ClCG08G000410 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG08G000410
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Mads-box transcription factor
Location	CG_Chr08: 1179583 .. 1189210 (-)
RNA-Seq Expression	ClCG08G000410
Synteny	ClCG08G000410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAGCAAAAGAGGGGTTGATGCAAAATTAAAATTAAAAGGATTAGTGTGTGGGTATTAGGTAGATTTTGCATTAAGTAAATGAAAAGAAATTGTGAAGAAGGAGAGAAAGGGGCAAAAAGGTAAAATAAAAAAAATGAAAGGGAAAGAAAAAAGTAAAGGAAAGTATTGCTGATTTTGGTGGGAATTTGGAAATGCAGAGAAGTTTTAATTCAGCTATAACTCCAATGTCTTGTATCAGTTTCAGGCAAACTCCCACTTTCTCTCTCTCTTTTCTAAAATATATTGACAGATTTCCATTCAGATTTTGTATTTTTGAGATTTGCTTACTAAAGAAGCTTCATTTTTCTTCTACCTTTCTTAATTTTATTGGAAAATTCATCTCAAACCCTCCATTTCTCTAAGGTTTGTTTTCTTTCTTCATCATTTCTTCAAACCCCTCTAACCAAAAATTAAACCCTTTTCCCATTTTTGTTCATCATTTAGATCTATCTGTTCAACCCATACAACTAAAATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTGCATTCTTTTGGGTACCCATTTCTCATGTTTTGATTCCTTCAATATTTTTTTTTTTTTTTGAGTTGAAACAATATAAATATGATTGTGTGTATCGTATTTTATGTAGTTGTTGGGTTGTATATAAATTAAAATAATGAATATTTTTCAGGAAGATATCAAAAGATCAGTAGAGAAGATCGATGGGGAGAGGAAAGATTGAAATAAAGAGAATAGAAAACACAACAAATCGACAAGTGACATTCTGCAAGAGAAGAAATGGACTTTTGAAGAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGGTTAGGTTTGGTTTTTTTTTTTTTTTTTCCTTTTTCTTTTCTTTTTCTTTCGTTCTCCGATCCGTGCAACATTTGAACCTCTAACCTTTTAACTACCGAACCACCCAAAGTGAGGTGAAAGTAGCATGTAATTGCATCAACACTATATTGTGTTTATTACATGTGTTTTCTTTTCTCTTTTAACAACAATACATTATATTTAACCTTCTTTAAATTGGAAGTTGCATTGTGGCCGTCACCTCAAGTTTTTTTACTTTTAAATTTGTTAATAAAAGGATTTCTAAACTTATTCTCAACTTTTAAGAAATTTGATTCCCCAAAATTTAAAAAAAAAAAAAAAAAAAGTTTAAAACGCGATCATATAACCCTAAACATTCATTTAAGTGTCTAGTAGATCTATGAATTTTTAAGAAAATTGTTTAGACACACAATTGAAAATCCAAGGACATATTATATTGACACAAAAGTTGAAATTCCAAGAACAAATTAAAAGTTAATTACAAATTGAATAGACTCACTAACACTTGAAATTCACTTTCAAAAGAGGTTGTTTGGAATGGACTAAATTTGTAATGGTTATTCCTAGAGAAAGATGAAGAAAGAATATGGTAGAAGTATGAAAAGAATGGGCATATGACAACCAAAATCCCAATATTGATTGTTGGATAAATATTAAAAAAAAAGTGTGGCTTCCTTGTATAGTTAGATTTATGAGGCATGAGCTGTTTTTGATGAAAATTTTAGTATAAAAATGTCAATCTTTTTCCAACAGTGAAAGAACTGTTCATGGAACATTAAAAAGGAATAAAAACAAAACAACCTCTTCCCACTTCAAACTCAATGTTCCCTTCATTTCTAGGGTTTCAACTTCCAACTTGGTCCAACCTTGAAAAATTAAAAATCAATTATTCACAATTTTATGAATATATATATTTTGTCCTCGCATTTAGTTGTTTAAGTTTTGAGTTTGATTTTAATTTAGTTTTTAAGTTTTAAAATGTCACAATTTTACCTTTGAAGTTTGGAAATTTTGTTCAATTTTGGTCCTTAAATTTTAAGATTTATACTTTTAATCATGGTTTTCTTTTTTTCATTTTTTACTAAATACTCATTTAAGTCTTGGTGTTAATGTCTATTAATTAATTAAAAAAATTAAAGAATTATATTAATTAAATTTCACAACTTTTTTTCATCGCATTTAAAACTTTACTTCATAATTATCTTAAATTAATTAATAGTTAAAAATCAAAGTTAAAAGTATAAATCTTGAAACGTATGGACCAAATTGAAACAAAAATTGAAATCTCAAGGGTAAAATTGTAACATTTGAAACTTAATGACTAAATTGAAATGAAAATCAAAACGCAAAGATTATATGTGTAACATTTTGAATATAGAGACCAAAAAAGCATTTTGTCAAATTTTATTTTCAGTTTATTTTTTTCTATTTTCCAAATCAGACCTTTTGATCTATGATGCAATCTAATCTACCTTTGAAAACAGTTAAGCTCAATTTTAGAACTTAAGAAAAATAGTTTTCTTTATTAAAAAAAAAATCATATTTGTTTAAAATTAAATAAATAAAGAATTTGTTGGTGGAGTAAACTCTAAAGACAGTTTTGACCCTTTTTTTTTTCTGAAATGTTTTTTTTCCTCTTATTATGTATCATCTGCACCTCTGGGCTTGGTTTTGTGATTTCCAAGAACATTTCCCATTTGTTTGGGCTTCTGCGTTCTTGTGTTTTTTAACTTTTTTAAGAATCAGATTATTGTCTGTCACAGCTTTGCCCCATCAATGTTTTTATAAACCATAATTATTTTGAAATTGTATAAATTAAAATGTAAACTAATAACAACTTTTGTAAGTGTTTCAAGTTATATATATATATATATAGTGTTCATTATATTCCATATTAAACTATGAGCAGTAGTATTAGTTATTTATGTGGAGCTTGAGAAAAGCAAGAGTGTGAGGTCTGACAAAACAACTTGAAACATGGTTACAAAGCATTTTAAAATTATAGGACTATTCAAAACTGTGTTTTGCATATCCATTTTTCCTCATCCCCTTTATGTTTTTCCCTCTTTGTGTAAATATCCAAACAGAATCTATAGCCCATACAACATTATTTATTTATTTATTTATTTATTTTTAATTCCATTTTAAGCTCTTTAGTTTGTTCCAATTCCCCATATCTCCCATTTTCTTGCTATATCTTTTCTTTCTTCATGGGGTTTTCTTTTCAAAATTCAAAGAAAAACCCTCCAAAAACAAAAGCCACTTGGTACCATTGGATATTCTGATGTCAACAAAATTTAAGCTCCTGACATGGAGATTTTTAGGGTTTGGTAGAGATAAATTAAATGGACAATACCAGAGACTAGCTATCCATTATGTATATACTACCACTTACATATTGTTTGGAATATCGAGAAGAGAGAAGAAAATTCATATGTAAATATACCATTTGATTTTTTAGGAACAGAAAACTATAACCAAAATCATTTTTTAACCAAATCTTTGTTATTCATATATTTGCTCACTTGAAAAGTAGATTCGAAACTTAACTTGTAAATAAATATAATATATTATCATTGTATAAATAGATTCATTATCCTCTACATAAAAATTCTCATGTCCTTTTACCATTTCTTGTCTTCCTGAATTAATCTAGGTTTTTAAAATAAAATAAAATAAAATAAAAAATCAATCCCACTAATTGGGCTTTTTCAAACTATATATGAACTGTATCTCTTTTTAAGAATTTTTTAATATAATTTTGTTTACTTATTTACCCTTCAAATAGGGGTATCTGAGTCTTTTCTAGGGGTGTTTGGGGCGTTCTATAAGTTGGTTATTATCATTCGTGGGTTACAAGTGTTATAATAGTTTGTGTTTGGGTGCAAATTATTTTTGTCTTGGTCATAATAGATTGTGTTTGGGGTATAAATTATTTTAGTTTGGATAGGAAATAGTAAACATGATAACAAAGAGAGAAAGAGAGGATGTAATAAACATTATAACGAATAGTAACATTGTACCAAAGAGGAATTTGAAATCGTAATACCGTAGTTAATTATAATTGGAGCCCCAAACATGGAGTGAGGGCTATAATAGCCCATTCCACCCACTTGAAGTTGGAGACCCAAACATCCCCTTCATTTACTTGGATGATCGTTTCTTAACTTTATTAGTGATTCTTAAAATTCTATTTATATATTGTAATATATATTGAGTGGAAGAATGAAACATTTAACTTTAAAGTCGATAATATAAGTTGAATGAATAAAGATTACGTTTGAGTCTTATAATTGAATTGAAGGGGTAAGATACCCTTGTATATAGGCTTGTTATAGAACAGTGATTTATTCATACTAGGATTAAAAAAAGCTGGCCATCTGGTATTAAAGGATAAAGAAATTGGACTGATCAGTATTAAATAAAAATTGTACCATCTGTTCAGTTATTTCATCATTTTCATGACAAAGCTCAGTTCATTGAAAGAATCTGTCTAACATATATACATATACATATTAGGCAATAATTGGAAGTGATTTTGCATCTGCTTATACCATGAACAAAATCTTGGTGTCCTATTTTTTTTTAACTTTTCTAAAGCTTATTTCCCATCTACTTGCTCCAAAATAAAATTCTGGATCAAATTTTTTTTTTTTTTTGACAGATCAATTGTTTTAGGCATATTGTTAGTTTTTACTTTTTACAAAACTTACCAACTTAATCCCTCCCTTTTCTTTTGTCTGCATGATCACATTATTGTCTGTTAAATATGTTTGACACTCTAATTAATTTAATAATGTTATGCAAGGTCACCCATTTCTTAAATGATTTTAAATCTTAGCCTAATAGGATGGTTTGAACAAAAACCTTAACTTGGATGGAAGGTCATGTCAATTACTGCGAGTTAATCTTGCTTTGACTTGTAGTTATAAAACGTTTAACCATTTGTAATGATTAAAAGTGCAATTAGGTTTTCCTAAATTTTATAATCAAAGTTAAGGTTTCAAAACTTGAGAAATTGGTAGCAAAATTTTAGTATTAAAAACCTAAGCGAGATGGTTACACATCTACATGCAAATTGAGTTAGGTTTGATTTGGCAATGCCATATTATAGTATTATTTGGTTCCATGTCATTTAACTATTAATTCAATTGATCATTCAACATTAATAATGTGTCAGTATTAGTTCCTTGTTGAGTAGTTTAGATGGTAAGAAAGTGAATGAATGGTGTGTGGTAATTAAGAATATAATGTTGATGAAAGGATTAGTAGTAAAATAGTTATTATTATATGCAGTATCAAAACTACTATTGAGAGGTACAAGAAGGCTTGTTCTGATAGCTCAGCTACCAGCTCTGTCACTGAACTAAATACTCAAGTCAGCTTCTCTCTCCTTCATATTTTGAGTCTAGTTTCTATTTGATCTCTTGGTTTTAAAATATTACACTTTTATCTCTGAATTTTAGTTTCATTTTTATTTGGTCCCTAAATATTACTCTTGAGTTTTGAGTTTAGTTTTTTTACCCTCGAGAGTAAAAGTGTAACCTTTTGAAATCTAAGGACCAAATAGAAATTAAACTCTAGTGTAACATTTTGAAATCTAAAGACCAAATCGAAACTAGATATAAAACCTAGGTACTAAAAAGTTGTTTTTTCCATTAAAAAAAAAGAAGAAAAAAGAAAAAGAGAGTTTGTCATTGAAAGATTGTGTGAAGTTCTTAACTAAATCATAGAGATGAAATTGATATAGGTTTTAAATTATGAAAACCAAATTGAAACTATGCTTAAACCAAAAACACAAAATCTCTAATCAATCCAATTTTTCAAATGAAAAGCTTTGGTATTTTTAGAAATTGTACAACTTTAAAATTATTGTCGAATTATTTTTAAAAGTTTGAAAGTAAATTTAGGCATTCAATTGAGTATTATCTAGAAGAAATGCAAGAAAATATCACAAACGATGTACAATAAATTCATAAAATAATAACAAATTAACTAATTGGTCTTAATATTCATGAAGCCTAACATGTTCTTATGATATGTGACATGAAAAAAAAAAATGAAGTATTATCAGCAAGAATCGGCTAAGCTGCGTCAACAAATACAAATGCTTCAGAATTCCAACAGGTTATTATTATTTGTAATTTTTCTTTAATACCTCATTCATATGTATATATTATTGGGCTAAATATATAATTTTATCTTTAATATTTTCTTTTTTTTCTTTTTTTTTTTTTCAATTTCATCCCTAATTTTTTAACCAAGTTCATATAGAGTGTTGTTCGCAAAAGATTGTTAGGGTATATTTGTTTTAGCTTTAAAATCGTTCAATTTTGAAAAAAGTTTGAGTAATCGCGAAAAAATAAGTTTATAGAATAGGTTATTTTAGGATAATCACTTGAAATCAACTTTTAGGAAAATGATATCAAATTGATTTTCCTAATTTGTATAATTATATTAAAATGATAAAAACGTCCTCAAAAGTCATCTATCTCAAATTGAAAAAAAAAACCATTAATGAAAATGAAGAATAAAAAATACTTTCAGTATATAACAAATCAAACAAATTTGTTTCATAAATTTTTTTATATTACAATTTTGATGAAAAGTATTTAAATGAATTTTTTATTATTTCTTTTTTTTTTGAAAGTCAGAGTCCATTAGTTAAGAAGTATTTGAAAATATGCTTTTTATTCTAGGGTTGGGTGAAGAACACACTTATTTTATTATTATATTAGGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAAGAGACCGAGATAAAACAATGACGGTCAAGTCCACTTTTCTTCTCCCCATCCCACATTATATATGTGCGCAATGTTTATTCTTTGCTAATATTGAATATCTAATCTTGTAGTGTGATCGAATTAAAAGTATAAACACAACTTTTACCTGTGAATTTTTTCAATTCAAAAGATATTAGTTTAAATTTTTAGATTACAACTAAAAATTCAAATGTTTCATTAAGAAATGTGATAATCATAGCATGGAACTNGGAGAAAAAAAAAAAAAAAAAAAAGAAGACAGAAAGAGAGTTAAAATTCTTTTAAAATATATATATATATATATATTAAACACATAAAAGATGGAAATTAGGGAGGAAATTAGAGAAAAGAAAGAAAGAAAGAAATATTGAAAAGAAAAAATGATATATTTAGCCATGAAAGAAAGATATATTTAAGGTGGGGGTTGAATAAGCTACTCTCATTTGTTGAAGCAATCTTGTTAGGCACTTGATGGGGGACTCCTTGAGTGCTCTTACAGTCAAAGAACTAAAGCAGCTTGAAAATAGGCTTGAAAGGGGCATCACTAGAATCAGATCAAAGAAGGTTAATTCAATTTTCAATCTAATTAAATAAGTTTAATGAAGAATCATTACCTCTCTACAATTATATAATTGTTTTCAAAACATACTTCAATCTGCTTCTTTCTTCAACAGCATGAAATGTTGCTAGCAGAAATTGAGTATCTTCAAAAAAGGGTATTCTACACTTAAACCATCTTATTTCACATATTTTACCGTTTTAGACTCGTTTGATAATCATTTCGACAAATTTTCTTGTTAAATAATTGATGCTATTCCTTGTATATAGGAGATTGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGGTATGTATACACATCAAACTTCATTTCTTGCCCCTCTGGTAAATTGACATCTTAAACTAAGTATCAAAATCCACAATAAATCCACGTCAATCTGAACATAGTTTAATAGATAAAGACAACAGTTACCATTTCAATAATTGATAGTTTAATCTTCACAACCATTTGTGGGATGACATTCTTCTTCTGACAAGCCATTGGAATACTACATCAAACATTTTTTTGTAATTATGATGCCACTACCATTGCTTTAAATTGGATGGCTTTCCTTTGATTTGCCTTTGTTTTCGCCTTAGCTTTTGTATGAGCTTCACTCTAGCTCTTGCTGTAAATAACTTCTTTTATGAATGCATCGCTTTTGGCTTTGGGACGTGATGAGGGTGCTACGGTGGTGTTAACTTAGTTGAGATGTCCTGATGCACCTAGTGATCTCTGTGATCCCCATTAGTATTTTGTTAAAAAAAAAAAAAAAATTGATAGTTTAATCTCATGTCACAATTGTTGGACAAAGAAAATTTGGACATATCAACCATTTTTCTTTTTATGCTTTTATATTTTACCTAGTTTGTTTCGTCAATTTCTTTTCCTAGTTCAACAACATATAGTTGTTAGAAATGACTAGCCCATGAATTGATCATGGGTATATAGATGAGGATAGTTATTTCCAATAGTATGAGGTCTTTTAGGTGGTTCTAAAAGCAAAGCTATGAGAGTTTATGTCATAAGTGGACAATATCAATCATACTATTGTAGAGATAGGTGTGAGGATTCAAAAATAGAATATATGTCTTGACCAATTAAGCTATATATCGCTAAGTTTGCTTGTATGTAGTTGATATATGAATGTCTATCCATGATATGATATGTGTCTTAGCCAATTCAGCTATGCTCAAGTTGACATATTGAATAAAAAATTACTAAAGCTATAGCTTCTTAAAAAAAGTAGAATTCACATCTTAACTATTAAGTTACTATTATGATAGAGAGACCTCACAAGCTTTCAAGATACACGTGTTACTCCTCTCATTAACATTTGATTTTGAGATAAAATCCGTATTGATAAAATCTCATTTAGTTTATTCTAAATTCATATAGTGACAATAATTTCTTGTGTGTGGGGGGTTAGATAGCTGAAGTTGAGAGGCTCCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGTAATTTCTTCTCTCCTAATATGATGGAAGGTGGAGCTGTTACTTACTCTCATCAAGACAAGAAGATGCTTCATATTGGGTATTTCTCTCCAACTTTAGTATATAATAATTTGAGTTTCTATACTCTAAACTATCCAATGATTTTGTCTCTATCATAAATAATTATTGTTAAAATTAAAGACTACATCTGTCTATTCGCTACAAGGATTAAATCTTTACATAATAAACATTCAAACATACTTTTGATGGAAAATTTTCTCAAATTTAAAAGTGTAATTACTAAATGGATACGAATTAGATTTTATATAGGGACTAAATTGTTACTCGAATGAAAGTTAATAAATAAAAAATATGTGTTTGTTAGAATTAAAGGTTGAATGGGATAAAATTAAAAGTGATCAAGACTCTTATGTTTGAATAGGCAATGATTTTTTTTTTTTTTCCGCTTCTGATGCACAGGTGATGATTTGCAGCTGTTTTGGTGACCAAAATGATGGGGACAAATGTTTGTTTTGATTACTATTCAGGAAATCATTGAGATTGCAAAAAAATTAAAATAAAATATGCCCATCATTTTGTGAAGTAAAAAATTTAATTAATTTTACTTAATGATCAATGATGATGATGATCAGTGTGTGATGTGATTTGCAGCTGTGTGTGTTTCAAATTATATATATATTATATACTGCATACATATGATATGTGCTACATCGACTCTAATGATGATGTGTAATTCTATGGATGATTCTTGTGCCCACATGGACCAATAGGAATGTGAAACTTGTCAACTCTAGAGTTTTACTTTTGATCTC

mRNA sequence

AAAAAAAAGCAAAAGAGGGGTTGATGCAAAATTAAAATTAAAAGGATTAGTGTGTGGGTATTAGGTAGATTTTGCATTAAGTAAATGAAAAGAAATTGTGAAGAAGGAGAGAAAGGGGCAAAAAGGTAAAATAAAAAAAATGAAAGGGAAAGAAAAAAGTAAAGGAAAGTATTGCTGATTTTGGTGGGAATTTGGAAATGCAGAGAAGTTTTAATTCAGCTATAACTCCAATGTCTTGTATCAGTTTCAGGCAAACTCCCACTTTCTCTCTCTCTTTTCTAAAATATATTGACAGATTTCCATTCAGATTTTGTATTTTTGAGATTTGCTTACTAAAGAAGCTTCATTTTTCTTCTACCTTTCTTAATTTTATTGGAAAATTCATCTCAAACCCTCCATTTCTCTAAGGTTTGTTTTCTTTCTTCATCATTTCTTCAAACCCCTCTAACCAAAAATTAAACCCTTTTCCCATTTTTGTTCATCATTTAGATCTATCTGTTCAACCCATACAACTAAAATCATCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTGCATTCTTTTGGGAAGATATCAAAAGATCAGTAGAGAAGATCGATGGGGAGAGGAAAGATTGAAATAAAGAGAATAGAAAACACAACAAATCGACAAGTGACATTCTGCAAGAGAAGAAATGGACTTTTGAAGAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGTGAAAGAACTGTTCATGGAACATTAAAAAGGAATAAAAACAAAACAACCTCTTCCCACTTCAAACTCAATGTTCCCTTCATTTCTAGGCTTTGCCCCATCAATGTTTTTATAAACCTAGTATTAGTTATTTATGTGGAGCTTGAGAAAAGCAAGAGTGTGAGATCAATTGTTTTAGGCATATTGCACTTGATGGGGGACTCCTTGAGTGCTCTTACAGTCAAAGAACTAAAGCAGCTTGAAAATAGGCTTGAAAGGGGCATCACTAGAATCAGATCAAAGAAGCATGAAATGTTGCTAGCAGAAATTGAGTATCTTCAAAAAAGGGAGATTGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGATAGCTGAAGTTGAGAGGCTCCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGTAATTTCTTCTCTCCTAATATGATGGAAGGTGGAGCTGTTACTTACTCTCATCAAGACAAGAAGATGCTTCATATTGGGTGATGATTTGCAGCTGTTTTGGTGACCAAAATGATGGGGACAAATGTTTGTTTTGATTACTATTCAGGAAATCATTGAGATTGCAAAAAAATTAAAATAAAATATGCCCATCATTTTGTGAAGTAAAAAATTTAATTAATTTTACTTAATGATCAATGATGATGATGATCAGTGTGTGATGTGATTTGCAGCTGTGTGTGTTTCAAATTATATATATATTATATACTGCATACATATGATATGTGCTACATCGACTCTAATGATGATGTGTAATTCTATGGATGATTCTTGTGCCCACATGGACCAATAGGAATGTGAAACTTGTCAACTCTAGAGTTTTACTTTTGATCTC

Coding sequence (CDS)

ATGGGGAGAGGAAAGATTGAAATAAAGAGAATAGAAAACACAACAAATCGACAAGTGACATTCTGCAAGAGAAGAAATGGACTTTTGAAGAAAGCTTATGAACTCTCTGTTCTTTGTGATGCTGAAGTTGCCCTCATTGTCTTCTCCAGCCGTGGCCGTCTCTATGAATACTCCAATAACAGTGAAAGAACTGTTCATGGAACATTAAAAAGGAATAAAAACAAAACAACCTCTTCCCACTTCAAACTCAATGTTCCCTTCATTTCTAGGCTTTGCCCCATCAATGTTTTTATAAACCTAGTATTAGTTATTTATGTGGAGCTTGAGAAAAGCAAGAGTGTGAGATCAATTGTTTTAGGCATATTGCACTTGATGGGGGACTCCTTGAGTGCTCTTACAGTCAAAGAACTAAAGCAGCTTGAAAATAGGCTTGAAAGGGGCATCACTAGAATCAGATCAAAGAAGCATGAAATGTTGCTAGCAGAAATTGAGTATCTTCAAAAAAGGGAGATTGAGCTGGAGAATGAAAATGTGTGTATTAGAACCAAGATAGCTGAAGTTGAGAGGCTCCAACAAGCAAACATGGTATCTGGACAAGAACTGAATGCAATTCAGGCATTGGCTTCTCGTAATTTCTTCTCTCCTAATATGATGGAAGGTGGAGCTGTTACTTACTCTCATCAAGACAAGAAGATGCTTCATATTGGGTGA

Protein sequence

MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSKSVRSIVLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG

Homology

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BLAST of ClCG08G000410 vs. NCBI nr
Match: AAO20104.1 (mads-box transcription factor [Momordica charantia])

HSP 1 Score: 324.7 bits (831), Expect = 6.6e-85
Identity = 184/239 (76.99%), Postives = 198/239 (82.85%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T  G  K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIGRYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. NCBI nr
Match: XP_022149992.1 (agamous-like MADS-box protein AGL11 isoform X2 [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-84
Identity = 182/241 (75.52%), Postives = 195/241 (80.91%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVR 120
           S +T     K+  + +  TSS  +LN                    Y + E +K    ++
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQ------------------YYQQESAKLRQQIQ 120

Query: 121 SIVLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180
            +     HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN
Sbjct: 121 MLQNSNRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180

Query: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHI 237
           ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+
Sbjct: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHL 223

[Close]

BLAST of ClCG08G000410 vs. NCBI nr
Match: ADN22973.1 (mads-box transcription factor [Siraitia grosvenorii])

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-84
Identity = 183/239 (76.57%), Postives = 197/239 (82.43%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T     K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIDRYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFNPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. NCBI nr
Match: XP_022149989.1 (agamous-like MADS-box protein AGL11 isoform X1 [Momordica charantia] >XP_022149991.1 agamous-like MADS-box protein AGL11 isoform X1 [Momordica charantia])

HSP 1 Score: 321.6 bits (823), Expect = 5.6e-84
Identity = 183/239 (76.57%), Postives = 197/239 (82.43%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T     K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. NCBI nr
Match: XP_038889600.1 (agamous-like MADS-box protein AGL11 isoform X1 [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 1.0e-82
Identity = 182/242 (75.21%), Postives = 195/242 (80.58%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVR 120
           S +T     K+  + +  TSS  +LN                    Y + E +K    ++
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQ------------------YYQQESAKLRQQIQ 120

Query: 121 SIVLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180
            +     HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN
Sbjct: 121 MLQNSNRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180

Query: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMME-GGAVTYSHQDKKMLH 237
           ENVCIRTKIAEVER+QQANMVSGQELNAIQALASRNFFSPNMME GGAVT+SHQDKKMLH
Sbjct: 181 ENVCIRTKIAEVERVQQANMVSGQELNAIQALASRNFFSPNMMEGGGAVTFSHQDKKMLH 224

[Close]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot
Match: F6I457 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.4e-75
Identity = 158/239 (66.11%), Postives = 182/239 (76.15%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR+YEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           + ++     K+  + +T+    + +                   Y + E +K    ++ +
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEIN----------------AQYYQQESAKLRQQIQML 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSL++LTVKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+
Sbjct: 121 QNSNRHLMGDSLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENES 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           V +RTKIAEVERLQQANMVS  E NAIQAL SRNFF PNM+EGG+  Y   DKK+LH+G
Sbjct: 181 VYLRTKIAEVERLQQANMVSTHEFNAIQALVSRNFFQPNMIEGGSTGYPLPDKKVLHLG 223

[Close]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot
Match: A0A217EJJ0 (Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.4e-74
Identity = 157/239 (65.69%), Postives = 181/239 (75.73%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGR+YEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRVYEYSNN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           + ++     K+  + +T+    + +                   Y + E +K    ++ +
Sbjct: 61  NIKSTIDRYKKASSDSTNGGSTMEIN----------------AQYYQQESAKLRQQIQML 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSL++LTVKELKQLENRLERGITRIRSKKHE+LLAEIEYLQKREIELENE+
Sbjct: 121 QNSNRHLMGDSLASLTVKELKQLENRLERGITRIRSKKHELLLAEIEYLQKREIELENES 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           V +RTKIAEVERLQQANMVS  E NAIQAL S NFF PNM+EGG+  Y   DKK+LH+G
Sbjct: 181 VYLRTKIAEVERLQQANMVSTHEFNAIQALVSLNFFQPNMIEGGSAGYPLPDKKVLHLG 223

[Close]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot
Match: Q38836 (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=1 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 5.1e-64
Identity = 145/246 (58.94%), Postives = 180/246 (73.17%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           +   +  T++R K   + S     V  I+               Y + E +K    +++I
Sbjct: 61  N---IRSTIERYKKACSDSTNTSTVQEIN-------------AAYYQQESAKLRQQIQTI 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                +LMGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN
Sbjct: 121 QNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNEN 180

Query: 181 VCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM-----EGGAVTYSHQDK 237
           + +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M      G   +YS  DK
Sbjct: 181 IYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMTAGSGSGNGGSYSDPDK 230

[Close]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot
Match: Q93XH4 (Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.9e-52
Identity = 127/241 (52.70%), Postives = 160/241 (66.39%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEK-SKSVRSI 120
           S RT     K+  + +  T S  + N  F  +                E  K  + +R I
Sbjct: 61  SVRTTIERYKKVCSDSSNTGSVSEANAQFYQQ----------------EASKLRRQIRDI 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                H++G++LS+L  KELK LE RLE+GI+RIRSKK+E+L AEIEY+QKREIEL+N N
Sbjct: 121 QNLNRHILGEALSSLNFKELKNLETRLEKGISRIRSKKNELLFAEIEYMQKREIELQNSN 180

Query: 181 VCIRTKIAEVERL-QQANMVSGQELNAI--QALASRNFFSPNMMEGGAVTYSHQDKKMLH 236
           + +R +IAE ER  QQ N++ G +  ++  Q   S+N    N+++     YS  D+  L 
Sbjct: 181 LFLRAQIAENERAQQQMNLMPGSQYESVPQQPYDSQNLLPVNLLDPNH-HYSRHDQTALQ 224

[Close]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot
Match: Q40872 (Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.9e-51
Identity = 130/242 (53.72%), Postives = 162/242 (66.94%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 17  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 76

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           S   V GT++R K   T S      P  S +   N         + + E SK    + SI
Sbjct: 77  S---VKGTIERYKKACTDS------PNTSSVSEAN-------AQFYQQEASKLRQEISSI 136

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                ++MG+SL +LTV++LK LE +LE+GI+RIRSKK+E+L AEIEY+QK+EI+L N N
Sbjct: 137 QKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNN 196

Query: 181 VCIRTKIAEVERLQQ-ANMVSGQ---ELNAIQALASRNFFSPNMMEGGAVTYSHQDKKML 236
             +R KIAE ER QQ  N++ G    EL   Q+   RN+   N ++     YS QD+  L
Sbjct: 197 QYLRAKIAENERAQQHMNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNN-HYSRQDQTAL 241

[Close]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL
Match: Q84XW0 (Mads-box transcription factor OS=Momordica charantia OX=3673 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.2e-85
Identity = 184/239 (76.99%), Postives = 198/239 (82.85%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T  G  K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIGRYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL
Match: A0A6J1D9I0 (agamous-like MADS-box protein AGL11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018273 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.1e-84
Identity = 182/241 (75.52%), Postives = 195/241 (80.91%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVR 120
           S +T     K+  + +  TSS  +LN                    Y + E +K    ++
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQ------------------YYQQESAKLRQQIQ 120

Query: 121 SIVLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180
            +     HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN
Sbjct: 121 MLQNSNRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180

Query: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHI 237
           ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+
Sbjct: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHL 223

[Close]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL
Match: G9B9E5 (Mads-box transcription factor OS=Siraitia grosvenorii OX=190515 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.1e-84
Identity = 183/239 (76.57%), Postives = 197/239 (82.43%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T     K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIDRYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFNPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL
Match: A0A6J1DA38 (agamous-like MADS-box protein AGL11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018273 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.7e-84
Identity = 183/239 (76.57%), Postives = 197/239 (82.43%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISR-LCPINVFINLVLVIYVELEKSKSVRSI 120
           S +T     K+  + +  TSS  +LN  +  +    +   I +     ++   S  VR  
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQYYQQESAKLRQQIQM-----LQNSNSNLVR-- 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN
Sbjct: 121 -----HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180

Query: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQDKKMLHIG 237
           VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFF+PNMMEGGAVT+SHQDKKMLH+G
Sbjct: 181 VCIRTKIAEVERLQQANMVSGQELNAIQALASRNFFTPNMMEGGAVTFSHQDKKMLHLG 227

[Close]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL
Match: Q9SBK3 (Agamous-like putative transcription factor OS=Cucumis sativus OX=3659 GN=CAG1 PE=2 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 6.9e-80
Identity = 179/243 (73.66%), Postives = 193/243 (79.42%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN
Sbjct: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60

Query: 61  SERTVHGTLKR--NKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVR 120
           S +T     K+  + +  TSS  +LN                    Y + E +K    ++
Sbjct: 61  SIKTTIERYKKACSDSSATSSVTELNTQ------------------YYQQESAKLRQQIQ 120

Query: 121 SIVLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180
            +     HLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN
Sbjct: 121 MLQNSNRHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELEN 180

Query: 181 ENVCIRTKIAEVERLQQANMVSGQELNAIQALA-SRNFFSPNMME-GGAVTYSHQDKKML 237
           ENVCIRTKIAEVER+QQANMVSGQELNAIQALA SRNFFSPN+ME  G V+YSHQDKKML
Sbjct: 181 ENVCIRTKIAEVERVQQANMVSGQELNAIQALANSRNFFSPNIMEPAGPVSYSHQDKKML 225

[Close]

BLAST of ClCG08G000410 vs. TAIR 10
Match: AT4G09960.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-65
Identity = 145/246 (58.94%), Postives = 180/246 (73.17%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           +   +  T++R K   + S     V  I+               Y + E +K    +++I
Sbjct: 61  N---IRSTIERYKKACSDSTNTSTVQEIN-------------AAYYQQESAKLRQQIQTI 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                +LMGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN
Sbjct: 121 QNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNEN 180

Query: 181 VCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM-----EGGAVTYSHQDK 237
           + +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M      G   +YS  DK
Sbjct: 181 IYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMTAGSGSGNGGSYSDPDK 230

[Close]

BLAST of ClCG08G000410 vs. TAIR 10
Match: AT4G09960.3 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 245.7 bits (626), Expect = 3.6e-65
Identity = 145/246 (58.94%), Postives = 180/246 (73.17%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 27  MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 86

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           +   +  T++R K   + S     V  I+               Y + E +K    +++I
Sbjct: 87  N---IRSTIERYKKACSDSTNTSTVQEIN-------------AAYYQQESAKLRQQIQTI 146

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                +LMGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKREIEL+NEN
Sbjct: 147 QNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNEN 206

Query: 181 VCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM-----EGGAVTYSHQDK 237
           + +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M      G   +YS  DK
Sbjct: 207 IYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMTAGSGSGNGGSYSDPDK 256

[Close]

BLAST of ClCG08G000410 vs. TAIR 10
Match: AT4G09960.4 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 240.0 bits (611), Expect = 2.0e-63
Identity = 145/250 (58.00%), Postives = 180/250 (72.00%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           +   +  T++R K   + S     V  I+               Y + E +K    +++I
Sbjct: 61  N---IRSTIERYKKACSDSTNTSTVQEIN-------------AAYYQQESAKLRQQIQTI 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKR----EIEL 180
                +LMGDSLS+L+VKELKQ+ENRLE+ I+RIRSKKHE+LL EIE  QKR    EIEL
Sbjct: 121 QNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKRLILQEIEL 180

Query: 181 ENENVCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM-----EGGAVTYS 237
           +NEN+ +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M      G   +YS
Sbjct: 181 DNENIYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMTAGSGSGNGGSYS 234

[Close]

BLAST of ClCG08G000410 vs. TAIR 10
Match: AT4G09960.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 218.4 bits (555), Expect = 6.2e-57
Identity = 135/246 (54.88%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           MGRGKIEIKRIEN+TNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 1   MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANN 60

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           +   +  T++R K   + S     V  I+               Y + E +K    +++I
Sbjct: 61  N---IRSTIERYKKACSDSTNTSTVQEIN-------------AAYYQQESAKLRQQIQTI 120

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                +LMGDSLS+L+VKELKQ+ENRLE+ I+RIRSKK              EIEL+NEN
Sbjct: 121 QNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKK--------------EIELDNEN 180

Query: 181 VCIRTKIAEVERLQQAN--MVSGQELNAIQALASRNFFSPNMM-----EGGAVTYSHQDK 237
           + +RTK+AEVER QQ +  MVSG E+NAI+ALASRN+F+ ++M      G   +YS  DK
Sbjct: 181 IYLRTKVAEVERYQQHHHQMVSGSEINAIEALASRNYFAHSIMTAGSGSGNGGSYSDPDK 216

[Close]

BLAST of ClCG08G000410 vs. TAIR 10
Match: AT2G42830.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-51
Identity = 126/247 (51.01%), Postives = 163/247 (65.99%), Query Frame = 0


Query: 1   MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 60
           +GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL++FS+RGRLYEY+NN
Sbjct: 16  IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SERTVHGTLKRNKNKTTSSHFKLNVPFISRLCPINVFINLVLVIYVELEKSK---SVRSI 120
           S   V GT++R K   + +   +N P I+               Y + E SK    +R I
Sbjct: 76  S---VRGTIERYKKACSDA---VNPPTITE----------ANTQYYQQEASKLRRQIRDI 135

Query: 121 VLGILHLMGDSLSALTVKELKQLENRLERGITRIRSKKHEMLLAEIEYLQKREIELENEN 180
                H++G+SL +L  KELK LE+RLE+GI+R+RSKKHEML+AEIEY+QKREIEL+N+N
Sbjct: 136 QNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDN 195

Query: 181 VCIRTKIAEVERLQQAN---------MVSGQELNAIQALASRNFFSPNMMEGGAVTYSHQ 236
           + +R+KI E   LQQ             SG   +      +RN+ + N++E      S+Q
Sbjct: 196 MYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQ-NSSNQ 245

The following BLAST results are available for this feature:

BLAST of ClCG08G000410 vs. NCBI nr


Match Name	E-value	Identity	Description
AAO20104.1	6.6e-85	76.99	mads-box transcription factor [Momordica charantia]	[more]
XP_022149992.1	4.3e-84	75.52	agamous-like MADS-box protein AGL11 isoform X2 [Momordica charantia]	[more]
ADN22973.1	4.3e-84	76.57	mads-box transcription factor [Siraitia grosvenorii]	[more]
XP_022149989.1	5.6e-84	76.57	agamous-like MADS-box protein AGL11 isoform X1 [Momordica charantia] >XP_0221499...	[more]
XP_038889600.1	1.0e-82	75.21	agamous-like MADS-box protein AGL11 isoform X1 [Benincasa hispida]	[more]

BLAST of ClCG08G000410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F6I457	8.4e-75	66.11	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=2 SV=...	[more]
A0A217EJJ0	5.4e-74	65.69	Agamous-like MADS-box protein AGL11 OS=Vitis vinifera OX=29760 GN=AGL11 PE=3 SV=...	[more]
Q38836	5.1e-64	58.94	Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana OX=3702 GN=AGL11 PE=...	[more]
Q93XH4	9.9e-52	52.70	Agamous-like MADS-box protein MADS1 OS=Vitis vinifera OX=29760 GN=MADS1 PE=2 SV=...	[more]
Q40872	4.9e-51	53.72	Floral homeotic protein AGAMOUS OS=Panax ginseng OX=4054 GN=AG2 PE=2 SV=1	[more]

BLAST of ClCG08G000410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q84XW0	3.2e-85	76.99	Mads-box transcription factor OS=Momordica charantia OX=3673 PE=2 SV=1	[more]
A0A6J1D9I0	2.1e-84	75.52	agamous-like MADS-box protein AGL11 isoform X2 OS=Momordica charantia OX=3673 GN...	[more]
G9B9E5	2.1e-84	76.57	Mads-box transcription factor OS=Siraitia grosvenorii OX=190515 PE=2 SV=1	[more]
A0A6J1DA38	2.7e-84	76.57	agamous-like MADS-box protein AGL11 isoform X1 OS=Momordica charantia OX=3673 GN...	[more]
Q9SBK3	6.9e-80	73.66	Agamous-like putative transcription factor OS=Cucumis sativus OX=3659 GN=CAG1 PE...	[more]

BLAST of ClCG08G000410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G09960.1	3.6e-65	58.94	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.3	3.6e-65	58.94	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.4	2.0e-63	58.00	K-box region and MADS-box transcription factor family protein	[more]
AT4G09960.2	6.2e-57	54.88	K-box region and MADS-box transcription factor family protein	[more]
AT2G42830.1	1.7e-51	51.01	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..176
None	No IPR available	PANTHER	PTHR48019:SF99	AGAMOUS-LIKE MADS-BOX PROTEIN AGL11	coord: 2..226
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 2..226
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 64.74 coord: 3..23 score: 72.99 coord: 23..38 score: 86.34
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 1.3E-42 score: 157.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.3E-26 score: 91.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 34.089954
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..83 e-value: 1.0E-25 score: 91.4
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..80
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 119..184 e-value: 5.1E-18 score: 65.1
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 98..190 score: 10.830233
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..80 e-value: 4.46187E-40 score: 130.75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG08G000410.2	ClCG08G000410.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding