ClCG07G016403 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGAAGTTTCGATTTCAAGGAGTCTTTGCCTTTCGGTGTCGGTAATGGCAATGGCGATTGTGGCGCTTATCACCGGAGTTCGACTGGCAGACGCAGTGAATTGTAACCCTATGGAGATGAGAGCATGTCTTCCTGCATTCGAATCGTCAGATCCGCCGACAGCTGAATGCTGTGAGAAAGTGAAGGAGCAACAGCCATGCTTTTGTGCATACCTCAAAAGTCCAATATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATCGGTTCTTCTTGTGGCGTTTCCTTTCCCGCCTGCTAG ATGAAGGAAGTTTCGATTTCAAGGAGTCTTTGCCTTTCGGTGTCGGTAATGGCAATGGCGATTGTGGCGCTTATCACCGGAGTTCGACTGGCAGACGCAGTGAATTGTAACCCTATGGAGATGAGAGCATGTCTTCCTGCATTCGAATCGTCAGATCCGCCGACAGCTGAATGCTGTGAGAAAGTGAAGGAGCAACAGCCATGCTTTTGTGCATACCTCAAAAGTCCAATATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATCGGTTCTTCTTGTGGCGTTTCCTTTCCCGCCTGCTAG ATGAAGGAAGTTTCGATTTCAAGGAGTCTTTGCCTTTCGGTGTCGGTAATGGCAATGGCGATTGTGGCGCTTATCACCGGAGTTCGACTGGCAGACGCAGTGAATTGTAACCCTATGGAGATGAGAGCATGTCTTCCTGCATTCGAATCGTCAGATCCGCCGACAGCTGAATGCTGTGAGAAAGTGAAGGAGCAACAGCCATGCTTTTGTGCATACCTCAAAAGTCCAATATTTAAGCCTTATTTAGAATCTCCCAATGCTAAAAAGATCGGTTCTTCTTGTGGCGTTTCCTTTCCCGCCTGCTAG MKEVSISRSLCLSVSVMAMAIVALITGVRLADAVNCNPMEMRACLPAFESSDPPTAECCEKVKEQQPCFCAYLKSPIFKPYLESPNAKKIGSSCGVSFPAC Homology
BLAST of ClCG07G016403 vs. NCBI nr
Match: KGN53815.1 (hypothetical protein Csa_014873 [Cucumis sativus]) HSP 1 Score: 164.5 bits (415), Expect = 4.9e-37 Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of ClCG07G016403 vs. NCBI nr
Match: KAA0064159.1 (non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa] >TYK02870.1 non-specific lipid-transfer protein 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of ClCG07G016403 vs. NCBI nr
Match: KAG6581740.1 (hypothetical protein SDJN03_21742, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581742.1 hypothetical protein SDJN03_21744, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581745.1 hypothetical protein SDJN03_21747, partial [Cucurbita argyrosperma subsp. sororia] >KAG6581746.1 hypothetical protein SDJN03_21748, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 137.1 bits (344), Expect = 8.3e-29 Identity = 66/96 (68.75%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of ClCG07G016403 vs. NCBI nr
Match: XP_023527041.1 (non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 133.7 bits (335), Expect = 9.2e-28 Identity = 64/96 (66.67%), Postives = 78/96 (81.25%), Query Frame = 0
BLAST of ClCG07G016403 vs. NCBI nr
Match: KAB2611859.1 (non-specific lipid-transfer protein 2-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 114.8 bits (286), Expect = 4.4e-22 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.0e-17 Identity = 41/88 (46.59%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 4.2e-15 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 7.8e-14 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 1.9e-12 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy Swiss-Prot
Match: Q10ST8 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=LTP-2 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.5e-12 Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy TrEMBL
Match: A0A0A0KW09 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G141230 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37 Identity = 82/102 (80.39%), Postives = 88/102 (86.27%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy TrEMBL
Match: A0A5A7VF50 (Non-specific lipid-transfer protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00770 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.8e-36 Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy TrEMBL
Match: A0A5N5G8U2 (Non-specific lipid-transfer protein 2-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_019891 PE=3 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 2.1e-22 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy TrEMBL
Match: A0A6A2X1V6 (Non-specific lipid-transfer protein 2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00113338pilonHSYRG00091 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.8e-21 Identity = 48/90 (53.33%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of ClCG07G016403 vs. ExPASy TrEMBL
Match: A5JUZ7 (Lipid transfer protein OS=Sesamum indicum OX=4182 GN=LTP1 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.4e-21 Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 0
BLAST of ClCG07G016403 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20 Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of ClCG07G016403 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 38/88 (43.18%), Postives = 58/88 (65.91%), Query Frame = 0
BLAST of ClCG07G016403 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 78.6 bits (192), Expect = 3.3e-15 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 0
BLAST of ClCG07G016403 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 8.0e-14 Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0
BLAST of ClCG07G016403 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 73.9 bits (180), Expect = 8.0e-14 Identity = 25/68 (36.76%), Postives = 46/68 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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