ClCG07G016740 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG07G016740
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionAconitate hydratase
LocationCG_Chr07: 33268639 .. 33270696 (-)
RNA-Seq ExpressionClCG07G016740
SyntenyClCG07G016740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAGAGTGTATGATTTGAGTGAATGGGTTTGAAGAGAGAGTCCATCTTTTTAAGCCTTATGCTTCTTCTCCTTTTCCATATGGCAACAGGGAGACTCATCCAAAACACTTCACCTTATGCAGATTGTAAGTCCTATTTCTCTTTTTCTTTTTTTCTTGGACAGATATGAAACATAATTTTACCCTAATAATAATAATCACTCAGATTTAAAAATAAATAATTCCAGGATATGTATGCAGCTTTCGAATTATGATAAATTATCACGGTGCATTGCCTGCTTAGCCTTTCTGTTCATGTTAAAGTTTTGAAAAAAAAAAAAATTCTATATTTAAAAGATGAAGAAACACCAATATCAGTAATATTAATCTATCAACAATGACGACAAACTTGGAATTAAATTAAATTCATACTGATATTTTTTCAAAAAGAAAAAAATTCAAAGAATAAAATTAACCTAAACCAATCGAAAAGTCGGTTTGCACTCTTCAATAGTTGAGATTGGTTTGAATATTTACTAAATTGATCATAGTTGATTTAGTAGTGGTTTAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCCAACAGACCACTGCACTCCACACTAACCCTAATTTTACCAAAGTTCATCCAACAAAAAAATCAGAGATTTAGTAGAAACGAGTCAAATGAATGATCTTAAAATTGAATAGGAGACCAATCAAGACATAGTAATTGGGTGAAAAATGTCTACAAGATATTTCTACAATATTTGTATAACATTGTCAATTTTAGATGACATAAGATATTTAAGACTTTTATATTTTTGAACTACCCAAGAAGTCTCATGTCAATATGGTAGAAAATTTATATCAAAAGTTCGAAATTTTGGTACACAGAAATGTCGTTTTTCTTCGTTTGGATAAAATTTCAAAATTTTGAAAAAAATTATTTAAAAAATAGAAATTAAAAATAAAATCATTATCAAAACAAGGCTTAAACTTTAAATTCTGTGTCAGGTAGATCACTAGATTTTAAAATATTGAAATAGGTCAAAGACATAATTAAAACATAAATAAAATGTTGAGAAATTTTTTTTTTTTTTTTTTTTTGTTATATCTCAAATTTGGCTTCTTTTTTAGAAAAAAAAATAATAATAATAATTATCAAACAAATCTATTTATTAAAAATGTATGTAAAAACAAAAACTTTATGAAAAGGTCCTTTATTTTCTCGACATTTGGATCAGCCCAGGGCATGGTCATATCCCACAGAGTCAATCATGGCTGCAGACAAATTTTGGCATTGTTAATGCCGGTGGGTTTGGTGTAGAATTGATGTCCACCTCAGTGGTTGACTCCCAAGTCTATTCTGCTGATTATAATTTATTAAATGCACCAAAAGATAAAATTCCACTGTTCTTAATTTTTGTTAAGCATCTCAACTTTTTTATATTCGTGTAAAGATTTAACATTTTTAAGAGAAATAAACATGTTAGTTTTAATTTATTCTTACATTCTTTAAAGAATAACATAAATGGCAACAGGGAGACTCATCCATACCCATACTACTTTGCTTCAACCAAATTGTAATCCCTATATCCCTTCTATTTTCTAATTTCTTTATGTTAATTCTCTCTCTATCAATCCCAAAATTTTATTGCATGTTTTACCGGTTGATTTAGAGAATGATTTCCATTTTCAATATCACTTTGAAAAACTTGTTTCTTTCTTAGTAATCTAAAATTAACGATGTGTATATTATGTTTAGATGCAGCTTAGGCTACATTTAACCATTGCGAGTTCTATTCCATTCTAACATGAGTTACATTTTATAAGTATAATATTTTTCATTCTAAATATTGAAACGAGCAAACTAGACCTTAAATTTAGTTGTTGATGAGTTATGTTTTATGGTAACAGTTGAGACTATGAATATAGATGGGAAGAATAGGGTAGAGAGTCAGCTTCTGAGTTCAGCTCTGCCTAGAGGTGGTAACTATATTGACAACCCGCAGGCGGCAAGGAAGGTCGCGGTCCGTCGCTCCGGCTACCGGCCATGA

mRNA sequence

AAGAGAGTGTATGATTTGAGTGAATGGGTTTGAAGAGAGAGTCCATCTTTTTAAGCCTTATGCTTCTTCTCCTTTTCCATATGGCAACAGGGAGACTCATCCAAAACACTTCACCTTATGCAGATTGGCATGGTCATATCCCACAGAGTCAATCATGGCTGCAGACAAATTTTGGCATTGTTAATGCCGGTGGGTTTGGTGTAGAATTGATGTCCACCTCAGTGGTTGACTCCCAAACCTTAAATTTAGTTGTTGATGAGTTATGTTTTATGGTAACAGTTGAGACTATGAATATAGATGGGAAGAATAGGGTAGAGAGTCAGCTTCTGAGTTCAGCTCTGCCTAGAGGTGGTAACTATATTGACAACCCGCAGGCGGCAAGGAAGGTCGCGGTCCGTCGCTCCGGCTACCGGCCATGA

Coding sequence (CDS)

ATGGGTTTGAAGAGAGAGTCCATCTTTTTAAGCCTTATGCTTCTTCTCCTTTTCCATATGGCAACAGGGAGACTCATCCAAAACACTTCACCTTATGCAGATTGGCATGGTCATATCCCACAGAGTCAATCATGGCTGCAGACAAATTTTGGCATTGTTAATGCCGGTGGGTTTGGTGTAGAATTGATGTCCACCTCAGTGGTTGACTCCCAAACCTTAAATTTAGTTGTTGATGAGTTATGTTTTATGGTAACAGTTGAGACTATGAATATAGATGGGAAGAATAGGGTAGAGAGTCAGCTTCTGAGTTCAGCTCTGCCTAGAGGTGGTAACTATATTGACAACCCGCAGGCGGCAAGGAAGGTCGCGGTCCGTCGCTCCGGCTACCGGCCATGA

Protein sequence

MGLKRESIFLSLMLLLLFHMATGRLIQNTSPYADWHGHIPQSQSWLQTNFGIVNAGGFGVELMSTSVVDSQTLNLVVDELCFMVTVETMNIDGKNRVESQLLSSALPRGGNYIDNPQAARKVAVRRSGYRP
Homology
[Close]
BLAST of ClCG07G016740 vs. NCBI nr
Match: KGN53132.1 (hypothetical protein Csa_014795 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-11
Identity = 57/133 (42.86%), Postives = 67/133 (50.38%), Query Frame = 0 

Query: 1   MGLKRESIFLSLMLLLLF-HMATGR-LIQNTSPYADWHGHIPQSQSWLQTNFGIVNAGGF 60
           MGLKRESIF S+MLLLL  +MATGR L  +TS +AD+                       
Sbjct: 1   MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADF----------------------- 60

Query: 61  GVELMSTSVVDSQTLNLVVDELCFMVTVETMNIDGKNRVESQLLSSALPRGGNYIDNPQA 120
                                       ETMN+DGKNR  S+ LSSALPRGGNYI+ P A
Sbjct: 61  ----------------------------ETMNMDGKNRDGSRFLSSALPRGGNYINKPHA 82

Query: 121 ARKVAVRRSGYRP 132
           A K AV R+GY+P
Sbjct: 121 AEKAAVGRAGYQP 82

[Close]
BLAST of ClCG07G016740 vs. NCBI nr
Match: KAG6600180.1 (hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-10
Identity = 51/132 (38.64%), Postives = 63/132 (47.73%), Query Frame = 0 

Query: 1   MGLKRESIFLSLMLLLLFHMATGRLIQNTS-PYADWHGHIPQSQSWLQTNFGIVNAGGFG 60
           MGLKR  I LS+M+L+L HMATGR ++ T+ P AD+                        
Sbjct: 1   MGLKRAPILLSVMVLVLVHMATGRPVRTTTLPIADF------------------------ 60

Query: 61  VELMSTSVVDSQTLNLVVDELCFMVTVETMNIDGKNRVESQLLSSALPRGGNYIDNPQAA 120
                                      ETMN+ G+    +QLLSSA PRGGNYIDNPQAA
Sbjct: 61  ---------------------------ETMNMSGETAFGTQLLSSARPRGGNYIDNPQAA 81

Query: 121 RKVAVRRSGYRP 132
            K A++ SGY P
Sbjct: 121 NKAAIQTSGYHP 81

[Close]
BLAST of ClCG07G016740 vs. NCBI nr
Match: KAA0044639.1 (Aconitate hydratase [Cucumis melo var. makuwa] >TYK16949.1 Aconitate hydratase [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 6.6e-10
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 87  ETMNIDGKNRVESQLLSSALPRGGNYIDNPQAARKVAVRRSGYRP 132
           ETMN+DGKNR  S+LLS+ALPRGGNYI+NP AA K AVRRSGY+P
Sbjct: 17  ETMNMDGKNRDGSRLLSTALPRGGNYINNPHAAEKAAVRRSGYQP 61

[Close]
BLAST of ClCG07G016740 vs. ExPASy TrEMBL
Match: A0A0A0KXI8 (Aconitate hydratase OS=Cucumis sativus OX=3659 GN=Csa_4G017200 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.9e-12
Identity = 57/133 (42.86%), Postives = 67/133 (50.38%), Query Frame = 0 

Query: 1   MGLKRESIFLSLMLLLLF-HMATGR-LIQNTSPYADWHGHIPQSQSWLQTNFGIVNAGGF 60
           MGLKRESIF S+MLLLL  +MATGR L  +TS +AD+                       
Sbjct: 1   MGLKRESIFFSVMLLLLLSNMATGRVLFHSTSLHADF----------------------- 60

Query: 61  GVELMSTSVVDSQTLNLVVDELCFMVTVETMNIDGKNRVESQLLSSALPRGGNYIDNPQA 120
                                       ETMN+DGKNR  S+ LSSALPRGGNYI+ P A
Sbjct: 61  ----------------------------ETMNMDGKNRDGSRFLSSALPRGGNYINKPHA 82

Query: 121 ARKVAVRRSGYRP 132
           A K AV R+GY+P
Sbjct: 121 AEKAAVGRAGYQP 82

[Close]
BLAST of ClCG07G016740 vs. ExPASy TrEMBL
Match: A0A5A7TTS9 (Aconitate hydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G00860 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.2e-10
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 0 

Query: 87  ETMNIDGKNRVESQLLSSALPRGGNYIDNPQAARKVAVRRSGYRP 132
           ETMN+DGKNR  S+LLS+ALPRGGNYI+NP AA K AVRRSGY+P
Sbjct: 17  ETMNMDGKNRDGSRLLSTALPRGGNYINNPHAAEKAAVRRSGYQP 61

The following BLAST results are available for this feature:
BLAST of ClCG07G016740 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53132.12.0e-1142.86hypothetical protein Csa_014795 [Cucumis sativus][more]
KAG6600180.11.7e-1038.64hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0044639.16.6e-1077.78Aconitate hydratase [Cucumis melo var. makuwa] >TYK16949.1 Aconitate hydratase [... [more]
BLAST of ClCG07G016740 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG07G016740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXI89.9e-1242.86Aconitate hydratase OS=Cucumis sativus OX=3659 GN=Csa_4G017200 PE=4 SV=1[more]
A0A5A7TTS93.2e-1077.78Aconitate hydratase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G... [more]
BLAST of ClCG07G016740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG07G016740.2ClCG07G016740.2mRNA