ClCG07G016250 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTTACATCCTAATCTTTTTTAAGTTGAGTTTTAAAATTTATGAAGGAAGGGAATAAAAATAAAAACCCTTACCCCCAAAACCTAAAACCCATCGGCTTCTCAGTTCTCCCCGCCCTCTCTCCGTCTCCTTCAATGCCTCTCCTACTCCAATAGCTTCCGACGGCAAGCGCAGCAGCTCCCTCCTCCCCGAACGCAGTTCCTTCTCCCTCTCGACGCGGTGATTCTCTCCGGCGTTCTTTTCTCCTTCCGGCAATACCCATGAACCCCCTGAATCACGTTACCCGTAGTATGTAGAATCCAGATCAGCGATTTTCATACCATTCGAACCTGAACGTCGTTGGGTACCCAAGCCTTTTCCATAAGGTTTCTTGATTTTTCGCTTCCCTCTTCATTTCTGAAGTTCACGATATTGCAACTCTCCCTCTCTCTGTTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTTTTGTTGCCACTCACTTCTCTCAGGTTCGGTTTTTTAATGCTTTTTTTTTTTTTTGGCTATTTTTCCCTTTTGTGATTGTGGGTTTCAAAATCTAAGGAGAAATGATGCTTTACGAGTTTCTAATGTAGACAGTGGAAACTCATGGGTACCTATGTAGGTGCTACTTGGATTTATTTACTTTTTCACTCATCTATGTAAGTTTGTTCTCTTTATAGCTTTATTGGCCTTTTTTTGTTCTATTGTAGCTTCAATCACTCCTCCCCACCCATCATTTTCTTTGATTTTCTAAAATTTCTGAATGTCTGGGCTTTATTTGATTTTGTTTGAGAGTTTTTAATGAGTCAATGTGGCAATGTTTCTGAGATTTGGATCTTTTTTCTGTGCTGGTAATGCTTAGAGCTTGAAAGCGAACCACATTTTGGGTTTGATGTGTTGGTGTTTAATTTATGAAGGAATAATTATGCTGTTTGATTGGAAAGATTGGAAGGTGGAAGAGTTGGGGTGAGTTGGGTTGATTTAGTTGAAATAACTAAAACTCCATCAACATTTTATGTTAAAATTGATGATTTTCCCCTTCATGATATGTAGGGGGGAGGGATGGTTATAACTCTATAACAGCTTATGAGCTTAAACTGATTGTGTTCTACAGATCTCTGTCCTAGTTTTTATCTATGTTCAGTTAATTGATCTTAGATTTTTGTATTCCACAGGGATTCTAAATACCACCCTCTTGCGTTTTCGTCTATGACAAGTGACCTTTGATTTTTGTGCTCCTCAGGGATTTTGTTCCATGATTCAACAATTCCCTGATATTGAATTGAAGAAATAATGAAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGTTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCTTCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATCGGTCCCATGCTCGGCGAAAGACTTAGACATCCTAAGCTGCAGGCAATTTCAGTGGATGGCTTGGACACGGGTTCAGAAGGAGGGGCAGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGAGTAAAAAGTTCTAAAGGTTGTAGCTTTTTGTTTATATCTTTCCAACTAGCCAATTCCTTGCTTCAATCACTGAATATTCTTATGTGAGTTGATGTTGCCAGCCAGTTGAGTTTCAAAAAGGACGAAGGACAATAAATCTATTTAGAGTCTTAGACTTGTTTTCCCCTATGCAGTGATTTAGGCCTTTTCTTTTTCTTTCTAGAATATGATATTATAAAACAAGTGCACTAGAGTAAATTCAATTCTACTATTCATAAAGAGAGGGGTAAGGTTCTACTGATGTGTAGCCTTAACTGTTTGAGCGATAAACCTGAATAATAGGTGTGATTTGAGTTTGTCAAAATTAAGTTGTGTTGTATATTTGTTCAGCTTAGCAGCCAAGCTGGTGCAGGTGGTAATAACATAAGCAGAAGATGGAGGTGGTGTAGCTGTGCTTGACGGAGACTCTCTTCAGTTCTTGCATATATGAGAGTGGTTTCATAAGTACCCAAATTTGTTGAGTCGTTGGATTAGATAGTTATTTTGTAAGGTTGGTTGAGGTGCACATAAGCTATAGCATAGACACTCGTCATTAAAAATCATATAAATGATCTTTTTAGGCTAAGTATTTAATTGAACTTTTTTCTAAATTTGCTCATTAATGGATAGTTCTTTAGAGGTTTAAACTTTAAGCTAAATTATGTGAAATACTCTTGTA ATGGAATTCTCCCCGCCCTCTCTCCGTCTCCTTCAATGCCTCTCCTACTCCAATAGCTTCCGACGGCAAGCGCAGCAGCTCCCTCCTCCCCGAACGCAGTTCCTTCTCCCTCTCGACGCGAATCCAGATCAGCGATTTTCATACCATTCGAACCTGAACGTCGTTGGGTACCCAAGCCTTTTCCATAAGTTCACGATATTGCAACTCTCCCTCTCTCTGTTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTTTTGTTGCCACTCACTTCTCTCAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGTTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCTTCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATCGGTCCCATGCTCGGCGAAAGACTTAGACATCCTAAGCTGCAGGCAATTTCAGTGGATGGCTTGGACACGGGTTCAGAAGGAGGGGCAGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGACTTAGCAGCCAAGCTGGTGCAGGTGGTAATAACATAAGCAGAAGATGGAGGTGGTGTAGCTGTGCTTGACGGAGACTCTCTTCAGTTCTTGCATATATGAGAGTGGTTTCATAAGTACCCAAATTTGTTGAGTCGTTGGATTAGATAGTTATTTTGTAAGGTTGGTTGAGGTGCACATAAGCTATAGCATAGACACTCGTCATTAAAAATCATATAAATGATCTTTTTAGGCTAAGTATTTAATTGAACTTTTTTCTAAATTTGCTCATTAATGGATAGTTCTTTAGAGGTTTAAACTTTAAGCTAAATTATGTGAAATACTCTTGTA