ClCG07G017440 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG07G017440
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	polyadenylate-binding protein-interacting protein 12
Location	CG_Chr07: 33881438 .. 33885390 (-)
RNA-Seq Expression	ClCG07G017440
Synteny	ClCG07G017440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGTTGAATACGTATTTAAAATTAAAGGGAAAAAAAAAGAAGTAAAAAATGGTAAAAAGAGAAGGTTGTGGTGGTTGATGAATGATATTTCCATTTATAATGGGGAAAAATAAAAAAGAGAAAAGAAATAAATGGGAGAGTATAAAGAAAAGAAGGAAATGCATGATGGATGGTGATTGTTCATTCATGCATGGGTAATGGGTAATGGGTAATGGGAAGGAGAAGATGGGTATTTTAGGAATTATTGAAAAATTTGGTTGGATGACTGGGTGCGGGTTTGGTGTCCCTGAAATATGTTGAGAGGAAGGGGAAGGAGGCGTACGAAAAGATTCATCTCATCGCTCATTTCTGGGATGCTGTGAAACCCAAAGCCAAAGCCACTCCACCGCAATCCGACGATCTCAACGCCGGCCAAACCAACGTACACACTCCTAATCCTTCTCTCTCTCTCTCTACACTAATTTACCAATCCATCATCGCCCCTTTCGCATTTTTTATTTTATTTTATTTATTTATTTATTTTTCTTTGATAATAGAGGAAACTGAGACTTCGCCTCTTTCTCTCTAACTTTTGTTAATTCGCACAGAGGGTTTCTCGTTTTCATTTCGATCCTCTTCAATTTCGTTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCTTGCTGGGTTTCCTCGTTTACCAATGGAAATGTATTGATATGCCCTTCCCACCCTCTTCAGGTAACACGCAACCACTTCCTTCTTTTTCTTTTTTCTTTTTTCTTTCTACGCCGACGGATATCTTGATCATACGATTCATTTTATTTTTCAGAATAAGATTGCAAAAACAACGATCTTCTTGCATAAACTTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGGTATGTGGAGATGTTTGTTTTGTTCAAAGATGTGAAAGTTTGTTTGCACTTATTATTAACCTTTGAATGCCCTGCACTTTGTTTGATTTCTGGAGAACCAAACCCCTCAGACTTAACATGCCTGATGGATTTGTCGGGTGAAAGTGTTGGAGTTTATATATTTTCCGGTGTTCTTTTTTAAGTGCTGTGAACCTGCTATAAGAGTATTATTTGATTGCACATTTTAGTACTAGTGGACTTTTGAGAAATCTGTTCTATTTCTTTTATTTATGTTGCATAATCTCATAGTGATTTGTATTTTTTTTTTCTTTTCCTTTTTCTCTATTCCTTTTGCTTAGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTAAGAGGCTTCCACCCCCAAACTCTCCTGCTTATGTGCCTTGCCTTGTCCTTTTTTACCTATTCATTTTTTGGATCATGGAAATGCATTGTAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTGACTGGTTATTCTCTTTTCTCCATTTGATATGATTATTGGCATCTTACTGCTAGCTTAATGTTGTCTTCTTCAATAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGGTACAATCCCAATTCTGTATATTGATAGATGCATTTCCTACTTGATATCATGTTTAATTTACTTCGTGCTTGCAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGGTAATTGGCTGCCCTCAATGGCATTCATCTATTTTTACTACATTCTAATTTGTTGTTAGCTATGCTATCAACTCATTTTAATTTATTCTACTTCTCTTGAAATTGGCTTTCTTGTGTTTTATTGTTTCTAGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTAGGTTTGGAAGTGGAAAATCTCTGAATGTATTTGAGAACTGTGTTTTTGGAAGAGGAGAAGATGAAAGAACTTCAATATTGTCGATTGCTATATTGATTGTTTTCATTTCATGCAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTTGCACTTTCTCAACAGATGTCGTATTTCTTCAAACTTTTATTAGATTCTCTTTACGGTGCTTTTATATTATCTGGTTGACTTCATCCATGTCATCTGTTAACCCTGTGTAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGGTAATTCTGTTCTTTTCCATTGATTTTGTTGCTTTTTTCTAACCTTTCCTCCTGCCATGTTTATACCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGGGTGGATGTGGTAGTCTGTTGTGGTTCTTGTACTCTTACCGTTCTCCCTCACCAGTACATTTCTGGGTTGCTGGGGTTTAGAATGCATCTACAGTACCTGCTGTACGTATCATATCTATCAGTAATAATGGATGTGGTTTTCCTTATCAACCAGTCTGTTGTGGTTCTTGTATTTGCCATTGACCAATACATCTTTGCTTTTGTGGTGTCAAGAATGAATCTAGAGTACGTGCTTCACGTATTTTATCTTTCAGTAAACTTCACTTGATTGATGTCTTTAAGGTTCATTTCACTGCTGTCGAGCAATGTCAAATATCGTTGCAATGCATGCTTCATCTTCTATAATCATCTAATATATGTTCACTTTCCTTTGAGTGACTCTAGTGTTTCATGTTTGTGAATAACAAAGCATTAGCTATGCCCTAAAAGTCTTTTTGGAGAACAGTGGTGTTTACCCATGTAGTTGCACGAATGTTTACCTGTGCAGTCACATGAATGTTATCGTGTTTGGCTGTAACCACCTCTTCCATAGCTTTGCATGAAAGTGTGTGCATTTGTTTTTAATTTGCAGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGTTATTATAGCTCATTCTTGTTTCCTTTTCTGTTATTGGGTATTTTGAAAAATTGTGTTTTCGTTCTGAAAGGCATAACAATTCTGTCTCTTATGGGTTCATTTTCAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

mRNA sequence

ATGAGGAAGGGGAAGGAGGCGTACGAAAAGATTCATCTCATCGCTCATTTCTGGGATGCTGTGAAACCCAAAGCCAAAGCCACTCCACCGCAATCCGACGATCTCAACGCCGGCCAAACCAACAGGGTTTCTCGTTTTCATTTCGATCCTCTTCAATTTCGTTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCTTGCTGGGTTTCCTCGTTTACCAATGGAAATAATAAGATTGCAAAAACAACGATCTTCTTGCATAAACTTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Coding sequence (CDS)

ATGAGGAAGGGGAAGGAGGCGTACGAAAAGATTCATCTCATCGCTCATTTCTGGGATGCTGTGAAACCCAAAGCCAAAGCCACTCCACCGCAATCCGACGATCTCAACGCCGGCCAAACCAACAGGGTTTCTCGTTTTCATTTCGATCCTCTTCAATTTCGTTTCTGCTCTCTTACTTCTTCCACTCCACGATCTCTTGCTGGGTTTCCTCGTTTACCAATGGAAATAATAAGATTGCAAAAACAACGATCTTCTTGCATAAACTTGTCTCTCATCATGGCGGTTGCTGAGAATGTTGGACCTAAAATCGGCTCTCCAAGTCAAACTCTGGAAAATACCATGCTTTCCTCCGATTCTAATGACCCTAAGGATGTTGAAAATCAGAAGCCTAAGAACGATTCTACGCTTCCGATGAATGCAGAATCCGACTTTCATCCCAACGCCAATGATCAGAATATACAGAAGAAGCCACATCTTCAGGAGAGAGCTGCTGCCGCAACTTCTTTTTCACTTCCTTCGCCCAATTTCAACGCCCAAATGGGTCAGATGCAGAACGGGTTTGAAACTAATGGTCAGTCGTTGATGGTGAAGTCTGCTTCTGGTTATGGGATGAATCAGATGCCTAATGGAGTCATAAATGGAGCCGATGGAGGGGAAAACTTTAAAAGAGATATGAGGGATCTGGAGGAGTTACTATCCAAATTGAATCCCATGGCTGAGGAATTTGTCCCTCCTTCATTAGCCAAAAACTTTTCTGGTTACTTCAGCGGTGCTGGCCTTGGGTATACTAACGACTTTCTATTGCAAGCTAATTCTGCCAACAACGAAGGGAATAATAGTCGAAGGAAGAAGAATGGTTTTAGTCAAGGGAGACGGAGGATGAATAATAAGATGAATGCGGTGAAGCGAGATGAGATGACCCGAAGGACGGTGTATGTATCAGACATTGATCAGCAGGTGACTGAAGAGCTACTTGCTACTGTCTTTGCTAGCTGTGGAGAGGTTGTTGACTGTCGTATCTGTGGTGATCCCAACTCCATTCTTCATTTTGCCTTCATTGAGTTCACTGATGAAGAGGGTGCACGGGCTTCCTTGAATCTTTCAGGCACAGTGCTTGGTTTCTATCCAGTCAGAGTGCTGCCCTCGAAAACTGCAATAGCACCAGTCAATCCTGACTTCTTACCCAGGTCGGATGACGAACGTGAGATGTGCTCAAGAACTATCTATTGTACAAATATTGACAAGAAGGTTACTCAAGCAGAGGTCAAGCTATTCTTTGAATCACTATGTGGAGAGGTTCAGCGTCTTAGGCTACTTGGAGATTATCATCATTCCACACGTATAGCCTTTGTTGAGTTTACAATGGCTGAGAGTGCAATTGCTGCGCTTAATTGCAGTGGAGTGGTGTTGGGTTCCCTGCCAATAAGGGTGAGCCCGTCAAAGACTCCAGTTCGTCCTCGCTCTCCTCGTGCCCAGCTGAACTGA

Protein sequence

MRKGKEAYEKIHLIAHFWDAVKPKAKATPPQSDDLNAGQTNRVSRFHFDPLQFRFCSLTSSTPRSLAGFPRLPMEIIRLQKQRSSCINLSLIMAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN

Homology

[Close]

BLAST of ClCG07G017440 vs. NCBI nr
Match: XP_038900938.1 (polyadenylate-binding protein-interacting protein 12 [Benincasa hispida])

HSP 1 Score: 765.8 bits (1976), Expect = 2.3e-217
Identity = 390/402 (97.01%), Postives = 395/402 (98.26%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQ+LENTM+SSDSNDPKDVENQKPKNDSTLPMNAE DFHPNANDQN
Sbjct: 1   MAVAENVGPKIGSPSQSLENTMVSSDSNDPKDVENQKPKNDSTLPMNAEPDFHPNANDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 212
           +QKK HLQERAAAATSFSLPSPNF AQMGQMQNGFETNGQSLMVKSASGYGMNQ PNGVI
Sbjct: 61  MQKKVHLQERAAAATSFSLPSPNFKAQMGQMQNGFETNGQSLMVKSASGYGMNQRPNGVI 120

Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 272
           NGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF GAGLGYT+DFLLQANS
Sbjct: 121 NGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFGGAGLGYTSDFLLQANS 180

Query: 273 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 332
            NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC
Sbjct: 181 VNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 240

Query: 333 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 392
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 300

Query: 393 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 452
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 453 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of ClCG07G017440 vs. NCBI nr
Match: XP_004137206.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_011653324.1 polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >KGN53617.1 hypothetical protein Csa_014431 [Cucumis sativus])

HSP 1 Score: 741.1 bits (1912), Expect = 6.2e-210
Identity = 379/403 (94.04%), Postives = 388/403 (96.28%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ+RAAAATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. NCBI nr
Match: XP_008462907.1 (PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo])

HSP 1 Score: 739.6 bits (1908), Expect = 1.8e-209
Identity = 378/403 (93.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ+RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. NCBI nr
Match: TYK04620.1 (polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa])

HSP 1 Score: 738.8 bits (1906), Expect = 3.1e-209
Identity = 378/403 (93.80%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. NCBI nr
Match: XP_022984928.1 (polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_022984929.1 polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima])

HSP 1 Score: 738.4 bits (1905), Expect = 4.0e-209
Identity = 375/402 (93.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQ+ ENTMLSSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 212
            QKK HLQERAAAA SF+LPSPNF +QMGQMQNGFETN QSLMVKSA GYGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 272
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 273 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 332
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 333 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 392
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 393 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 452
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 453 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot
Match: Q9LPI5 (Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=3702 GN=CID11 PE=2 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 4.7e-112
Identity = 207/284 (72.89%), Postives = 236/284 (83.10%), Query Frame = 0


Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 272
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 273 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 332
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 333 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 392
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 393 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 452
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 453 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 491
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot
Match: Q9S7N9 (Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=3702 GN=CID12 PE=1 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 5.4e-108
Identity = 207/325 (63.69%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 171 LPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEE 230
           L SP+  + +   ++G  +N          G G++      +  +DGGE+FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 231 LLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQG 290
           LLSKLNPMA+EF+PPSL K     F+G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 291 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 350
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 351 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 410
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 411 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVL 470
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+L
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLL 317

Query: 471 GSLPIRVSPSKTPVRPRS-PRAQLN 495
           GSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot
Match: Q9SG10 (Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=3702 GN=CID10 PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.5e-105
Identity = 219/404 (54.21%), Postives = 276/404 (68.32%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 152
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 153 NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 212
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 213 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 272
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 273 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 332
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 333 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 392
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 393 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 452
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 453 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 493
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot
Match: Q9LRR6 (Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3702 GN=CID9 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 7.6e-86
Identity = 165/274 (60.22%), Postives = 207/274 (75.55%), Query Frame = 0


Query: 224 DMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGY-TNDFLLQANSANNE------ 283
           DM  L  +  KLNP+A+EF P       +   + A      +DF      +  E      
Sbjct: 49  DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKANQFLPADDFETTKKQSGEEFDLDAK 108

Query: 284 GNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVV 343
            +++ RK+  +SQGRRR+  +++  +R++  RRTVYVSDIDQ VTEE LA +F++CG+VV
Sbjct: 109 KDDNTRKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVV 168

Query: 344 DCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPR 403
           DCRICGDP+S+L FAF+EF D++GA  +L+L GT+LGFYPVRVLPSKTAI PVNP FLPR
Sbjct: 169 DCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPR 228

Query: 404 SDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMA 463
           S+DEREMC+RTIYCTNIDKKV+QA+V+ FFES CGEV RLRLLGD  HSTRIAFVEF +A
Sbjct: 229 SEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALA 288

Query: 464 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 491
           +SA++ALNCSG+V+GS PIRVSPSKTPVRPR  R
Sbjct: 289 DSALSALNCSGMVVGSQPIRVSPSKTPVRPRITR 322

[Close]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot
Match: Q9C8M0 (Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3702 GN=CID8 PE=1 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.3e-85
Identity = 164/271 (60.52%), Postives = 207/271 (76.38%), Query Frame = 0


Query: 225 MRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNN---SR 284
           M+ L  +  KLNP A+EF  PS  +N            ++DF++    +  +      +R
Sbjct: 50  MKKLVAMFKKLNPEAKEFF-PSYKRN---------TNQSDDFVIAIKPSGEDNKKVAINR 109

Query: 285 RKKNGFSQGRR-RMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRI 344
           R++N ++QGRR R+  + +  +R++  RRTVYVSDIDQ VTEE LA +F+SCG+VVDCRI
Sbjct: 110 RRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 169

Query: 345 CGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDE 404
           CGDPNS+L FAF+EF+D++GAR++L+L GT++G+YPVRVLPSKTAI PVNP FLPRS+DE
Sbjct: 170 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 229

Query: 405 REMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAI 464
           REMCSRTIYCTN+DK  T+ +V  FF+S CGEV RLRLLGD  HSTRIAFVEF MAESA+
Sbjct: 230 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 289

Query: 465 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRA 492
           AALNCSG+VLGS PIRVSPSKTPVR R  R+
Sbjct: 290 AALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310

[Close]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL
Match: A0A0A0KZ10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1)

HSP 1 Score: 741.1 bits (1912), Expect = 3.0e-210
Identity = 379/403 (94.04%), Postives = 388/403 (96.28%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ+RAAAATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL
Match: A0A1S3CI01 (polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=LOC103501175 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 8.7e-210
Identity = 378/403 (93.80%), Postives = 387/403 (96.03%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ+RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQDRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL
Match: A0A5D3BZR3 (Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold351G00260 PE=4 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 1.5e-209
Identity = 378/403 (93.80%), Postives = 386/403 (95.78%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQTL+NT++SSDSNDP  VENQKP NDSTLP+NA+SDFHPN NDQN
Sbjct: 1   MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQM-GQMQNGFETNGQSLMVKSASGYGMNQMPNGV 212
           +QKK HLQ RA AATSFSLPSPNF  QM GQMQNGFETN QSLMV SAS YGMNQ PNGV
Sbjct: 61  LQKKVHLQHRAGAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120

Query: 213 INGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQAN 272
           INGADGG+ FKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYF+GAGLGYTNDFLLQ N
Sbjct: 121 INGADGGDTFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFTGAGLGYTNDFLLQPN 180

Query: 273 SANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 332
           S NNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS
Sbjct: 181 SVNNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFAS 240

Query: 333 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 392
           CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP
Sbjct: 241 CGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP 300

Query: 393 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 452
           DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV
Sbjct: 301 DFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFV 360

Query: 453 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 EFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403

[Close]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL
Match: A0A6J1JC04 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661 GN=LOC111483053 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.9e-209
Identity = 375/402 (93.28%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQ+ ENTMLSSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMLSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 212
            QKK HLQERAAAA SF+LPSPNF +QMGQMQNGFETN QSLMVKSA GYGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAAASFALPSPNFKSQMGQMQNGFETNAQSLMVKSAGGYGMNQRPNGVI 120

Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 272
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 273 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 332
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 333 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 392
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 393 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 452
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 453 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL
Match: A0A6J1E992 (polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=3662 GN=LOC111430559 PE=4 SV=1)

HSP 1 Score: 738.4 bits (1905), Expect = 1.9e-209
Identity = 375/402 (93.28%), Postives = 386/402 (96.02%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSNDPKDVENQKPKNDSTLPMNAESDFHPNANDQN 152
           MAVAENVGPKIGSPSQ+ ENTM+SSDSNDPKDVENQKPKNDS + +NAE DFHPN  DQN
Sbjct: 1   MAVAENVGPKIGSPSQSFENTMVSSDSNDPKDVENQKPKNDSAVSINAEPDFHPNGIDQN 60

Query: 153 IQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVI 212
            QKK HLQERAAAATSF+LPSPNF AQMGQMQNGFETN QSLMVKSA+ YGMNQ PNGVI
Sbjct: 61  TQKKAHLQERAAAATSFALPSPNFKAQMGQMQNGFETNAQSLMVKSAAAYGMNQRPNGVI 120

Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANS 272
           NGADGGENFKRDMRDLE+LLSKLNPMAEEFVPPSLAKNFSGYF GA LGYTNDFLLQANS
Sbjct: 121 NGADGGENFKRDMRDLEDLLSKLNPMAEEFVPPSLAKNFSGYFGGAALGYTNDFLLQANS 180

Query: 273 ANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASC 332
            NNEGNN+RRKKNGFSQGRR+ NNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFA+C
Sbjct: 181 LNNEGNNNRRKKNGFSQGRRKTNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFANC 240

Query: 333 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPD 392
           GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNP+
Sbjct: 241 GEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPE 300

Query: 393 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 452
           FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE
Sbjct: 301 FLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVE 360

Query: 453 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 495
           FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN
Sbjct: 361 FTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 402

[Close]

BLAST of ClCG07G017440 vs. TAIR 10
Match: AT1G32790.1 (CTC-interacting domain 11 )

HSP 1 Score: 406.4 bits (1043), Expect = 3.3e-113
Identity = 207/284 (72.89%), Postives = 236/284 (83.10%), Query Frame = 0


Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 272
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 273 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 332
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 333 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 392
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 393 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 452
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 453 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 491
           RIAFVEF MAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 354

[Close]

BLAST of ClCG07G017440 vs. TAIR 10
Match: AT4G10610.1 (CTC-interacting domain 12 )

HSP 1 Score: 392.9 bits (1008), Expect = 3.8e-109
Identity = 207/325 (63.69%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 171 LPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMPNGVINGADGGENFKRDMRDLEE 230
           L SP+  + +   ++G  +N          G G++      +  +DGGE+FKRDMR+L E
Sbjct: 18  LISPSPPSSVTSQESGASSNNDH------GGNGIHDEIGVHVARSDGGESFKRDMRELHE 77

Query: 231 LLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLLQANSANNEGNNSRRKKNGFSQG 290
           LLSKLNPMA+EF+PPSL K     F+G      N F+   N   NE  + RRKK+   QG
Sbjct: 78  LLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNEDGSFRRKKSFGQQG 137

Query: 291 RRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVFASCGEVVDCRICGDPNSILHF 350
           +RRMN + +  +R+E+ RRTVYVSDIDQQVTEE LA +F   G+VVDCRICGDPNS+L F
Sbjct: 138 KRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRF 197

Query: 351 AFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPVNPDFLPRSDDEREMCSRTIYC 410
           AFIEFTDE GAR +LNLSGT+LGFYPV+V+PSKTAIAPVNP FLPR++DEREMC+RTIYC
Sbjct: 198 AFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYC 257

Query: 411 TNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIAALNCSGVVL 470
           TNIDKK+TQ ++KLFFES+CGEV RLRLLGDYHH TRI FVEF MAESAIAALNCSGV+L
Sbjct: 258 TNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLL 317

Query: 471 GSLPIRVSPSKTPVRPRS-PRAQLN 495
           GSLPIRVSPSKTPVR R+ PR Q++
Sbjct: 318 GSLPIRVSPSKTPVRSRAIPRHQMH 336

[Close]

BLAST of ClCG07G017440 vs. TAIR 10
Match: AT3G49390.1 (CTC-interacting domain 10 )

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-106
Identity = 219/404 (54.21%), Postives = 276/404 (68.32%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 152
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 153 NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 212
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 213 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 272
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 273 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 332
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 333 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 392
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 393 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 452
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 453 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 493
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of ClCG07G017440 vs. TAIR 10
Match: AT3G49390.2 (CTC-interacting domain 10 )

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-106
Identity = 219/404 (54.21%), Postives = 276/404 (68.32%), Query Frame = 0


Query: 93  MAVAENVGPKIGSPSQTLENTMLSSDSND----PKDVENQKPKNDSTLPMNAESDFHPNA 152
           MAVAEN G K+ S  Q L+N   ++ + +    P   ++Q PK+DS+ P+  +S   P  
Sbjct: 1   MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDST--PET 60

Query: 153 NDQNIQKKPHLQERAAAATSFSLPSPNFNAQMGQMQNGFETNGQSLMVKSASGYGMNQMP 212
           +D+                       N  AQ  Q  NGF  NG+             +  
Sbjct: 61  DDR----------------------INETAQKVQTLNGFSGNGE-------------RDN 120

Query: 213 NGVINGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKNFSGYFSGAGLGYTNDFLL 272
           NG             +++DL +  SKLNPMA+EFVPPSLA++ SG     GLG+TN+F  
Sbjct: 121 NG-------------EIKDLADAFSKLNPMAQEFVPPSLARSQSGVLRN-GLGFTNNFAA 180

Query: 273 QANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATV 332
               A+   +  RR+++ F QG+RRMN + +  ++D++ RRTVYVSDIDQQVTEE LA V
Sbjct: 181 PPKLADGNDHFPRRRRS-FGQGKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGV 240

Query: 333 FASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAP 392
           F +CG+VVDCR+CGDPNS+L FAFIEFT+EEGARA+L++SGTVLGFYP++VLPSKTAIAP
Sbjct: 241 FINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAP 300

Query: 393 VNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRI 452
           VNP FLPRS+DEREMC RT+YCTNIDK++TQ ++K FFE LCGEV RLR LGDYHH TRI
Sbjct: 301 VNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRI 351

Query: 453 AFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQ 493
           AFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP  PRA+
Sbjct: 361 AFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPRAE 351

[Close]

BLAST of ClCG07G017440 vs. TAIR 10
Match: AT1G32790.2 (CTC-interacting domain 11 )

HSP 1 Score: 380.2 bits (975), Expect = 2.6e-105
Identity = 194/272 (71.32%), Postives = 223/272 (81.99%), Query Frame = 0


Query: 213 NGADGGENFKRDMRDLEELLSKLNPMAEEFVPPSLAKN-----FSGYFSGAGLGYTND-F 272
           +G DGGE+FKRDMR+L+EL SKLNPMAEEFVPPSL K        G+F+ AG  + N+ F
Sbjct: 71  DGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGF 130

Query: 273 LLQANSANNEGNNSRRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLA 332
               N      N   R+K  F QG+RRMN + +  +R+++ RRTVYVSD+DQQVTEE LA
Sbjct: 131 AGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLA 190

Query: 333 TVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAI 392
            +F SCG+VVDCRICGDPNS+L FAFIEFTDEEGA  +LNLSGT+LGFYPV+VLPSKTAI
Sbjct: 191 GLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAI 250

Query: 393 APVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHST 452
           APVNP FLPR++DEREMC+RTIYCTNIDKKVTQ++VK+FFES CGEV RLRLLGDY HST
Sbjct: 251 APVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHST 310

Query: 453 RIAFVEFTMAESAIAALNCSGVVLGSLPIRVS 479
           RIAFVEF MAESAIAALNCSGVVLGSLPIR S
Sbjct: 311 RIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342

The following BLAST results are available for this feature:

BLAST of ClCG07G017440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900938.1	2.3e-217	97.01	polyadenylate-binding protein-interacting protein 12 [Benincasa hispida]	[more]
XP_004137206.1	6.2e-210	94.04	polyadenylate-binding protein-interacting protein 12 [Cucumis sativus] >XP_01165...	[more]
XP_008462907.1	1.8e-209	93.80	PREDICTED: polyadenylate-binding protein-interacting protein 12 [Cucumis melo]	[more]
TYK04620.1	3.1e-209	93.80	polyadenylate-binding protein-interacting protein 12 [Cucumis melo var. makuwa]	[more]
XP_022984928.1	4.0e-209	93.28	polyadenylate-binding protein-interacting protein 12 [Cucurbita maxima] >XP_0229...	[more]

BLAST of ClCG07G017440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPI5	4.7e-112	72.89	Polyadenylate-binding protein-interacting protein 11 OS=Arabidopsis thaliana OX=...	[more]
Q9S7N9	5.4e-108	63.69	Polyadenylate-binding protein-interacting protein 12 OS=Arabidopsis thaliana OX=...	[more]
Q9SG10	2.5e-105	54.21	Polyadenylate-binding protein-interacting protein 10 OS=Arabidopsis thaliana OX=...	[more]
Q9LRR6	7.6e-86	60.22	Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q9C8M0	1.3e-85	60.52	Polyadenylate-binding protein-interacting protein 8 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of ClCG07G017440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ10	3.0e-210	94.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G090360 PE=4 SV=1	[more]
A0A1S3CI01	8.7e-210	93.80	polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo OX=3656 GN=...	[more]
A0A5D3BZR3	1.5e-209	93.80	Polyadenylate-binding protein-interacting protein 12 OS=Cucumis melo var. makuwa...	[more]
A0A6J1JC04	1.9e-209	93.28	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita maxima OX=3661...	[more]
A0A6J1E992	1.9e-209	93.28	polyadenylate-binding protein-interacting protein 12 OS=Cucurbita moschata OX=36...	[more]

BLAST of ClCG07G017440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32790.1	3.3e-113	72.89	CTC-interacting domain 11	[more]
AT4G10610.1	3.8e-109	63.69	CTC-interacting domain 12	[more]
AT3G49390.1	1.8e-106	54.21	CTC-interacting domain 10	[more]
AT3G49390.2	1.8e-106	54.21	CTC-interacting domain 10	[more]
AT1G32790.2	2.6e-105	71.32	CTC-interacting domain 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 407..478 e-value: 1.9E-11 score: 54.1 coord: 310..380 e-value: 5.3E-13 score: 59.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 311..373 e-value: 2.7E-10 score: 39.9 coord: 408..475 e-value: 8.2E-9 score: 35.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 406..482 score: 11.929285
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 309..384 score: 13.20844
IPR009818	Ataxin-2, C-terminal	PFAM	PF07145	PAM2	coord: 233..246 e-value: 4.3E-5 score: 22.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 392..490 e-value: 5.1E-14 score: 54.5 coord: 268..386 e-value: 1.1E-17 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..151
None	No IPR available	PANTHER	PTHR32343:SF36	POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 12-LIKE	coord: 93..494
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 93..494
IPR034823	CID8-like protein, RNA recognition motif 1	CDD	cd12459	RRM1_CID8_like	coord: 308..386 e-value: 9.99422E-50 score: 162.976
IPR034825	CID8-like protein, RNA recognition motif 2	CDD	cd12460	RRM2_CID8_like	coord: 402..483 e-value: 1.47067E-59 score: 188.859
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 395..488
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 277..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG07G017440.2	ClCG07G017440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding