct: 514 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 573

Query: 601 KMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQMRSCGISPNHFTFKVVLSVC 660
           +M++ VF+ IP K  +TW  II AYG +G  QEAIDL   M   G+ PN  TF  V + C
Sbjct: 574 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 633

Query: 661 KEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARRM 685
             +G VD+ LRIF +M   Y ++PS +HY+ V+ +L R GRI+EA ++
Sbjct: 634 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676

BLAST of ClCG08G001080 vs. TAIR 10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 329.3 bits (843), Expect = 7.4e-90
Identity = 177/599 (29.55%), Postives = 315/599 (52.59%), Query Frame = 0

Query: 90  IQRFARQNKLKEALTIMDYLDQQGIPVNATTFSSLITACVRTKSMTDAKQIHAHIRINGL 149
           I  F R   L +AL     +   G+  + +TF  L+ ACV  K+      +   +   G+
Sbjct: 110 ISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGM 169

Query: 150 ENNEFLRTRLVHMYTACGSLEDAQKLFDESSSKSIYPWNALLRGTVMAGRRDYRSILSTY 209
           + NEF+ + L+  Y   G ++   KLFD    K    WN +L G    G  D  S++  +
Sbjct: 170 DCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALD--SVIKGF 229

Query: 210 AEMRRLGVELNVYSFANIIKSFAGASALTQGLKAHGLLIKNGLVSNSILGTTLIDMYFKC 269
           + MR   +  N  +F  ++   A    +  G++ HGL++ +G+     +  +L+ MY KC
Sbjct: 230 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKC 289

Query: 270 GKIKLGRQVFEEITERDVVVWGSIIAGFAHNRLQREALEYTRRMIDHGIRPNSVILTTIL 329
           G+     ++F  ++  D V W  +I+G+  + L  E+L +   MI  G+ P+++  +++L
Sbjct: 290 GRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 349

Query: 330 PVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNA 389
           P + +       +++H Y+++  S S  IF+ SALID Y KC  +   + +F      + 
Sbjct: 350 PSVSKFENLEYCKQIHCYIMR-HSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 409

Query: 390 ICWTALMSGYALNGRLEQAVRSVIWMQQEGFRPDVVTVATILPVCAELRALRPGKEIHAY 449
           + +TA++SGY  NG    ++    W+ +    P+ +T+ +ILPV   L AL+ G+E+H +
Sbjct: 410 VVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGF 469

Query: 450 ALKNCFLPNVSIVSSLMVMYSKCGVMDYSLKLFNNMEQRNVILWTAMIDSYIENQCPHEA 509
            +K  F    +I  +++ MY+KCG M+ + ++F  + +R+++ W +MI    ++  P  A
Sbjct: 470 IIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 529

Query: 510 IGIFRAMQLSKHRPDTVTMARILYVCSEIKMLKMGKEIHGQVLKRKFESVHFVSAELVKL 569
           I IFR M +S    D V+++  L  C+ +     GK IHG ++K    S  +  + L+ +
Sbjct: 530 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 589

Query: 570 YGKCRAVKMAKMVFEAIPVKGSMTWTAIIEAYGENGEFQEAIDLFDQM-RSCGISPNHFT 629
           Y KC  +K A  VF+ +  K  ++W +II A G +G+ ++++ LF +M    GI P+  T
Sbjct: 590 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 649

Query: 630 FKVVLSVCKEAGFVDDALRIFKLMSVRYKIKPSEEHYSLVIAILTRFGRIEEARRMRKS 688
           F  ++S C   G VD+ +R F+ M+  Y I+P +EHY+ V+ +  R GR+ EA    KS
Sbjct: 650 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKS 705

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038889186.10.0e+0095.17pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Benincasa ... [more]
KAA0039287.10.0e+0092.40pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK00472... [more]
XP_008459588.10.0e+0092.24PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic ... [more]
XP_011656084.10.0e+0092.39pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Cucumis sa... [more]
XP_022141761.10.0e+0088.02pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Momordica ... [more]
Match NameE-valueIdentityDescription
Q9C9I33.4e-24961.80Pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Arabidop... [more]
Q9SN393.2e-9832.27Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
Q3E6Q15.3e-9332.07Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q7Y2111.0e-9130.86Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... [more]
Q9STE11.0e-8829.55Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7TCH10.0e+0092.40Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3CBS10.0e+0092.24pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucumis ... [more]
A0A0A0KXW00.0e+0092.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649310 PE=4 SV=1[more]
A0A6J1CK740.0e+0088.02pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Momordic... [more]
A0A6J1G9860.0e+0087.57pentatricopeptide repeat-containing protein At1g71460, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT1G71460.12.4e-25061.80Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT4G18750.12.3e-9932.27Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G11290.13.8e-9432.07Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G57430.17.1e-9330.86Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21300.17.4e-9029.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 388..434
e-value: 1.9E-7
score: 31.2
coord: 590..636
e-value: 2.2E-12
score: 47.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 492..525
e-value: 2.8E-5
score: 22.0
coord: 627..661
e-value: 7.5E-4
score: 17.5
coord: 593..625
e-value: 1.5E-10
score: 38.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 463..490
e-value: 0.13
score: 12.6
coord: 492..517
e-value: 0.0036
score: 17.4
coord: 260..286
e-value: 0.047
score: 13.9
coord: 288..318
e-value: 0.18
score: 12.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 105..150
e-value: 9.0E-4
score: 19.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 590..624
score: 12.715165
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 9.437737
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 286..320
score: 10.490022
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 388..422
score: 10.742131
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 562..698
e-value: 3.4E-24
score: 87.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 337..439
e-value: 2.0E-17
score: 65.1
coord: 241..335
e-value: 3.8E-17
score: 64.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 84..240
e-value: 1.6E-22
score: 82.3
coord: 440..561
e-value: 1.2E-17
score: 66.3
NoneNo IPR availablePANTHERPTHR24015:SF755PPR CONTAINING PLANT-LIKE PROTEINcoord: 44..685
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 44..685

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G001080.2ClCG08G001080.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009451 RNA modification
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding