ClCG08G000630 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G000630
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	LysM domain-containing protein
Location	CG_Chr08: 1488814 .. 1493438 (+)
RNA-Seq Expression	ClCG08G000630
Synteny	ClCG08G000630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTTTAATTCTCAGGTATTTCGCTATTCCCTTAAAATCTCTTAACCCATTACTCATACCATACCCTTTCTTTTTGTTTGAAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGGTATGTTTGCTCTCCATTGAAACCTGGGTTCACTTCTGTACCTTTTCTGCTCTGTTTGATTTCAGAAAAGAAAACTTTGGAGAAGATCTTCCACCGAAATCTCAACTCTATCGTGCTCTTGGTTCTAATTAGTTCATCCCCATGTTTGAATTGTTAGCTAAATTCTGCCTCTGTGTTCCTTTGTTTTATCACTGACCCAGATATTGATTAGTGATTTATGGTTTGAATTTCTTTTGAATCCACTTTTAGAAGATGTTTTGGGATTATAAAGAATGAGTTAGTGATTAATTGTTAAGTATTTTTCTTATAAGTTCTGTGTTGACTTTGGCAGAGATGGAGGTTTCAGCTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGTAAGAGGAAATTGTAATATTATTCACTCTGCTTTTCTTCTTATAAGAATTTGATGGTATCTGAAATTTGTATTTTCCAGCCTCAATGACTTAGGTTTTCTGGAATGAAAAAGGGGTTTTGTGGGCTTACTAGCTTTAAAAGTGCCTCTCTTCTGTTAGAACATAAAGTGTAGGTTTGTGAGTGATATTGAAATTGTTAAAATTACTTCATAATACGCCTTTAACCACTCAAAATCAATTTACCGTTTAATTTTGCACTTTTATATGCAATTTTCATACCATCAAAATTGTTATAGATTAGAGTTGTTTCTAGTTCCACAGCGAGTTATCAACTGAAGTTGTTGCTAGTAATTGGATTCTGCACTCCTGTTGTCAATATAATGATATGCTGTTCAATATATTAAATTATTCTGAGAAATTTTCCTTATTCAAAGTTTCAAATCAATCATATGGGCAATCGCACAGTTAAAATGAGTTAGTACTTCAGGAAATTCAGTTGAATTTCTGAATTATTACAGTTTCATCTGAGTGTTAAGATGTCAATTGGTAGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGGTAAGCAACCTTGTACTTCCTTCCCACTTTCAAGTGATGTTCTAAACTCTTCTGCAGGATAATTTTGTAACTTTCATTTCTGTGGTTTCTACTTCTAGCTTCTTGTTGAATTACTTCAGAAAGAAATTGATAGCTCAAAACTTCTGATACCAATCATTTCCTAAGCAATTGATTATGTTTTGATTCTAAACTTTGATTGCATCGTTGGTTATGTATTATAAATGATGATTACTTTTCGAATATAATTTTTCTTTGCAATCTATTTATAATGGCTGCTGTAGGAAAATTTGTAAGATAGCTGCAAACTAATTACTGAATGTTAGATCTTCCCAACAAAATTGATGTAAAGAAGCAAATCCTATGTGGTCATTAGCACATGACCACAAAGCCTGTAGTTCAAATCCCATACGAGTGTACTAATGACTACAAGGCTTGTGGTTCAGATTAAAAGAAGTACAAGCTTGCTTATTGCATGGTTGGTTATGTATTACAATGATGATTACTTTTGGAATATAATTTTTCTTTGCAACCTATCACAATCGATTTAAAATCAGATTTTCACGAGCTGGGTTCATAGTTTCTAAACTTTGTGATCTTTGAAGAATTGACAAAATCACTTGAACCATACTAAACTGCAATTTGTGCTCGTCACAATTGGATGTAAAGAAAGAAATCACAATCATGAGAGTTTTAGAACCATCATGTTTGATTGTGATACTGCACCAGGTTGTGAGACTAGCTAGCGTTTGAAATATTGCTGGCTTTGGTCAATCACTTGGCAATATTTCCATGTGAAGCTAGGGGAGGAGAGGTAATCCCGGCAGGCATATGAAAAAATGCCTAATAAATATCCATTTTGTTAGACCAAGTTTAGACATGATTACAAATTTGTGCTTAAGTACCCTTCTAAAATACTTCTCCTAAAATACTTCTAGCACCATCTTCAACTTGGTTAAAGCTTTATTGTAGGGGCCAAAGTTGATACTGCACCAAGTTGTGAGACTAGCTAGCATTTGCAATATTGCTGGTTTTAGTCAATCACTTGACTATATTTCCTTGTCAAGCTAGGGGAGGAGAGGTAATCCTTGCAGGCATATGAAAAAATGCCTAATAAATATCCAATTTGTTAGACTAAGTTTGGACATGATTACAAATTTGTGCTCAAGTACCCTCCTAAAATACTTCCACCACCATCTTCAACTTGGTTAAAGTTTTATTGTAGGGGCAAAGCAAGCATAACTCAATTGGTATACAAGTGTGCTTATGGCCACGAGGTCTGTGGTTCAAATTCTCCTTCTCCCAATTGTAGTAAAAATACAAGTCTTTTTGTAGGGGGGACTGTCCAGGTTCTGTCCAGGTTCTAGTTTGTAGATTTTGAGGGATTTAGAGTGAGTTGTTGAAGAGAAAACTCTAGTTGAATTTGAGCTCGGTATCCATGTGATTTGTTATGTACTTGAGCTACACATTAGAGGATTTTTTGCATATCCATATATGGTCACATATATGATTCGCTATCTATCTGGCAGGAATGTGTCCGGAGTAGTTGAGGACATTGTCGTCAGTTCAAGATTGAATTACTCTATAATCTATTCTTGTTCGTGGCTTCTTTCTTATATAATCACTGCAGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAACCTCCTCTCGTCTACCTCCTGTAAGTTTTTCTCACCAGAAGTAATTATATTCTTTCATTTAGAGCTTGTCTAGCCTAAACATGTCATCCCTACGTACTTATTTGGATACTTCTTTGACATTTATCTAGAAGTGACAATTCAACGAACTTATTTGTTCTCTTTTCACTTTTTTCTCTCTGTCAGGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAACGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTGTAAGTAATGTAACTTTATGCTCCTACTTTTACCTAATTCACCTTTACATGATTTTGTTTTTCTTTAGAGTGTTTTCTTGAGCATGGTGTTATTAGATTTCTTTAACTGGGGCAGAGGTAATACTTGCAATGAGAAATGGGAGCAAAATTGACTACTACTAAAGTTGTTGAATTGTAGCTTTCATTTCTTTGAGCACCCAACTCACCAAGCCTTTTCCAACTAATCATTCATTTTTGTCTATTCCTAATGGAGTTCTCTGGCCATCCACTTCCCTTTCTTCTGGTTGGCCTCATCTTTTTGTTTCAACAAGATGATAATACTGCCAAAATGGTAAACTATCTTCAGATAACAACATTGGATTTCCACATGGGTGTGATAGGAACCGAATATGTTGAATTATAATTGATAAAGAAAATACAAGATAAACTAAGTGATCAAGACCTTCCCAATTTCAAGGCCTAATTCACTCAAAATATTGCTTATCTTCCTCCTTCCCTATTGAAGGTATTTATAGCCAACCAATTCAATATACAATATCTGAATCTTAAGCATCTTGGAGAACCACACCCCAAAAGCTAGCTAATGAGGTGGGAGAGCCAAATCACTTAAGTACTATATTGGTCATCCCATTCTAACCAATGTGGGCAAAAGTAGCCCATACTACCTTGGTTCCTAACATATCCCTCTAATACTATTCCTATCAGGGTGGTTTTGGTACAAAGCAAAAATATGTTAAGCTTCGTTTCTAAACAATACCCTTAAAATTATTCTAAACTCAGCTGAACATGTTTCATATAAGAAAAACGTGGCTATGTAATCTTGCTCTGTTCCAGATTAGTAGAGGGAGGGAGAGAGCTGCACGTATTAGCTTGATTCAAGCTTTGGGAGTCTTCATTTGTCTTCTAGTTTCCATTCTAGCCAAAAGTTCGCAATTTGGTAATAGTTTATAGTTATTGTTTTGCAGAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

mRNA sequence

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTTTAATTCTCAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGAGATGGAGGTTTCAGCTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAACCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAACGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

Coding sequence (CDS)

ATGGCAATGGCCAATTTCAACGGTTTCTGTGATGGAAGTGAAGCTCAGCCAGAGAAACAGAGCACACCGTTTTTCTCTCCTCCCCAAGTTGCTTCCACACCCAACGCTCCCTTCTTTAATTCTCAGAAACTTACACAACTTGCTTTGCTTTTGTGCTTTTTCCCCTCCAATTTCTACCCCAGAGATTGGGCCACCACCACATTCAAGAATCAAGTCAGAGCCGTTACTCTGAGATGGAGGTTTCAGCTTCAGGATATATCCAAAGATCAACTCTCCGCCAAGCACCACTATGTTCATATTGTAGAAGGGAGCGAGAGCTTGACCTCAATTTCAGATCAGAATGGAGATCCTGCACATTCCATTGTCATAGCTAATAAGAAGATAATGGACACGGATCTAGAACAAAAAGGGCAGAATATCAAGATTCAAAACCCTCGAGCGATTACAGATGTATATCAATTAGAAGAAAAGCTTCAAAGTGCTTTGAATGGACTTCGAAACTATAAGAAGCTTTCCGCACTAACCTCCTCTCGTCTACCTCCTGCTAGAACCACTAGTTTTATAGTTTTGGTTCCTCTTATAGTATTTTGTGCCAGATGCATAATTGGTGCCTCTTATGCTAGAGTTTTCGAAACATCGAGGCTTGAAACTGTTGATAAACGAGAAGGAGAACGTCACAAGTTCAGAAACGGGCACTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTGGATTGTGAGTCCCCCATAGATTCTACTAGTCCTTCAGAAGATGAACAGATCTCAGTTGAAGATTTATCACATGCTTACAAGAAACTGGATCAGGATTACCAAAAATTTCTATCAGAATGTGGACTGAGTAAATGGGGCTACTGGCGTGGGGGTACCCGGAGAGACTTGAACAGGAATGAATAG

Protein sequence

MAMANFNGFCDGSEAQPEKQSTPFFSPPQVASTPNAPFFNSQKLTQLALLLCFFPSNFYPRDWATTTFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALTSSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWRGGTRRDLNRNE

Homology

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BLAST of ClCG08G000630 vs. NCBI nr
Match: XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])

HSP 1 Score: 414.5 bits (1064), Expect = 8.2e-112
Identity = 210/248 (84.68%), Postives = 222/248 (89.52%), Query Frame = 0


Query: 55  PSNFYPRDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISD 114
           PS  + R+WA T  + KNQ RA+TLRWRFQLQDISK+QLS KHH VHIVEGSESLT   +
Sbjct: 27  PSLTHHRNWANTRKSLKNQFRAITLRWRFQLQDISKNQLSTKHHLVHIVEGSESLTLNPN 86

Query: 115 QNGDPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLS 174
           QNGDP HSI +ANK+I DTDLEQKGQNIKIQNPRAI DVYQLEEKLQSALN LRNYKKL 
Sbjct: 87  QNGDPTHSISVANKRIKDTDLEQKGQNIKIQNPRAIRDVYQLEEKLQSALNELRNYKKLF 146

Query: 175 ALTSSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGH 234
           AL SS LPPARTTSFIVLVPLIVFCARCIIGASYARVF TSRLETVDKREG+ HKFR+GH
Sbjct: 147 ALASSHLPPARTTSFIVLVPLIVFCARCIIGASYARVFGTSRLETVDKREGKHHKFRSGH 206

Query: 235 WRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWG 294
           WRSALRDIRELDGLDCESPIDS SPSEDEQIS EDLSH YKKLDQDY+KFLSECGLSKWG
Sbjct: 207 WRSALRDIRELDGLDCESPIDSMSPSEDEQISDEDLSHDYKKLDQDYEKFLSECGLSKWG 266

Query: 295 YWRGGTRR 301
           YWRGGT+R
Sbjct: 267 YWRGGTQR 274

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BLAST of ClCG08G000630 vs. NCBI nr
Match: KAA0039254.1 (uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00440.1 uncharacterized protein E5676_scaffold169G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 391.3 bits (1004), Expect = 7.4e-105
Identity = 193/245 (78.78%), Postives = 221/245 (90.20%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALT 180
           +SIVI NKKI+DTDLEQKGQNIKIQN RA++   D +QLEEKLQSALNGL+ YKKL AL 
Sbjct: 90  NSIVIDNKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEEKLQSALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFR+GHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPS DEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of ClCG08G000630 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 391.3 bits (1004), Expect = 7.4e-105
Identity = 192/245 (78.37%), Postives = 221/245 (90.20%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALT 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL AL 
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFR+GHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of ClCG08G000630 vs. NCBI nr
Match: XP_011656102.1 (uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hypothetical protein Csa_009213 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 6.9e-103
Identity = 194/245 (79.18%), Postives = 216/245 (88.16%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG+ESLTS S+QNGDP 
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGNESLTSTSNQNGDPP 90

Query: 122 HSIVIANKKIMDTDLEQKGQNIKIQNP---RAITDVYQLEEKLQSALNGLRNYKKLSALT 181
           HSIV+ANKKIMDTDLEQK QNIKIQNP   R I + +QLEEKLQSALNGLR YKKL AL 
Sbjct: 91  HSIVMANKKIMDTDLEQKRQNIKIQNPREVRKIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFR+GHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of ClCG08G000630 vs. NCBI nr
Match: XP_011656104.1 (uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 6.9e-103
Identity = 194/245 (79.18%), Postives = 216/245 (88.16%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEG---SESLTSISDQNG 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG   +ESLTS S+QNG
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGYGRNESLTSTSNQNG 90

Query: 122 DPAHSIVIANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALT 181
           DP HSIV+ANKKIMDTDLEQK QNIKIQNPR I + +QLEEKLQSALNGLR YKKL AL 
Sbjct: 91  DPPHSIVMANKKIMDTDLEQKRQNIKIQNPREIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFR+GHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of ClCG08G000630 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.6e-105
Identity = 193/245 (78.78%), Postives = 221/245 (90.20%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALT 180
           +SIVI NKKI+DTDLEQKGQNIKIQN RA++   D +QLEEKLQSALNGL+ YKKL AL 
Sbjct: 90  NSIVIDNKKIVDTDLEQKGQNIKIQNSRAVSKIRDAFQLEEKLQSALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFR+GHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPS DEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSADEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of ClCG08G000630 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 3.6e-105
Identity = 192/245 (78.37%), Postives = 221/245 (90.20%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALT 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL AL 
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 240
           SSRLPPARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHKFR+GHWRS
Sbjct: 150 SSRLPPARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHKFRSGHWRS 209

Query: 241 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 300
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 210 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECGLSKWGYWR 269

[Close]

BLAST of ClCG08G000630 vs. ExPASy TrEMBL
Match: A0A0A0KSX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 3.4e-103
Identity = 194/245 (79.18%), Postives = 216/245 (88.16%), Query Frame = 0


Query: 62  DWATT--TFKNQVRAVTLRWRFQ-LQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 121
           +WA T  +F NQ+R + LRWRFQ L DISK QLS KHH+VHI+EG+ESLTS S+QNGDP 
Sbjct: 31  NWANTKKSFNNQLRGIALRWRFQLLADISKHQLSTKHHFVHILEGNESLTSTSNQNGDPP 90

Query: 122 HSIVIANKKIMDTDLEQKGQNIKIQNP---RAITDVYQLEEKLQSALNGLRNYKKLSALT 181
           HSIV+ANKKIMDTDLEQK QNIKIQNP   R I + +QLEEKLQSALNGLR YKKL AL 
Sbjct: 91  HSIVMANKKIMDTDLEQKRQNIKIQNPREVRKIRNAFQLEEKLQSALNGLRIYKKLFALA 150

Query: 182 SSRLPPARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRS 241
           SS  PPARTTSFIVLVPL++FCARCIIGASYAR F T +L+ +DK+EGER KFR+GHWRS
Sbjct: 151 SSHQPPARTTSFIVLVPLVIFCARCIIGASYARAFGTLKLKAIDKQEGERRKFRSGHWRS 210

Query: 242 ALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWR 301
           ALRDIRELDGLDCE+PIDSTSPSEDEQISVE+LSHAYKKLDQDY+KFLSECGLSKWGYWR
Sbjct: 211 ALRDIRELDGLDCEAPIDSTSPSEDEQISVEELSHAYKKLDQDYEKFLSECGLSKWGYWR 270

[Close]

BLAST of ClCG08G000630 vs. ExPASy TrEMBL
Match: A0A1S3CB50 (uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 5.7e-103
Identity = 192/253 (75.89%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 61  RDWATT--TFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPA 120
           R+WA T  +F NQ+R ++LRWRFQL D+SK QLS KHH+VHI+EG+ESL SIS++NGDP 
Sbjct: 30  RNWANTKKSFNNQLRGISLRWRFQLLDVSKHQLSTKHHFVHILEGNESLASISNKNGDPP 89

Query: 121 HSIVIANKKIMDTDLEQKGQNIKIQNPRAIT---DVYQLEEKLQSALNGLRNYKKLSALT 180
           +SIVI NKKI+DTD EQKGQNIKIQNPR ++   D +QLEEKLQ+ALNGL+ YKKL AL 
Sbjct: 90  NSIVIDNKKIVDTDPEQKGQNIKIQNPRVVSKIRDAFQLEEKLQNALNGLQIYKKLFALA 149

Query: 181 SSRLPP--------ARTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHK 240
           SSRLPP        ARTTSFIVLVPL++FC RCIIGASYARVF T +L+ ++K+EGERHK
Sbjct: 150 SSRLPPVNFFFSPEARTTSFIVLVPLVIFCTRCIIGASYARVFGTLKLKAINKQEGERHK 209

Query: 241 FRNGHWRSALRDIRELDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECG 300
           FR+GHWRSALRDIRELDGLDCE+PIDSTSPSEDEQISVEDLSHAYKKLDQDY+KFLSECG
Sbjct: 210 FRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQISVEDLSHAYKKLDQDYEKFLSECG 269

[Close]

BLAST of ClCG08G000630 vs. ExPASy TrEMBL
Match: A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.5e-90
Identity = 178/240 (74.17%), Postives = 196/240 (81.67%), Query Frame = 0


Query: 63  WATTTFKNQVRAVTLRWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNGDPAHSIV 122
           +A  + KNQ  AV LRWRFQLQDI +DQ   KHH+V IVEG E+ TSI  QNG   HSIV
Sbjct: 36  YAKRSSKNQFGAVALRWRFQLQDIPRDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIV 95

Query: 123 IANKKIMDTDLEQKGQNIKIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALTSSRLPPA 182
           I N+KI DTDLE KGQ+ KI+NP AI DVYQL+EKLQS+LNGL+NYKKL    S RLPPA
Sbjct: 96  IVNRKIGDTDLEHKGQDSKIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPA 155

Query: 183 RTTSFIVLVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRSALRDIRE 242
           RTTSFIVLVPLIVFCARCIIGASYARV +TS+L+T+DK EGE HKFR+GHWRSALRDIRE
Sbjct: 156 RTTSFIVLVPLIVFCARCIIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRE 215

Query: 243 LDGLDCESPID---STSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSKWGYWRGGTR 300
           LDGLD ES  D   S SPS DEQISVEDLSHAYKKLD+DY+KFLSECGLS  GYWRG  R
Sbjct: 216 LDGLDSESSTDPSVSNSPSVDEQISVEDLSHAYKKLDKDYEKFLSECGLSNCGYWRGVPR 275