ATGGAATTCTCCCCGCCCTCTCTCCGTCTCCTTCAATGCCTCTCCTACTCCAATAGCTTCCGACGGCAAGCGCAGCAGCTCCCTCCTCCCCGAACGCAGTTCCTTCTCCCTCTCGACGCGAATCCAGATCAGCGATTTTCATACCATTCGAACCTGAACGTCGTTGGGTACCCAAGCCTTTTCCATAAGTTCACGATATTGCAACTCTCCCTCTCTCTGTTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTTTTGTTGCCACTCACTTCTCTCAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGTTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACCATTTTATGATCCATATGGCCCTAGGCCCCCACCTTCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATCGGTCCCATGCTCGGCGAAAGACTTAGACATCCTAAGCTGCAGGCAATTTCAGTGGATGGCTTGGACACGGGTTCAGAAGGAGGGGCAGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTAAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGACTTAGCAGCCAAGCTGGTGCAGGTGGTAATAACATAA MEFSPPSLRLLQCLSYSNSFRRQAQQLPPPRTQFLLPLDANPDQRFSYHSNLNVVGYPSLFHKFTILQLSLSLLDSAVRRRRAGFVATHFSQLTVVARSLQVRSTLAKIIGLSQVRFFQPDFVPRDPNAKPKRYKYPPFYDPYGPRPPPSNKIIELAERIAALPADERSQIGPMLGERLRHPKLQAISVDGLDTGSEGGAGAGASKVEEKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIEKLKAAGGVAVMDLAAKLVQVVIT Homology
BLAST of ClCG07G016250 vs. NCBI nr
Match: XP_038905834.1 (50S ribosomal protein L7/L12 [Benincasa hispida] >XP_038905841.1 50S ribosomal protein L7/L12 [Benincasa hispida]) HSP 1 Score: 333.2 bits (853), Expect = 2.3e-87 Identity = 175/192 (91.15%), Postives = 183/192 (95.31%), Query Frame = 0
BLAST of ClCG07G016250 vs. NCBI nr
Match: XP_008450561.1 (PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450569.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450588.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450597.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_016902379.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >KAA0047609.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa] >TYK08266.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa]) HSP 1 Score: 329.3 bits (843), Expect = 3.3e-86 Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0
BLAST of ClCG07G016250 vs. NCBI nr
Match: XP_011651634.1 (uncharacterized protein LOC101206962 [Cucumis sativus] >XP_011651635.1 uncharacterized protein LOC101206962 [Cucumis sativus] >KGN58328.1 hypothetical protein Csa_017468 [Cucumis sativus]) HSP 1 Score: 325.5 bits (833), Expect = 4.8e-85 Identity = 170/192 (88.54%), Postives = 179/192 (93.23%), Query Frame = 0
BLAST of ClCG07G016250 vs. NCBI nr
Match: XP_022155073.1 (uncharacterized protein LOC111022207 [Momordica charantia] >XP_022155074.1 uncharacterized protein LOC111022207 [Momordica charantia]) HSP 1 Score: 321.2 bits (822), Expect = 9.0e-84 Identity = 167/192 (86.98%), Postives = 176/192 (91.67%), Query Frame = 0
BLAST of ClCG07G016250 vs. NCBI nr
Match: XP_022998047.1 (uncharacterized protein LOC111492812 [Cucurbita maxima]) HSP 1 Score: 317.8 bits (813), Expect = 1.0e-82 Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy Swiss-Prot
Match: A9BDG4 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=rplL PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-14 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy Swiss-Prot
Match: O22386 (50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL12-2 PE=2 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14 Identity = 52/128 (40.62%), Postives = 75/128 (58.59%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy Swiss-Prot
Match: P41189 (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.5e-14 Identity = 51/132 (38.64%), Postives = 73/132 (55.30%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy Swiss-Prot
Match: Q2JM48 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=rplL PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 6.0e-14 Identity = 52/129 (40.31%), Postives = 71/129 (55.04%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy Swiss-Prot
Match: A2C031 (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus (strain NATL1A) OX=167555 GN=rplL PE=3 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 7.8e-14 Identity = 43/80 (53.75%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy TrEMBL
Match: A0A1S3BPI3 (50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103492120 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.6e-86 Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy TrEMBL
Match: A0A5A7U2A3 (50S ribosomal protein L7/L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00400 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.6e-86 Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy TrEMBL
Match: A0A0A0L907 (Ribosomal_L12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G623960 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 2.3e-85 Identity = 170/192 (88.54%), Postives = 179/192 (93.23%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy TrEMBL
Match: A0A6J1DM08 (uncharacterized protein LOC111022207 OS=Momordica charantia OX=3673 GN=LOC111022207 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 4.4e-84 Identity = 167/192 (86.98%), Postives = 176/192 (91.67%), Query Frame = 0
BLAST of ClCG07G016250 vs. ExPASy TrEMBL
Match: A0A6J1K6S5 (uncharacterized protein LOC111492812 OS=Cucurbita maxima OX=3661 GN=LOC111492812 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 4.8e-83 Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 0
BLAST of ClCG07G016250 vs. TAIR 10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.1e-58 Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 0
BLAST of ClCG07G016250 vs. TAIR 10
Match: AT3G06040.2 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.1e-58 Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 0
BLAST of ClCG07G016250 vs. TAIR 10
Match: AT3G06040.3 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein ) HSP 1 Score: 223.0 bits (567), Expect = 3.1e-58 Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 0
BLAST of ClCG07G016250 vs. TAIR 10
Match: AT1G70190.1 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ) HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26 Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 0
BLAST of ClCG07G016250 vs. TAIR 10
Match: AT1G70190.2 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ) HSP 1 Score: 116.7 bits (291), Expect = 3.2e-26 Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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