ClCG08G000910 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG08G000910
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCytochrome c oxidase subunit 1
LocationCG_Chr08: 1871760 .. 1876254 (+)
RNA-Seq ExpressionClCG08G000910
SyntenyClCG08G000910
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGACTTGGGAGTGTTGAAATACTTCCCCGGGTTAGAGCTAGCTCGAAATAAACAACGATTTTTTGTGCTTTGGACATTATTTATGAAACATAGTTAGCATTGGCCGAAGGAAAAGTGTTGTTAGAAGATGTGGAGCAATATAGGCGTCTTGTAGGCTGTTTGATATATTTATCTGAGACTAGACCAGATCTTACCAATTGTTCGTTATTTTTTTCTTTTTTTTAAAAAAATATTTATTGTGATAGTCAGTCTGCATTGTATATTGTTCAAAATCCCGTATTTCATGAGAGGGCAAAACACATTGAAGCTGATTGTCACTTTGTGCGAGACGCTATGACAGCGGGCATTATTTCTCCTTCCTATGCACCTACAAGTTGCAATTGGGCGTTGGGGAAGAGTCAATTTGAATTTCTTTTAGGCAAGTTGGGCATTAGTGATCCTCATGCTCCAAACTTGAGGGGAGATATTGAGAGATCTTATTTAGGAAAATAGATTTTAGTCTTCCTTGCCATATATGTATTATGTAATATATTCTTGTATAGAGAAAGAGATGAAAGAATGAAGAAATAAATTTGTTGTTTTTCCTTGCTTTTTATGCCTCTTTTTTCTTAACCATATTCTAACTTTGATTTGTATTTTAATCTCTGTTTATAAAGGTTACGTTTAAAAGCCCTTCTTTAAATGGAAGTTGTTTTCACAATTTGAGACATTGTGGAGTTGAAAACAAAATTGGAGGAAGGAGATGATAGAGCTGCCGGTTTCTTCAAACACATTCTCCAATTTCAATTTCATAGACTGCCCCAATTCACAAAACCTATAGGGTTGACTAAAAACACAATAACTACAACCTAACTCCATTTGGACTCATCTTATTTCTCTTTATGTATATTTAATTCAATTCTAGTTATTCAAGGACACTCTTACTACTTATAAACTCTCTCTTTCCTTTTGTTTCATCTATTTATTTTTGTTATACATTTAACTCTTATCTTCCTCCTTCACCCTATGCAGTTTTGATTCATGATAAGCTCTTTATATCTCTCTTTCTACAATATATATTATATATGATATAAGTGTAAGTATTGAAGGTTTGAAATATCGATGTCGATGAAAATATCGAAGTCTTAATTTCACGAAATTTTCGATGGAAATATCGATAAAATGTTAATTTTGATGGATATTTCTGGAAAAATTATAAAACTACAAATTTTGAATTTTAAATTTAAATTAGTAAATAAAAACATAAAATTGATTCGCTCCTCATATCGATATTGAACCCATGGAAACATGAAAATATCGACATGTACACAGAACTTTAATATTGTGAGTAAGATTACTTTATTTTTTTCATATCCTATTCTTAGGTATATTATAGGATAAATTATAAAACATGTCATTAACTTTGTACTTGTGCGTCAAATTATTTTATGGTACCTTAAACAACTTTTAAAAAGAGTTTTTTTTTTTATGGAAATTGCTAGTATTTTATTTCAAAAATATTGTTTCATTAATTTAAAAAATACCCTTAAATTTAAAATAATAATAATAATAATAATACATTTACTTTTAGCATAGGAACAAAAATCATTAATACCTTGTCGCAAAAATATCTCTTTTAACTCTCAAAATTCTTTTAATGCTCTTACCACCTCAAAAGAAATTTAAAATGTTCTTATTGTTAGTATAGTGATCAATTTCTTTAAAATTATCTTAAGTTGGAAAAAAATCAATTTCAAATCAACTTATATAGATATCATCTTTTATTATATAAATACTTATACCAATTTTCTCAGCAAATCATATAAACAAAAACTTAAAGTTAAACCATAAAATTTCACAAAAAGGGCCAAATCATCTTTGATCAAGGTGAATCTTTCTTTATTACTCACAATAAATAGATTAATTTAAATTTTTTCAAAAAAAAAAAAAATCAATGGTCCTCGTCATTACAAGTTTGAGTAATGCATATGTTTTTTCTTCTTTTCTCTCCTACTAGTTGTCATCAAAATTATTATCCAAATCTTAATGTGTCTCTAATTTTCAATGCATCTCTCTTTGTGTATTAAACTCAAAAGATATATTAACATAGTCAACCTACTAACGTAGAACCTTGTTGAAACATGTAAGTCTTAAAGTTATTAGGTGGTTCCATTCTTCTTTCTTCTTACTGTAGCCTATGTACCCTTAATTGAATAGAGTAGGGTTTTTTTTTTTTTCTAATTTAGAGATAAACAATAGTCAAATAATTAACATAAAGTAACATAATCAATAAAAGAAGAGAACCAAGGGGCAGGAGAAACAAAGAATTGGAGTAGAGGGTATTGAAGAAGATGATGAAGAAAAAAAGAGGAAAAATAGAGAAAAATATTAGGTCATAGATGAAGTAAGGGTGGAAGGCAACTTAAAGAAGAGTTATATCTTTGGATGCATGAGTGAAACACACTCTATTTTTTGGATGACGTCATCTAGGTGCAATTGGTTGCGATAAACTTACAATAATATTATCAATATTAGATGCTAAATCAGCATTTGAATACCTGTGTGTACGTACTTTAAGCAGCATTTCCGTAGATAAGTTAGAGGCCCATGTAGTAACATGCAAATCATTACTAGATTGAATGAGTATCCCAAAATGCTTTGTCCCACTTAAGTACCAAAGAACTCATGCCAGTAAGTATCTTTAGGAAGACGAAGGAATTGACTAAGGTGATTCACTATATAAGCAATGTCAAGTCTTGTATTTTGTTTAATATTGTAGGGTTCCAATCATACTTATATGTAAACAAACGGATCTATTCAACATAGCTGATAATCCTCTCCCAATCTTCAGCCTTGGCCATAATTATTTTCCTCCCTTCAACTATCAAAACCTTTCTTAAATGACAAAACTAGGAAAATTATTTTAAATGACAAAACTACTAAAAATATTTACAAATAATAGCAAAATATCACTGTCTATCTGCAATAGACCGCGATAGACTACTACTATCCACAGATAGTATATCCACCCTTAAGTGGTATAAATAACCATTCTGGAGGAGCGCTTGATTTAGCAATTTCTTGTCTTCATCCATATGGTATTTCACCCATTTTAAGTTCTATCAATTTTATAACGACTATTTCCAACACCCTCTTTGTGTGGTTCGTTCTAGTGACAGCATTCTCACTTTTATTATCACTTCTGGTACTAGCAGGGGCTATTACCATGTTATTAACCGATTGAAACTTTAATACAACCTTTTTCTGATCCCGCTGGAGGGGGAGACCCCATATTATAACAGCATCTCTTTCTATTCTTCAATCATCCAGAGATGTATATTCTCATTCTGCTTGGATCTGGTATCATAAGTCATATCGTTTCAACTTTTTCGAGAAAATTGGTTTTCAGGTATCCAGGCTGGTTTATGCCATGATCAGTATCGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTGTGGGCTTTGACGTTGATACCCGTGCCTACTTCAACGTTGCTACCATGATCATAGCAACCCCCACTAGAATAAAAATCTTTAGTTGGATTGCTACCATGTGGGGCGGGTTTGATACAATACAAAACACCCATGGTATCTGCTGTAGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCTCGGCAAATTCAGGACTAGACATTACTCTACATGATACTTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCATTTTTGCTTTATTTGCAGGATTTCGCTATTGGGTGGGTAAAATCTTTAGTCGAACATACCCTGAAACTTTAGGTCAAATCCATTTTTAGATCACTTTTTTTCGGGTTAATTCGACCCTTCTTCCCATACATTTCTTAGGGCTTTCGAGTATGCCACATCACATTCCTAATTATCCAAATGCTTATGCTGGATGGAATACCCTTAGCAGTTTTTGCTCTTATATATCCATAGTTGGGATTCGCGTTTCTTCATGGTCGTAACAATCACTCCAAGCAGTGGAAATAACAAAAGATGTGCTCCAAGTCCTTAAGCCGTTGAATAGAATTCAACCACACTGGAATAGATGGTACAAAGTCCTCCGGCTTTTCATACTTTTGAAGAACTTCCAGCTATCAAGTGGGCGAAAACCTTTGTGAAGTAAAAGAATAAAGAGTCGTCGACTGCTACTAAGAACTTGACAGAACTGTTCAAAATGTAGGTTCTAAAACCACTTGTGTAGGTCGAGGTTGAAAATTGAAGGGTTAACAAAGCTAGGTCTATCATAGTCTATCACAATTACATAATAAAATTTTGCTATATATATAGTTCATTTTCTTATATTTGAAAACACCACATGTGGTGCTAAATTAAGAATCAAAACAGCATATACAAATAAAAATCTAAACCTTTTATTTCCATAATGTAATTCTTCTAGATTCCTTCATGAAACTTACTTTTCAATTAATGCTATCTTTGGTCTGAGACAAATACATTAG

mRNA sequence

ATGGAGGACTTGGGAGTGTTGAAATACTTCCCCGGGGGCTATTACCATGTATCCAGGCTGGTTTATGCCATGATCAGTATCGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTGTGGGCTTTGACGTTGATACCCGTGCCTACTTCAACGTTGCTACCATGATCATAGCAACCCCCACTAGAATAAAAATCTTTAGTTGGATTGCTACCATGTGGGGCGGGTTTGATACAATACAAAACACCCATGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCTCGGCAAATTCAGGACTAGACATTACTCTACATGATACTTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCATTTTTGCTTTATTTGCAGGATTTCGCTATTGGATCACTTTTTTTCGGGTTAATTCGACCCTTCTTCCCATACATTTCTTAGGGCTTTCGAGTATGCCACATCACATTCCTAATTATCCAAATGCTTATGCTGGATGGAATACCCTTAGCAGTTTTTGCTCTTATATATCCATAGTTGGGATTCGCGTTTCTTCATGGTCATTCCTTCATGAAACTTACTTTTCAATTAATGCTATCTTTGGTCTGAGACAAATACATTAG

Coding sequence (CDS)

ATGGAGGACTTGGGAGTGTTGAAATACTTCCCCGGGGGCTATTACCATGTATCCAGGCTGGTTTATGCCATGATCAGTATCGGTGTTCTTAGATTTCTTGTTTGGGCTCATCATATGTTTACTGTGGGCTTTGACGTTGATACCCGTGCCTACTTCAACGTTGCTACCATGATCATAGCAACCCCCACTAGAATAAAAATCTTTAGTTGGATTGCTACCATGTGGGGCGGGTTTGATACAATACAAAACACCCATGGGTCCATCTTTTTGTTCACCATAGGAGGACTCACTGGAATAGTCTCGGCAAATTCAGGACTAGACATTACTCTACATGATACTTATGTGGTTGCACATTTCCATTATGTACTTTCTATGGGAGCCATTTTTGCTTTATTTGCAGGATTTCGCTATTGGATCACTTTTTTTCGGGTTAATTCGACCCTTCTTCCCATACATTTCTTAGGGCTTTCGAGTATGCCACATCACATTCCTAATTATCCAAATGCTTATGCTGGATGGAATACCCTTAGCAGTTTTTGCTCTTATATATCCATAGTTGGGATTCGCGTTTCTTCATGGTCATTCCTTCATGAAACTTACTTTTCAATTAATGCTATCTTTGGTCTGAGACAAATACATTAG

Protein sequence

MEDLGVLKYFPGGYYHVSRLVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFDTIQNTHGSIFLFTIGGLTGIVSANSGLDITLHDTYVVAHFHYVLSMGAIFALFAGFRYWITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNTLSSFCSYISIVGIRVSSWSFLHETYFSINAIFGLRQIH
Homology
[Close]
BLAST of ClCG08G000910 vs. NCBI nr
Match: ABY66627.1 (cytochrome oxidase subunit I, partial [Echinocystis lobata])

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 240 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 299

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 300 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 359

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 360 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 419

[Close]
BLAST of ClCG08G000910 vs. NCBI nr
Match: YP_009913642.1 (cytochrome c oxidase subunit 1 [Luffa acutangula] >QLM02677.1 cytochrome c oxidase subunit 1 [Luffa acutangula])

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. NCBI nr
Match: ABY83868.1 (cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 255 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 314

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 315 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 374

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 375 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 434

[Close]
BLAST of ClCG08G000910 vs. NCBI nr
Match: ABY83874.1 (cytochrome oxidase subunit 1, partial [Neoachmandra indica])

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 273 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 332

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 333 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 392

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 393 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 452

[Close]
BLAST of ClCG08G000910 vs. NCBI nr
Match: ABY83917.1 (cytochrome oxidase subunit 1, partial [Luffa acutangula])

HSP 1 Score: 258.1 bits (658), Expect = 6.8e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 252 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 311

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 312 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 371

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 372 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 431

[Close]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match: P12786 (Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 5.8e-67
Identity = 138/194 (71.13%), Postives = 145/194 (74.74%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FHYWVGKIFGRTYPETLGKIHFWITFFGVNLTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match: P07506 (Cytochrome c oxidase subunit 1 OS=Glycine max OX=3847 GN=COX1 PE=3 SV=3)

HSP 1 Score: 255.0 bits (650), Expect = 7.6e-67
Identity = 138/194 (71.13%), Postives = 145/194 (74.74%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FHYWVGKIFGRTYPETLGQIHFWITFFGVNLTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match: P68540 (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-66
Identity = 137/194 (70.62%), Postives = 144/194 (74.23%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match: P08742 (Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-66
Identity = 137/194 (70.62%), Postives = 144/194 (74.23%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match: P14578 (Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 PE=3 SV=2)

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-66
Identity = 137/194 (70.62%), Postives = 144/194 (74.23%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match: B4XVS1 (Cytochrome c oxidase subunit 1 (Fragment) OS=Luffa acutangula OX=56866 GN=cox1 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 252 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 311

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 312 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 371

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 372 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 431

[Close]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match: A0A7D6J6S5 (Cytochrome c oxidase subunit 1 OS=Luffa acutangula OX=56866 GN=cox1 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

[Close]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match: A0A5A7UCF6 (Cytochrome c oxidase subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48743G00030 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 403 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 462

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 463 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 522

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 523 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 582

[Close]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match: B0FA80 (Cytochrome c oxidase subunit 1 (Fragment) OS=Echinocystis lobata OX=252533 GN=coxI PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 240 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 299

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 300 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 359

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 360 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 419

[Close]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match: G3EU24 (Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=cox1 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.3e-65
Identity = 139/194 (71.65%), Postives = 146/194 (75.26%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 276 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 335

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       GSIFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 336 QYKTPMLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 395

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 190
           F Y                   WITFF VN TL P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 396 FHYWVGKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYAGWNA 455

[Close]
BLAST of ClCG08G000910 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase )

HSP 1 Score: 250.4 bits (638), Expect = 1.3e-66
Identity = 136/193 (70.47%), Postives = 143/193 (74.09%), Query Frame = 0 

Query: 20  LVYAMISIGVLRFLVWAHHMFTVGFDVDTRAYFNVATMIIATPTRIKIFSWIATMWGGFD 79
           +VYAMISIGVL FLVWAHHMFTVG DVDTRAYF  ATMIIA PT IKIFSWIATMWGG  
Sbjct: 275 MVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSI 334

Query: 80  TIQN----THGSIFLFTIGGLTGIVSANSGLDITLHDT-YVVAHFHYVLSMGAIFALFAG 139
             +       G IFLFTIGGLTGIV ANSGLDI LHDT YVVAHFHYVLSMGA+FALFAG
Sbjct: 335 QYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAG 394

Query: 140 FRY-------------------WITFFRVNSTLLPIHFLGLSSMPHHIPNYPNAYAGWNT 189
           F Y                   WITFF VN T  P+HFLGLS MP  IP+YP+AYAGWN 
Sbjct: 395 FYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYAGWNA 454

The following BLAST results are available for this feature:
BLAST of ClCG08G000910 vs. NCBI nr
Match NameE-valueIdentityDescription
ABY66627.16.8e-6571.65cytochrome oxidase subunit I, partial [Echinocystis lobata][more]
YP_009913642.16.8e-6571.65cytochrome c oxidase subunit 1 [Luffa acutangula] >QLM02677.1 cytochrome c oxida... [more]
ABY83868.16.8e-6571.65cytochrome oxidase subunit 1, partial [Citrullus lanatus subsp. vulgaris][more]
ABY83874.16.8e-6571.65cytochrome oxidase subunit 1, partial [Neoachmandra indica][more]
ABY83917.16.8e-6571.65cytochrome oxidase subunit 1, partial [Luffa acutangula][more]
BLAST of ClCG08G000910 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P127865.8e-6771.13Cytochrome c oxidase subunit 1 OS=Pisum sativum OX=3888 GN=COX1 PE=3 SV=2[more]
P075067.6e-6771.13Cytochrome c oxidase subunit 1 OS=Glycine max OX=3847 GN=COX1 PE=3 SV=3[more]
P685403.8e-6670.62Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1[more]
P087423.8e-6670.62Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2[more]
P145783.8e-6670.62Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 ... [more]
BLAST of ClCG08G000910 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
B4XVS13.3e-6571.65Cytochrome c oxidase subunit 1 (Fragment) OS=Luffa acutangula OX=56866 GN=cox1 P... [more]
A0A7D6J6S53.3e-6571.65Cytochrome c oxidase subunit 1 OS=Luffa acutangula OX=56866 GN=cox1 PE=3 SV=1[more]
A0A5A7UCF63.3e-6571.65Cytochrome c oxidase subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
B0FA803.3e-6571.65Cytochrome c oxidase subunit 1 (Fragment) OS=Echinocystis lobata OX=252533 GN=co... [more]
G3EU243.3e-6571.65Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=cox1 PE=... [more]
BLAST of ClCG08G000910 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG01360.11.3e-6670.47cytochrome oxidase [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000883Cytochrome c oxidase subunit IPRINTSPR01165CYCOXIDASEIcoord: 110..129
score: 69.16
coord: 28..43
score: 77.13
coord: 52..73
score: 68.79
IPR000883Cytochrome c oxidase subunit IPFAMPF00115COX1coord: 20..180
e-value: 1.7E-32
score: 112.9
IPR000883Cytochrome c oxidase subunit IPANTHERPTHR10422CYTOCHROME C OXIDASE SUBUNIT 1coord: 16..198
IPR036927Cytochrome c oxidase-like, subunit I superfamilyGENE3D1.20.210.10coord: 14..205
e-value: 9.4E-50
score: 171.4
IPR036927Cytochrome c oxidase-like, subunit I superfamilySUPERFAMILY81442Cytochrome c oxidase subunit I-likecoord: 13..196
NoneNo IPR availablePANTHERPTHR10422:SF18CYTOCHROME C OXIDASE SUBUNIT 1coord: 16..198
IPR023616Cytochrome c oxidase-like, subunit I domainPROSITEPS50855COX1coord: 20..213
score: 29.940989

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG08G000910.1ClCG08G000910.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0070469 respirasome
molecular_function GO:0004129 cytochrome-c oxidase activity
molecular_function GO:0020037 heme binding