[Close]

BLAST of ClCG08G000630 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-10
Identity = 57/230 (24.78%), Postives = 104/230 (45.22%), Query Frame = 0


Query: 78  RWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNG----DPAHSIVIANKKIMDTDL 137
           R RF +Q +S+++   KH      + SESL  I  Q G    +P  S    + ++ D D 
Sbjct: 35  RCRFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSSRLDDLDC 94

Query: 138 EQKGQNI---------KIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALTSSRLPPART 197
           E+K   +         K+     + D+ ++E+  ++    +     LS      LP   T
Sbjct: 95  EEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQILPHLNT 154

Query: 198 TSFIV-LVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRSALRDIRE- 257
              +  L+P++ FC  CIIG  +           + ++  + H   +  WR+AL D  E 
Sbjct: 155 GVLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEP 214

Query: 258 --LDGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSK 291
              DG D  SP    + +  E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 215 LASDGHDSMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

[Close]

BLAST of ClCG08G000630 vs. TAIR 10
Match: AT4G09970.2 (unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-09
Identity = 56/227 (24.67%), Postives = 102/227 (44.93%), Query Frame = 0


Query: 78  RWRFQLQDISKDQLSAKHHYVHIVEGSESLTSISDQNG----DPAHSIVIANKKIMDTDL 137
           +W F +Q +S+++   KH      + SESL  I  Q G    +P  S    + ++ D D 
Sbjct: 4   KW-FCVQQMSENEQRTKHELARSAKRSESLRRILKQYGVSVENPEES--KTSSRLDDLDC 63

Query: 138 EQKGQNI---------KIQNPRAITDVYQLEEKLQSALNGLRNYKKLSALTSSRLPPART 197
           E+K   +         K+     + D+ ++E+  ++    +     LS      LP   T
Sbjct: 64  EEKHDAVTSSVIDDDSKMNTTEELPDLRRVEKYTET----VGTADNLSGQNHQILPHLNT 123

Query: 198 TSFIV-LVPLIVFCARCIIGASYARVFETSRLETVDKREGERHKFRNGHWRSALRDIREL 257
              +  L+P++ FC  CIIG  +           + ++  + H   +  WR+AL D  E 
Sbjct: 124 GVLLTSLLPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEP 183

Query: 258 DGLDCESPIDSTSPSEDEQISVEDLSHAYKKLDQDYQKFLSECGLSK 291
              D     DS SP   E  + ++++ AY +++ +Y++FL ECG+ +
Sbjct: 184 LASDGH---DSMSPEYREATATDEMNEAYSRVELEYKRFLLECGVGE 211

The following BLAST results are available for this feature:

BLAST of ClCG08G000630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890844.1	8.2e-112	84.68	uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida]	[more]
KAA0039254.1	7.4e-105	78.78	uncharacterized protein E6C27_scaffold64G00450 [Cucumis melo var. makuwa] >TYK00...	[more]
XP_008459633.1	7.4e-105	78.37	PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo]	[more]
XP_011656102.1	6.9e-103	79.18	uncharacterized protein LOC101208955 isoform X2 [Cucumis sativus] >KGN52688.1 hy...	[more]
XP_011656104.1	6.9e-103	79.18	uncharacterized protein LOC101208955 isoform X3 [Cucumis sativus]	[more]

BLAST of ClCG08G000630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG08G000630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T6Z4	3.6e-105	78.78	LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3CBV5	3.6e-105	78.37	uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KSX5	3.4e-103	79.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650530 PE=4 SV=1	[more]
A0A1S3CB50	5.7e-103	75.89	uncharacterized protein LOC103498697 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1CKQ6	2.5e-90	74.17	uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of ClCG08G000630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09970.1	2.5e-10	24.78	unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP...	[more]
AT4G09970.2	4.8e-09	24.67	unknown protein; Has 13 Blast hits to 13 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 265..285
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 97..142 score: 9.426481

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G000630.1	ClCG08G000630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane