ClCG07G016393 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAATGGAGAAATTAATAAAAGAGGTGGCCCTTTTTTCCACACTTCCAACTTTATGTGGTTATAAATACAACAAAAAAAAGAGTTGGGTTTACACACAAAGCCATTCATTCCTCTTTCTTTTTTCTTTTGCCTTCAGACACAATGAAGAAAGTTGGTCCGGTGAGAGTTATTTGTATTTTCGTGGCGGCAATGGCTGTTTTTCTCAGCGGAGCTCGTGTGGCGGAGGCGGTGACTTGCAGCCCTTCGGAGCTGAGCTCATGTGCGGGGGCAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAACAACCATGCCTTTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCTTCCCCAGCTGCTAG ATGAAAAATGGAGAAATTAATAAAAGAGACACAATGAAGAAAGTTGGTCCGGTGAGAGTTATTTGTATTTTCGTGGCGGCAATGGCTGTTTTTCTCAGCGGAGCTCGTGTGGCGGAGGCGGTGACTTGCAGCCCTTCGGAGCTGAGCTCATGTGCGGGGGCAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAACAACCATGCCTTTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCTTCCCCAGCTGCTAG ATGAAAAATGGAGAAATTAATAAAAGAGACACAATGAAGAAAGTTGGTCCGGTGAGAGTTATTTGTATTTTCGTGGCGGCAATGGCTGTTTTTCTCAGCGGAGCTCGTGTGGCGGAGGCGGTGACTTGCAGCCCTTCGGAGCTGAGCTCATGTGCGGGGGCAATCTGGTCGTCATCGTCGAATCCATCGAGCTTTTGCTGCAGTAAGTTGAGAGAGCAACAACCATGCCTTTGTGGGTACATAAGGAACCCATCCTTAAGGCCTTATGTGCAATCTCCTGGCGCTAAATCTGTGGCTTCCAAGTGTGGTGTTCCCTTCCCCAGCTGCTAG MKNGEINKRDTMKKVGPVRVICIFVAAMAVFLSGARVAEAVTCSPSELSSCAGAIWSSSSNPSSFCCSKLREQQPCLCGYIRNPSLRPYVQSPGAKSVASKCGVPFPSC Homology
BLAST of ClCG07G016393 vs. NCBI nr
Match: XP_038897809.1 (non-specific lipid-transfer protein 2-like [Benincasa hispida]) HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31 Identity = 73/98 (74.49%), Postives = 84/98 (85.71%), Query Frame = 0
BLAST of ClCG07G016393 vs. NCBI nr
Match: KAG6581748.1 (hypothetical protein SDJN03_21750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 144.4 bits (363), Expect = 5.6e-31 Identity = 73/98 (74.49%), Postives = 84/98 (85.71%), Query Frame = 0
BLAST of ClCG07G016393 vs. NCBI nr
Match: XP_022955426.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata]) HSP 1 Score: 144.1 bits (362), Expect = 7.3e-31 Identity = 73/98 (74.49%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of ClCG07G016393 vs. NCBI nr
Match: XP_022143278.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 132.1 bits (331), Expect = 2.9e-27 Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of ClCG07G016393 vs. NCBI nr
Match: XP_022148226.1 (non-specific lipid-transfer protein 2-like [Momordica charantia]) HSP 1 Score: 120.6 bits (301), Expect = 8.7e-24 Identity = 61/87 (70.11%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 7.6e-23 Identity = 55/99 (55.56%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.1e-18 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.5e-14 Identity = 35/63 (55.56%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy Swiss-Prot
Match: P20145 (Probable non-specific lipid-transfer protein OS=Hordeum vulgare OX=4513 GN=LTP2 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.7e-12 Identity = 38/98 (38.78%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 4.3e-10 Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy TrEMBL
Match: A0A6J1GTR0 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111457455 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 3.6e-31 Identity = 73/98 (74.49%), Postives = 83/98 (84.69%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy TrEMBL
Match: A0A6J1CQB8 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111013188 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.4e-27 Identity = 66/96 (68.75%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy TrEMBL
Match: A0A6J1D4R3 (non-specific lipid-transfer protein 2-like OS=Momordica charantia OX=3673 GN=LOC111016938 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.2e-24 Identity = 61/87 (70.11%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy TrEMBL
Match: A0A5N5N2V7 (AAI domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_005920 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.6e-23 Identity = 55/85 (64.71%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of ClCG07G016393 vs. ExPASy TrEMBL
Match: A0A6A1VEE6 (Putative non-specific lipid-transfer protein AKCS9 OS=Morella rubra OX=262757 GN=CJ030_MR6G021571 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23 Identity = 58/98 (59.18%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of ClCG07G016393 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 104.8 bits (260), Expect = 4.6e-23 Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 0
BLAST of ClCG07G016393 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 98.6 bits (244), Expect = 3.3e-21 Identity = 48/90 (53.33%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of ClCG07G016393 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 74.3 bits (181), Expect = 6.7e-14 Identity = 37/93 (39.78%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of ClCG07G016393 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 70.9 bits (172), Expect = 7.4e-13 Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 0
BLAST of ClCG07G016393 vs. TAIR 10
Match: AT1G66850.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 4.8e-12 Identity = 35/86 (40.70%), Postives = 47/86 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|